BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy12060
         (978 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|328787872|ref|XP_003251020.1| PREDICTED: contactin-like [Apis mellifera]
          Length = 1641

 Score = 1380 bits (3571), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 660/973 (67%), Positives = 799/973 (82%), Gaps = 7/973 (0%)

Query: 8   LFIFVSFHSVFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDL 65
           ++I++  ++ F+Q I  +EL   CPQHW+++++SCYRF+KSP+K R DAK NC++  SDL
Sbjct: 9   IYIYILSYNTFAQNILYEELYQHCPQHWIKFQESCYRFIKSPIKERQDAKRNCEAYQSDL 68

Query: 66  ANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPAD 124
             +N  +EHGFI+YQL WQDPQ RKWY G   Q+ N W+NE D T L  +D AFLPEP D
Sbjct: 69  ITINSLEEHGFILYQLLWQDPQHRKWYTGVKYQNGN-WINEGDNTQLINMDNAFLPEPPD 127

Query: 125 NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPD 184
           +  +DYL YS++ +L+RWG E+VTG E LL+ICEA I  L+ L++DDRTYQYG++I+NP+
Sbjct: 128 SFDKDYLIYSYNNNLQRWGLEKVTGKEKLLYICEAPISNLYNLIDDDRTYQYGIEIDNPN 187

Query: 185 KIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLID 244
           +IPRGPYFIKQPTD VFD+S R I ND++LSC AGGYP P+YEWFKEDY  D+L+A  ID
Sbjct: 188 EIPRGPYFIKQPTDKVFDMSTRKISNDVSLSCLAGGYPTPTYEWFKEDYENDKLIATKID 247

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
           PL++ R+T+SGG LII +P Q EDRGSYHCKA+NKFG+IISESV+L+FG+I EFNLKR+ 
Sbjct: 248 PLNNIRYTVSGGTLIIYEPDQTEDRGSYHCKATNKFGTIISESVELSFGYILEFNLKRSE 307

Query: 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG 364
           E G+QNWGKA++CDPP +YPGV YYWARDYFPNFVEEDKRVFVS DGALYFSALE ID G
Sbjct: 308 ERGDQNWGKAVYCDPPQHYPGVKYYWARDYFPNFVEEDKRVFVSNDGALYFSALEMIDRG 367

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
           NYSCNVQS  SDTGRNGPFFPL+V PHS+FQQLKFPNNFPK FPEAP A ++VRLEC+AF
Sbjct: 368 NYSCNVQSVASDTGRNGPFFPLRVDPHSSFQQLKFPNNFPKAFPEAPIAEEEVRLECIAF 427

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           GYPVPSYNWTRRG+PLPR AY  ++NR+L IP + V+DQGEYICR  NDR ++E+SVT++
Sbjct: 428 GYPVPSYNWTRRGAPLPRGAYTTSYNRVLIIPKIHVDDQGEYICRVYNDRLSIENSVTLT 487

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           IQA PNFTIPL DKHMDN+ +LTWTCEAFG+PDVTYSWFRNGE+LN ETL  ED+DRY I
Sbjct: 488 IQAAPNFTIPLVDKHMDNRGELTWTCEAFGIPDVTYSWFRNGEILNMETLSSEDKDRYSI 547

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           QDNVL+I+ L+PERD AMYQCRAKNQLKTRYSSAQLR+L+LKPSFKKRP+E ETYA E G
Sbjct: 548 QDNVLSIKNLDPERDQAMYQCRAKNQLKTRYSSAQLRILSLKPSFKKRPMEPETYAAEKG 607

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           N+TI CNPEAAP+PKFVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y CTATN +
Sbjct: 608 NITIICNPEAAPRPKFVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYICTATNQY 667

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G DE++GRLIVL GP + E+LP +IT A  +N  LRC    +E+LDVAYIW HNG+RI +
Sbjct: 668 GNDETRGRLIVLRGPQFMEKLPQQITTAVMQNQTLRCIGEIDEMLDVAYIWKHNGLRIRD 727

Query: 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
            DL  +  P +NI+G  L I NA+FA+AGEYEC++KS V +IS+KT V +EGPPG PGGV
Sbjct: 728 EDL--INNPRLNINGEELNIINATFAEAGEYECIIKSAVSEISSKTIVTIEGPPGPPGGV 785

Query: 785 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
           QV  + KTS T++WTDGA NG+PIT Y I ARTNWN TWF + E++   EVDRY GRKEA
Sbjct: 786 QVKNIVKTSTTLRWTDGAFNGKPITMYSISARTNWNHTWFIIIENITAIEVDRYNGRKEA 845

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
            +ENVL P++TYEF+V A NELGY  PSSPSPQY+T  DKP + P  IGGGGGKIGDL+I
Sbjct: 846 YLENVLNPYTTYEFRVSAFNELGYSLPSSPSPQYSTSPDKPMKVPFNIGGGGGKIGDLTI 905

Query: 905 SWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           +W PLP  +QN P IYYK+FWR+K ++TEFQS +LK YGNVG +VV I  ++YYTEYEVK
Sbjct: 906 TWNPLPPSEQNGPGIYYKVFWRRKYHETEFQSLSLKNYGNVGRSVVPIQQQYYYTEYEVK 965

Query: 964 VQAINDVGPGPES 976
           VQA+N +G GP S
Sbjct: 966 VQAVNALGSGPIS 978



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 188/820 (22%), Positives = 299/820 (36%), Gaps = 126/820 (15%)

Query: 221  YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKF 280
            YP   Y W ++ +       N ++   DKR  +S    +     ++ DRG+Y C      
Sbjct: 326  YPGVKYYWARDYF------PNFVE--EDKRVFVSNDGALYFSALEMIDRGNYSCNV---- 373

Query: 281  GSIISESVQLAFGFIGEF-NLKRAPEIGNQ------NWGKAMFCDPPT------------ 321
                 +SV    G  G F  L+  P    Q      N+ KA F + P             
Sbjct: 374  -----QSVASDTGRNGPFFPLRVDPHSSFQQLKFPNNFPKA-FPEAPIAEEEVRLECIAF 427

Query: 322  NYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNG 381
             YP  +Y W R   P           SY+  L    +   D G Y C V +       N 
Sbjct: 428  GYPVPSYNWTRRGAP---LPRGAYTTSYNRVLIIPKIHVDDQGEYICRVYNDRLSI-ENS 483

Query: 382  PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD---KVRLECVAFGYPVPSYNWTRRGS 438
                ++  P           NF  T P   K  D   ++   C AFG P  +Y+W R G 
Sbjct: 484  VTLTIQAAP-----------NF--TIPLVDKHMDNRGELTWTCEAFGIPDVTYSWFRNGE 530

Query: 439  PLPRNAY-------FENFNRILTIPNVKVE-DQGEYICRASNDRSALESSVTISIQA-EP 489
             L            +   + +L+I N+  E DQ  Y CRA N      SS  + I + +P
Sbjct: 531  ILNMETLSSEDKDRYSIQDNVLSIKNLDPERDQAMYQCRAKNQLKTRYSSAQLRILSLKP 590

Query: 490  NFTI-PLT-DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
            +F   P+  + +   + ++T  C     P   + W ++G ++ S         R  ++  
Sbjct: 591  SFKKRPMEPETYAAEKGNITIICNPEAAPRPKFVWKKDGNVIGS------GGRRRILETG 644

Query: 548  VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
             L I  ++ + D   Y C A NQ     +  +L VL      +K P +  T   +   + 
Sbjct: 645  NLIISPVSRD-DEGTYICTATNQYGNDETRGRLIVLRGPQFMEKLPQQITTAVMQNQTLR 703

Query: 608  IFCNPEAAPKPKFVWKKDGNIIGS----GGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
                 +      ++WK +G  I         R       L I   +  ++G Y C   + 
Sbjct: 704  CIGEIDEMLDVAYIWKHNGLRIRDEDLINNPRLNINGEELNIINATFAEAGEYECIIKSA 763

Query: 664  HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-----WTHN 718
                 SK  + +   P     +  K  +     L+    A   + + +  I     W H 
Sbjct: 764  VSEISSKTIVTIEGPPGPPGGVQVKNIVKTSTTLRWTDGAFNGKPITMYSISARTNWNHT 823

Query: 719  G-VRIGNMDLNELETPNINIDGGLLEITN---------ASFADAGEYECVVKSTVGKIST 768
              + I N+   E++  N   +  L  + N         ++F + G       S     S 
Sbjct: 824  WFIIIENITAIEVDRYNGRKEAYLENVLNPYTTYEFRVSAFNELG------YSLPSSPSP 877

Query: 769  KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWF- 824
            + +   + P  +P  +          TI W        NG P  +YK+  R  ++ T F 
Sbjct: 878  QYSTSPDKPMKVPFNIGGGGGKIGDLTITWNPLPPSEQNG-PGIYYKVFWRRKYHETEFQ 936

Query: 825  NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
            ++S    G       GR    I+     ++ YE KV A N LG G P S +    +  D 
Sbjct: 937  SLSLKNYGN-----VGRSVVPIQQQYY-YTEYEVKVQAVNALGSG-PISNAVTIFSAEDM 989

Query: 885  PYQAPSRIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTE----FQSET 937
            P  AP ++         L +SW+P+   REK     I ++I +W++ N  E    + S T
Sbjct: 990  PQVAPQQVVAQSYNSTSLKVSWKPIEETREKIRGKLIGHRIKYWKENNREENAVYYLSRT 1049

Query: 938  LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
             + +    + V   P  +YY    VKV A N  G GPESE
Sbjct: 1050 RRPWA---LVVGLQPDTYYY----VKVMAYNSAGEGPESE 1082


>gi|380021534|ref|XP_003694618.1| PREDICTED: contactin-like [Apis florea]
          Length = 1641

 Score = 1379 bits (3569), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/973 (67%), Positives = 798/973 (82%), Gaps = 7/973 (0%)

Query: 8   LFIFVSFHSVFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDL 65
           ++I +  ++ F+Q I  +EL   CPQHW+++++SCYRF+KSP+K R DAK NC++  SDL
Sbjct: 9   IYIHILSYNTFAQNILYEELYQHCPQHWIKFQESCYRFIKSPIKERQDAKRNCEAYQSDL 68

Query: 66  ANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPAD 124
             +N  +EHGFI+YQL WQDPQ RKWY G   Q+ N W+NE D T L  +D AFLPEP D
Sbjct: 69  VTINSLEEHGFILYQLLWQDPQHRKWYTGVKYQNGN-WINEGDNTQLVNMDNAFLPEPLD 127

Query: 125 NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPD 184
              +DYL YS++ +L+RWG E+VTG E LL+ICEA+I  L+ L++DDRTYQYG++I+NP+
Sbjct: 128 TFDKDYLIYSYNNNLQRWGLEKVTGKEKLLYICEATISNLYNLIDDDRTYQYGIEIDNPN 187

Query: 185 KIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLID 244
           +IPRGPYFIKQPTD VFD+S R I ND++LSC AGGYP P+YEWFKEDY  D+L+A  ID
Sbjct: 188 EIPRGPYFIKQPTDKVFDMSTRKISNDVSLSCLAGGYPTPTYEWFKEDYENDKLIATKID 247

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
           PL++ R+T+SGG LII +P Q EDRGSYHCKA+NKFG+I+SESV+L+FG+I EFNLKR+ 
Sbjct: 248 PLNNVRYTVSGGTLIIYEPDQTEDRGSYHCKATNKFGTIVSESVELSFGYILEFNLKRSE 307

Query: 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG 364
           E G+QNWGKA++CDPP +YPGV YYWARDYFPNFVEEDKRVFVS DGALYFSALE ID G
Sbjct: 308 ERGDQNWGKAVYCDPPQHYPGVKYYWARDYFPNFVEEDKRVFVSNDGALYFSALEMIDRG 367

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
           NYSCNVQS  SDTGRNGPFFPL+V PHS+FQQLKFPNNFPK FPEAP A ++VRLEC+AF
Sbjct: 368 NYSCNVQSVASDTGRNGPFFPLRVDPHSSFQQLKFPNNFPKAFPEAPIAEEEVRLECIAF 427

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           GYPVPSYNWTRRG+PLPR AY  ++NR+L IP + V+DQGEYICR  NDR ++E+ VT++
Sbjct: 428 GYPVPSYNWTRRGAPLPRGAYTTSYNRVLIIPKIHVDDQGEYICRVYNDRLSIENGVTLT 487

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           IQA PNFTIPL DKHMDN+ +LTWTCEAFG+PDVTYSWFRNGE+LN ETL  ED+ RY I
Sbjct: 488 IQAAPNFTIPLVDKHMDNRGELTWTCEAFGIPDVTYSWFRNGEILNMETLSSEDKGRYSI 547

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           QDNVL+I+ L+PERD AMYQCRA+NQLKTRYSSAQLR+L+LKPSFKKRP+E ETYA E G
Sbjct: 548 QDNVLSIKNLDPERDQAMYQCRARNQLKTRYSSAQLRILSLKPSFKKRPMEPETYAAEKG 607

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           N+TI CNPEAAP+PKFVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y CTATN +
Sbjct: 608 NITIICNPEAAPRPKFVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYICTATNQY 667

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G DE++GRLIVL GP + E+LP +IT A  +N  LRC+   +E+LDVAYIW HNG+RI +
Sbjct: 668 GNDETRGRLIVLRGPQFMEKLPQQITTAVMQNQTLRCTGEIDEMLDVAYIWKHNGLRIRD 727

Query: 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
            DL  +  P +NI+G  L I NA+FA+AGEYEC++KS V +IS+KT V +EGPPG PGGV
Sbjct: 728 EDL--INNPRLNINGEELNIINATFAEAGEYECIIKSAVSEISSKTVVTIEGPPGPPGGV 785

Query: 785 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
           QV  + KTS T++WTDGA NG+PIT Y I ARTNWN TWF + E++   EVDRY GRKEA
Sbjct: 786 QVKNIVKTSTTLRWTDGAFNGKPITMYSISARTNWNHTWFTIIENITAIEVDRYNGRKEA 845

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
            +ENVL P++TYEF+V A NELGY  PSSPSPQY+T +DKP + P  IGGGGGKIGDL+I
Sbjct: 846 YLENVLNPYTTYEFRVSAFNELGYSLPSSPSPQYSTSSDKPMKVPFNIGGGGGKIGDLTI 905

Query: 905 SWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           +W PLP  +QN P IYYK+FWR+K ++TEFQS +LK YGNVG +VV I  ++YYTEYEVK
Sbjct: 906 TWNPLPPSEQNGPGIYYKVFWRRKYHETEFQSLSLKNYGNVGRSVVPIQQQYYYTEYEVK 965

Query: 964 VQAINDVGPGPES 976
           VQA+N +G GP S
Sbjct: 966 VQAVNALGSGPIS 978



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 193/819 (23%), Positives = 299/819 (36%), Gaps = 124/819 (15%)

Query: 221  YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKF 280
            YP   Y W ++ +       N ++   DKR  +S    +     ++ DRG+Y C      
Sbjct: 326  YPGVKYYWARDYF------PNFVE--EDKRVFVSNDGALYFSALEMIDRGNYSCNV---- 373

Query: 281  GSIISESVQLAFGFIGEF-NLKRAPEIGNQ------NWGKAMFCDPPT------------ 321
                 +SV    G  G F  L+  P    Q      N+ KA F + P             
Sbjct: 374  -----QSVASDTGRNGPFFPLRVDPHSSFQQLKFPNNFPKA-FPEAPIAEEEVRLECIAF 427

Query: 322  NYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNG 381
             YP  +Y W R   P           SY+  L    +   D G Y C V +       NG
Sbjct: 428  GYPVPSYNWTRRGAP---LPRGAYTTSYNRVLIIPKIHVDDQGEYICRVYNDRLSI-ENG 483

Query: 382  PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD---KVRLECVAFGYPVPSYNWTRRGS 438
                ++  P           NF  T P   K  D   ++   C AFG P  +Y+W R G 
Sbjct: 484  VTLTIQAAP-----------NF--TIPLVDKHMDNRGELTWTCEAFGIPDVTYSWFRNGE 530

Query: 439  PLPRNAY-------FENFNRILTIPNVKVE-DQGEYICRASNDRSALESSVTISIQA-EP 489
             L            +   + +L+I N+  E DQ  Y CRA N      SS  + I + +P
Sbjct: 531  ILNMETLSSEDKGRYSIQDNVLSIKNLDPERDQAMYQCRARNQLKTRYSSAQLRILSLKP 590

Query: 490  NFTI-PLT-DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
            +F   P+  + +   + ++T  C     P   + W ++G ++ S         R  ++  
Sbjct: 591  SFKKRPMEPETYAAEKGNITIICNPEAAPRPKFVWKKDGNVIGS------GGRRRILETG 644

Query: 548  VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
             L I  ++ + D   Y C A NQ     +  +L VL      +K P +  T   +  N T
Sbjct: 645  NLIISPVSRD-DEGTYICTATNQYGNDETRGRLIVLRGPQFMEKLPQQITTAVMQ--NQT 701

Query: 608  IFCNPEA--APKPKFVWKKDGNIIGS----GGRRKIFENGNLLISPVSRDDSGIYSCTAT 661
            + C  E        ++WK +G  I         R       L I   +  ++G Y C   
Sbjct: 702  LRCTGEIDEMLDVAYIWKHNGLRIRDEDLINNPRLNINGEELNIINATFAEAGEYECIIK 761

Query: 662  NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-----WT 716
            +      SK  + +   P     +  K  +     L+    A   + + +  I     W 
Sbjct: 762  SAVSEISSKTVVTIEGPPGPPGGVQVKNIVKTSTTLRWTDGAFNGKPITMYSISARTNWN 821

Query: 717  HNGVRI-GNMDLNELETPNINIDGGLLEITN---------ASFADAGEYECVVKSTVGKI 766
            H    I  N+   E++  N   +  L  + N         ++F + G       S     
Sbjct: 822  HTWFTIIENITAIEVDRYNGRKEAYLENVLNPYTTYEFRVSAFNELG------YSLPSSP 875

Query: 767  STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTW 823
            S + +   + P  +P  +          TI W        NG P  +YK+  R  ++ T 
Sbjct: 876  SPQYSTSSDKPMKVPFNIGGGGGKIGDLTITWNPLPPSEQNG-PGIYYKVFWRRKYHETE 934

Query: 824  F-NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
            F ++S    G       GR    I+     ++ YE KV A N LG G P S +    +  
Sbjct: 935  FQSLSLKNYGN-----VGRSVVPIQQQYY-YTEYEVKVQAVNALGSG-PISNAVTIFSAE 987

Query: 883  DKPYQAPSRIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQSETLK 939
            D P  AP ++         L +SW+P+   REK     I ++I +W++ N  E     L 
Sbjct: 988  DMPQVAPQQVVAQSYNSTSLKVSWKPIEETREKIRGKLIGHRIKYWKENNREENAVYYLS 1047

Query: 940  EYGNVGIAVVRI-PSEFYYTEYEVKVQAINDVGPGPESE 977
                    VV + P  +YY    VKV A N  G GPESE
Sbjct: 1048 RSRRPWALVVGLQPDTYYY----VKVMAYNSAGEGPESE 1082


>gi|383850888|ref|XP_003701006.1| PREDICTED: contactin-like [Megachile rotundata]
          Length = 1650

 Score = 1372 bits (3551), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/974 (67%), Positives = 794/974 (81%), Gaps = 8/974 (0%)

Query: 8   LFIFVSFHSVFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDL 65
           ++  V+   V++Q     E   +CP HW+++++SCYRF+KSP++ R DA+ NC++  SDL
Sbjct: 9   IYTLVALTGVYTQNFLYGEEYNQCPLHWIKFQESCYRFIKSPVRERQDARKNCQAYQSDL 68

Query: 66  ANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPAD 124
             +N  +EHGFIMYQL WQDPQ  KWY G   Q+ N WVNE D T L  +D AFLPEP D
Sbjct: 69  LTINSLEEHGFIMYQLLWQDPQHHKWYTGIKNQNGN-WVNEADNTQLTNMDNAFLPEPND 127

Query: 125 -NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENP 183
            +  RDY+ YS++ +L+RWG E VTG E LL+ICEA +  LH L+ DDRTY YG++IENP
Sbjct: 128 RDYNRDYVVYSYNNNLRRWGLETVTGSEKLLYICEAPMSNLHNLIEDDRTYHYGVEIENP 187

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           ++IPRGPYFIKQP D VFD+SKR I NDI+LSC AGGYP P+YEWFKEDY  DRL+A  I
Sbjct: 188 NEIPRGPYFIKQPVDKVFDVSKRKINNDISLSCLAGGYPAPTYEWFKEDYENDRLIATKI 247

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           +PL + R+T+SGG LII +P Q EDRG+YHCKA+NKFG+IISESV+L+FG+I EFNLKR+
Sbjct: 248 NPLDNARYTVSGGTLIIYEPDQTEDRGAYHCKATNKFGTIISESVELSFGYILEFNLKRS 307

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
            E G+Q WGKA++CDPP ++PGV YYWARDYFPNFVEEDKRVFVS+DGALYFS LE ID 
Sbjct: 308 EERGDQKWGKAVYCDPPQHFPGVKYYWARDYFPNFVEEDKRVFVSHDGALYFSVLEMIDR 367

Query: 364 GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
           GNYSCNVQS  SDTGRNGPFFPL+V PHS+FQQLKFPNNFPK FP+AP AG++VRLEC+A
Sbjct: 368 GNYSCNVQSVASDTGRNGPFFPLRVDPHSSFQQLKFPNNFPKAFPQAPIAGEEVRLECIA 427

Query: 424 FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           FGYPVPS+NWTRRG  LPR +Y  ++NR+L IP V V+DQGEYICRA NDR ++E+SVT+
Sbjct: 428 FGYPVPSFNWTRRGGSLPRGSYTTSYNRVLIIPKVHVDDQGEYICRAHNDRLSIENSVTL 487

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +IQA PNFTIPL DKHMDN+ +LTWTCEAFG+PDVTYSWFRNGELLN +TLP+ED++RYF
Sbjct: 488 TIQAAPNFTIPLVDKHMDNRGELTWTCEAFGIPDVTYSWFRNGELLNVDTLPIEDRERYF 547

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           IQDNVLTI+ L+PERD AMYQCRA+NQLKT+YSSAQLRVL+LKPSFKKRP+E ETYA E 
Sbjct: 548 IQDNVLTIKNLDPERDQAMYQCRARNQLKTKYSSAQLRVLSLKPSFKKRPMEPETYAAER 607

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR+I E GNL+ISPVS DD G Y C+ATN 
Sbjct: 608 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRRILEGGNLIISPVSSDDEGTYVCSATNQ 667

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
           +G DE++GRLIVL  P + E+LP +IT A  +N  LRC    +E+LDVAYIW HNG+RI 
Sbjct: 668 YGSDETRGRLIVLRRPYFLEKLPQRITTAVMQNQTLRCIGEVDEMLDVAYIWKHNGLRIR 727

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           + DL     P + IDGG L I NA+FA+AG+YEC++KS VG+IS+ TTV++EGPPG PGG
Sbjct: 728 DEDL--ASNPRLRIDGGELNIINATFAEAGDYECIIKSAVGEISSTTTVMIEGPPGPPGG 785

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           VQVV + KTS T++WTDGA NGRPIT Y + ARTNWN TWFNV E++   EVDRY GRKE
Sbjct: 786 VQVVNIVKTSTTLRWTDGAFNGRPITMYTVSARTNWNHTWFNVIENITAIEVDRYNGRKE 845

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A +ENVL P++TYEF V A NELGY  PS+PSPQY+TP+DKPY+ PS IGGGGGKIGDL+
Sbjct: 846 AYLENVLNPYTTYEFCVSAFNELGYSVPSAPSPQYSTPSDKPYKIPSNIGGGGGKIGDLT 905

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
           I+W PLP  +QN P IYYK+FWR+K ++ EFQS +LK  GN+G +VV I  ++YYTEYEV
Sbjct: 906 IAWNPLPPSEQNGPGIYYKVFWRRKYHEKEFQSLSLKGQGNIGRSVVAIQPQYYYTEYEV 965

Query: 963 KVQAINDVGPGPES 976
           KVQAIN +G GP S
Sbjct: 966 KVQAINSLGSGPVS 979



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 141/596 (23%), Positives = 226/596 (37%), Gaps = 65/596 (10%)

Query: 421  CVAFGYPVPSYNWTRRGSPL--------PRNAYFENFNRILTIPNVKVE-DQGEYICRAS 471
            C AFG P  +Y+W R G  L         R  YF   N +LTI N+  E DQ  Y CRA 
Sbjct: 514  CEAFGIPDVTYSWFRNGELLNVDTLPIEDRERYFIQDN-VLTIKNLDPERDQAMYQCRAR 572

Query: 472  NDRSALESSVTISIQA-EPNFTI-PLT-DKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            N      SS  + + + +P+F   P+  + +   + ++T  C     P   + W ++G +
Sbjct: 573  NQLKTKYSSAQLRVLSLKPSFKKRPMEPETYAAERGNVTIFCNPEAAPKPKFVWKKDGNI 632

Query: 529  LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
            + S         R  ++   L I  ++ + D   Y C A NQ  +  +  +L VL     
Sbjct: 633  IGS------GGRRRILEGGNLIISPVSSD-DEGTYVCSATNQYGSDETRGRLIVLRRPYF 685

Query: 589  FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII-----GSGGRRKIFENGNL 643
             +K P    T   +   +      +      ++WK +G  I      S  R +I + G L
Sbjct: 686  LEKLPQRITTAVMQNQTLRCIGEVDEMLDVAYIWKHNGLRIRDEDLASNPRLRI-DGGEL 744

Query: 644  LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
             I   +  ++G Y C   +  G   S   +++   P     +     +     L+    A
Sbjct: 745  NIINATFAEAGDYECIIKSAVGEISSTTTVMIEGPPGPPGGVQVVNIVKTSTTLRWTDGA 804

Query: 704  HTEELLDVAYI-----WTHNGVR-IGNMDLNELETPNINIDGGLLEITN---------AS 748
                 + +  +     W H     I N+   E++  N   +  L  + N         ++
Sbjct: 805  FNGRPITMYTVSARTNWNHTWFNVIENITAIEVDRYNGRKEAYLENVLNPYTTYEFCVSA 864

Query: 749  FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD---GATNG 805
            F + G       S     S + +   + P  +P  +          TI W        NG
Sbjct: 865  FNELG------YSVPSAPSPQYSTPSDKPYKIPSNIGGGGGKIGDLTIAWNPLPPSEQNG 918

Query: 806  RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
             P  +YK+  R  ++   F      +  +     GR   +I+     ++ YE KV A N 
Sbjct: 919  -PGIYYKVFWRRKYHEKEF----QSLSLKGQGNIGRSVVAIQPQYY-YTEYEVKVQAINS 972

Query: 866  LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI 923
            LG G P S      +  D P  AP ++         L +SW P+   REK     I ++I
Sbjct: 973  LGSG-PVSNEVTIFSAEDMPQVAPQQVVAHSYNSTSLKVSWSPIEQTREKVRGKLIGHRI 1031

Query: 924  -FWRKKNDTEFQSETLKEYGNVGIAVVRI-PSEFYYTEYEVKVQAINDVGPGPESE 977
             +W++ N  E     L         VV + P  +YY    VKV A N  G GPESE
Sbjct: 1032 KYWKESNREEDAVYYLSRSTQPWALVVGLQPDTYYY----VKVMAYNSAGEGPESE 1083


>gi|340724306|ref|XP_003400523.1| PREDICTED: contactin-like [Bombus terrestris]
          Length = 1642

 Score = 1360 bits (3519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/973 (67%), Positives = 794/973 (81%), Gaps = 8/973 (0%)

Query: 9   FIFVSFHSVFSQTIDELEL-RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN 67
           +I +     F+Q +   E  +CPQHW+++++SCYRF+KSP++ R +AK NC++  SDL  
Sbjct: 10  YILIVTSYTFAQNVLYGEQNQCPQHWIKFQESCYRFIKSPIRDRQEAKKNCEAYRSDLIT 69

Query: 68  VNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPADN- 125
           +N  +EHGFI+Y L WQDPQ RKWY G   Q+ N W+NE D T L  ++ AFLPEP DN 
Sbjct: 70  INSLEEHGFILYHLLWQDPQHRKWYTGIKYQNGN-WINEADNTQLLNMENAFLPEPVDNT 128

Query: 126 VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDK 185
           +  DYL YS+  +L+RWG E+VTG +  L+ICEA I  L+ L++DDRTYQYG++I+NP +
Sbjct: 129 LGEDYLVYSYHNNLQRWGLEKVTGRDRFLYICEAPISNLYNLVDDDRTYQYGIEIDNPRE 188

Query: 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           IPRGPYFIKQPTD VFDLSKR I ND+ LSC AGGYP P+YEWFKEDY  DRL+A  IDP
Sbjct: 189 IPRGPYFIKQPTDKVFDLSKRKINNDVALSCLAGGYPAPTYEWFKEDYENDRLIATKIDP 248

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
           L++ R+T+SGG LII +P Q EDRGSYHCKA+NKFG+IISESV+L+FG+I EFNLKR+ E
Sbjct: 249 LNNNRYTVSGGTLIIYEPDQAEDRGSYHCKATNKFGTIISESVELSFGYILEFNLKRSEE 308

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 365
            G QNWGK ++CDPP ++PGV YYWARDYFPNFVEEDKRVFVS+DGALYFSALE ID GN
Sbjct: 309 RGEQNWGKVVYCDPPQHFPGVKYYWARDYFPNFVEEDKRVFVSHDGALYFSALEMIDRGN 368

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
           YSCNVQS  SDTGRNGPFFPL+V PHS+FQQLKF +NFPK FP+AP AG +VRLECVAFG
Sbjct: 369 YSCNVQSVASDTGRNGPFFPLRVDPHSSFQQLKFSDNFPKAFPDAPIAGVEVRLECVAFG 428

Query: 426 YPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485
           YP+PSYNWTRRG+ LPR +Y  ++NR+L IP V V+DQGEY CR  NDRSA+E+SV ++I
Sbjct: 429 YPIPSYNWTRRGASLPRGSYTTSYNRVLIIPKVHVDDQGEYTCRVYNDRSAIENSVRLTI 488

Query: 486 QAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ 545
           QA PNFTIPL DKHMDN+ +LTWTCEAFG+PDV+YSWFRNGE+LN ETLP +D+DRY IQ
Sbjct: 489 QAAPNFTIPLVDKHMDNRGELTWTCEAFGIPDVSYSWFRNGEILNMETLPSQDRDRYSIQ 548

Query: 546 DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN 605
           DNVL+I+YL+PERD AMYQCRA+NQLKT+YSSAQLR+L+LKPSFKKRP+E ETYA E GN
Sbjct: 549 DNVLSIKYLDPERDQAMYQCRARNQLKTKYSSAQLRILSLKPSFKKRPMEPETYAAEKGN 608

Query: 606 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 665
           VTIFCNPEAAP+PKFVWKKDGN+IGSGGRRKI E GNL+ISPVSRDD G Y CTATN +G
Sbjct: 609 VTIFCNPEAAPRPKFVWKKDGNVIGSGGRRKILETGNLIISPVSRDDEGTYICTATNQYG 668

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGN 724
            D+++GRLIVL GP + E+LP  +T A  +N  LRC     +E+LDVAYIW HNG+RI +
Sbjct: 669 SDDTRGRLIVLRGPQFIEKLPQHVTSAVMQNQTLRCMGEVVDEMLDVAYIWKHNGLRIRD 728

Query: 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
            DL  +  P ++IDG  L I NA+FA+AGEY+C++KS VG+IS+KTTV +EGPPG PGGV
Sbjct: 729 EDL--INNPRLHIDGEELNIINATFAEAGEYQCIIKSAVGEISSKTTVTIEGPPGPPGGV 786

Query: 785 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
           QVV + KTS T++WTDGA NG+PIT Y + ARTNWN TW N+ E++   EVDRY GRKEA
Sbjct: 787 QVVNIVKTSTTLRWTDGAFNGKPITMYTVSARTNWNHTWSNIIENITAVEVDRYNGRKEA 846

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
            +ENVL P++TYEF V A NELGY  PSSPSPQY+TP+DKP + PS IGGGGGKIGDL+I
Sbjct: 847 YLENVLNPYTTYEFCVSAFNELGYSLPSSPSPQYSTPSDKPTKVPSNIGGGGGKIGDLTI 906

Query: 905 SWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           +W+PLP  +QN P IYYK+FWR+K ++TEFQS +LK+YGN G +VV+I  ++YYTEYEVK
Sbjct: 907 TWDPLPSSEQNGPGIYYKVFWRQKYHETEFQSLSLKDYGNAGRSVVQIQQQYYYTEYEVK 966

Query: 964 VQAINDVGPGPES 976
           VQA N +G GP S
Sbjct: 967 VQAANALGFGPIS 979



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 196/824 (23%), Positives = 305/824 (37%), Gaps = 133/824 (16%)

Query: 221  YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKF 280
            +P   Y W ++ +       N ++   DKR  +S    +     ++ DRG+Y C      
Sbjct: 326  FPGVKYYWARDYF------PNFVE--EDKRVFVSHDGALYFSALEMIDRGNYSCNV---- 373

Query: 281  GSIISESVQLAFGFIGEF-NLKRAPEIGNQ------NWGKAMFCDPPT------------ 321
                 +SV    G  G F  L+  P    Q      N+ KA F D P             
Sbjct: 374  -----QSVASDTGRNGPFFPLRVDPHSSFQQLKFSDNFPKA-FPDAPIAGVEVRLECVAF 427

Query: 322  NYPGVNYYWARD--YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNV---QSKVSD 376
             YP  +Y W R     P           SY+  L    +   D G Y+C V   +S + +
Sbjct: 428  GYPIPSYNWTRRGASLPR-----GSYTTSYNRVLIIPKVHVDDQGEYTCRVYNDRSAIEN 482

Query: 377  TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD---KVRLECVAFGYPVPSYNW 433
            + R      L +    NF           T P   K  D   ++   C AFG P  SY+W
Sbjct: 483  SVR------LTIQAAPNF-----------TIPLVDKHMDNRGELTWTCEAFGIPDVSYSW 525

Query: 434  TRRGSPL--------PRNAYFENFNRILTIPNVKVE-DQGEYICRASNDRSALESSVTIS 484
             R G  L         R+ Y    N +L+I  +  E DQ  Y CRA N      SS  + 
Sbjct: 526  FRNGEILNMETLPSQDRDRYSIQDN-VLSIKYLDPERDQAMYQCRARNQLKTKYSSAQLR 584

Query: 485  IQA-EPNFTI-PLT-DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            I + +P+F   P+  + +   + ++T  C     P   + W ++G ++ S         R
Sbjct: 585  ILSLKPSFKKRPMEPETYAAEKGNVTIFCNPEAAPRPKFVWKKDGNVIGS------GGRR 638

Query: 542  YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
              ++   L I  ++ + D   Y C A NQ  +  +  +L VL   P F ++ L     + 
Sbjct: 639  KILETGNLIISPVSRD-DEGTYICTATNQYGSDDTRGRLIVLR-GPQFIEK-LPQHVTSA 695

Query: 602  EGGNVTIFCNPEAAPKP---KFVWKKDGNIIGS----GGRRKIFENGNLLISPVSRDDSG 654
               N T+ C  E   +     ++WK +G  I         R   +   L I   +  ++G
Sbjct: 696  VMQNQTLRCMGEVVDEMLDVAYIWKHNGLRIRDEDLINNPRLHIDGEELNIINATFAEAG 755

Query: 655  IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
             Y C   +  G   SK  + +   P     +     +     L+    A   + + +  +
Sbjct: 756  EYQCIIKSAVGEISSKTTVTIEGPPGPPGGVQVVNIVKTSTTLRWTDGAFNGKPITMYTV 815

Query: 715  -----WTHNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK-------S 761
                 W H    I  N+   E++  N   +  L  + N        YE  V        S
Sbjct: 816  SARTNWNHTWSNIIENITAVEVDRYNGRKEAYLENVLNPYTT----YEFCVSAFNELGYS 871

Query: 762  TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTN 818
                 S + +   + P  +P  +          TI W        NG P  +YK+  R  
Sbjct: 872  LPSSPSPQYSTPSDKPTKVPSNIGGGGGKIGDLTITWDPLPSSEQNG-PGIYYKVFWRQK 930

Query: 819  WNSTWF-NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
            ++ T F ++S    G       GR    I+     ++ YE KV A N LG+G P S +  
Sbjct: 931  YHETEFQSLSLKDYGN-----AGRSVVQIQQQYY-YTEYEVKVQAANALGFG-PISNAVT 983

Query: 878  YNTPADKPYQAPSRIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQ 934
              +  D P  AP ++   G     L +SW P+   RE+     I ++I +W++ N  E  
Sbjct: 984  IFSAEDMPQVAPQQVIAHGYNSTSLKVSWLPIEQTRERIRGKLIGHRIKYWKESNKEEDA 1043

Query: 935  SETLKEYGNVGIAVVRI-PSEFYYTEYEVKVQAINDVGPGPESE 977
               L         VV + P  +YY    VKV A N  G GPESE
Sbjct: 1044 VYYLSRSARPWALVVGLQPDTYYY----VKVMAYNSAGEGPESE 1083


>gi|350420740|ref|XP_003492608.1| PREDICTED: contactin-like [Bombus impatiens]
          Length = 1813

 Score = 1356 bits (3509), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/973 (66%), Positives = 790/973 (81%), Gaps = 8/973 (0%)

Query: 9   FIFVSFHSVFSQTIDELE-LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN 67
           +I +     F+Q +   E  +CPQHW+++++SCYRF+KSP++ R +AK NC++  SDL  
Sbjct: 10  YILIVTSYTFAQNVLYGEQYQCPQHWIKFQESCYRFIKSPIRDRQEAKKNCEAYQSDLTT 69

Query: 68  VNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPADN- 125
           +N  +EHGFI+Y L WQDPQ  KWY G   Q+ N W+NE D T L  ++ AFLPEP DN 
Sbjct: 70  INSLEEHGFILYHLLWQDPQHHKWYTGIKYQNGN-WINEADNTQLLNMENAFLPEPVDNT 128

Query: 126 VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDK 185
           +  DYL YS+  +L+RWG E+V G +  L+ICEA I  LH L++DDRTYQYG++I+NP +
Sbjct: 129 LGGDYLVYSYHNNLQRWGLEKVNGRDRFLYICEAPISNLHNLVDDDRTYQYGIEIDNPRE 188

Query: 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           IPRGPYFIKQPTD VFDLSKR I ND+ LSC AGGYP P+YEWFKEDY  DRL+A  IDP
Sbjct: 189 IPRGPYFIKQPTDKVFDLSKRKINNDVALSCLAGGYPAPTYEWFKEDYENDRLIATKIDP 248

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
           L++ R+T+SGG LII +P Q EDRGSYHCKA+NKFG+IISESV+L+FG+I EFNLKR+ E
Sbjct: 249 LNNNRYTISGGTLIIYEPDQTEDRGSYHCKATNKFGTIISESVELSFGYILEFNLKRSEE 308

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 365
            G QNWGK ++CDPP ++PGV YYWARDYFPNFVEEDKRVFVS+DGALYFSALE ID GN
Sbjct: 309 RGEQNWGKVVYCDPPQHFPGVKYYWARDYFPNFVEEDKRVFVSHDGALYFSALEMIDRGN 368

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
           YSCNVQS  SDTGRNGPFFPL+V  HS+FQQLKF  NFPK FP+AP AG++VRLECVAFG
Sbjct: 369 YSCNVQSVASDTGRNGPFFPLRVDSHSSFQQLKFSGNFPKAFPDAPIAGEEVRLECVAFG 428

Query: 426 YPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485
           YP+PSYNWTRRG+ LPR +Y  ++NR+L IP V V+DQGEY CR  NDRSA+E+SV ++I
Sbjct: 429 YPIPSYNWTRRGASLPRGSYTTSYNRVLIIPKVHVDDQGEYTCRVYNDRSAIENSVRLTI 488

Query: 486 QAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ 545
           QA PNFTIPL DKHMDN+ +LTWTCEAFG+PDV+YSWFRNGE+LN ETLP +D+DRY IQ
Sbjct: 489 QAAPNFTIPLVDKHMDNRGELTWTCEAFGIPDVSYSWFRNGEMLNMETLPSQDRDRYSIQ 548

Query: 546 DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN 605
           DNVL+I+YL+PERD AMYQCRA+NQLKT+YSSAQLR+L+LKPSFKKRP+E ETYA E GN
Sbjct: 549 DNVLSIKYLDPERDQAMYQCRARNQLKTKYSSAQLRILSLKPSFKKRPMEPETYAAEKGN 608

Query: 606 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 665
           VTIFCNPEAAP+PKFVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y CTATN +G
Sbjct: 609 VTIFCNPEAAPRPKFVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYICTATNQYG 668

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGN 724
            D+++GRLIVL GP + E+LP  +T A  +N  LRC     +E+LDVAYIW HNG+RI +
Sbjct: 669 SDDTRGRLIVLRGPQFIEKLPQHVTSAVMQNQTLRCMGEVVDEMLDVAYIWKHNGLRIRD 728

Query: 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
            DL  +  P ++IDG  L I NA+FA+AGEY+C++KS VG+IS+KTTV +EGPPG PGGV
Sbjct: 729 EDL--INNPRLHIDGEELNIINATFAEAGEYQCIIKSAVGEISSKTTVTIEGPPGPPGGV 786

Query: 785 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
           QVV + KTS T++WTDGA NG+PIT Y + ARTNWN TW N+ E++   EVDRY GRKEA
Sbjct: 787 QVVNIVKTSTTLRWTDGAFNGKPITMYTVSARTNWNHTWSNIIENITAVEVDRYNGRKEA 846

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
            +ENVL P++TYEF V A NELGY  PSSPSPQY+TP DKP + PS IGGGGGKIGDL+I
Sbjct: 847 YLENVLNPYTTYEFCVSAFNELGYSLPSSPSPQYSTPPDKPTKVPSNIGGGGGKIGDLTI 906

Query: 905 SWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           +W+PLP  +QN P IYYK+FWR+K ++TEFQS +LK+YGN G +VV+I  ++YYTEYEVK
Sbjct: 907 TWDPLPSSEQNGPGIYYKVFWRQKYHETEFQSLSLKDYGNAGRSVVQIQQQYYYTEYEVK 966

Query: 964 VQAINDVGPGPES 976
           VQA N +G GP S
Sbjct: 967 VQAANALGFGPIS 979



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 162/678 (23%), Positives = 259/678 (38%), Gaps = 93/678 (13%)

Query: 348  SYDGALYFSALEQIDAGNYSCNV---QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFP 404
            SY+  L    +   D G Y+C V   +S + ++ R      L +    NF          
Sbjct: 451  SYNRVLIIPKVHVDDQGEYTCRVYNDRSAIENSVR------LTIQAAPNF---------- 494

Query: 405  KTFPEAPKAGD---KVRLECVAFGYPVPSYNWTRRGSPL--------PRNAYFENFNRIL 453
             T P   K  D   ++   C AFG P  SY+W R G  L         R+ Y    N +L
Sbjct: 495  -TIPLVDKHMDNRGELTWTCEAFGIPDVSYSWFRNGEMLNMETLPSQDRDRYSIQDN-VL 552

Query: 454  TIPNVKVE-DQGEYICRASNDRSALESSVTISIQA-EPNFTI-PLT-DKHMDNQADLTWT 509
            +I  +  E DQ  Y CRA N      SS  + I + +P+F   P+  + +   + ++T  
Sbjct: 553  SIKYLDPERDQAMYQCRARNQLKTKYSSAQLRILSLKPSFKKRPMEPETYAAEKGNVTIF 612

Query: 510  CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
            C     P   + W ++G ++ S         R  ++   L I  ++ + D   Y C A N
Sbjct: 613  CNPEAAPRPKFVWKKDGNVIGS------GGRRRILETGNLIISPVSRD-DEGTYICTATN 665

Query: 570  QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP---KFVWKKDG 626
            Q  +  +  +L VL   P F ++ L     +    N T+ C  E   +     ++WK +G
Sbjct: 666  QYGSDDTRGRLIVLR-GPQFIEK-LPQHVTSAVMQNQTLRCMGEVVDEMLDVAYIWKHNG 723

Query: 627  NIIGS----GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
              I         R   +   L I   +  ++G Y C   +  G   SK  + +   P   
Sbjct: 724  LRIRDEDLINNPRLHIDGEELNIINATFAEAGEYQCIIKSAVGEISSKTTVTIEGPPGPP 783

Query: 683  EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-----WTHNGVRI-GNMDLNELETPNIN 736
              +     +     L+    A   + + +  +     W H    I  N+   E++  N  
Sbjct: 784  GGVQVVNIVKTSTTLRWTDGAFNGKPITMYTVSARTNWNHTWSNIIENITAVEVDRYNGR 843

Query: 737  IDGGLLEITN---------ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
             +  L  + N         ++F + G       S     S + +   + P  +P  +   
Sbjct: 844  KEAYLENVLNPYTTYEFCVSAFNELG------YSLPSSPSPQYSTPPDKPTKVPSNIGGG 897

Query: 788  EVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWF-NVSEHVIGKEVDRYTGRKE 843
                   TI W        NG P  +YK+  R  ++ T F ++S    G       GR  
Sbjct: 898  GGKIGDLTITWDPLPSSEQNG-PGIYYKVFWRQKYHETEFQSLSLKDYGN-----AGRSV 951

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
              I+     ++ YE KV A N LG+G P S +    +  D P  AP ++   G     L 
Sbjct: 952  VQIQQQYY-YTEYEVKVQAANALGFG-PISNAVTIFSAEDMPQVAPQQVVAHGYNSTSLK 1009

Query: 904  ISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRI-PSEFYYTE 959
            +SW P+   RE+     I ++I +W++ N  E     L         VV + P  +YY  
Sbjct: 1010 VSWLPIEQTRERIRGKLIGHRIKYWKESNKEEDAVYYLSRSARPWALVVGLQPDTYYY-- 1067

Query: 960  YEVKVQAINDVGPGPESE 977
              VKV A N  G GPESE
Sbjct: 1068 --VKVMAYNSAGEGPESE 1083


>gi|332023779|gb|EGI64003.1| Contactin [Acromyrmex echinatior]
          Length = 1220

 Score = 1342 bits (3473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/979 (65%), Positives = 783/979 (79%), Gaps = 10/979 (1%)

Query: 3   LISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD 62
           LI++   + +S  +     +   E +CPQHW+Q+++SCYRFVKSPL+ R DA+ NC++  
Sbjct: 5   LITAVFSLILSLPAFAQNILYGEEYKCPQHWIQFQESCYRFVKSPLRPREDARRNCQAFQ 64

Query: 63  SDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPE 121
           SDL  +N  +EHGF++YQL WQDPQ R+WY G   Q+  LW+NE D T L  +D AFLPE
Sbjct: 65  SDLLTINTMEEHGFVLYQLLWQDPQHRRWYTGIKLQN-GLWINEADSTTLINMDNAFLPE 123

Query: 122 PADNVQ-RDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDI 180
             DN+  RDYLAYS+S SL+RWG E+VTG E LL+ICEA I  LH L+ +DRTYQYG++I
Sbjct: 124 --DNILGRDYLAYSYSNSLQRWGLEKVTGREELLYICEAPIATLHNLVEEDRTYQYGINI 181

Query: 181 ENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVA 240
           +NP +IPRGPYFIKQP + VFD SKR++ ND++LSC AGGYP P+YEWF+E YV D LVA
Sbjct: 182 DNPLQIPRGPYFIKQPINKVFDQSKRNVRNDVSLSCLAGGYPTPTYEWFRETYVNDLLVA 241

Query: 241 NLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL 300
             IDPL D++FT+SGG LII DP    D G YHCKA+NKFG+IISES +L+FGFI EFNL
Sbjct: 242 IKIDPLVDRKFTVSGGTLIIYDPNSKIDSGLYHCKATNKFGTIISESAELSFGFINEFNL 301

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQ 360
           KR+ E G+ +WGK M+CDPP ++P V+YYW R+YFPNFVEEDKRVFVS+DGALYFSALE 
Sbjct: 302 KRSEERGDNHWGKVMYCDPPQHFPDVSYYWVREYFPNFVEEDKRVFVSHDGALYFSALET 361

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLE 420
           ID GNYSC VQ+   D GRNGPFFPLKV  HS+FQQLKFPNNFPK FPEAP AG+ VRLE
Sbjct: 362 IDRGNYSCYVQNIAFDIGRNGPFFPLKVDMHSSFQQLKFPNNFPKAFPEAPIAGETVRLE 421

Query: 421 CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           C+AFGYPVPSYNWT+RGS LPR AY  NFNR+L +P V VEDQGEY+CR  NDR ++E+S
Sbjct: 422 CIAFGYPVPSYNWTKRGSILPRGAYTANFNRVLILPRVHVEDQGEYVCRVYNDRLSIENS 481

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           V ++IQA PNFTIPL DKHMD+ ADLTWTCEAFG+PDVTYSWF+NG+LL+S  L LE++D
Sbjct: 482 VQLTIQATPNFTIPLVDKHMDDHADLTWTCEAFGIPDVTYSWFKNGKLLDS--LSLEERD 539

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           RY IQDNVL I +++ E+D  MYQC A+NQL+T YSSAQLRVL+LKPSFKKRP+ESETYA
Sbjct: 540 RYTIQDNVLNIHHVDSEKDQGMYQCCARNQLRTTYSSAQLRVLSLKPSFKKRPMESETYA 599

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
            EGGNVTI CNPEAAP+PKF+WKKDGNIIGSGGRR+I E GNL+ISPVSRDD G Y CTA
Sbjct: 600 AEGGNVTIMCNPEAAPRPKFIWKKDGNIIGSGGRRRILETGNLIISPVSRDDEGTYVCTA 659

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
           TN +G DE++GRLIVL GP + ++LP +I +  + NL L C  H +E+LD+AYIWTHNG+
Sbjct: 660 TNQYGNDETRGRLIVLRGPQFVQRLPSQIILYYNNNLTLHCLGHIDEMLDIAYIWTHNGM 719

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
           RI + DL     P +NIDG  L I NA+F +AGEYEC++KS VG IS+K  +IV+GPPG 
Sbjct: 720 RIRDKDLQ--NNPRLNIDGEYLNIINATFTEAGEYECILKSAVGAISSKLNLIVQGPPGP 777

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           PGGVQV+ + KTSAT++W+DGA NG+PIT Y I ART+WN TWF++ E++   E DRY G
Sbjct: 778 PGGVQVMNIFKTSATLRWSDGAMNGKPITMYTISARTDWNQTWFSLVENITAFEADRYNG 837

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
           RKEA++ENVL P+STYEF+V+A NE GYG PS PSP+Y+TP+DKP +APS I GGGGKIG
Sbjct: 838 RKEANLENVLNPYSTYEFRVLAFNEFGYGPPSLPSPRYSTPSDKPAKAPSNISGGGGKIG 897

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
           DL+I+W+PL    QN P +YYKIFWR+K  + EFQS +L+EYGN+G +VV IP ++YYTE
Sbjct: 898 DLTITWDPLNPSDQNGPGVYYKIFWRRKGYEKEFQSLSLQEYGNIGSSVVPIPQQYYYTE 957

Query: 960 YEVKVQAINDVGPGPESEV 978
           YEVKVQAIN +G GP S +
Sbjct: 958 YEVKVQAINAMGEGPVSNI 976



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 142/607 (23%), Positives = 236/607 (38%), Gaps = 89/607 (14%)

Query: 421  CVAFGYPVPSYNWTRRGSPL------PRNAYFENFNRILTIPNVKVE-DQGEYICRASND 473
            C AFG P  +Y+W + G  L       R+ Y    N +L I +V  E DQG Y C A N 
Sbjct: 511  CEAFGIPDVTYSWFKNGKLLDSLSLEERDRYTIQDN-VLNIHHVDSEKDQGMYQCCARNQ 569

Query: 474  RSALESSVTISIQA-EPNFTI-PL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
                 SS  + + + +P+F   P+ ++ +     ++T  C     P   + W ++G ++ 
Sbjct: 570  LRTTYSSAQLRVLSLKPSFKKRPMESETYAAEGGNVTIMCNPEAAPRPKFIWKKDGNIIG 629

Query: 531  SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
            S         R  ++   L I  ++ + D   Y C A NQ     +  +L VL   P F 
Sbjct: 630  S------GGRRRILETGNLIISPVSRD-DEGTYVCTATNQYGNDETRGRLIVLR-GPQFV 681

Query: 591  KRPLESETYAGEGGNVTIFC--NPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL---- 644
            +R L S+       N+T+ C  + +      ++W  +G  I    R K  +N   L    
Sbjct: 682  QR-LPSQIILYYNNNLTLHCLGHIDEMLDIAYIWTHNGMRI----RDKDLQNNPRLNIDG 736

Query: 645  ----ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
                I   +  ++G Y C   +  G   SK  LIV   P     +           L+  
Sbjct: 737  EYLNIINATFTEAGEYECILKSAVGAISSKLNLIVQGPPGPPGGVQVMNIFKTSATLRWS 796

Query: 701  CSAHTEELLDVAYI-----WTHNGVR-IGNMDLNELETPNINIDGGLLEITNASFADAGE 754
              A   + + +  I     W       + N+   E +  N   +  L  + N       E
Sbjct: 797  DGAMNGKPITMYTISARTDWNQTWFSLVENITAFEADRYNGRKEANLENVLNP--YSTYE 854

Query: 755  YECVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW--TDGAT 803
            +  +  +  G         + ST +    + P  + GG   +       TI W   + + 
Sbjct: 855  FRVLAFNEFGYGPPSLPSPRYSTPSDKPAKAPSNISGGGGKI----GDLTITWDPLNPSD 910

Query: 804  NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP------WSTYE 857
               P  +YKI     W    +        KE    + ++  +I + +VP      ++ YE
Sbjct: 911  QNGPGVYYKIF----WRRKGYE-------KEFQSLSLQEYGNIGSSVVPIPQQYYYTEYE 959

Query: 858  FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL--PREKQN 915
             KV A N +G G  S+    Y+   D P  AP  +         L+++W+P+   RE+  
Sbjct: 960  VKVQAINAMGEGPVSNIETVYSA-EDMPQAAPQLVYSMSYNSTSLNVTWQPIEQTRERVR 1018

Query: 916  APNIYYKI-FWRK----KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
               I ++I +W+K    ++ T + S T + +    + V   P  +YY    VKV A N  
Sbjct: 1019 GKLIGHRIKYWQKTISEEDATYYLSRTTRPWS---LVVGLQPDTYYY----VKVMAYNSA 1071

Query: 971  GPGPESE 977
            G GPESE
Sbjct: 1072 GEGPESE 1078


>gi|242009529|ref|XP_002425536.1| Contactin precursor, putative [Pediculus humanus corporis]
 gi|212509411|gb|EEB12798.1| Contactin precursor, putative [Pediculus humanus corporis]
          Length = 1266

 Score = 1320 bits (3416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/957 (65%), Positives = 765/957 (79%), Gaps = 5/957 (0%)

Query: 24   ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFW 83
            E EL+CPQHW QY+ SCYRF+KSP++ R DAK NC++  SDL +VN  +EHGF++YQL W
Sbjct: 69   EYELKCPQHWEQYQQSCYRFIKSPMRAREDAKKNCEAYHSDLVSVNSLEEHGFLIYQLLW 128

Query: 84   QDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRW 142
            +DPQ RKWY    Q +P  WVN+ DG+ L  ++ AFLP   +N   DYL YS+S +LKRW
Sbjct: 129  RDPQHRKWYTSIRQHNPGNWVNDGDGSPLLNMENAFLPSQDNNYGSDYLVYSYSHNLKRW 188

Query: 143  GFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFD 202
            GF+ V G E  L+ICEA I KLHY+  D+RT++YG+++ +P+KIP GPYFI QP DVVFD
Sbjct: 189  GFKAVKGDEQFLYICEAHIGKLHYMSVDERTHEYGINVNDPNKIPMGPYFIMQPQDVVFD 248

Query: 203  LSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIND 262
            +S   + ND+TL C AGGYP+P+YEWFKE+Y  D L + LI+PL DKR+T+SGGNLII D
Sbjct: 249  VSNVKVTNDVTLRCLAGGYPSPTYEWFKEEYENDVLTSVLINPLVDKRYTISGGNLIIYD 308

Query: 263  PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTN 322
            P+Q+EDRGSYHCKA+NKFGSI+SES++L+FG+I EFNL+RAPE GNQNWGK ++CDPP +
Sbjct: 309  PKQIEDRGSYHCKATNKFGSILSESIKLSFGYINEFNLQRAPESGNQNWGKTIYCDPPPH 368

Query: 323  YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382
            +P +NY W RDYFPNFVEED+RVFVS+DGALYFSAL++ID G+YSC  QSKVS  GR GP
Sbjct: 369  FPDINYKWTRDYFPNFVEEDRRVFVSFDGALYFSALQEIDRGSYSCTAQSKVSSIGRTGP 428

Query: 383  FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
            FF L V  + N+QQLKFPNNFPK FPEAP AG  VRLEC+AFGYPVP+YNWTRRG+P+PR
Sbjct: 429  FFHLNVVTNPNYQQLKFPNNFPKVFPEAPLAGKDVRLECIAFGYPVPTYNWTRRGAPMPR 488

Query: 443  NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
             + F NFNR+L +P   VEDQGEY+CRA NDR+++E+ V +SIQAEPNFTIPL DKH+D 
Sbjct: 489  GSVFTNFNRVLILPQASVEDQGEYVCRAFNDRASIENGVFVSIQAEPNFTIPLADKHLDY 548

Query: 503  QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
            Q DLTWTCEAFG+PDV Y+WFRNG  LN   LP +D+DRYF+QDN+L I+ LNP  D  M
Sbjct: 549  QEDLTWTCEAFGIPDVNYTWFRNGLPLNPFNLPPQDRDRYFVQDNILQIKRLNPLSDAGM 608

Query: 563  YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
            YQCRA NQLKT+YSSAQLRVL+ KPSF+K+PLE+ETYA EGGNVTI CNPEAAP+PKFVW
Sbjct: 609  YQCRASNQLKTKYSSAQLRVLSFKPSFEKKPLEAETYAAEGGNVTIVCNPEAAPRPKFVW 668

Query: 623  KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
            KK+ +I+GSGGRRKI ENGNL+ISPVSRDD G+Y+CTA+N +G+DES+G LIVL  P   
Sbjct: 669  KKNNDILGSGGRRKILENGNLIISPVSRDDEGLYTCTASNNYGVDESRGLLIVLRAPKMT 728

Query: 683  EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
               PP+I  +   N  L C A+T+ELLD AYIWTHNG+RI   D + L    +  DGG+L
Sbjct: 729  STFPPQIITSVMENFTLNCEANTDELLDTAYIWTHNGIRIKERDSSNLR---LIPDGGIL 785

Query: 743  EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
             + N + A+AGEYEC+VKS VG+ISTKT VIV GPPG PGGVQVV +  TSATIQWTDGA
Sbjct: 786  HVINTTLAEAGEYECIVKSAVGRISTKTNVIVHGPPGPPGGVQVVSISTTSATIQWTDGA 845

Query: 803  TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            +NGRPI +Y + ARTNWNSTW NV++ +  +EVDRY  RKEA +ENVL PWS YEF+V+A
Sbjct: 846  SNGRPILYYNVAARTNWNSTWQNVTKLITAREVDRYNNRKEAILENVLSPWSIYEFRVLA 905

Query: 863  GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
             N++G G PS PSPQY+TP D P + PS IGGGGGKIGDLSI+W PLP + QN P IYYK
Sbjct: 906  VNQIGPGYPSLPSPQYSTPPDSPNKPPSNIGGGGGKIGDLSITWTPLPPQDQNGPGIYYK 965

Query: 923  IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            IFWR+   + EF+ + LKE+GNVG AVVR+ SE+Y+TEYEVKVQAIND+G GPES V
Sbjct: 966  IFWRRNGTNREFEFKELKEFGNVGAAVVRVNSEYYFTEYEVKVQAINDIGKGPESAV 1022



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 22/179 (12%)

Query: 807  PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNE 865
            P  +YKI  R N  +  F        KE+  +     A +  N    ++ YE KV A N+
Sbjct: 960  PGIYYKIFWRRNGTNREFEF------KELKEFGNVGAAVVRVNSEYYFTEYEVKVQAIND 1013

Query: 866  LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP--REKQNAPNIYYKI 923
            +G G  S+    Y+   + P  AP ++         L+++W P+P  R+      I +++
Sbjct: 1014 IGKGPESAVHVIYSA-EEMPLAAPQQVSARSFNSTSLNVTWTPIPMRRDIVRGKLIGHRL 1072

Query: 924  FWRKKNDTEFQ-----SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
             + K +  EF+     S TL+ +      +V +  + YY    VKV A N+ G GPESE
Sbjct: 1073 KYWKTSQQEFEAVYYLSRTLRPWA----LIVGLQPDTYYN---VKVMAYNNAGEGPESE 1124


>gi|307210402|gb|EFN86967.1| Contactin [Harpegnathos saltator]
          Length = 1647

 Score = 1312 bits (3396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/987 (64%), Positives = 789/987 (79%), Gaps = 16/987 (1%)

Query: 3   LISSCLFIFVSFHSVFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS 60
           L+   +F  V    V++Q+   +E   +CP HW++++ SCYRF+ SPL++R +A+ NC++
Sbjct: 4   LLCVVVFSLVLSLPVYAQSTFYEESTYQCPLHWIKFQQSCYRFINSPLRSRENARKNCQA 63

Query: 61  LDSDLANVNDADEHGFIMYQLFWQDPQ--RRKWYFGGTQQSPNLWVNE-DGTNLNELDAA 117
             SDL  +N  DEHGF++ Q F  + Q    +WY G  QQ+  +W+NE D TNL  LD+ 
Sbjct: 64  FQSDLLTINSVDEHGFVI-QHFRDNDQYHHHRWYIGVKQQN-GIWINEADNTNLINLDSI 121

Query: 118 FLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYG 177
           FLPEP DN+ RDYLAYSFS SL RWG ERVTG++ LL+ICEASI  L  L+ DDRTYQYG
Sbjct: 122 FLPEPNDNIIRDYLAYSFSISLNRWGLERVTGLDELLYICEASIAALRNLVEDDRTYQYG 181

Query: 178 MDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDR 237
           ++I NP +IPRGPYFIKQP   VFD+SK+ I ND+ LSC AGGYP P+YEWFKE+Y  DR
Sbjct: 182 IEIYNPLEIPRGPYFIKQPKSKVFDVSKKRISNDVYLSCLAGGYPTPTYEWFKENYENDR 241

Query: 238 LVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE 297
           L+A  IDP+S+ R+T+SGG LII +P Q  DRG+YHCKASNKFG IISESV+L+FG+I E
Sbjct: 242 LIAIKIDPISNNRYTVSGGTLIIYEPEQKIDRGTYHCKASNKFGIIISESVELSFGYILE 301

Query: 298 FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSA 357
           FNLKR+ E G+ +WGKA++CDPP ++PGV YYWARDYFPNFVEEDKRVFVS+DGALYFSA
Sbjct: 302 FNLKRSEERGDNHWGKAVYCDPPQHFPGVKYYWARDYFPNFVEEDKRVFVSHDGALYFSA 361

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 417
           LE ID GNYSCNVQS  SDTGRNGPFFPL+V  HS+FQQLKFPNNFPK FPEAP AG++V
Sbjct: 362 LETIDRGNYSCNVQSVASDTGRNGPFFPLRVDMHSSFQQLKFPNNFPKAFPEAPIAGEEV 421

Query: 418 RLECVAFGYPVPSYNWTRRGS-----PLPRNAYFENFNRILTIPNVKVEDQGEYICRASN 472
           RLEC+AFGYPVPS+NWTR+ S      LPR AY  +++R+L IP V+VEDQGEY+CRA N
Sbjct: 422 RLECIAFGYPVPSFNWTRKDSNLKDLTLPREAYTTSYDRVLIIPRVRVEDQGEYVCRAYN 481

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
           D+ ++E+SV ++IQAEP FTIPL DKHMDN+ DLTWTCEAFG+PDVTY+WFRNGE+ +  
Sbjct: 482 DKLSIENSVQLTIQAEPTFTIPLVDKHMDNKGDLTWTCEAFGLPDVTYTWFRNGEIFDMF 541

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
           TLP ED+DRY IQDNVLTI+ LNPERD AMYQC AKNQLKT YSSAQLRVL+LKPSFKKR
Sbjct: 542 TLPPEDRDRYIIQDNVLTIKGLNPERDEAMYQCCAKNQLKTTYSSAQLRVLSLKPSFKKR 601

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDD 652
           P+ESETYA EGGNVT+ C PEAAPKP F W+KD   +G+GGRR+I  NGNL+ISPVSRDD
Sbjct: 602 PMESETYAAEGGNVTLMCKPEAAPKPDFKWRKDKTTLGAGGRRRIV-NGNLIISPVSRDD 660

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
            G Y C ATN +G DE++GRLIVL  P + E+LP +I ++ ++N  LRC  + +E+LD+A
Sbjct: 661 EGTYVCVATNEYGQDETRGRLIVLRAPYFIERLPTRIIMSYNQNQTLRCLGYADEMLDMA 720

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
           YIW HNG+RI N DL  +  P I++DG  L+I NA+F + G+YECV+KS VG+IS+KT +
Sbjct: 721 YIWKHNGMRIRNKDL--MNNPRIHVDGEYLDIINATFVETGDYECVLKSAVGEISSKTIL 778

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
           IVEGPPG PGG+ V+ V KTSATI+WTDGA NGR IT Y++ ART WN+TWF V E++  
Sbjct: 779 IVEGPPGPPGGILVMNVAKTSATIRWTDGALNGRLITMYRVEARTKWNNTWFPVVENITA 838

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
            E+DRY GRKEA +ENVL P+S+YEF+V A NE GYG PSSPSP+++T ADKP +APS I
Sbjct: 839 IEMDRYIGRKEAHLENVLNPYSSYEFRVSAFNEFGYGPPSSPSPRHSTLADKPTKAPSNI 898

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRI 951
            GGGGKIGDL+I+W+PL    QN P IYYKIFWR+K ++T+FQS +LKE+GN+G++VV +
Sbjct: 899 SGGGGKIGDLTITWDPLSPSDQNGPRIYYKIFWRRKGHETQFQSLSLKEFGNIGMSVVSV 958

Query: 952 PSEFYYTEYEVKVQAINDVGPGPESEV 978
            S++YYTEYEVKVQAIND+G GP S++
Sbjct: 959 QSKYYYTEYEVKVQAINDLGAGPISDI 985



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 26/194 (13%)

Query: 795  TIQW---TDGATNGRPITHYKIIARTNWNSTWF-NVSEHVIGKEVDRYTGRKEASIENVL 850
            TI W   +    NG P  +YKI  R   + T F ++S    G       G    S+++  
Sbjct: 909  TITWDPLSPSDQNG-PRIYYKIFWRRKGHETQFQSLSLKEFGN-----IGMSVVSVQSKY 962

Query: 851  VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL- 909
              ++ YE KV A N+LG G  S     Y +  D P  AP  +         L++SW P+ 
Sbjct: 963  Y-YTEYEVKVQAINDLGAGPISDIYTVY-SAEDMPQVAPQLVVAMSYNSTSLNVSWSPIE 1020

Query: 910  -PREKQNAPNIYYKIFWRKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
              RE+     I ++I + K N  E     + S T + +    + V   P  +Y+    VK
Sbjct: 1021 QTRERVRGKLIGHRIKYWKNNFPEEGAVYYLSRTTRPWS---LVVGLQPDTYYF----VK 1073

Query: 964  VQAINDVGPGPESE 977
            V A N  G GPESE
Sbjct: 1074 VMAYNSAGEGPESE 1087


>gi|270015155|gb|EFA11603.1| hypothetical protein TcasGA2_TC013632 [Tribolium castaneum]
          Length = 1180

 Score = 1169 bits (3025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/957 (59%), Positives = 721/957 (75%), Gaps = 49/957 (5%)

Query: 26   ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD-----SDLANVNDADEHGFIMYQ 80
            +L+CP+HWV+   SCYRF++SPL+   +A+  C++       SDL ++   +EHGF++ Q
Sbjct: 123  DLKCPEHWVRLYQSCYRFIRSPLRPYEEARRICEAYSPEDGRSDLVSIGSTEEHGFLINQ 182

Query: 81   LFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLK 140
            L   DPQ R+WY G  Q S N W N DG+ L  ++ AFLP  A+   +D+LA        
Sbjct: 183  LNALDPQHRRWYIGTYQHSANYWTNVDGSQLVNMENAFLPV-AEPYGKDHLA-------- 233

Query: 141  RWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVV 200
                                            TY YG++I NP++IPRGPYFIKQP D  
Sbjct: 234  --------------------------------TYTYGVEITNPEQIPRGPYFIKQPVDAT 261

Query: 201  FDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLII 260
            FD SK+ + NDI+LSC AGG+P P+YEWF+EDY  D+LVA  IDPLSD R+T+SGG LII
Sbjct: 262  FDSSKKMLYNDISLSCLAGGFPTPTYEWFREDYEIDKLVARRIDPLSDPRYTISGGMLII 321

Query: 261  NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP 320
            ++P +  D  +YHCKASNKFG+IISESVQL FGFI EF LKR+PE G++NWGKA++CDPP
Sbjct: 322  HEPEEKRDHATYHCKASNKFGTIISESVQLNFGFIKEFVLKRSPESGDKNWGKAIYCDPP 381

Query: 321  TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN 380
             ++P V Y W+RDYFPNFVEED+RVFVSYDGALYFSALE ID  NYSC+VQS+ SD+GRN
Sbjct: 382  NHFPSVRYSWSRDYFPNFVEEDRRVFVSYDGALYFSALETIDKANYSCSVQSEFSDSGRN 441

Query: 381  GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
            GPFFPL V PHS++QQLKFPNNFPK FP+AP AG +VRLEC+AFGYPVPSYNWTRRG+PL
Sbjct: 442  GPFFPLMVNPHSHYQQLKFPNNFPKAFPDAPIAGKEVRLECMAFGYPVPSYNWTRRGAPL 501

Query: 441  PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
            PR+A   +FNR+LTIP+V+VEDQGEY+CRA NDR++ E+S+ ++IQAEPNFTIPL D+H 
Sbjct: 502  PRSAVLSSFNRVLTIPHVQVEDQGEYVCRAYNDRASTENSLILNIQAEPNFTIPLADRHA 561

Query: 501  DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
            D++++L WTCEAFG+PDV Y+W++NG  L    +  E++DR  IQDNVLTIRYL+ ERDP
Sbjct: 562  DSKSELVWTCEAFGIPDVNYTWWKNGRQLVMGYMEPEERDRIRIQDNVLTIRYLDQERDP 621

Query: 561  AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 620
             MYQCRA N LKT+YSSAQLRVL  +P+FKK PLE+ETYA EGG+VTI CNPEAAP+P+F
Sbjct: 622  GMYQCRATNSLKTKYSSAQLRVLAFRPTFKKHPLEAETYAAEGGSVTIKCNPEAAPRPEF 681

Query: 621  VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
            VWKKDGN++GSGG R+I ENGNL+IS VSRDD G Y+C A+N  G+DESKGRLIVL GP 
Sbjct: 682  VWKKDGNVLGSGGHRRILENGNLVISSVSRDDEGQYTCRASNQFGVDESKGRLIVLRGPR 741

Query: 681  YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 740
              E L PKI     R   LRC A TEE+LD+AY+W+HNG++I ++D+  +    + IDGG
Sbjct: 742  LIESLTPKIVTTVGRYFDLRCLAETEEMLDIAYVWSHNGIKIRDIDIKNMNY-RLRIDGG 800

Query: 741  LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
             L +TNA+F DAGEYEC +KSTVGKIS+++ V+VEG P  P G   V + K+S T+QWTD
Sbjct: 801  FLSVTNATFTDAGEYECTIKSTVGKISSRSVVVVEG-PPGPPGGVTVSIQKSSFTLQWTD 859

Query: 801  GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            GAT+G  I  Y +  RTNWN TW N+S  V  +E+DRYTG+KE+ I+  L PWSTYEF++
Sbjct: 860  GATHGSQIRGYTVSGRTNWNQTWVNISYIVDVREIDRYTGQKESLIDTALTPWSTYEFRI 919

Query: 861  IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
             A N  G G PS+PSP+++TP D+PY AP  IGGGGGKIGDL+I+W PL  ++QN P IY
Sbjct: 920  AAWNSWGMGPPSAPSPRHSTPPDRPYIAPYNIGGGGGKIGDLTITWSPLKPDEQNGPGIY 979

Query: 921  YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            Y+IFW++K+ + EFQ++ LKE+GN G+AVV IP ++YYTEY VKVQAIN +GPGP S
Sbjct: 980  YRIFWKRKDQEVEFQTQELKEFGNTGMAVVHIPPQYYYTEYIVKVQAINQIGPGPIS 1036


>gi|91082585|ref|XP_967335.1| PREDICTED: similar to cell adhesion molecule [Tribolium castaneum]
          Length = 1192

 Score = 1164 bits (3011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 570/957 (59%), Positives = 719/957 (75%), Gaps = 57/957 (5%)

Query: 26   ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD-----SDLANVNDADEHGFIMYQ 80
            +L+CP+HWV+   SCYRF++SPL+   +A+  C++       SDL ++   +EHGF++ Q
Sbjct: 123  DLKCPEHWVRLYQSCYRFIRSPLRPYEEARRICEAYSPEDGRSDLVSIGSTEEHGFLINQ 182

Query: 81   LFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLK 140
            L   DPQ R+WY G  Q S N W N DG+ L  ++ AFLP  A+   +D+LA        
Sbjct: 183  LNALDPQHRRWYIGTYQHSANYWTNVDGSQLVNMENAFLPV-AEPYGKDHLA-------- 233

Query: 141  RWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVV 200
                                            TY YG++I NP++IPRGPYFIKQP D  
Sbjct: 234  --------------------------------TYTYGVEITNPEQIPRGPYFIKQPVDAT 261

Query: 201  FDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLII 260
            FD SK+ + NDI+LSC AGG+P P+YEWF+EDY  D+LVA  IDPLSD R+T+SGG LII
Sbjct: 262  FDSSKKMLYNDISLSCLAGGFPTPTYEWFREDYEIDKLVARRIDPLSDPRYTISGGMLII 321

Query: 261  NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP 320
            ++P +  D  +YHCKASNKFG+IISESVQL FGFI EF LKR+PE G++NWGKA++CDPP
Sbjct: 322  HEPEEKRDHATYHCKASNKFGTIISESVQLNFGFIKEFVLKRSPESGDKNWGKAIYCDPP 381

Query: 321  TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN 380
             ++P V Y W+RDYFPNFVEED+RVFVSYDGALYFSALE ID  NYSC+VQS+ SD+GRN
Sbjct: 382  NHFPSVRYSWSRDYFPNFVEEDRRVFVSYDGALYFSALETIDKANYSCSVQSEFSDSGRN 441

Query: 381  GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
            GPFFPL V PHS++QQLKFPNNFPK FP+AP AG +VRLEC+AFGYPVPSYNWTRRG+PL
Sbjct: 442  GPFFPLMVNPHSHYQQLKFPNNFPKAFPDAPIAGKEVRLECMAFGYPVPSYNWTRRGAPL 501

Query: 441  PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
            PR+A   +FNR+LTIP+V+VEDQGEY+CRA NDR++ E+S+ ++IQAEPNFTIPL D+H 
Sbjct: 502  PRSAVLSSFNRVLTIPHVQVEDQGEYVCRAYNDRASTENSLILNIQAEPNFTIPLADRHA 561

Query: 501  DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
            D++++L WTCEAFG+PDV Y+W++NG  L        ++DR  IQDNVLTIRYL+ ERDP
Sbjct: 562  DSKSELVWTCEAFGIPDVNYTWWKNGRQL--------ERDRIRIQDNVLTIRYLDQERDP 613

Query: 561  AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 620
             MYQCRA N LKT+YSSAQLRVL  +P+FKK PLE+ETYA EGG+VTI CNPEAAP+P+F
Sbjct: 614  GMYQCRATNSLKTKYSSAQLRVLAFRPTFKKHPLEAETYAAEGGSVTIKCNPEAAPRPEF 673

Query: 621  VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
            VWKKDGN++GSGG R+I ENGNL+IS VSRDD G Y+C A+N  G+DESKGRLIVL GP 
Sbjct: 674  VWKKDGNVLGSGGHRRILENGNLVISSVSRDDEGQYTCRASNQFGVDESKGRLIVLRGPR 733

Query: 681  YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 740
              E L PKI     R   LRC A TEE+LD+AY+W+HNG++I ++D+  +    + IDGG
Sbjct: 734  LIESLTPKIVTTVGRYFDLRCLAETEEMLDIAYVWSHNGIKIRDIDIKNMNY-RLRIDGG 792

Query: 741  LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
             L +TNA+F DAGEYEC +KSTVGKIS+++ V+VEG P  P G   V + K+S T+QWTD
Sbjct: 793  FLSVTNATFTDAGEYECTIKSTVGKISSRSVVVVEG-PPGPPGGVTVSIQKSSFTLQWTD 851

Query: 801  GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            GAT+G  I  Y +  RTNWN TW N+S  V  +E+DRYTG+KE+ I+  L PWSTYEF++
Sbjct: 852  GATHGSQIRGYTVSGRTNWNQTWVNISYIVDVREIDRYTGQKESLIDTALTPWSTYEFRI 911

Query: 861  IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
             A N  G G PS+PSP+++TP D+PY AP  IGGGGGKIGDL+I+W PL  ++QN P IY
Sbjct: 912  AAWNSWGMGPPSAPSPRHSTPPDRPYIAPYNIGGGGGKIGDLTITWSPLKPDEQNGPGIY 971

Query: 921  YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            Y+IFW++K+ + EFQ++ LKE+GN G+AVV IP ++YYTEY VKVQAIN +GPGP S
Sbjct: 972  YRIFWKRKDQEVEFQTQELKEFGNTGMAVVHIPPQYYYTEYIVKVQAINQIGPGPIS 1028


>gi|183979292|dbj|BAG30765.1| contactin [Papilio xuthus]
          Length = 1326

 Score = 1144 bits (2960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/965 (57%), Positives = 706/965 (73%), Gaps = 15/965 (1%)

Query: 24   ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFW 83
            E   RCP +W++YR+SCYRF KSP + RN+A+  C++  +DLA+VN  +EHGFI+  L  
Sbjct: 116  EERYRCPPNWIRYRESCYRFTKSPDRPRNEARKICQAYSADLASVNTPEEHGFIITNLMK 175

Query: 84   QDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPADNVQR------DYLAYSFS 136
             DPQ+  WY G  QQSP  W NE DG+ L  L+ AF  +    +        DYL Y F 
Sbjct: 176  LDPQKGSWYIGAHQQSPGYWANEGDGSQLTGLENAFFDDHKLTLTSYNLYPLDYLVYRFM 235

Query: 137  QSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP 196
            Q   RWG   V G +   FICE   Q+LHYL+ ++R++ YG++  +P+ IPRGP+  K+P
Sbjct: 236  QEEGRWGLAPVEGTQYYHFICEGQTQRLHYLIEEERSFTYGLERFDPEAIPRGPFLTKEP 295

Query: 197  TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGG 256
             D ++D  +      + L+C AGG+P P+Y+WF+EDY  D+LV   IDPL D RF LSGG
Sbjct: 296  VDTIYDPLRNHY---VQLTCIAGGFPGPTYKWFREDYQVDKLVFTEIDPLLDPRFILSGG 352

Query: 257  NLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF 316
             L+I +P    D   YHC ASNKFG+I SESV+L+FGFI EFN KR  E GNQ WGK M 
Sbjct: 353  TLMIYNPNAETDNAQYHCTASNKFGTIRSESVRLSFGFIREFNQKRPIESGNQYWGKVMS 412

Query: 317  CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 376
            CDPP+ YP VN+ WAR+YFPN VEEDKRVFVSYDG LYFSALE ID GNYSCNV SKVSD
Sbjct: 413  CDPPSYYPSVNFLWARNYFPNLVEEDKRVFVSYDGGLYFSALETIDRGNYSCNVMSKVSD 472

Query: 377  TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR 436
             GRNGPFFPL V+PHS++QQLKFPNNFPK FP+AP  G +VRLECV+FGYPVPSYNWTR+
Sbjct: 473  AGRNGPFFPLYVYPHSDWQQLKFPNNFPKVFPDAPVVGQEVRLECVSFGYPVPSYNWTRK 532

Query: 437  GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
               +PR A+F NF+R+LTIPNV VED+GEY+C   +DR+ + +SV + +QAEPNFTIPL 
Sbjct: 533  NGNIPRKAHFSNFDRVLTIPNVGVEDEGEYVCDVRSDRANIHNSVFLKVQAEPNFTIPLA 592

Query: 497  DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
            DKHMDN+ DL W CEAFG+PDV Y+W++NG  L+ +TL  ED+DRY IQDNVL I++L+P
Sbjct: 593  DKHMDNKGDLHWNCEAFGIPDVNYTWWKNGVKLSMDTLEDEDRDRYIIQDNVLIIKFLDP 652

Query: 557  ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 616
             RDP MYQC AKNQLK +YS+ QLRVL+LKPSFKKRPLESETY  EGGNVT+ CNPEAAP
Sbjct: 653  ARDPGMYQCEAKNQLKAKYSTGQLRVLSLKPSFKKRPLESETYGSEGGNVTLKCNPEAAP 712

Query: 617  KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
            KP F WKKD  +IG+GG+R I E GNL+I  +SRDD G+Y+C A N +G DES+GRLIVL
Sbjct: 713  KPTFTWKKDNIVIGAGGKRFITETGNLIIRQLSRDDEGVYTCVAKNQYGSDESRGRLIVL 772

Query: 677  HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
              P + E+LPP+IT    + + L C+A  + +LD AY+W HNG+R+ + + +      + 
Sbjct: 773  RTPRFLERLPPRITTQVGQVIFLHCNAEIDPILDTAYLWNHNGMRLKD-ESDMYADKRLK 831

Query: 737  IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 796
            IDGG L I + S +D G+YECVVKS +G+IS+ T + +EGPPG PGG+Q++ + ++S T+
Sbjct: 832  IDGGELTIFDVSLSDVGDYECVVKSAIGRISSHTQLRIEGPPGPPGGLQIMNIGRSSITL 891

Query: 797  QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWS 854
            +WTD  +NGRP+T Y +  RT WN++W  +S++ IG   EVDRY GRK A +   L+P S
Sbjct: 892  EWTDSNSNGRPVTSYVLTGRTQWNTSWTVISDN-IGNIIEVDRYNGRKRAILNTALMPGS 950

Query: 855  TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
             YEF+V A N LG G+PS+PSPQ++T  DKPYQAP+ +GGGGGKIGDL+I+W PLP   Q
Sbjct: 951  VYEFRVQAVNALGVGKPSAPSPQFSTLPDKPYQAPANVGGGGGKIGDLTITWTPLPPHLQ 1010

Query: 915  NAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            N P I+YKIFWR+   + EFQS  LKEYGNVG+ VV +   ++YT Y VKVQA+N +G G
Sbjct: 1011 NGPGIHYKIFWRRNGTEVEFQSLLLKEYGNVGMHVVHVSLNYFYTPYNVKVQALNSLGAG 1070

Query: 974  PESEV 978
            PESE+
Sbjct: 1071 PESEM 1075



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 199/824 (24%), Positives = 314/824 (38%), Gaps = 132/824 (16%)

Query: 221  YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKF 280
            YP+ ++ W +  +       NL++   DKR  +S    +     +  DRG+Y C   +K 
Sbjct: 419  YPSVNFLWARNYF------PNLVE--EDKRVFVSYDGGLYFSALETIDRGNYSCNVMSKV 470

Query: 281  GSI-------------ISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN 327
                             S+  QL F          AP +G +   + +       YP  +
Sbjct: 471  SDAGRNGPFFPLYVYPHSDWQQLKFPNNFPKVFPDAPVVGQEVRLECV----SFGYPVPS 526

Query: 328  YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            Y W R    N     K  F ++D  L    +   D G Y C+V+S  ++   N  F  LK
Sbjct: 527  YNWTRK---NGNIPRKAHFSNFDRVLTIPNVGVEDEGEYVCDVRSDRANI-HNSVF--LK 580

Query: 388  VFPHSNFQQLKFPNNFPKTFPEAPKAGDK---VRLECVAFGYPVPSYNWTRRGSPLPRNA 444
            V    NF           T P A K  D    +   C AFG P  +Y W + G  L  + 
Sbjct: 581  VQAEPNF-----------TIPLADKHMDNKGDLHWNCEAFGIPDVNYTWWKNGVKLSMDT 629

Query: 445  YF-ENFNRILTIPNVKV-------EDQGEYICRASNDRSALESSVTISIQA-EPNFTI-P 494
               E+ +R +   NV +        D G Y C A N   A  S+  + + + +P+F   P
Sbjct: 630  LEDEDRDRYIIQDNVLIIKFLDPARDPGMYQCEAKNQLKAKYSTGQLRVLSLKPSFKKRP 689

Query: 495  L-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
            L ++ +     ++T  C     P  T++W ++  ++ +         R+  +   L IR 
Sbjct: 690  LESETYGSEGGNVTLKCNPEAAPKPTFTWKKDNIVIGA------GGKRFITETGNLIIRQ 743

Query: 554  LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
            L+ + D  +Y C AKNQ  +  S  +L VL      ++ P    T  G+   + + CN E
Sbjct: 744  LSRD-DEGVYTCVAKNQYGSDESRGRLIVLRTPRFLERLPPRITTQVGQV--IFLHCNAE 800

Query: 614  AAP--KPKFVWKKDGNIIGS-----GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
              P     ++W  +G  +         +R   + G L I  VS  D G Y C   +  G 
Sbjct: 801  IDPILDTAYLWNHNGMRLKDESDMYADKRLKIDGGELTIFDVSLSDVGDYECVVKSAIGR 860

Query: 667  DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH-------TEELLDVAYIWTHNG 719
              S  +L +   P     L  +I      ++ L  +         T  +L     W  + 
Sbjct: 861  ISSHTQLRIEGPPGPPGGL--QIMNIGRSSITLEWTDSNSNGRPVTSYVLTGRTQWNTSW 918

Query: 720  VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST----VGKISTKT---TV 772
              I +   N +E    N  G    I N +      YE  V++     VGK S  +   + 
Sbjct: 919  TVISDNIGNIIEVDRYN--GRKRAILNTALMPGSVYEFRVQAVNALGVGKPSAPSPQFST 976

Query: 773  IVEGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWF----- 824
            + + P   P  V          TI WT       NG P  HYKI  R N     F     
Sbjct: 977  LPDKPYQAPANVGGGGGKIGDLTITWTPLPPHLQNG-PGIHYKIFWRRNGTEVEFQSLLL 1035

Query: 825  ----NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
                NV  HV+   ++ +              ++ Y  KV A N LG G P S      +
Sbjct: 1036 KEYGNVGMHVVHVSLNYF--------------YTPYNVKVQALNSLGAG-PESEMATIYS 1080

Query: 881  PADKPYQAPSRIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTE----F 933
              D P  AP ++         L+++W+P+   R++     I +++ +W+++N  +    +
Sbjct: 1081 AEDMPQVAPQQVYSRSFNSTALNVTWDPIDQSRDRLRGRLIGHRLRYWKQENKEKECIYY 1140

Query: 934  QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
             S T +   N  + V   P  +YY    VKV A N  G GPESE
Sbjct: 1141 LSRTTR---NWALIVGLQPDTYYY----VKVMAFNSAGEGPESE 1177


>gi|28571501|ref|NP_649461.2| contactin [Drosophila melanogaster]
 gi|55976626|sp|Q9VN14.2|CONT_DROME RecName: Full=Contactin; Flags: Precursor
 gi|28381126|gb|AAF52137.2| contactin [Drosophila melanogaster]
 gi|33413906|gb|AAP44004.1| contactin [Drosophila melanogaster]
 gi|60677949|gb|AAX33481.1| RE02061p [Drosophila melanogaster]
          Length = 1390

 Score = 1065 bits (2753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/1012 (52%), Positives = 676/1012 (66%), Gaps = 69/1012 (6%)

Query: 29   CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
            CP+HWV +R +CYRF++SP +   +AK  CK+ ++DL NV++ ++H FI+  L  Q+ ++
Sbjct: 139  CPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAHNADLINVDNVEKHSFILKNLILQNQRQ 198

Query: 89   RKWYFGGTQQSPNLWVN---------EDGTNLNEL---------DAAFL----------- 119
             +++    Q  P  WVN         ED  +++E          D  FL           
Sbjct: 199  NRFFISARQTGPLNWVNDDNTQLVQIEDSFSMDEQVPLENEDLHDNRFLVQNDLNNQNIN 258

Query: 120  -----------------------------PEPADNVQRDYLAYSFSQSLKRWGFERVTGM 150
                                         P   +   RD + Y+FS+   RW F     +
Sbjct: 259  NPNQFYNSLPGTVNQRNQNNLRGFIGPNQPYGDNRYVRDRVVYAFSKKRDRWMFMPAYEI 318

Query: 151  EPLLFICEASI----QKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKR 206
            E  LFICE+ +      ++  L+D R Y YG+DI + ++IPRGPYF+KQP D  FD++K 
Sbjct: 319  ELNLFICESKVLYSSDNVNIKLDDKRPYHYGLDINDMERIPRGPYFVKQPNDTTFDVNKN 378

Query: 207  SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
             ++ND+TLSC A GYP PSY W++E YV DRL    IDPL+  R+T+SGGNLII +P+Q 
Sbjct: 379  RLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQA 438

Query: 267  EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
             D+G+YHC A NKFG I SES  L FGFI EFNLKR+ E    NWGK++FCDPP +YP V
Sbjct: 439  LDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGKSIFCDPPQHYPDV 498

Query: 327  NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
             YYWARDYFPNFVEED+RVFVS DGALYFS +E +D  NYSC VQ+ VSDTGRNGPFFPL
Sbjct: 499  RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPL 558

Query: 387  KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            +V P+SN+Q L F N FPK FPEAP AGD++RLEC+AFGYP+PSYNWTR+G PL RNAY 
Sbjct: 559  RVTPNSNYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPIPSYNWTRQGLPLQRNAYT 618

Query: 447  ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
             N+ R+L I N    D GEY C  +N R  L  S+ I+IQ  P FTIPL D   D  +D+
Sbjct: 619  INYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDV 678

Query: 507  TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
            T+ CEAF +PD  Y+W++N E L+   +   ++DRY IQDNVLTI++L  ++D AMYQC 
Sbjct: 679  TFICEAFAIPDANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDDAMYQCG 735

Query: 567  AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
            A+NQLKT +SSAQLRVL++KPSFKK PLESE YA   GN TI C+PEAAP+PKF WKKDG
Sbjct: 736  AQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDG 795

Query: 627  NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
             +IGSGG R+I  +G L ISP SRDD GIY+C A+N  G DES  R+IVL    + E  P
Sbjct: 796  QVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPP 855

Query: 687  PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
             +I    H  + L C A  +ELLD+AY+W HNG  + N   N   T  I +D   L + N
Sbjct: 856  QRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWNRLTVHN 912

Query: 747  ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
             S  DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W DG+ NGR
Sbjct: 913  TSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGR 972

Query: 807  PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
             I +Y I+ RTNWN TW NVS HV  +EVDRYT R++A + N L PWS YEF V A N+L
Sbjct: 973  AIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSVTAVNDL 1031

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
            G G PS+PSP Y+T  DKPY AP  +GGGGGKIGDL+I+W+PL  ++Q++  I+YK+FW+
Sbjct: 1032 GIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWK 1091

Query: 927  KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             K   E+ S+ +K+  ++G+AVV IP   YYTEYEVKVQAIN VG GPESE+
Sbjct: 1092 LKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEI 1143



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 152/709 (21%), Positives = 261/709 (36%), Gaps = 115/709 (16%)

Query: 323  YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382
            YP  +Y W R   P    +     ++Y   L        D G YSC + +          
Sbjct: 598  YPIPSYNWTRQGLP---LQRNAYTINYGRVLIIQNATTNDNGEYSCTITN---------- 644

Query: 383  FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-GDKVRLECVAFGYPVPSYNWTRRGSPL- 440
              P K    S +  ++    F     +  K     V   C AF  P  +Y W +    L 
Sbjct: 645  --PRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNAERLD 702

Query: 441  PRNAYFENF---NRILTIPNV-KVEDQGEYICRASND-RSALESSVTISIQAEPNFTI-P 494
            P N   + +   + +LTI  + K +D   Y C A N  +++  S+    +  +P+F   P
Sbjct: 703  PANINRDRYIIQDNVLTIKFLEKDKDDAMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHP 762

Query: 495  L-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
            L ++ +     + T  C+    P   + W ++G+++ S         R  +    LTI  
Sbjct: 763  LESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGS------GGHRRILPSGTLTISP 816

Query: 554  LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
             + + D  +Y C A NQ  T  S A++ VL      +  P    +   +     IF + E
Sbjct: 817  TSRD-DEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHD----LIFLHCE 871

Query: 614  AAPKP----KFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
            AA        +VWK +G ++ +   G  R I +   L +   S  D+G Y C   +    
Sbjct: 872  AAFDELLDIAYVWKHNGEVLKNNHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNE 931

Query: 667  DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 726
              SK  + +   P      P  + +     +Q+  +    E +D     +HNG  I   +
Sbjct: 932  ISSKTSVSIEGAPG----APGGVQV-----IQISKTKAIIEWVD----GSHNGRAIRYYN 978

Query: 727  LNELETPN---INIDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKT 770
            +      N   +N+   +              E+ N +   A E+     + +G I T +
Sbjct: 979  ILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLG-IGTPS 1037

Query: 771  ------TVIVEGPPGLPGGVQVVEVHKTSATIQW-----TDGATNGRPITHYKIIARTNW 819
                  +   + P   P  V          TI W      +  ++G    HYK+  +   
Sbjct: 1038 APSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHG---IHYKVFWKLKG 1094

Query: 820  NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP----WSTYEFKVIAGNELGYGEPSSPS 875
               W +          D    +    +  V +P    ++ YE KV A N +G G P S  
Sbjct: 1095 AIEWAS----------DEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKG-PESEI 1143

Query: 876  PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI-------YYKIFWRKK 928
               ++  D P  AP +           +++W+P+   ++N           Y+K   +++
Sbjct: 1144 AVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSRENIRGKLIGHRLKYWKTTHQEE 1203

Query: 929  NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
            +   + S T +   N  + V   P  +Y+    VKV A N  G GPESE
Sbjct: 1204 DSVYYLSRTTR---NWALIVGLQPDTYYF----VKVMAYNAAGEGPESE 1245


>gi|236752377|gb|ACQ91625.1| RT02589p [Drosophila melanogaster]
          Length = 1354

 Score = 1063 bits (2749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/1012 (52%), Positives = 676/1012 (66%), Gaps = 69/1012 (6%)

Query: 29   CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
            CP+HWV +R +CYRF++SP +   +AK  CK+ ++DL NV++ ++H FI+  L  Q+ ++
Sbjct: 121  CPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAHNADLINVDNVEKHSFILKNLILQNQRQ 180

Query: 89   RKWYFGGTQQSPNLWVN---------EDGTNLNEL---------DAAFL----------- 119
             +++    Q  P  WVN         ED  +++E          D  FL           
Sbjct: 181  NRFFISARQTGPLNWVNDDNTQLVQIEDSFSMDEQVPLENEDLHDNRFLVQNDLNNQNIN 240

Query: 120  -----------------------------PEPADNVQRDYLAYSFSQSLKRWGFERVTGM 150
                                         P   +   RD + Y+FS+   RW F     +
Sbjct: 241  NPNQFYNSLPGTVNQRNQNNLRGFIGPNQPYGDNRYVRDRVVYAFSKKRDRWMFMPAYEI 300

Query: 151  EPLLFICEASI----QKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKR 206
            E  LFICE+ +      ++  L+D R Y YG+DI + ++IPRGPYF+KQP D  FD++K 
Sbjct: 301  ELNLFICESKVLYSSDNVNIKLDDKRPYHYGLDINDMERIPRGPYFVKQPNDTTFDVNKN 360

Query: 207  SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
             ++ND+TLSC A GYP PSY W++E YV DRL    IDPL+  R+T+SGGNLII +P+Q 
Sbjct: 361  RLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQA 420

Query: 267  EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
             D+G+YHC A NKFG I SES  L FGFI EFNLKR+ E    NWGK++FCDPP +YP V
Sbjct: 421  LDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGKSIFCDPPQHYPDV 480

Query: 327  NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
             YYWARDYFPNFVEED+RVFVS DGALYFS +E +D  NYSC VQ+ VSDTGRNGPFFPL
Sbjct: 481  RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPL 540

Query: 387  KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            +V P+SN+Q L F N FPK FPEAP AGD++RLEC+AFGYP+PSYNWTR+G PL RNAY 
Sbjct: 541  RVTPNSNYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPIPSYNWTRQGLPLQRNAYT 600

Query: 447  ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
             N+ R+L I N    D GEY C  +N R  L  S+ I+IQ  P FTIPL D   D  +D+
Sbjct: 601  INYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDV 660

Query: 507  TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
            T+ CEAF +PD  Y+W++N E L+   +   ++DRY IQDNVLTI++L  ++D AMYQC 
Sbjct: 661  TFICEAFAIPDANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDDAMYQCG 717

Query: 567  AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
            A+NQLKT +SSAQLRVL++KPSFKK PLESE YA   GN TI C+PEAAP+PKF WKKDG
Sbjct: 718  AQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDG 777

Query: 627  NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
             +IGSGG R+I  +G L ISP SRDD GIY+C A+N  G DES  R+IVL    + E  P
Sbjct: 778  QVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPP 837

Query: 687  PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
             +I    H  + L C A  +ELLD+AY+W HNG  + N   N   T  I +D   L + N
Sbjct: 838  QRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWNRLTVHN 894

Query: 747  ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
             S  DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W DG+ NGR
Sbjct: 895  TSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSHNGR 954

Query: 807  PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
             I +Y I+ RTNWN TW NVS HV  +EVDRYT R++A + N L PWS YEF V A N+L
Sbjct: 955  AIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSVTAVNDL 1013

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
            G G PS+PSP Y+T  DKPY AP  +GGGGGKIGDL+I+W+PL  ++Q++  I+YK+FW+
Sbjct: 1014 GIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWK 1073

Query: 927  KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             K   E+ S+ +K+  ++G+AVV IP   YYTEYEVKVQAIN VG GPESE+
Sbjct: 1074 LKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEI 1125



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 152/709 (21%), Positives = 261/709 (36%), Gaps = 115/709 (16%)

Query: 323  YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382
            YP  +Y W R   P    +     ++Y   L        D G YSC + +          
Sbjct: 580  YPIPSYNWTRQGLP---LQRNAYTINYGRVLIIQNATTNDNGEYSCTITN---------- 626

Query: 383  FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-GDKVRLECVAFGYPVPSYNWTRRGSPL- 440
              P K    S +  ++    F     +  K     V   C AF  P  +Y W +    L 
Sbjct: 627  --PRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNAERLD 684

Query: 441  PRNAYFENF---NRILTIPNV-KVEDQGEYICRASND-RSALESSVTISIQAEPNFTI-P 494
            P N   + +   + +LTI  + K +D   Y C A N  +++  S+    +  +P+F   P
Sbjct: 685  PANINRDRYIIQDNVLTIKFLEKDKDDAMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHP 744

Query: 495  L-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
            L ++ +     + T  C+    P   + W ++G+++ S         R  +    LTI  
Sbjct: 745  LESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGS------GGHRRILPSGTLTISP 798

Query: 554  LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
             + + D  +Y C A NQ  T  S A++ VL      +  P    +   +     IF + E
Sbjct: 799  TSRD-DEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHD----LIFLHCE 853

Query: 614  AAPKP----KFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
            AA        +VWK +G ++ +   G  R I +   L +   S  D+G Y C   +    
Sbjct: 854  AAFDELLDIAYVWKHNGEVLKNNHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNE 913

Query: 667  DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 726
              SK  + +   P      P  + +     +Q+  +    E +D     +HNG  I   +
Sbjct: 914  ISSKTSVSIEGAPG----APGGVQV-----IQISKTKAIIEWVD----GSHNGRAIRYYN 960

Query: 727  LNELETPN---INIDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKT 770
            +      N   +N+   +              E+ N +   A E+     + +G I T +
Sbjct: 961  ILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLG-IGTPS 1019

Query: 771  ------TVIVEGPPGLPGGVQVVEVHKTSATIQW-----TDGATNGRPITHYKIIARTNW 819
                  +   + P   P  V          TI W      +  ++G    HYK+  +   
Sbjct: 1020 APSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHG---IHYKVFWKLKG 1076

Query: 820  NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP----WSTYEFKVIAGNELGYGEPSSPS 875
               W +          D    +    +  V +P    ++ YE KV A N +G G P S  
Sbjct: 1077 AIEWAS----------DEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKG-PESEI 1125

Query: 876  PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI-------YYKIFWRKK 928
               ++  D P  AP +           +++W+P+   ++N           Y+K   +++
Sbjct: 1126 AVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSRENIRGKLIGHRLKYWKTTHQEE 1185

Query: 929  NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
            +   + S T +   N  + V   P  +Y+    VKV A N  G GPESE
Sbjct: 1186 DSVYYLSRTTR---NWALIVGLQPDTYYF----VKVMAYNAAGEGPESE 1227


>gi|157114683|ref|XP_001652371.1| cell adhesion molecule [Aedes aegypti]
 gi|108877190|gb|EAT41415.1| AAEL006958-PA [Aedes aegypti]
          Length = 1303

 Score = 1063 bits (2749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/983 (52%), Positives = 668/983 (67%), Gaps = 32/983 (3%)

Query: 26   ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD 85
            E  CP+HW  YR SC R  KSP K   +A+  C++   DL +V++ ++H FI+  L    
Sbjct: 77   ESYCPEHWSVYRSSCIRIYKSPRKDYINAQKICQAYQGDLISVDNIEKHSFILKLLDVDS 136

Query: 86   PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPAD--------------------- 124
             +  ++Y    Q SPN W+N D T L  ++ AF  E AD                     
Sbjct: 137  NRNNRFYISARQASPNNWINADKTQLVTIEDAFTFEAADDESYDAIFNKKALEKYDSRRN 196

Query: 125  -----NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA----SIQKLHYLLNDDRTYQ 175
                 N  R+ L YSF+   ++W F  V   +  LFICE+    S   ++ L +D R Y 
Sbjct: 197  FISGYNENRNNLVYSFNAGGEKWQFLPVNPEDLNLFICESQQLYSADNINLLADDQRQYD 256

Query: 176  YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 235
            YG+DI + +KIPRGPYFIKQP +  +D  K  I  D+ LSC AGG+P P+Y WFKE Y  
Sbjct: 257  YGVDITDINKIPRGPYFIKQPRETTYDTGKAKITKDVMLSCLAGGFPTPTYSWFKEIYTN 316

Query: 236  DRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
            D +    +DPL + R+T SGGNLII+DP+Q++D+G+YHC A N FG IISESV+L FG+I
Sbjct: 317  DNITVVKLDPLRNTRYTTSGGNLIIHDPQQIQDQGTYHCVAENIFGRIISESVELNFGYI 376

Query: 296  GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355
             EFNL+R+ E G  NWGK+++CDPP +YP V YYW+RD+FPNFVEED+RVFVS+DG+LYF
Sbjct: 377  LEFNLQRSSETGEMNWGKSLYCDPPQHYPDVRYYWSRDFFPNFVEEDQRVFVSHDGSLYF 436

Query: 356  SALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD 415
            S+LE  D  NYSCNVQS VSDTGRNGPFF L+V  H ++Q L F NNFPK FPEAP AG 
Sbjct: 437  SSLEIKDRANYSCNVQSTVSDTGRNGPFFNLQVVAHPHYQDLIFANNFPKKFPEAPVAGK 496

Query: 416  KVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
             +RLEC+AFGYPVPSYNWTRR   LPR +Y EN+NR+L I N    D GEYIC   NDR 
Sbjct: 497  DLRLECMAFGYPVPSYNWTRRNGNLPRFSYLENYNRVLVIKNSTANDNGEYICTIKNDRK 556

Query: 476  ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
            ++  SV +S+Q +PNFTIPL DK  D Q+ +T+ CEA  +PDV Y+W++N EL++ E   
Sbjct: 557  SISKSVLVSVQMQPNFTIPLKDKIKDYQSSVTFLCEASAIPDVNYTWYKNAELMDPENRK 616

Query: 536  LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
              ++D++ IQDNVL I +L+PE D  MYQC+A NQLK  YSSAQLRVL++KPSFKK+PLE
Sbjct: 617  F-NKDKFVIQDNVLKINFLDPEDDNGMYQCKATNQLKGVYSSAQLRVLSMKPSFKKKPLE 675

Query: 596  SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
            SE Y+   GN TI C PEAAP+PK VWKKDGN+IG+GG R++   G L ISP SRDD G+
Sbjct: 676  SEIYSIYNGNTTIECEPEAAPRPKIVWKKDGNVIGTGGHRRMLPTGTLFISPTSRDDEGV 735

Query: 656  YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            Y+C A+N  G+ ESK RLIVL    + EQLPPK+       L LRC    +E+LDVA++W
Sbjct: 736  YTCVASNSQGVAESKARLIVLQELRFTEQLPPKVIKQIDELLYLRCEVTYDEVLDVAFLW 795

Query: 716  THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
             HNG  I   D           +   LE+ N +  DAGEYEC+ KS V +I +KT V ++
Sbjct: 796  AHNGRIINTYDNMPAYNARFIANYNSLEVHNLTLLDAGEYECIAKSAVNRIVSKTLVFIQ 855

Query: 776  GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
            GPPG PG V+V+++ KT A+++W DG+ NGRPI +Y I+ RT WN TW NVS++V  +E+
Sbjct: 856  GPPGAPGAVKVIDIKKTDASLEWIDGSDNGRPILYYNILGRTTWNKTWVNVSQNVFAQEI 915

Query: 836  DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
            DRY GR+ A++ N L P   YEF V+A N+LG G PS PSP YNT  DKPY AP  +GGG
Sbjct: 916  DRYNGRRRATVTN-LTPGCGYEFSVVAVNDLGIGVPSLPSPLYNTQKDKPYIAPRNVGGG 974

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
            GGKIGDL+I+W+PL  E+QN+ +I+YK+F+R  N  E+ SE LK  GNVG AVV IP + 
Sbjct: 975  GGKIGDLTITWDPLLPEEQNSIDIHYKVFYRLPNQREWASEVLKRQGNVGRAVVHIPFDK 1034

Query: 956  YYTEYEVKVQAINDVGPGPESEV 978
            YYT+YEVKVQAIND+G GP S++
Sbjct: 1035 YYTKYEVKVQAINDLGEGPISDI 1057



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 37/183 (20%)

Query: 810  HYKIIARTNWNSTWF--------NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
            HYK+  R      W         NV   V+    D+Y              ++ YE KV 
Sbjct: 999  HYKVFYRLPNQREWASEVLKRQGNVGRAVVHIPFDKY--------------YTKYEVKVQ 1044

Query: 862  AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP--REKQNAPNI 919
            A N+LG G  S  +  Y +  D P  AP +          L+++W P+   R+      I
Sbjct: 1045 AINDLGEGPISDIATIY-SAEDMPQVAPQQTVARSYNSTALNVTWIPVSQTRDAIRGKLI 1103

Query: 920  YYKI-FWRKKNDTE----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             +++ +W+K++  E    F S T + +    + V   P  +Y+    VKV A N  G GP
Sbjct: 1104 GHRLKYWKKEHKEEDAVYFLSRTTRPWA---LIVGLEPDTYYF----VKVMAYNAAGEGP 1156

Query: 975  ESE 977
            ESE
Sbjct: 1157 ESE 1159


>gi|195343401|ref|XP_002038286.1| GM10750 [Drosophila sechellia]
 gi|194133307|gb|EDW54823.1| GM10750 [Drosophila sechellia]
          Length = 1390

 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/1012 (51%), Positives = 677/1012 (66%), Gaps = 69/1012 (6%)

Query: 29   CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
            CP+HWV +R +CYRF++SP +   +AK  CK+ ++DL NV++ ++H FI+  L  Q+ ++
Sbjct: 139  CPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAYNADLINVDNVEKHSFILKNLILQNQRQ 198

Query: 89   RKWYFGGTQQSPNLWVN---------EDGTNLNEL---------DAAFL----------- 119
             +++    Q  P  WVN         ED  +++E          D  FL           
Sbjct: 199  NRFFISARQTGPLNWVNDDNTQLVQIEDSFSMDEQVPLENEDLHDNRFLVQNDLNNQNIN 258

Query: 120  -----------------------------PEPADNVQRDYLAYSFSQSLKRWGFERVTGM 150
                                         P   +   RD + Y+FS+   RW F     +
Sbjct: 259  NPNQFYNSLPGTVNQRNQNNLRGFIGPNQPYGDNRYVRDRVVYAFSKKRDRWMFMPAYEI 318

Query: 151  EPLLFICEASI----QKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKR 206
            E  LFICE+ +      ++  L+D R Y YG++I + ++IPRGPYF+KQP D  FD++K 
Sbjct: 319  ELNLFICESKVLYSSDNVNIKLDDKRPYHYGLNINDMERIPRGPYFVKQPNDTTFDVNKN 378

Query: 207  SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
             ++ND+TLSC A GYP PSY W++E YV DRL    IDPL+  R+T+SGGNLII +P+Q 
Sbjct: 379  RLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQA 438

Query: 267  EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
             D+G+YHC A NKFG I SES  L FGFI EFNLKR+ E    NWGK++FCDPP +YP V
Sbjct: 439  LDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGKSIFCDPPQHYPDV 498

Query: 327  NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
             YYWARDYFPNFVEED+RVFVS DGALYFS +E +D  NYSC VQ+ VSDTGRNGPFFPL
Sbjct: 499  RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPL 558

Query: 387  KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            +V P+SN+Q L F N FPK FPEAP AGD++RLEC+AFGYP+PSYNWTR+G PL RNAY 
Sbjct: 559  RVTPNSNYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPIPSYNWTRQGLPLQRNAYT 618

Query: 447  ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
             N+ R+L I N    D GEY C  +N R  L  S+ I+IQ  P FTIPL D   D  +D+
Sbjct: 619  INYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDV 678

Query: 507  TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
            T+ CEAF +PD  Y+W++N E L+   +   ++DRY IQDNVLTI++L  ++D AMYQC 
Sbjct: 679  TFICEAFAIPDANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDDAMYQCG 735

Query: 567  AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
            A+NQLKT +SSAQLRVL++KPSFKK PLESE YA   GN TI C+PEAAP+PKF WKKDG
Sbjct: 736  AQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDG 795

Query: 627  NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
             +IGSGG R+I  +G L I+P SRDD GIY+C A+N  G DES  R+IVL    + E  P
Sbjct: 796  QVIGSGGHRRILPSGTLTIAPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPP 855

Query: 687  PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
             +I    H  + L C A  +ELLD+AY+W HNG  + N   N   T  I +D   L + N
Sbjct: 856  QRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWNRLTVHN 912

Query: 747  ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
             S  DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W DG+ NGR
Sbjct: 913  TSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSNNGR 972

Query: 807  PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
             I +Y I+ RTNWN TW NVS HV  +EVDRYT R++A + N L PWS YEF V A N+L
Sbjct: 973  AIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSVTAVNDL 1031

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
            G G PS+PSP Y+T  DKPY AP  +GGGGGKIGDL+I+W+PL  ++Q++  I+YK+FW+
Sbjct: 1032 GIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWK 1091

Query: 927  KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             K   E+ S+ +K+  ++G+AVV IP   YYTEYEVKVQAIN+VG GPESE+
Sbjct: 1092 LKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINNVGKGPESEI 1143



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 853  WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
            ++ YE KV A N +G G P S     ++  D P  AP +           +++W+P+   
Sbjct: 1122 YTEYEVKVQAINNVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180

Query: 913  KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
            ++N           Y+K   ++++   + S T +   N  + V   P  +Y+    VKV 
Sbjct: 1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1233

Query: 966  AINDVGPGPESE 977
            A N  G GPESE
Sbjct: 1234 AYNAAGEGPESE 1245


>gi|195153264|ref|XP_002017549.1| GL21461 [Drosophila persimilis]
 gi|194112606|gb|EDW34649.1| GL21461 [Drosophila persimilis]
          Length = 1409

 Score = 1047 bits (2707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/1031 (51%), Positives = 682/1031 (66%), Gaps = 76/1031 (7%)

Query: 12   VSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDA 71
            VS+  ++S   DE    CP++WV +R +CYRF++SP +   +AK  CK+ ++DL NV++ 
Sbjct: 144  VSYRDMYS---DEDNF-CPEYWVSFRQTCYRFIRSPKRNWAEAKKICKAYNADLLNVDNL 199

Query: 72   DEHGFIMYQLFWQDPQRRKWYFGGTQQSPN-----------------------LWVNED- 107
            ++H FI+  L  Q+ ++ +++    Q  P                         W NED 
Sbjct: 200  EKHAFILKNLILQNHRQNRFFISARQTGPQNWVNDDNTQLVQIEDSFAFDEEQPWENEDL 259

Query: 108  --------------GTNLNELDAAFLPEPADNVQR----------------------DYL 131
                            NLN  +  +   P +  QR                      D +
Sbjct: 260  HDNRFLVQNDLISRNRNLNNPNQFYNAVPGNVNQRNQNNLRGFIGPNQPFGDNGYVRDRV 319

Query: 132  AYSFSQSLKRWGFERVTGMEPLLFICEASI----QKLHYLLNDDRTYQYGMDIENPDKIP 187
             Y++S+   RW F     +E  LFICE+ +      ++  L+D R Y YG+DI + ++IP
Sbjct: 320  VYAYSKKRDRWMFMPAYEIELNLFICESRVLYSPDNVNIKLDDKRPYHYGLDIRDIERIP 379

Query: 188  RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
            RGPYF+KQP D  FD++K  ++ND+TLSC AGG+P PSY W++E YV D L    IDPL+
Sbjct: 380  RGPYFVKQPNDTTFDVNKNRLINDVTLSCLAGGFPTPSYYWYREVYVNDTLEYQKIDPLA 439

Query: 248  DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              R+T+SGGNLII  P+Q  D+G+YHC A NKFG I SES  L FGFI EFNLKR+ E  
Sbjct: 440  QDRYTISGGNLIIYAPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETS 499

Query: 308  NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
              NWGK++FCDPP +YP V YYWARDYFPNFVEED+RVFVS DGALYFS +E +D  NYS
Sbjct: 500  EMNWGKSIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYS 559

Query: 368  CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP 427
            C VQ+ VSDTGRNGPFF L+V P+SN+Q L F N FPK FPEAP AG ++RLEC+AFGYP
Sbjct: 560  CTVQTLVSDTGRNGPFFALRVTPNSNYQALIFANTFPKVFPEAPVAGSEIRLECMAFGYP 619

Query: 428  VPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
            +PSYNWTR+G PL RNAY  N+ R+L I N    D GEY C  SN R  LE S+ I+IQ 
Sbjct: 620  IPSYNWTRKGLPLQRNAYTANYGRVLIIQNATTNDNGEYSCTISNPRKTLEKSIYINIQM 679

Query: 488  EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
             P FTIPL D   D  +D+T+ CEAF +PD  Y+W++N E L+  T+   ++DRY IQDN
Sbjct: 680  RPEFTIPLKDMIKDYNSDVTFICEAFSIPDANYTWYKNAERLDPLTI---NRDRYVIQDN 736

Query: 548  VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            VLTI++L  E+D  MYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA   GN T
Sbjct: 737  VLTIKFLEREKDEGMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTT 796

Query: 608  IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
            I C+PEAAP+PKF WKKDG ++GSGG R+I  +G L+ISP SRDD G+Y+C+A+N  G D
Sbjct: 797  IVCDPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCSASNQAGTD 856

Query: 668  ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 727
            ES  R+IVL    + +  P +I    H  + L C A  +ELLD+AY+W HNG  + N   
Sbjct: 857  ESHARVIVLQEIRFIQTPPQRIVSKEHDLIYLHCEAAYDELLDIAYVWKHNGEILKN--- 913

Query: 728  NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
            N   T  I ++   L + N +  DAG+YECVVKS V +IS+KT+V++EG PG PGGVQV+
Sbjct: 914  NHDGTERIIVNWNRLTVHNTTMRDAGDYECVVKSAVNEISSKTSVVIEGAPGAPGGVQVI 973

Query: 788  EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            ++ KT A I+W DGA NGR I +Y I+ RTNWN TW NVS HV  +EVDRYT R++A + 
Sbjct: 974  QISKTKAIIEWVDGANNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVV 1033

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
            N L PWS YEF V A N+LG G PS+PSP Y+T  DKPY AP ++GGGGGKIGDL+I+W+
Sbjct: 1034 N-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRKVGGGGGKIGDLTITWD 1092

Query: 908  PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
            PL  E+Q++  I YK+FW+ K   E+ ++ + +  N+G+AVV IP   YYTEYEVKVQAI
Sbjct: 1093 PLLPEEQHSHGIRYKVFWKLKGALEWATDEITK-QNMGVAVVNIPLNNYYTEYEVKVQAI 1151

Query: 968  NDVGPGPESEV 978
            N +G GPESEV
Sbjct: 1152 NSIGKGPESEV 1162



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 15/132 (11%)

Query: 853  WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
            ++ YE KV A N +G G P S     ++  D P  AP +           +++W P+   
Sbjct: 1141 YTEYEVKVQAINSIGKG-PESEVAIIHSAEDMPQVAPQKPFAMPFNSTCFNVTWSPIDMS 1199

Query: 913  KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
            ++N           Y+K   ++++   + S T +   N  + V   P  +Y+    VKV 
Sbjct: 1200 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1252

Query: 966  AINDVGPGPESE 977
            A N  G GPESE
Sbjct: 1253 AYNAAGEGPESE 1264


>gi|125777441|ref|XP_001359608.1| GA10588 [Drosophila pseudoobscura pseudoobscura]
 gi|54639356|gb|EAL28758.1| GA10588 [Drosophila pseudoobscura pseudoobscura]
          Length = 1409

 Score = 1046 bits (2705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/1031 (50%), Positives = 682/1031 (66%), Gaps = 76/1031 (7%)

Query: 12   VSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDA 71
            VS+  ++S   DE    CP++WV +R +CYRF++SP +   +AK  CK+ ++DL NV++ 
Sbjct: 144  VSYRDMYS---DEDNF-CPEYWVSFRQTCYRFIRSPKRNWAEAKKICKAYNADLLNVDNL 199

Query: 72   DEHGFIMYQLFWQDPQRRKWYFGGTQQSPN-----------------------LWVNED- 107
            ++H FI+  L  Q+ ++ +++    Q  P                         W NED 
Sbjct: 200  EKHAFILKNLILQNHRQNRFFISARQTGPQNWVNDDNTQLVQIEDSFAFDEEQPWENEDL 259

Query: 108  --------------GTNLNELDAAFLPEPADNVQR----------------------DYL 131
                            NLN  +  +   P +  QR                      D +
Sbjct: 260  HDNRFLVQNDLISRNRNLNNPNQFYNAVPGNVNQRNQNNLRGFIGPNQPFGDNGYVRDRV 319

Query: 132  AYSFSQSLKRWGFERVTGMEPLLFICEASI----QKLHYLLNDDRTYQYGMDIENPDKIP 187
             Y++S+   RW F     +E  LFICE+ +      ++  L+D R Y YG+DI + ++IP
Sbjct: 320  VYAYSKKRDRWMFMPAYEIELNLFICESRVLYSPDNVNIKLDDKRPYHYGLDIRDIERIP 379

Query: 188  RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
            RGPYF+KQP D  FD++K  ++ND+TLSC AGG+P PSY W++E YV D L    IDPL+
Sbjct: 380  RGPYFVKQPNDTTFDVNKNRLINDVTLSCLAGGFPTPSYYWYREVYVNDTLEYQKIDPLA 439

Query: 248  DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              R+T+SGGNLII  P+Q  D+G+YHC A N+FG I SES  L FGFI EFNLKR+ E  
Sbjct: 440  QDRYTISGGNLIIYAPKQALDQGAYHCVAENRFGRIRSESAHLNFGFIMEFNLKRSAETS 499

Query: 308  NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
              NWGK++FCDPP +YP V YYWARDYFPNFVEED+RVFVS DGALYFS +E +D  NYS
Sbjct: 500  EMNWGKSIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYS 559

Query: 368  CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP 427
            C VQ+ VSDTGRNGPFF L+V P+SN+Q L F N FPK FPEAP AG ++RLEC+AFGYP
Sbjct: 560  CTVQTLVSDTGRNGPFFALRVTPNSNYQALIFANTFPKVFPEAPVAGSEIRLECMAFGYP 619

Query: 428  VPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
            +PSYNWTR+G PL RNAY  N+ R+L I N    D GEY C  SN R  LE S+ I+IQ 
Sbjct: 620  IPSYNWTRKGLPLQRNAYTANYGRVLIIQNATTNDNGEYSCTISNPRKTLEKSIYINIQM 679

Query: 488  EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
             P FTIPL D   D  +D+T+ CEAF +PD  Y+W++N E L+  T+   ++DRY IQDN
Sbjct: 680  RPEFTIPLKDMIKDYNSDVTFICEAFSIPDANYTWYKNAERLDPLTI---NRDRYVIQDN 736

Query: 548  VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            VLTI++L  E+D  MYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA   GN T
Sbjct: 737  VLTIKFLEREKDEGMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTT 796

Query: 608  IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
            I C+PEAAP+PKF WKKDG ++GSGG R+I  +G L+ISP SRDD G+Y+C+A+N  G D
Sbjct: 797  IVCDPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCSASNQAGTD 856

Query: 668  ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 727
            ES  R+IVL    + +  P +I    H  + L C A  +ELLD+AY+W HNG  + N   
Sbjct: 857  ESHARVIVLQEIRFIQTPPQRIVSKEHDLIYLHCEAAYDELLDIAYVWKHNGEILKN--- 913

Query: 728  NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
            N   T  I ++   L + N +  DAG+YECVVKS V +IS+KT+V++EG PG PGGVQV+
Sbjct: 914  NHDGTERIIVNWNRLTVHNTTMRDAGDYECVVKSAVNEISSKTSVVIEGAPGAPGGVQVI 973

Query: 788  EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            ++ KT A I+W DGA NGR I +Y I+ RTNWN TW NVS HV  +EVDRYT R++A + 
Sbjct: 974  QISKTKAIIEWVDGANNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVV 1033

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
            N L PWS YEF V A N+LG G PS+PSP Y+T  DKPY AP ++GGGGGKIGDL+I+W+
Sbjct: 1034 N-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRKVGGGGGKIGDLTITWD 1092

Query: 908  PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
            PL  E+Q++  I YK+FW+ K   E+ ++ + +  N+G+AVV IP   YYTEYEVKVQAI
Sbjct: 1093 PLLPEEQHSHGIRYKVFWKLKGALEWATDEITK-QNMGVAVVNIPLNNYYTEYEVKVQAI 1151

Query: 968  NDVGPGPESEV 978
            N +G GPESEV
Sbjct: 1152 NSIGKGPESEV 1162



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 15/132 (11%)

Query: 853  WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
            ++ YE KV A N +G G P S     ++  D P  AP +           +++W P+   
Sbjct: 1141 YTEYEVKVQAINSIGKG-PESEVAIIHSAEDMPQVAPQKPFAMPFNSTCFNVTWSPIDMS 1199

Query: 913  KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
            ++N           Y+K   ++++   + S T +   N  + V   P  +Y+    VKV 
Sbjct: 1200 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1252

Query: 966  AINDVGPGPESE 977
            A N  G GPESE
Sbjct: 1253 AYNAAGEGPESE 1264


>gi|321454618|gb|EFX65782.1| hypothetical protein DAPPUDRAFT_303516 [Daphnia pulex]
          Length = 1134

 Score = 1041 bits (2693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/882 (56%), Positives = 644/882 (73%), Gaps = 16/882 (1%)

Query: 111 LNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLND 170
           +  LD AFLP      ++D+L+Y +S S ++WG  RV G +PLL+ICE  + +++ L  +
Sbjct: 1   MMNLDTAFLPNQETVFEKDFLSYGYSLSARQWGLLRVDGKDPLLYICEIPVNQVNLLDME 60

Query: 171 DRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFK 230
           DRT+QYG+ + +  +IPRGPYFI+QP  VVFDL++R  LN +TLSC A GYP P ++W+K
Sbjct: 61  DRTFQYGIVVNDITRIPRGPYFIRQPVPVVFDLTRRKTLNQVTLSCIANGYPTPEFQWYK 120

Query: 231 EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL 290
           ED+  D+LV+  IDPL   R T+SGG LII +P +++DRG YHC ASN++GSI+SESVQL
Sbjct: 121 EDFESDQLVSKRIDPLLMPRHTVSGGLLIITNPEEIKDRGKYHCVASNQYGSIVSESVQL 180

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
           +FGFIGEFNLKR+ E G ++WGKA++CDPP  +P + YYW RD FPNFVEED R FVS+D
Sbjct: 181 SFGFIGEFNLKRSSENGLEHWGKAIYCDPPQYFPDIQYYWVRDVFPNFVEEDSRTFVSFD 240

Query: 351 GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA 410
           G LYFS+LE ID G YSCNVQS VS  GRNGPFF ++V  H N+QQLKFPNNFPK+FPEA
Sbjct: 241 GNLYFSSLENIDRGRYSCNVQSTVSSNGRNGPFFSVEVRQHPNYQQLKFPNNFPKSFPEA 300

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
           P+ G+ VRLECVAFGYPVP+YNWTR+G+PLP+     N+NRIL +P VKVED GEY+CRA
Sbjct: 301 PRVGEDVRLECVAFGYPVPNYNWTRKGAPLPKGVVITNYNRILVLPKVKVEDMGEYVCRA 360

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
           +ND+ ++E SVT+S+QA P FTIPL D HMD   DL WTCEAFG+PDV Y W RNG++L+
Sbjct: 361 TNDKVSIEGSVTVSVQATPVFTIPLGDMHMDRGEDLLWTCEAFGIPDVNYLWLRNGQVLD 420

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
             +L   D++R+ I++NVL IR L+P+RD AMYQC+A NQ+  RYSS QLR+L +KPSF 
Sbjct: 421 PLSLEQGDRERFEIRENVLIIRKLDPDRDQAMYQCKASNQIAERYSSGQLRILDIKPSFA 480

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
           K+PLES+ YA +GGNVTI CNPEAAP+PK+VW+KDG  IGSGGRR I  +G+LLI+PVS 
Sbjct: 481 KKPLESDIYAADGGNVTIACNPEAAPRPKYVWRKDGFAIGSGGRRIILPSGHLLINPVSM 540

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D G ++CTA N  G D S GR+IVL GP + EQ P +I     +  QLRC A  E +LD
Sbjct: 541 EDVGNFTCTAENRFGSDSSTGRVIVLRGPVFVEQPPNRILTTVGQTEQLRCRASAEGILD 600

Query: 711 VAYIWTHNGVRI----GNMDLNE-LETPN-INIDGGLLEITNASFADAGEYECVVKSTVG 764
           +AYIW HNG+ +      +D ++ LE  + I    G LEI N +   AGEYECV K++VG
Sbjct: 601 LAYIWKHNGITLRFDSSPVDFHDNLEAAHYIRSREGSLEINNITLGQAGEYECVAKTSVG 660

Query: 765 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
           +ISTKT + V GPPG  GGVQV+E+  +SA ++WTDGATNG PI  Y +  RTNWN TW 
Sbjct: 661 RISTKTHLFVYGPPGAVGGVQVLELTSSSAVLRWTDGATNGDPIRLYMVEGRTNWNQTWS 720

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
            ++ ++  K+VDR T RKEA + N + P+STYEF++ A N LGYG  S PSPQYNT  D+
Sbjct: 721 VLAMNITAKDVDRLTSRKEAQLINTVSPYSTYEFRISAANTLGYGPSSIPSPQYNTRPDR 780

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--------KNDTEFQSE 936
            +Q P+ +GGGGGK GDL+I+W P   ++QNA   YYK+FWR+          ++E+QS+
Sbjct: 781 IFQPPTNVGGGGGKTGDLTITWTPFVGQQQNASGTYYKVFWRRLAGVDADVTEESEYQSQ 840

Query: 937 TLKEYGNVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +K   + G  +A V     +YYT Y+VKVQ  NDVG G ES
Sbjct: 841 IVKHSRSAGLFVATVDRNRRYYYTPYKVKVQGCNDVGCGQES 882



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 179/838 (21%), Positives = 310/838 (36%), Gaps = 145/838 (17%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHC------ 274
           +P+  Y W ++      +  N ++  S + F    GNL  +    + DRG Y C      
Sbjct: 213 FPDIQYYWVRD------VFPNFVEEDS-RTFVSFDGNLYFSSLENI-DRGRYSCNVQSTV 264

Query: 275 KASNKFGSIISESV-------QLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN 327
            ++ + G   S  V       QL F      +   AP +G     + +       YP  N
Sbjct: 265 SSNGRNGPFFSVEVRQHPNYQQLKFPNNFPKSFPEAPRVGEDVRLECV----AFGYPVPN 320

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC-------NVQSKVSDTGRN 380
           Y W R   P        V  +Y+  L    ++  D G Y C       +++  V+ + + 
Sbjct: 321 YNWTRKGAP---LPKGVVITNYNRILVLPKVKVEDMGEYVCRATNDKVSIEGSVTVSVQA 377

Query: 381 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
            P F +   P  +    +               G+ +   C AFG P  +Y W R G  L
Sbjct: 378 TPVFTI---PLGDMHMDR---------------GEDLLWTCEAFGIPDVNYLWLRNGQVL 419

Query: 441 P-------RNAYFENFNRILTIPNVKVE-DQGEYICRASNDRSALESSVTISI-QAEPNF 491
                       FE    +L I  +  + DQ  Y C+ASN  +   SS  + I   +P+F
Sbjct: 420 DPLSLEQGDRERFEIRENVLIIRKLDPDRDQAMYQCKASNQIAERYSSGQLRILDIKPSF 479

Query: 492 TI-PL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVL 549
              PL +D +  +  ++T  C     P   Y W ++G  + S         R  +    L
Sbjct: 480 AKKPLESDIYAADGGNVTIACNPEAAPRPKYVWRKDGFAIGS------GGRRIILPSGHL 533

Query: 550 TIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF 609
            I  ++ E D   + C A+N+  +  S+ ++ VL      ++ P    T  G+   +   
Sbjct: 534 LINPVSME-DVGNFTCTAENRFGSDSSTGRVIVLRGPVFVEQPPNRILTTVGQTEQLRCR 592

Query: 610 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------------GNLLISPVSRDDSGIYS 657
            + E      ++WK +G  +        F +            G+L I+ ++   +G Y 
Sbjct: 593 ASAEGILDLAYIWKHNGITLRFDSSPVDFHDNLEAAHYIRSREGSLEINNITLGQAGEYE 652

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA----- 712
           C A    G   +K  L V   P           +   + L+L  S+      D A     
Sbjct: 653 CVAKTSVGRISTKTHLFVYGPPG---------AVGGVQVLELTSSSAVLRWTDGATNGDP 703

Query: 713 -------------YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 759
                          W+   + I   D++ L +     +  L  I   S     E+    
Sbjct: 704 IRLYMVEGRTNWNQTWSVLAMNITAKDVDRLTSRK---EAQL--INTVSPYSTYEFRISA 758

Query: 760 KSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD--GATNGRPI 808
            +T+G         + +T+   I + P      V          TI WT   G       
Sbjct: 759 ANTLGYGPSSIPSPQYNTRPDRIFQPPTN----VGGGGGKTGDLTITWTPFVGQQQNASG 814

Query: 809 THYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAG 863
           T+YK+    +A  + + T  +  +  I K   R  G   A+++ N    ++ Y+ KV   
Sbjct: 815 TYYKVFWRRLAGVDADVTEESEYQSQIVKH-SRSAGLFVATVDRNRRYYYTPYKVKVQGC 873

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP--LPREKQNAPNIYY 921
           N++G G+  SP     +  D P  AP+++         L+++W P  L R++     I +
Sbjct: 874 NDVGCGQ-ESPEVSIYSAEDVPQVAPNQVAARAFNSTSLNVTWLPMDLSRKQMRGNMIGF 932

Query: 922 KI-FWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           +I +WR+++  +     L +   N  + V  +P  +Y+    V+V A N  G GP+SE
Sbjct: 933 RIKYWRRQDKEDASVFYLSRSTRNEALIVGLMPDTYYW----VRVMAYNGAGEGPQSE 986


>gi|347962989|ref|XP_311153.3| AGAP000007-PA [Anopheles gambiae str. PEST]
 gi|333467411|gb|EAA06433.3| AGAP000007-PA [Anopheles gambiae str. PEST]
          Length = 1332

 Score = 1014 bits (2622), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/1007 (49%), Positives = 661/1007 (65%), Gaps = 60/1007 (5%)

Query: 29   CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
            CP+HW  +R +C R  KSP K+   A+  C++   +L +V+  ++H F++  L     + 
Sbjct: 85   CPEHWAAFRGTCLRVHKSPRKSWYAAQKICQAYQGELISVDTIEKHSFVVRLLDRDVSKL 144

Query: 89   RKWYFGGTQQSPNLWVNEDGTNLNELDAA-----FLPEPADNVQ---------------- 127
             ++Y    Q SP  WVN D + L  ++ A        + AD  Q                
Sbjct: 145  NRYYVSARQVSPGNWVNADKSQLIAIEDAINYELLSADTADEFQSYFEGANVRNAVEQGE 204

Query: 128  ------------------RDYLAYSFSQSLKRWGFERVTGMEPLLFICEA----SIQKLH 165
                              R+YL   F+   ++W F  VTG E  LF+CE+    S   L+
Sbjct: 205  AEGENDPRRYYQSERYRNRNYLVLGFNMHKEKWQFYPVTGEEQYLFVCESRTLYSQDNLN 264

Query: 166  YLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPS 225
             LL D R + YG++  + +KIPRGPYFI+QP D  +D  K SI  D+TLSC AGGYP P 
Sbjct: 265  TLLEDRRQFDYGLEQTDVEKIPRGPYFIRQPVDTTYDTGKASITRDVTLSCLAGGYPTPR 324

Query: 226  YEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIIS 285
            Y W+KE+YV+D L    IDPL + R T+SGGNLII+ P Q  D+G+YHC A N +G I+S
Sbjct: 325  YTWYKEEYVKDNLTVIQIDPLRNARHTVSGGNLIIHRPSQNLDQGTYHCTAQNAYGKILS 384

Query: 286  ESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV 345
            ESVQL FG+I EFNL+RAPE G +NWGKA+ C+ P +YP V +YW+R+YFPNFV ED+RV
Sbjct: 385  ESVQLNFGYILEFNLQRAPEKGEENWGKALVCEEPQHYPDVKFYWSRNYFPNFVYEDQRV 444

Query: 346  FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPK 405
            FVS+DG+LYFS+LE +D  NYSC V S VSDTGRNGPFF L V P  ++Q L F N FPK
Sbjct: 445  FVSHDGSLYFSSLEVMDRANYSCTVMSTVSDTGRNGPFFELSVSPSPHYQDLIFANTFPK 504

Query: 406  TFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGE 465
             FP+ P AG  VRLEC+ +GYPV SYNWTRR   LPR +  EN+NR+L I N  V D GE
Sbjct: 505  AFPKVPLAGKDVRLECMTYGYPVASYNWTRRNGNLPRLSRLENYNRVLLIQNATVNDNGE 564

Query: 466  YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRN 525
            Y+C A N + ++  S+ +++Q EPNFTIPL D+  D Q+ +++ CEA+ +PDV Y+W++N
Sbjct: 565  YVCTARNGKKSITQSIFLNVQMEPNFTIPLRDRTKDFQSSVSFLCEAYAMPDVNYTWYKN 624

Query: 526  GELLNSETLP---LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
            GEL+  ++       ++D+Y IQDN+L I YL+PE D  MYQC+A NQLK  YS+AQLRV
Sbjct: 625  GELMEEDSATGGGRLNRDKYTIQDNLLKINYLDPEEDNGMYQCKATNQLKGVYSAAQLRV 684

Query: 583  LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN 642
            L++KPSFKKRPLESE Y+   GN TI C PEAAP PK VWKKDGN+IGSGG RKI+  G 
Sbjct: 685  LSMKPSFKKRPLESEIYSIANGNTTIRCEPEAAPTPKIVWKKDGNVIGSGGHRKIYPTGT 744

Query: 643  LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
            L ISP SRDD G Y+C A+N  GM ESK RLIVL    + EQLPPK        L LRC 
Sbjct: 745  LHISPTSRDDEGTYTCIASNTQGMAESKARLIVLQELRFTEQLPPKQIKQIGEMLFLRCD 804

Query: 703  AHTEELLDVAYIWTHNG-VRIGNMDLNEL-----------ETPNINIDGGLLEITNASFA 750
               ++LLDVA++WTHNG +  G+ D +E            +   I I    LE+ N +  
Sbjct: 805  VTYDQLLDVAFVWTHNGQLLTGHDDADEQRLRQQPIGPAPDGARIRIHYNTLEVHNLTLV 864

Query: 751  DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 810
            D GEYECV KS+V +I ++ TV+++GPPG PG V+V+++ KT A ++WT+G  NGRPI +
Sbjct: 865  DGGEYECVAKSSVNRIVSRATVLIQGPPGAPGAVKVIDIKKTEALLEWTNGNDNGRPILY 924

Query: 811  YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
            Y I+ RTNWN TW NVS HV+ +E DRY GR++A++ N L PW  YE   +A N+LG G 
Sbjct: 925  YNILGRTNWNRTWVNVSTHVVAQEADRYNGRRQATVTN-LTPWCGYEI-CVAVNDLGLGT 982

Query: 871  PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930
            PS PSP Y+T  D+PY AP  +GGGGGKIGDL+I+W+PL   +QN+ +++Y++F+R    
Sbjct: 983  PSLPSPMYSTLKDRPYIAPRNVGGGGGKIGDLTITWDPLAPHEQNSIDVHYRVFYRLHGQ 1042

Query: 931  TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
             E+ SE L+  GNVG AV+ +P++ YYT YEVKVQA+ND+G GP SE
Sbjct: 1043 REWASEELQRQGNVGKAVIHVPTDKYYTRYEVKVQAVNDLGVGPISE 1089



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 164/730 (22%), Positives = 253/730 (34%), Gaps = 137/730 (18%)

Query: 323  YPGVNYYWAR--DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN 380
            YP  +Y W R     P     +     +Y+  L        D G Y C        T RN
Sbjct: 525  YPVASYNWTRRNGNLPRLSRLE-----NYNRVLLIQNATVNDNGEYVC--------TARN 571

Query: 381  GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD---KVRLECVAFGYPVPSYNWTRRG 437
            G     K    S F  ++   NF  T P   +  D    V   C A+  P  +Y W + G
Sbjct: 572  GK----KSITQSIFLNVQMEPNF--TIPLRDRTKDFQSSVSFLCEAYAMPDVNYTWYKNG 625

Query: 438  -----------SPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI- 485
                         L R+ Y    N +        ED G Y C+A+N    + S+  + + 
Sbjct: 626  ELMEEDSATGGGRLNRDKYTIQDNLLKINYLDPEEDNGMYQCKATNQLKGVYSAAQLRVL 685

Query: 486  QAEPNFTI-PL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
              +P+F   PL ++ +     + T  CE    P     W ++G ++ S         R  
Sbjct: 686  SMKPSFKKRPLESEIYSIANGNTTIRCEPEAAPTPKIVWKKDGNVIGS------GGHRKI 739

Query: 544  IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
                 L I   + + D   Y C A N      S A+L VL      ++ P +     GE 
Sbjct: 740  YPTGTLHISPTSRD-DEGTYTCIASNTQGMAESKARLIVLQELRFTEQLPPKQIKQIGEM 798

Query: 604  GNVTIFCNPEAAPKPKFVWKKDGNIIGS-------------------GGRRKIFENGNLL 644
              +      +      FVW  +G ++                     G R +I  N  L 
Sbjct: 799  LFLRCDVTYDQLLDVAFVWTHNGQLLTGHDDADEQRLRQQPIGPAPDGARIRIHYN-TLE 857

Query: 645  ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
            +  ++  D G Y C A +      S+  +++        Q PP     A   +++     
Sbjct: 858  VHNLTLVDGGEYECVAKSSVNRIVSRATVLI--------QGPP----GAPGAVKVIDIKK 905

Query: 705  TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA-DAGEYECVVKSTV 763
            TE LL+    WT NG   G   L        N +   + ++    A +A  Y    ++TV
Sbjct: 906  TEALLE----WT-NGNDNGRPILYYNILGRTNWNRTWVNVSTHVVAQEADRYNGRRQATV 960

Query: 764  G--------KISTKTTVIVEGPPGLPG---------------GVQVVEVHKTSATIQWTD 800
                     +I      +  G P LP                 V          TI W  
Sbjct: 961  TNLTPWCGYEICVAVNDLGLGTPSLPSPMYSTLKDRPYIAPRNVGGGGGKIGDLTITWDP 1020

Query: 801  GATNGRPI--THYKIIARTNWNSTWF--------NVSEHVIGKEVDRYTGRKEASIENVL 850
             A + +     HY++  R +    W         NV + VI    D+Y            
Sbjct: 1021 LAPHEQNSIDVHYRVFYRLHGQREWASEELQRQGNVGKAVIHVPTDKY------------ 1068

Query: 851  VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
              ++ YE KV A N+LG G  S P   ++   D P  AP +          L+++W P+ 
Sbjct: 1069 --YTRYEVKVQAVNDLGVGPISEPVEIFSA-EDMPQVAPQQTIARSFNSTALNVTWVPVS 1125

Query: 911  --REKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
              RE      I +++ +W+K+++ E     L         +V +  + YY    VKV A 
Sbjct: 1126 QTRETIRGKLIGHRLKYWKKEHNEEDSVYYLSRTTRPWALIVGLEPDTYYF---VKVMAY 1182

Query: 968  NDVGPGPESE 977
            N  G GPESE
Sbjct: 1183 NAAGEGPESE 1192


>gi|195497051|ref|XP_002095937.1| GE25412 [Drosophila yakuba]
 gi|194182038|gb|EDW95649.1| GE25412 [Drosophila yakuba]
          Length = 1390

 Score = 1013 bits (2618), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/855 (57%), Positives = 613/855 (71%), Gaps = 11/855 (1%)

Query: 128  RDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI----QKLHYLLNDDRTYQYGMDIENP 183
            RD + Y+FS+   RW F     +E  LFICEA +      ++  L+D R Y YG+DI + 
Sbjct: 296  RDRVVYAFSKKRDRWMFMPAYEIELNLFICEAKVLYSSDNVNIKLDDKRPYHYGLDINDM 355

Query: 184  DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
            ++IPRGPYF+KQP D  FD++K  ++ND+TLSC A GYP PSY W++E Y+ DRL    I
Sbjct: 356  ERIPRGPYFVKQPNDTTFDVNKNRLINDVTLSCLASGYPTPSYTWYREVYIDDRLEYQKI 415

Query: 244  DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
            DPL   RFT+SGGNLII +P+Q  D+G+YHC A NKFG I SES  L FGFI EFNLKR+
Sbjct: 416  DPLVQDRFTISGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRS 475

Query: 304  PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
             E    NWGK++FCDPP +YP V YYWARDYFPNFVEED+RVFVS DGALYFS +E +D 
Sbjct: 476  AETSEMNWGKSIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDR 535

Query: 364  GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
             NYSC VQ+ VSDTGRNGPFFPL+V P+SN+Q L F N FPK FPEAP AGD++RLEC+A
Sbjct: 536  ANYSCTVQTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDEIRLECMA 595

Query: 424  FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
            FGYP+PSYNWTR G PL RNAY  N+ R+L I N    D GEY C  +N R  L  S+ I
Sbjct: 596  FGYPIPSYNWTRPGLPLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYI 655

Query: 484  SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            +IQ  P FTIPL D   D  +D+T+ CEAF +PD  Y+W++N E L+  T+   ++DR+ 
Sbjct: 656  NIQMRPQFTIPLKDMIKDYNSDVTFICEAFAMPDANYTWYKNAERLDPATI---NRDRFI 712

Query: 544  IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
            IQDNVLTI++L  ++D AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA   
Sbjct: 713  IQDNVLTIKFLEKDKDDAMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYN 772

Query: 604  GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
            GN TI C+PEAAP+PKF WKKDG +IGSGG R+I  +G L I+P SRDD GIY+C A+N 
Sbjct: 773  GNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTIAPTSRDDEGIYTCIASNQ 832

Query: 664  HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
             G DES  R+IVL    + E  P +I    H  + L C A  +ELLD+AY+W HNG  + 
Sbjct: 833  AGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEILK 892

Query: 724  NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
            N   N   T  I ID   L + N S  DAG+YECVVKS V +IS+KT+V +EG PG PGG
Sbjct: 893  N---NHDGTGRIIIDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGG 949

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            VQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV  +EVDRYT R++
Sbjct: 950  VQVIQISKTKAIIEWVDGSNNGRAIRYYNILGRTNWNRTWVNVSTHVKAREVDRYTSRQQ 1009

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            A + N L PWS YEF V A N+LG G PS+PSP Y+T  DKPY AP  +GGGGGKIGDL+
Sbjct: 1010 AEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPKNVGGGGGKIGDLT 1068

Query: 904  ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
            I+W+PL  ++Q++  I+YK+FW+ K   E+ S+ +++  ++G+AVV IP   YYTEYEVK
Sbjct: 1069 ITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIRKQDHMGVAVVNIPLNNYYTEYEVK 1128

Query: 964  VQAINDVGPGPESEV 978
            VQAIN VG GPESE+
Sbjct: 1129 VQAINSVGKGPESEI 1143



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 4/107 (3%)

Query: 12  VSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDA 71
           VS+   F+   DE    CP+HWV +R +CYRF++SP +   +AK  CK+ ++DL NV++ 
Sbjct: 126 VSYRDAFT---DEDNF-CPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAYNADLINVDNV 181

Query: 72  DEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAF 118
           ++H FI+  L  Q+ ++ +++    Q  P  WVN+D T L ++D +F
Sbjct: 182 EKHSFILKNLILQNQRQNRFFISARQTGPLNWVNDDNTQLVQIDDSF 228



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 853  WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
            ++ YE KV A N +G G P S     ++  D P  AP +           +++W+P+   
Sbjct: 1122 YTEYEVKVQAINSVGKG-PESEITVIHSAEDMPQVAPQKPIALAYNSTCFNVTWKPIDMS 1180

Query: 913  KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
            ++N           Y+K   ++++   + S T +   N  + V   P  +Y+    VKV 
Sbjct: 1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1233

Query: 966  AINDVGPGPESE 977
            A N  G GPESE
Sbjct: 1234 AYNAAGEGPESE 1245


>gi|195113137|ref|XP_002001125.1| GI10608 [Drosophila mojavensis]
 gi|193917719|gb|EDW16586.1| GI10608 [Drosophila mojavensis]
          Length = 1424

 Score = 1009 bits (2609), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/855 (56%), Positives = 614/855 (71%), Gaps = 11/855 (1%)

Query: 128  RDYLAYSFSQSLKRWGFERVTGMEPLLFICEA----SIQKLHYLLNDDRTYQYGMDIENP 183
            RD + Y++S+   RW F     +E  LFICE+    S   ++  L+D R Y YG+DI + 
Sbjct: 328  RDRVVYAYSKKRDRWMFMPAYEIELNLFICESKALYSPDNVNIKLDDKRPYTYGLDIRDL 387

Query: 184  DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
            ++IPRGP+F+KQP D  FD++K  ++ND++LSC AGGYP PSYEW++E YV D L    I
Sbjct: 388  ERIPRGPFFVKQPNDTTFDVNKNRLINDVSLSCLAGGYPTPSYEWYREVYVNDTLEYKRI 447

Query: 244  DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
            DPL + R+T+SGGNLII DP+Q  D+G+YHC A NKFGS+ SES  L FGFI EFNLKR+
Sbjct: 448  DPLVEDRYTISGGNLIIYDPKQALDQGAYHCVARNKFGSVRSESAHLNFGFIMEFNLKRS 507

Query: 304  PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
             E    NWGKA+FCDPP +YP + YYWARDYFPNFVEED+RVFVS+DGALYFS +E +D 
Sbjct: 508  AESSEMNWGKAIFCDPPQHYPAIRYYWARDYFPNFVEEDQRVFVSHDGALYFSFIETVDR 567

Query: 364  GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
             NYSC VQ+ VSDTGRNGPFFPL+V P+SN+Q L F N FPK FPEAP AG+++RLEC+A
Sbjct: 568  ANYSCTVQTLVSDTGRNGPFFPLRVTPNSNYQTLIFANTFPKVFPEAPIAGEEIRLECMA 627

Query: 424  FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
            FGYP+PSYNWTR+G PL RNAY  ++ R+L I N    D G+Y C  +N R  LE S+ I
Sbjct: 628  FGYPIPSYNWTRQGQPLQRNAYTTSYGRVLIIKNATTNDNGQYTCSITNPRKTLEKSIYI 687

Query: 484  SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            +IQ  P FTIPL D   D  +D+T+ CEAF +PD  Y+W++N E L+  T+   ++DRY 
Sbjct: 688  NIQMRPEFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNAERLDPLTI---NRDRYI 744

Query: 544  IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
            IQDNVLTI++L  E+D  MYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA   
Sbjct: 745  IQDNVLTIKFLEKEKDEGMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYN 804

Query: 604  GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
            GN TI CNPEAAP+PKF WKKDG ++GSGG R+I  +G L+ISP SRDD G+Y+C A+N 
Sbjct: 805  GNTTIVCNPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCIASNQ 864

Query: 664  HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
             G DES  R+IVL    + +  P +I    H  + L C A  +ELLD+AY+W  NG  + 
Sbjct: 865  AGTDESHARVIVLQEIRFVQTPPQRIVSREHDLIYLHCEAAFDELLDIAYVWKRNGEILR 924

Query: 724  NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
            N   +   T  I +D   L + N +  D+G+YECVV+S V +ISTKT VI+EG PG PGG
Sbjct: 925  N---DHDGTQRIIVDWNRLTVHNTTMRDSGDYECVVQSAVNEISTKTNVIIEGAPGAPGG 981

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            VQV+E+ KT A I+W DG  NGRPI +Y I+ RTNWN TW NVS HV  +EVDRYT R++
Sbjct: 982  VQVIEIGKTKAIIEWVDGVNNGRPIRYYNILGRTNWNRTWVNVSMHVQAREVDRYTSRQQ 1041

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            A + N L PWS+YEF V A N+LG G PS+PSP Y+T  D PY AP  +GGGGGKIGDL+
Sbjct: 1042 AEVTN-LTPWSSYEFSVAAVNDLGIGTPSAPSPIYSTYDDVPYIAPRNVGGGGGKIGDLT 1100

Query: 904  ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
            I+W+PL  ++Q++  I+YK+FW+ K   E+ S+  K   N G+AVV IP   YYTEYEVK
Sbjct: 1101 ITWDPLLPQEQHSHGIHYKVFWKLKGALEWASDIRKNQENTGVAVVNIPLNNYYTEYEVK 1160

Query: 964  VQAINDVGPGPESEV 978
            VQAIN +G GPESE 
Sbjct: 1161 VQAINSIGKGPESET 1175



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 60/90 (66%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+HW+ +R +CYRF++SP +   +AK  CK+  +DL NV++ ++H FI+ QL  Q+ ++
Sbjct: 168 CPEHWISFRQTCYRFIRSPKRNWAEAKKICKAYTADLVNVDNVEKHAFILKQLIIQNQRQ 227

Query: 89  RKWYFGGTQQSPNLWVNEDGTNLNELDAAF 118
            +++    Q  P  WVN+D T L +++ +F
Sbjct: 228 NRFFISARQTGPQNWVNDDNTQLIQIEDSF 257



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 7/128 (5%)

Query: 853  WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
            ++ YE KV A N +G G P S +    +  D P  AP +           ++SW P+   
Sbjct: 1154 YTEYEVKVQAINSIGKG-PESETVVIYSAEDMPQVAPQKPFALAYNSTCFNVSWSPIDMS 1212

Query: 913  KQNAPN--IYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
            ++N     I +++ +W+ ++  E     L         +V +  + YY    VKV A N 
Sbjct: 1213 RENIRGKLIGHRLKYWKTEHQEEDAVYYLSRTTRPWALIVGLQPDTYYF---VKVMAYNA 1269

Query: 970  VGPGPESE 977
             G GPESE
Sbjct: 1270 AGEGPESE 1277


>gi|195061304|ref|XP_001995968.1| GH14075 [Drosophila grimshawi]
 gi|193891760|gb|EDV90626.1| GH14075 [Drosophila grimshawi]
          Length = 1426

 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/855 (56%), Positives = 615/855 (71%), Gaps = 11/855 (1%)

Query: 128  RDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI----QKLHYLLNDDRTYQYGMDIENP 183
            RD + Y++S+   RW F     +E  LFICE+        ++  L+D R Y YG+DI + 
Sbjct: 326  RDRVVYAYSKKRDRWMFMPAYEIELNLFICESKALYNPDNVNIKLDDKRPYTYGLDIRDL 385

Query: 184  DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
            ++IPRGPYF+KQP D  +D++K  ++ND++LSC AGGYP P+YEW++E Y+ D L    I
Sbjct: 386  ERIPRGPYFVKQPNDTTYDVNKNRLINDVSLSCLAGGYPTPTYEWYREVYLNDTLEYIKI 445

Query: 244  DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
            +PL   R+T+SGGNLII +P+Q  D+G+YHC A NK+G + SES  L FGFI EFNLKR+
Sbjct: 446  EPLIVDRYTISGGNLIIYEPKQALDQGAYHCVAENKYGRVRSESAHLNFGFIMEFNLKRS 505

Query: 304  PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
             E    NWGK++FCDPP +YP + YYWARDYFPNFVEED+RVFVS+DGALYFS +E +D 
Sbjct: 506  AETSEMNWGKSIFCDPPQHYPAIKYYWARDYFPNFVEEDQRVFVSHDGALYFSFIETVDR 565

Query: 364  GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
             NYSC VQ+ VSDTGRNGPFFPL+V P+SN+Q L F N FPK FPEA  AGD++RLEC+A
Sbjct: 566  ANYSCTVQTLVSDTGRNGPFFPLRVTPNSNYQSLIFANTFPKVFPEAAVAGDEIRLECMA 625

Query: 424  FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
            FGYP+PSYNWTR+G PL RNAY  ++ R+L I N    D G+Y C  +N R  LE S+ I
Sbjct: 626  FGYPIPSYNWTRQGQPLQRNAYTTSYGRVLIIKNATTNDNGQYTCSITNPRKTLEKSIYI 685

Query: 484  SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            +IQ  P FTIPL D   D  +D+T+ CEAF +PD  Y+W++N E L+  T+   ++DRY 
Sbjct: 686  NIQMRPEFTIPLKDMIKDYNSDVTFICEAFSIPDANYTWYKNAERLDPLTI---NRDRYV 742

Query: 544  IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
            IQDNVLTI++L  E+D  MYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA   
Sbjct: 743  IQDNVLTIKFLEREKDEGMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYN 802

Query: 604  GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
            GN TI CNPEAAP+PKF WKKDG ++GSGG R+I  +G L+ISP SRDD G+YSC A+N 
Sbjct: 803  GNTTIVCNPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYSCIASNQ 862

Query: 664  HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
             G DES  R+IVL    + +  P +I    H  + L C A  +ELLD+AY+W HNG  + 
Sbjct: 863  AGQDESHARVIVLQEIRFVQTPPQRIVSREHDLIYLHCEAAYDELLDIAYVWKHNGEILR 922

Query: 724  NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
            N   +   T  I +D   L + N +  DAG+YECVV+S V +I+TKT V++EG PG PGG
Sbjct: 923  N---DHDGTQRIIVDWNSLTVHNTTMRDAGDYECVVQSAVNEITTKTNVVIEGAPGAPGG 979

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            VQV+E+ KT A I+W DG  NGR I +Y I+ RTNWN TW NVS HV  +EVDRYT R++
Sbjct: 980  VQVIEIGKTKAIIEWVDGVNNGRQIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQ 1039

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            A + N L PWS+YEF V A N+LG G PS+PSP Y+T  DKPY AP ++GGGGGKIGDL+
Sbjct: 1040 AEVTN-LTPWSSYEFSVTAVNDLGIGTPSTPSPIYSTYDDKPYIAPRKVGGGGGKIGDLT 1098

Query: 904  ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
            I+WEPL  ++Q++  I+YK+FW+ K   E+ ++ +K+  NVG+AVV IP   YYTEYEVK
Sbjct: 1099 ITWEPLLPQEQHSHGIHYKVFWKLKGALEWATDVIKKQENVGVAVVNIPLNNYYTEYEVK 1158

Query: 964  VQAINDVGPGPESEV 978
            VQAIN +G GPESE 
Sbjct: 1159 VQAINSIGKGPESET 1173



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 59/90 (65%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+HW+ YR +CYRF++SP +   +AK  CK+  SDL NV++ D+H FI+  L  Q+ ++
Sbjct: 163 CPEHWISYRQTCYRFIRSPKRNWAEAKKICKAYTSDLINVDNVDKHAFILTNLILQNQRQ 222

Query: 89  RKWYFGGTQQSPNLWVNEDGTNLNELDAAF 118
            +++    Q  P  WVN+D T L +++ +F
Sbjct: 223 NRFFISARQTGPQNWVNDDSTQLVQIEDSF 252



 Score = 43.5 bits (101), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)

Query: 853  WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
            ++ YE KV A N +G G P S +   ++  D P  AP R           ++SW P+   
Sbjct: 1152 YTEYEVKVQAINSIGKG-PESETIVIHSAEDMPQVAPQRPFALAYNSTCFNVSWSPIDMS 1210

Query: 913  KQNAPN--IYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
            ++N     I +++ +W+ ++  E     L         +V +  + YY    VKV A N 
Sbjct: 1211 RENIRGKLIGHRLKYWKTEHQEEDSVYYLSRTTRPWALIVGLQPDTYYF---VKVMAYNA 1267

Query: 970  VGPGPESE 977
             G GPESE
Sbjct: 1268 AGEGPESE 1275


>gi|195390941|ref|XP_002054125.1| GJ22962 [Drosophila virilis]
 gi|194152211|gb|EDW67645.1| GJ22962 [Drosophila virilis]
          Length = 1421

 Score = 1003 bits (2592), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/855 (56%), Positives = 616/855 (72%), Gaps = 11/855 (1%)

Query: 128  RDYLAYSFSQSLKRWGFERVTGMEPLLFICEA----SIQKLHYLLNDDRTYQYGMDIENP 183
            RD + Y++S+   RW F     +E  LFICE+    S   ++  L+D R Y YG+DI + 
Sbjct: 325  RDRVVYAYSKKRDRWMFMPAYEIEMNLFICESKALYSPDNVNIKLDDKRPYTYGLDIRDL 384

Query: 184  DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
            ++IPRGP+F+KQP D  FD++K  ++ND++L C AGGYP P+YEWF+E YV D L  + I
Sbjct: 385  ERIPRGPFFVKQPNDTTFDVNKNRLINDVSLGCLAGGYPTPTYEWFREVYVNDTLEYHRI 444

Query: 244  DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
            DPL D R+T+SGGNLII +P+Q  D+G+YHC A NKFG I SES  L FGFI EFNLKR+
Sbjct: 445  DPLVDNRYTISGGNLIIYEPKQALDQGAYHCIAQNKFGRIRSESAHLNFGFIMEFNLKRS 504

Query: 304  PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
             E    NWGK++FCDPP +YP + YYW+RDYFPNFVEED+RVFVSYDGALYFS +E +D 
Sbjct: 505  AESSEMNWGKSIFCDPPQHYPAIKYYWSRDYFPNFVEEDQRVFVSYDGALYFSFIEIVDR 564

Query: 364  GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
             NYSC VQ+ VSDTGRNGPFFPL+V P+SN+Q L F N FPK FPEAP AG+++RLEC+A
Sbjct: 565  ANYSCTVQTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGEEIRLECMA 624

Query: 424  FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
            FGYP+P+YNWTR G PL RNAY  ++ R+L I N    D G+Y C  +N R  LE S+ I
Sbjct: 625  FGYPIPAYNWTRNGQPLQRNAYTTSYGRVLIIRNATTNDNGQYTCSITNPRKTLEKSIYI 684

Query: 484  SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            +IQ  P FTIPL D   D  +D+T+ CEAF +PD  Y+W++NGE L+  ++   ++DRY 
Sbjct: 685  NIQMRPEFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNGERLDPLSI---NRDRYV 741

Query: 544  IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
            IQDN+LTI++L  ++D  MYQC A+NQLKT YSSAQLRVL++KPSFKKRPLESE YA   
Sbjct: 742  IQDNLLTIKFLEKDKDEGMYQCGAQNQLKTSYSSAQLRVLSMKPSFKKRPLESEIYAVYN 801

Query: 604  GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
            GN TI C+PEAAP+PKF WKKDG ++GSGG R+I  +G L+ISP SRDD G+Y+C A+N 
Sbjct: 802  GNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCVASNQ 861

Query: 664  HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
             G DES  R+IVL    + ++ P +I    H  + L C A  +ELLD+AY+W HNG  + 
Sbjct: 862  AGSDESHARVIVLQEIRFVQRPPQRIVSREHDLIYLHCEAAYDELLDIAYVWKHNGEVLR 921

Query: 724  NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
            N   N   T  I +D   L + N +  D+G+YECVVKS V +IST T VI+EG PG PGG
Sbjct: 922  N---NHDGTERIIVDWNSLTVHNTTMRDSGDYECVVKSAVNEISTTTNVIIEGAPGAPGG 978

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            VQV+E+ KT A I+W DG  NGRPI +Y I+ RTNWN TW NVS     +EVDRYT R++
Sbjct: 979  VQVIEIGKTKAIIEWVDGVNNGRPIRYYHILGRTNWNRTWTNVSMFQHAREVDRYTSRQQ 1038

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
              + + L PWS+YEF V A N+LG G PS+PSP Y+T  DKPY AP  +GGGGGKIGDL+
Sbjct: 1039 TEVGD-LTPWSSYEFSVTAVNDLGIGAPSAPSPIYSTYDDKPYIAPRNVGGGGGKIGDLT 1097

Query: 904  ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
            I+W+PL  ++Q++  I+YK+FW+ K   ++ S+ +K+  NVG+AVV IP   YYTEYEV+
Sbjct: 1098 ITWDPLLPQEQHSHGIHYKVFWKLKGALDWASDIIKKQENVGVAVVNIPLNNYYTEYEVR 1157

Query: 964  VQAINDVGPGPESEV 978
            VQAIN VGPGP S+ 
Sbjct: 1158 VQAINSVGPGPISDT 1172



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+HWV +R +CYRF++SP +   +AK  CK+  +DL NV++ ++H FI+ QL  Q+ ++
Sbjct: 165 CPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAYTADLLNVDNVEKHSFILKQLILQNQRQ 224

Query: 89  RKWYFGGTQQSPNLWVNEDGTNLNELDAAF 118
            +++    Q  P  WVN+D T L +++ +F
Sbjct: 225 NRFFISARQTGPQNWVNDDNTQLVQIEDSF 254


>gi|194898472|ref|XP_001978813.1| GG12351 [Drosophila erecta]
 gi|190650516|gb|EDV47771.1| GG12351 [Drosophila erecta]
          Length = 1408

 Score = 1001 bits (2587), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/829 (58%), Positives = 603/829 (72%), Gaps = 11/829 (1%)

Query: 154  LFICEASI----QKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSIL 209
            LFICE+ +      ++  L+D R Y YG+DI + ++IPRGPYF+KQP D  FD++K  ++
Sbjct: 339  LFICESKVLYSPDNVNIKLDDKRPYHYGLDINDMERIPRGPYFVKQPNDTTFDVNKNRLI 398

Query: 210  NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
            ND+TLSC A GYP PSY W++E YV DRL    IDPL+  R+T+SGGNLII +P+Q  D+
Sbjct: 399  NDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQ 458

Query: 270  GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYY 329
            G+YHC A NKFG I SES  L FGFI EFNLKR+ E    NWGK++FCDPP +YP V YY
Sbjct: 459  GAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGKSIFCDPPQHYPDVRYY 518

Query: 330  WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
            WARDYFPNFVEED+RVFVS DGALYFS +E +D  NYSC VQ+ VSDTGRNGPFFPL+V 
Sbjct: 519  WARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPLRVT 578

Query: 390  PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF 449
            P+SN+Q L F N FPK FPEAP AGD++RLEC+AFGYP+PSYNWTR+G PL RNAY  N+
Sbjct: 579  PNSNYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPIPSYNWTRQGLPLQRNAYTINY 638

Query: 450  NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWT 509
             R+L I N    D GEY C  +N R  L  S+ I+IQ  P FTIPL D   D  +D+T+ 
Sbjct: 639  GRVLIIQNATTNDNGEYSCTITNPRKTLIKSIYINIQMRPQFTIPLKDMIKDYNSDVTFI 698

Query: 510  CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
            CEAF +PD  Y+W++N E L+  T+   ++DRY IQDNVLTI+++  ++D AMYQC A+N
Sbjct: 699  CEAFAIPDANYTWYKNAERLDPTTI---NRDRYIIQDNVLTIKFIEKDKDDAMYQCGAQN 755

Query: 570  QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 629
            QLKT +SSAQLRVL++KPSFKK PLESE YA   GN TI CNPEAAP+PKF WKKDG +I
Sbjct: 756  QLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCNPEAAPRPKFQWKKDGQVI 815

Query: 630  GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
            GSGG R+I  +G L+I+P SRDD GIY+C A+N  G DES  R+IVL    + E  P +I
Sbjct: 816  GSGGHRRILPSGTLIIAPTSRDDEGIYTCIASNQAGTDESHSRVIVLQEIRFIETPPQRI 875

Query: 690  TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749
                H  + L C A  +ELLD+AY+W HNG  + N   N   T  I +D   L + N + 
Sbjct: 876  VSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWTRLTVHNTTM 932

Query: 750  ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 809
             DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W DG+ NGR I 
Sbjct: 933  RDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSNNGRVIR 992

Query: 810  HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            +Y I+ RTNWN TW NVS HV  +EVDRYT R++A + N L PWS YEF V A N+LG G
Sbjct: 993  YYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSVTAVNDLGIG 1051

Query: 870  EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
             PS+PSP Y+T  DKPY AP  +GGGGGKIGDL+I+W+PL  ++Q++  I+YK+FW+ K 
Sbjct: 1052 TPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKG 1111

Query: 930  DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              E+ S+ +K+  ++G+AVV IP   YYTEYEVKVQAIN VG GPESE+
Sbjct: 1112 AIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEI 1160



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 60/90 (66%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+HWV +R +CYRF++SP +   ++K  CK+ ++DL NV++ ++H FI+  L  Q+ ++
Sbjct: 139 CPEHWVSFRQTCYRFIRSPKRNWAESKKICKAYNADLINVDNVEKHSFILKNLILQNQRQ 198

Query: 89  RKWYFGGTQQSPNLWVNEDGTNLNELDAAF 118
            +++    Q  P  WVN+D T L ++D +F
Sbjct: 199 NRFFISARQTGPLNWVNDDNTQLVQIDDSF 228



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 853  WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
            ++ YE KV A N +G G P S     ++  D P  AP +           +++W+P+   
Sbjct: 1139 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1197

Query: 913  KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
            ++N           Y+K   ++++   + S T +   N  + V   P  +Y+    VKV 
Sbjct: 1198 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1250

Query: 966  AINDVGPGPESE 977
            A N  G GPESE
Sbjct: 1251 AYNAAGEGPESE 1262


>gi|195451021|ref|XP_002072734.1| GK13528 [Drosophila willistoni]
 gi|194168819|gb|EDW83720.1| GK13528 [Drosophila willistoni]
          Length = 1425

 Score =  996 bits (2575), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/855 (55%), Positives = 614/855 (71%), Gaps = 11/855 (1%)

Query: 128  RDYLAYSFSQSLKRWGFERVTGMEPLLFICEA----SIQKLHYLLNDDRTYQYGMDIENP 183
            RD + Y+FS+   +W F     +E  LFICE+    +   ++  L+D R Y YG+DI + 
Sbjct: 328  RDRVVYAFSKKRDKWVFMPAYEIELNLFICESRSLYTPDNVNIKLDDKRPYHYGLDIRDL 387

Query: 184  DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
            ++IPRGPYF+KQP D  FD++K  ++ND++LSC AGG+P P+Y+W++E YV D L    I
Sbjct: 388  ERIPRGPYFVKQPNDTTFDVNKNRLINDVSLSCLAGGFPTPTYQWYREVYVNDTLEYRRI 447

Query: 244  DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
            DPL   R+T+SGGNLII +P+Q  D+G+YHC A NKFG + SES  L FGFI EFNLKR+
Sbjct: 448  DPLVQDRYTISGGNLIIYEPKQALDQGAYHCVAENKFGRVRSESAHLNFGFIMEFNLKRS 507

Query: 304  PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
             E    NWGK++FCDPP +YP V YYWARDYFPNFVEED+RVFVS+DGALYFS +E +D 
Sbjct: 508  SETSEMNWGKSIFCDPPQHYPAVRYYWARDYFPNFVEEDQRVFVSHDGALYFSFIETVDR 567

Query: 364  GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
             NYSC VQ+ VSDTGRNGPFF L+V P+SN+Q L F N FPK FPEAP AG+ +RLEC+A
Sbjct: 568  ANYSCTVQTLVSDTGRNGPFFSLRVTPNSNYQALIFANTFPKVFPEAPVAGEDIRLECMA 627

Query: 424  FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
            FGYP+PSYNWTR+G  L RNAY  N+ R+L I N    D GEY C  +N R  L  S+ I
Sbjct: 628  FGYPIPSYNWTRQGQNLQRNAYTTNYGRVLIIQNATTNDNGEYTCTITNLRKTLVKSIYI 687

Query: 484  SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            +IQ  P FTIPL D   D  +D+T+ CEAF +PD  Y+W++N E L+  T+   ++DRY 
Sbjct: 688  NIQMRPEFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNAERLDPLTI---NRDRYV 744

Query: 544  IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
            IQDNVLTI++L  ++D  MYQC A+NQLKT +SS+QLRVL++KPSFKK PLE+E YA   
Sbjct: 745  IQDNVLTIKFLEKDKDEGMYQCGAQNQLKTSFSSSQLRVLSMKPSFKKHPLEAEIYAVFN 804

Query: 604  GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
            GN TI C+PEAAP+PKF WKKDG ++GSGG R+I  +G L+ISP SRDD G+Y+C A+N 
Sbjct: 805  GNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCIASNQ 864

Query: 664  HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
             G DES  R+IVL    + +  P +I    H  + L C A  +ELLD+AY+W HNG  + 
Sbjct: 865  AGTDESHARVIVLQEIRFLQTPPQRIVSKEHDLIYLHCEAIYDELLDIAYVWKHNGEILK 924

Query: 724  NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
            N   +   T  I +D   L + N + ADAG+YECVV+S V +IS KT V++EG PG PGG
Sbjct: 925  N---DHDGTTRIIVDWNSLTVHNTTMADAGDYECVVQSAVNEISAKTVVVIEGAPGAPGG 981

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            VQV ++ KT A I+W DGA NGRPI +Y I+ RTNWN TW NVS HV  KE+DRYT R++
Sbjct: 982  VQVNQIAKTKAIIEWVDGANNGRPIRYYNILGRTNWNRTWTNVSTHVQAKEIDRYTMRQQ 1041

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            A + N L PWS+YEF V A N+LG G PS+PSP Y+T  DKPY  P  +GGGGGKIGDL+
Sbjct: 1042 AEVMN-LTPWSSYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYVPPRNVGGGGGKIGDLT 1100

Query: 904  ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
            I+W+PL  ++Q++  I+YK+FW+ K   E+ ++ + +  NVG+AVV IP E YYT+Y+VK
Sbjct: 1101 ITWDPLLPQEQHSHGIHYKVFWKLKGAKEWATDIIMKQENVGVAVVNIPRENYYTQYDVK 1160

Query: 964  VQAINDVGPGPESEV 978
            VQAIN+VG GPESE+
Sbjct: 1161 VQAINNVGKGPESEM 1175



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 59/90 (65%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+HWV +R +CYRF++SP +   +AK  CK+ ++DL NV++ ++H FI+  L  Q+ ++
Sbjct: 170 CPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAYNADLINVDNVEKHSFILRNLIVQNQRQ 229

Query: 89  RKWYFGGTQQSPNLWVNEDGTNLNELDAAF 118
            +++    Q  P  WVN+D T L  ++ +F
Sbjct: 230 NRFFISARQTGPQNWVNDDNTQLIHIEDSF 259


>gi|194743634|ref|XP_001954305.1| GF18209 [Drosophila ananassae]
 gi|190627342|gb|EDV42866.1| GF18209 [Drosophila ananassae]
          Length = 1404

 Score =  989 bits (2557), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/855 (54%), Positives = 611/855 (71%), Gaps = 11/855 (1%)

Query: 128  RDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI----QKLHYLLNDDRTYQYGMDIENP 183
            RD + Y++S+   RW F     +E  LFICE+ +      ++  L+D R Y YG++I + 
Sbjct: 310  RDRVVYAYSKKRDRWMFMPAYEIELNLFICESKVLYSPDNVNIKLDDKRPYHYGLEIRDM 369

Query: 184  DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
            ++IPRGPYF+KQP D +FD++K  ++ND+TLSC AGG+P PSY W++E YV D L    I
Sbjct: 370  ERIPRGPYFVKQPNDTIFDVNKNRVINDVTLSCLAGGFPTPSYLWYREVYVNDTLEYQKI 429

Query: 244  DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
            DPL + R+T+SGGNL+I +P+Q  D+G+YHC A NKFG + SES  L FGFI EFNLKR+
Sbjct: 430  DPLKEDRYTISGGNLVIYEPKQALDQGAYHCVAENKFGRVRSESAHLNFGFIMEFNLKRS 489

Query: 304  PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
             E    NWGK++FCDPP +YP V YYW+R+YFPNFV+ED+RVFVS DGALYFS +E +D 
Sbjct: 490  GETSEMNWGKSIFCDPPQHYPDVRYYWSRNYFPNFVDEDQRVFVSRDGALYFSFIETVDR 549

Query: 364  GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
             NYSC VQ+ VSDTGRNGPFFPL+V P+SN+Q L F N FPK FPEAP AGD + LEC+A
Sbjct: 550  ANYSCTVQTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDDIHLECMA 609

Query: 424  FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
            FGYP+PSYNWTR+G  L RN+Y  N+ R+L I N    D GEY C  +N    L  S+ +
Sbjct: 610  FGYPIPSYNWTRQGQHLQRNSYVTNYGRVLVIQNATTNDNGEYTCTITNPHKTLVKSIHL 669

Query: 484  SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            +IQ  P FTIPL D   D  +D+T+ CEAF +PD  Y+W++N E L+  ++   ++DRY 
Sbjct: 670  NIQMRPEFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNAERLDPLSI---NRDRYI 726

Query: 544  IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
            IQDNVLTI++L  ++D  MYQC A+NQLKT +SSAQLRVL++KPSFKK PLE+E YA   
Sbjct: 727  IQDNVLTIKFLEKDKDEGMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLEAEVYAVYN 786

Query: 604  GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
            GN TI CNPEAAP+PKF WKKDG ++GSGG R+I  +G L I+P SRDD GIY+C ATN 
Sbjct: 787  GNTTIVCNPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLTIAPTSRDDEGIYTCIATNQ 846

Query: 664  HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
             G DES  R+IVL    + +  P +I    H  + L C A  +ELLD+AY+W HNG  + 
Sbjct: 847  AGTDESHARVIVLQEIRFIQTPPQRIVTKEHDLIYLHCEAAFDELLDIAYVWKHNGEVLK 906

Query: 724  NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
            N   +   T  I ++   L + N +  DAG+YECVVKS V +I++KT+V++EG PG PGG
Sbjct: 907  N---DHDGTGRILVEWNSLTVHNTTMRDAGDYECVVKSAVNEINSKTSVVIEGAPGAPGG 963

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            VQV+++ KT A I+W DG+ NGRPI +Y I+ RTNWN TW NVS HV  +EVDRYT R++
Sbjct: 964  VQVIQISKTKAIIEWVDGSNNGRPIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQ 1023

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            A + N L PWS YEF V A N+LG G PS+PSP Y+T  DKPY AP  +GGGGGKIGDL+
Sbjct: 1024 AEVTN-LTPWSAYEFSVTAVNDLGIGIPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLT 1082

Query: 904  ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
            I+W+PL  ++Q++  I+YK+FW+ K   E+ S+ +K+  + G+AVV IP   YYTEYEVK
Sbjct: 1083 ITWDPLLPQEQHSHGIHYKVFWKLKGALEWASDEIKKQDHTGVAVVNIPLNNYYTEYEVK 1142

Query: 964  VQAINDVGPGPESEV 978
            VQAIN +G GPES +
Sbjct: 1143 VQAINSIGKGPESPI 1157



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 67/107 (62%), Gaps = 4/107 (3%)

Query: 12  VSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDA 71
            S+  +FS   DE    CP++WV YR +CYRF++SP +   +AK  CK+ ++DL NV++ 
Sbjct: 140 ASYRDIFS---DEDNF-CPEYWVSYRQTCYRFIRSPKRNWAEAKKICKAYNADLINVDNV 195

Query: 72  DEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAF 118
           ++H FI+  L  Q+ ++ +++    Q  P  WVN+D T L +++ +F
Sbjct: 196 EKHAFILKNLILQNHRQNRFFISARQTGPQNWVNDDNTQLVQIEDSF 242



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 15/132 (11%)

Query: 853  WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
            ++ YE KV A N +G G P SP    ++  D P  AP +           +++W+P+   
Sbjct: 1136 YTEYEVKVQAINSIGKG-PESPIAVIHSAEDMPQVAPQKPIALAFNSTCFNVTWQPIDMS 1194

Query: 913  KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
            ++N           Y+K   ++++   + S T +   N  + V   P  +Y+    VKV 
Sbjct: 1195 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1247

Query: 966  AINDVGPGPESE 977
            A N  G GPESE
Sbjct: 1248 AYNAAGEGPESE 1259


>gi|20152017|gb|AAM11368.1| LD28757p [Drosophila melanogaster]
          Length = 1036

 Score =  978 bits (2528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/795 (58%), Positives = 581/795 (73%), Gaps = 7/795 (0%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           ++IPRGPYF+KQP D  FD++K  ++ND+TLSC A GYP PSY W++E YV DRL    I
Sbjct: 2   ERIPRGPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKI 61

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           DPL+  R+T+SGGNLII +P+Q  D+G+YHC A NKFG I SES  L FGFI EFNLKR+
Sbjct: 62  DPLAQDRYTISGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRS 121

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
            E    NWGK++FCDPP +YP V YYWARDYFPNFVEED+RVFVS DGALYFS +E +D 
Sbjct: 122 AETSEMNWGKSIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDR 181

Query: 364 GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
            NYSC VQ+ VSDTGRNGPFFPL+V P+SN+Q L F N FPK FPEAP AGD++RLEC+A
Sbjct: 182 ANYSCTVQTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDEIRLECMA 241

Query: 424 FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           FGYP+PSYNWTR+G PL RNAY  N+ R+L I N    D GEY C  +N R  L  S+ I
Sbjct: 242 FGYPIPSYNWTRQGLPLQRNAYTINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYI 301

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +IQ  P FTIPL D   D  +D+T+ CEAF +PD  Y+W++N E L+   +   ++DRY 
Sbjct: 302 NIQMRPQFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNAERLDPANI---NRDRYI 358

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           IQDNVLTI++L  ++D AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA   
Sbjct: 359 IQDNVLTIKFLEKDKDDAMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYN 418

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           GN TI C+PEAAP+PKF WKKDG +IGSGG R+I  +G L ISP SRDD GIY+C A+N 
Sbjct: 419 GNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQ 478

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G DES  R+IVL    + E  P +I    H  + L C A  +ELLD+AY+W HNG  + 
Sbjct: 479 AGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLK 538

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           N   N   T  I +D   L + N S  DAG+YECVVKS V +IS+KT+V +EG PG PGG
Sbjct: 539 N---NHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGG 595

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           VQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV  +EVDRYT R++
Sbjct: 596 VQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQ 655

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A + N L PWS YEF V A N+LG G PS+PSP Y+T  DKPY AP  +GGGGGKIGDL+
Sbjct: 656 AEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLT 714

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W+PL  ++Q++  I+YK+FW+ K   E+ S+ +K+  ++G+AVV IP   YYTEYEVK
Sbjct: 715 ITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVK 774

Query: 964 VQAINDVGPGPESEV 978
           VQAIN VG GPESE+
Sbjct: 775 VQAINSVGKGPESEI 789



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 152/709 (21%), Positives = 261/709 (36%), Gaps = 115/709 (16%)

Query: 323 YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382
           YP  +Y W R   P    +     ++Y   L        D G YSC + +          
Sbjct: 244 YPIPSYNWTRQGLP---LQRNAYTINYGRVLIIQNATTNDNGEYSCTITN---------- 290

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-GDKVRLECVAFGYPVPSYNWTRRGSPL- 440
             P K    S +  ++    F     +  K     V   C AF  P  +Y W +    L 
Sbjct: 291 --PRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWYKNAERLD 348

Query: 441 PRNAYFENF---NRILTIPNV-KVEDQGEYICRASND-RSALESSVTISIQAEPNFTI-P 494
           P N   + +   + +LTI  + K +D   Y C A N  +++  S+    +  +P+F   P
Sbjct: 349 PANINRDRYIIQDNVLTIKFLEKDKDDAMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHP 408

Query: 495 L-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
           L ++ +     + T  C+    P   + W ++G+++ S         R  +    LTI  
Sbjct: 409 LESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGS------GGHRRILPSGTLTISP 462

Query: 554 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
            + + D  +Y C A NQ  T  S A++ VL      +  P    +   +     IF + E
Sbjct: 463 TSRD-DEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHD----LIFLHCE 517

Query: 614 AAPKP----KFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
           AA        +VWK +G ++ +   G  R I +   L +   S  D+G Y C   +    
Sbjct: 518 AAFDELLDIAYVWKHNGEVLKNNHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNE 577

Query: 667 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 726
             SK  + +   P      P  + +     +Q+  +    E +D     +HNG  I   +
Sbjct: 578 ISSKTSVSIEGAPG----APGGVQV-----IQISKTKAIIEWVD----GSHNGRAIRYYN 624

Query: 727 LNELETPN---INIDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKT 770
           +      N   +N+   +              E+ N +   A E+     + +G I T +
Sbjct: 625 ILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLG-IGTPS 683

Query: 771 ------TVIVEGPPGLPGGVQVVEVHKTSATIQW-----TDGATNGRPITHYKIIARTNW 819
                 +   + P   P  V          TI W      +  ++G    HYK+  +   
Sbjct: 684 APSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHG---IHYKVFWKLKG 740

Query: 820 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP----WSTYEFKVIAGNELGYGEPSSPS 875
              W +          D    +    +  V +P    ++ YE KV A N +G G P S  
Sbjct: 741 AIEWAS----------DEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKG-PESEI 789

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI-------YYKIFWRKK 928
              ++  D P  AP +           +++W+P+   ++N           Y+K   +++
Sbjct: 790 AVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSRENIRGKLIGHRLKYWKTTHQEE 849

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           +   + S T +   N  + V   P  +Y+    VKV A N  G GPESE
Sbjct: 850 DSVYYLSRTTR---NWALIVGLQPDTYYF----VKVMAYNAAGEGPESE 891


>gi|427788459|gb|JAA59681.1| Putative contactin 5 [Rhipicephalus pulchellus]
          Length = 1216

 Score =  918 bits (2372), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/954 (48%), Positives = 623/954 (65%), Gaps = 12/954 (1%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+ WV Y  SCY+F +SP +TR+ AK  C++ + +L +VN  +EH F++  L   DPQ 
Sbjct: 25  CPRGWVDYGQSCYKFNRSPPRTRDGAKEACQAYNCELISVNTFEEHRFVVDWLREHDPQH 84

Query: 89  RKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERV 147
           R+W+  G +   N+W  E D    + +D  +LP+  D     Y++Y+FS  L RWG ++V
Sbjct: 85  RRWFTSGFESGDNVWTWEGDNAQFSNIDNLWLPQ-QDGYLWKYVSYNFSTELNRWGLQKV 143

Query: 148 TGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
              + L FICE   ++L  +   +R   +G  + N +++PRGPYF+++P +V+FDLS RS
Sbjct: 144 APGDELAFICEIPKERLFQIYIQERPLDFGYILTNREEVPRGPYFVEEPAEVIFDLSGRS 203

Query: 208 ILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267
             NDI+L C A G P P+Y+WFKE+Y  D L+   IDPLS+ RFT + G L I+ P Q  
Sbjct: 204 QTNDISLRCVAEGNPPPTYKWFKEEYANDELLNIYIDPLSNGRFTQTDGTLTIHYPDQTR 263

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN 327
           DRG YHC A NK+G ++S SV L FGFIGEFN  RA + G + WGK++ CDPP   P V+
Sbjct: 264 DRGKYHCMAENKYGKVLSRSVALGFGFIGEFNKNRAGDSGKEFWGKSVSCDPPQFNPAVH 323

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
           Y+W R+ FP+FV+ED RVFVS+DG LYFS+LE+ D  NYSCNVQS++S TGR GP+F L 
Sbjct: 324 YFWVRNAFPDFVQEDPRVFVSHDGNLYFSSLEKNDDANYSCNVQSRISSTGRTGPYFHLL 383

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
           V P S+ Q+L FPNNFPK+FPEAP AG+ VRLEC+A+GYPVP YNWTR G P+P  A   
Sbjct: 384 VEPASSGQKLLFPNNFPKSFPEAPLAGNDVRLECIAYGYPVPKYNWTRVGGPMPAGAQIS 443

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
           +  R+L +P V+VED GEY+C AS D+ ++   VT++IQA P FTIPL  +  D  + LT
Sbjct: 444 SHGRVLLLPRVRVEDLGEYVCIASADQDSIRKGVTLTIQAMPEFTIPLEHQVADEGSRLT 503

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567
           WTCEAFG+P+V Y W+RNGE LN+E+   + + RY + DN+L I  +N   D  MYQC A
Sbjct: 504 WTCEAFGIPEVVYHWYRNGEKLNTESSD-DMRARYKVDDNILVIEDIN-RADEGMYQCSA 561

Query: 568 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 627
            N L T +S+AQLRV+T+ P+F K PL++E YA E GN+TI C PEAAP P+F W+K+G 
Sbjct: 562 TNSLGTSFSTAQLRVVTMAPNFAKYPLDTEMYAAEEGNITIPCRPEAAPYPEFTWRKNGY 621

Query: 628 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 687
               GGR ++  NG L I PV R+D G Y+C   N +G   S G L+VL  P   E  PP
Sbjct: 622 TFALGGRTQMLSNGYLRIDPVRREDEGNYTCVVKNQYGTASSTGALVVLSLPRSVEAPPP 681

Query: 688 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 747
           K+        +L C A    +LD++YIW HN +RI     +E     +    G L I N 
Sbjct: 682 KVVATVGSLEELHCHALAPHMLDLSYIWLHNDLRI---HPHEWPQYGVGYRPGYLVIYNV 738

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 807
           SFA+AG Y C+ K++VGK+   T ++V GPPG PG V     + TS  I+W DG ++G  
Sbjct: 739 SFAEAGHYTCIAKTSVGKVFANTELLVLGPPGQPGAVLGHSFNATSGFIEWADGTSHGSH 798

Query: 808 ITHYKIIARTNWNSTW---FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           IT Y I  RTN N+TW    NV+     K+    +GR+E  + NVL PWS YEF+V A N
Sbjct: 799 ITSYAIEGRTNHNATWRELLNVTYAPPSKQ-HHASGRREVELGNVLSPWSKYEFRVTAAN 857

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            LG G+PS PSPQYNT  D+PY AP  +GGGGGK G L+I+W PL  E+ N+P ++Y+++
Sbjct: 858 ILGVGQPSDPSPQYNTAVDRPYIAPRNVGGGGGKAGSLTITWTPLSPEEWNSPEVWYRVY 917

Query: 925 WRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           +R   D +E + + L++ GNVG+ VV +  E Y++ YEV+VQA+N VG GP SE
Sbjct: 918 YRPSGDRSEPRKKDLRKLGNVGLYVVPVGEENYFSPYEVQVQAVNVVGEGPISE 971



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 177/712 (24%), Positives = 268/712 (37%), Gaps = 115/712 (16%)

Query: 323  YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382
            YP   Y W R   P           S+   L    +   D G Y C + S   D+ R G 
Sbjct: 422  YPVPKYNWTRVGGPMPAGAQ---ISSHGRVLLLPRVRVEDLGEYVC-IASADQDSIRKGV 477

Query: 383  FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL-- 440
               ++  P     +   P        +    G ++   C AFG P   Y+W R G  L  
Sbjct: 478  TLTIQAMP-----EFTIPLEH-----QVADEGSRLTWTCEAFGIPEVVYHWYRNGEKLNT 527

Query: 441  ----PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI-QAEPNFT-IP 494
                   A ++  + IL I ++   D+G Y C A+N      S+  + +    PNF   P
Sbjct: 528  ESSDDMRARYKVDDNILVIEDINRADEGMYQCSATNSLGTSFSTAQLRVVTMAPNFAKYP 587

Query: 495  L-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
            L T+ +   + ++T  C     P   ++W +NG      T  L  + +  + +  L I  
Sbjct: 588  LDTEMYAAEEGNITIPCRPEAAPYPEFTWRKNGY-----TFALGGRTQ-MLSNGYLRIDP 641

Query: 554  LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
            +  E D   Y C  KNQ  T  S+  L VL+L  S +  P   +  A  G    + C+  
Sbjct: 642  VRRE-DEGNYTCVVKNQYGTASSTGALVVLSLPRSVEAPP--PKVVATVGSLEELHCH-A 697

Query: 614  AAPKP---KFVWKKDGNII--------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
             AP      ++W  +   I        G G     +  G L+I  VS  ++G Y+C A  
Sbjct: 698  LAPHMLDLSYIWLHNDLRIHPHEWPQYGVG-----YRPGYLVIYNVSFAEAGHYTCIAKT 752

Query: 663  VHGMDESKGRLIVLHGP--------------SYYEQLPPKITIAAHRN---LQLRCS--A 703
              G   +   L+VL  P              S + +     +  +H     ++ R +  A
Sbjct: 753  SVGKVFANTELLVLGPPGQPGAVLGHSFNATSGFIEWADGTSHGSHITSYAIEGRTNHNA 812

Query: 704  HTEELLDVAYI---WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
               ELL+V Y      H+      ++L  + +P    +     +T A+    G+      
Sbjct: 813  TWRELLNVTYAPPSKQHHASGRREVELGNVLSPWSKYE---FRVTAANILGVGQ------ 863

Query: 761  STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
                  S +    V+ P   P  V        S TI WT              ++   WN
Sbjct: 864  --PSDPSPQYNTAVDRPYIAPRNVGGGGGKAGSLTITWTP-------------LSPEEWN 908

Query: 821  S--TWFNVSEHVIG--KEVDRYTGRKEASIENVLVP------WSTYEFKVIAGNELGYGE 870
            S   W+ V     G   E  +   RK  ++   +VP      +S YE +V A N +G G 
Sbjct: 909  SPEVWYRVYYRPSGDRSEPRKKDLRKLGNVGLYVVPVGEENYFSPYEVQVQAVNVVGEGP 968

Query: 871  PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRK 927
             S P   Y+     P   PS +         L+++W PL   REK     I ++I +WR 
Sbjct: 969  ISEPEIVYSAEG-MPQVQPSGVYAVPHNSTALNVTWNPLDITREKIRGRLIGHRIKYWRS 1027

Query: 928  KNDTEFQSETLKEYG--NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              D E  S  L + G  N G+ V   P+    TEY V V A N+ G GPESE
Sbjct: 1028 DLDRELDSLILLKRGIENWGLIVGLQPN----TEYRVAVMAYNEAGSGPESE 1075


>gi|170066102|ref|XP_001868120.1| contactin [Culex quinquefasciatus]
 gi|167862726|gb|EDS26109.1| contactin [Culex quinquefasciatus]
          Length = 977

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/765 (56%), Positives = 554/765 (72%), Gaps = 2/765 (0%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYH 273
           LSC AGGYP P+Y W++E Y  D +    +DPL + R+T SGG+LII+DP+Q++D+G+YH
Sbjct: 2   LSCLAGGYPIPTYSWYRELYTNDNVTVVKLDPLKNSRYTTSGGSLIIHDPQQIQDQGTYH 61

Query: 274 CKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD 333
           C A NK+G IISESV+L FG+I EFNL+R+ E G  NWGK+++CDPP +YP V YYW+R 
Sbjct: 62  CIAENKYGKIISESVELNFGYILEFNLQRSSENGEMNWGKSLYCDPPQHYPDVRYYWSRT 121

Query: 334 YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393
           YFPNFVEED+RVFVS+DG+LYFS+LE  D  NYSCNVQS VSDTGRNGPFF L+V  H +
Sbjct: 122 YFPNFVEEDQRVFVSHDGSLYFSSLEIKDRANYSCNVQSTVSDTGRNGPFFNLQVVSHPH 181

Query: 394 FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRIL 453
           +Q L F N FPK +PEAP AG  VRLEC+AFGYPVPSYNWTR+   LPR +Y E++NR+L
Sbjct: 182 YQDLIFANTFPKIYPEAPVAGKDVRLECMAFGYPVPSYNWTRKSGNLPRQSYLESYNRVL 241

Query: 454 TIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF 513
            I N    D GEY C   NDR  L  S+ ++IQ EPNFTIPL DK  D Q+ +T+ CEA 
Sbjct: 242 VIRNSTANDNGEYTCTIKNDRKFLSKSILVNIQMEPNFTIPLKDKLKDFQSSVTFLCEAT 301

Query: 514 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573
            +PDV Y+W++N +L++ E+    ++D+Y IQDN+L I +L+PE D  MYQC+A NQLK 
Sbjct: 302 AIPDVNYTWYKNAQLMDPESSKF-NKDKYIIQDNILKINFLDPEEDNGMYQCKASNQLKG 360

Query: 574 RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG 633
            YSSAQLRVL++KPSFKK+PLESE Y+   GN TI C PEAAP+PK VWKKDGN+IGSGG
Sbjct: 361 VYSSAQLRVLSMKPSFKKKPLESEIYSIYNGNTTIECEPEAAPRPKIVWKKDGNVIGSGG 420

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
            RKI   G L ISP SRDD G+Y+C A+N  G+ ESK RLIVL    + EQLPPK+    
Sbjct: 421 HRKILPVGTLYISPTSRDDEGVYTCVASNTQGVAESKARLIVLQELRFIEQLPPKLIKQI 480

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
              L LRC    +E+LDVA++W HNG  I + D          ++   LE+ N +  D+G
Sbjct: 481 DEMLYLRCDVSYDEVLDVAFLWAHNGRLINSDDDVFRNNSRFFVNNNHLEVHNLTLLDSG 540

Query: 754 EYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI 813
           EYEC+VKS V ++ +KT V V+GPPG PG ++V+++ KT A ++W DG+ NGR I  Y I
Sbjct: 541 EYECIVKSAVNQVVSKTNVFVQGPPGAPGAIKVIDIKKTDAVLEWIDGSDNGRQIMFYNI 600

Query: 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
           + RT WN TW N+SE+V+ +E+DRY GRK A + N L P   YEF V+A N+LG G PS 
Sbjct: 601 LGRTTWNKTWVNISENVVAQEIDRYNGRKRAVVNN-LTPGCGYEFSVMAVNDLGGGTPSL 659

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
           PSP YNT  DKPY  P  IGGGGGKIGDL+I+W PL  E+QN+ +I+YK+F+R     EF
Sbjct: 660 PSPLYNTQKDKPYLFPKNIGGGGGKIGDLTITWTPLLPEEQNSIDIHYKVFYRLLGQKEF 719

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            ++ LK  GN G AVV IPS+ YYT+YEVKVQAIND+G GP S++
Sbjct: 720 ATDVLKNRGNTGKAVVHIPSDKYYTKYEVKVQAINDLGDGPVSDI 764



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/384 (21%), Positives = 146/384 (38%), Gaps = 38/384 (9%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           D+ L C A GYP PSY W ++              L  + +  S   +++       D G
Sbjct: 204 DVRLECMAFGYPVPSYNWTRKS-----------GNLPRQSYLESYNRVLVIRNSTANDNG 252

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYW 330
            Y C   N     +S+S+ +       F +    ++ +        C+  T  P VNY W
Sbjct: 253 EYTCTIKND-RKFLSKSILVNIQMEPNFTIPLKDKLKDFQSSVTFLCE-ATAIPDVNYTW 310

Query: 331 ---ARDYFPNFVEEDKRVFVSYDGALYFSALE-QIDAGNYSCNVQSKVSDTGRNGPFFPL 386
              A+   P   + +K  ++  D  L  + L+ + D G Y C   +++     +     L
Sbjct: 311 YKNAQLMDPESSKFNKDKYIIQDNILKINFLDPEEDNGMYQCKASNQLKGVYSSAQLRVL 370

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            + P  +F++    +     +           +EC     P P   W + G+ +    + 
Sbjct: 371 SMKP--SFKKKPLESEIYSIY------NGNTTIECEPEAAPRPKIVWKKDGNVIGSGGH- 421

Query: 447 ENFNRILTIPNVKV-----EDQGEYICRASNDRSALESSVTISIQAEPNFT---IPLTDK 498
               +IL +  + +     +D+G Y C ASN +   ES   + +  E  F     P   K
Sbjct: 422 ---RKILPVGTLYISPTSRDDEGVYTCVASNTQGVAESKARLIVLQELRFIEQLPPKLIK 478

Query: 499 HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 558
            +D    L        V DV + W  NG L+NS+     +  R+F+ +N L +  L    
Sbjct: 479 QIDEMLYLRCDVSYDEVLDVAFLWAHNGRLINSDDDVFRNNSRFFVNNNHLEVHNLT-LL 537

Query: 559 DPAMYQCRAKNQLKTRYSSAQLRV 582
           D   Y+C  K+ +    S   + V
Sbjct: 538 DSGEYECIVKSAVNQVVSKTNVFV 561



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 159/715 (22%), Positives = 258/715 (36%), Gaps = 122/715 (17%)

Query: 323 YPGVNYYWARDY--FPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN 380
           YP  +Y W R     P      +    SY+  L        D G Y+C +++        
Sbjct: 214 YPVPSYNWTRKSGNLPR-----QSYLESYNRVLVIRNSTANDNGEYTCTIKND------- 261

Query: 381 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD---KVRLECVAFGYPVPSYNWTRRG 437
                 K    S    ++   NF  T P   K  D    V   C A   P  +Y W +  
Sbjct: 262 -----RKFLSKSILVNIQMEPNF--TIPLKDKLKDFQSSVTFLCEATAIPDVNYTWYKNA 314

Query: 438 SPL-PRNAYFENFNRILTIPNVKV------EDQGEYICRASNDRSALESSVTISI-QAEP 489
             + P ++ F     I+    +K+      ED G Y C+ASN    + SS  + +   +P
Sbjct: 315 QLMDPESSKFNKDKYIIQDNILKINFLDPEEDNGMYQCKASNQLKGVYSSAQLRVLSMKP 374

Query: 490 NFTI-PL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS----ETLPLEDQDRYF 543
           +F   PL ++ +     + T  CE    P     W ++G ++ S    + LP+       
Sbjct: 375 SFKKKPLESEIYSIYNGNTTIECEPEAAPRPKIVWKKDGNVIGSGGHRKILPV------- 427

Query: 544 IQDNVLTIRYLNPER--DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
                    Y++P    D  +Y C A N      S A+L VL      ++ P +      
Sbjct: 428 ------GTLYISPTSRDDEGVYTCVASNTQGVAESKARLIVLQELRFIEQLPPKLIKQID 481

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGS------GGRRKIFENGNLLISPVSRDDSGI 655
           E   +    + +      F+W  +G +I S         R    N +L +  ++  DSG 
Sbjct: 482 EMLYLRCDVSYDEVLDVAFLWAHNGRLINSDDDVFRNNSRFFVNNNHLEVHNLTLLDSGE 541

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y C   +      SK  + V        Q PP     A + + ++ +    E +D     
Sbjct: 542 YECIVKSAVNQVVSKTNVFV--------QGPPGAP-GAIKVIDIKKTDAVLEWID----G 588

Query: 716 THNGVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
           + NG +I   ++    T N   +NI   ++      +   G    VV +       + +V
Sbjct: 589 SDNGRQIMFYNILGRTTWNKTWVNISENVVAQEIDRYN--GRKRAVVNNLTPGCGYEFSV 646

Query: 773 IV-----EGPPGLPGGVQVVEVHK---------------TSATIQWTD---GATNGRPIT 809
           +       G P LP  +   +  K                  TI WT       N   I 
Sbjct: 647 MAVNDLGGGTPSLPSPLYNTQKDKPYLFPKNIGGGGGKIGDLTITWTPLLPEEQNSIDI- 705

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP----WSTYEFKVIAGNE 865
           HYK+  R         + +     +V +  G    ++  V +P    ++ YE KV A N+
Sbjct: 706 HYKVFYRL--------LGQKEFATDVLKNRGNTGKAV--VHIPSDKYYTKYEVKVQAIND 755

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP--REKQNAPNIYYKI 923
           LG G  S  +  Y +  D P  AP +          L++SW  +P  RE      I +++
Sbjct: 756 LGDGPVSDIAVIY-SAEDMPQVAPQQTIARSFNSTALNVSWVSVPQTRETIRGKMIGHRL 814

Query: 924 -FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
            +W+K++  E     L    N    +V +  + YY    VK    N  G GPESE
Sbjct: 815 KYWKKEHKEEDAVYYLSRSINSWALIVGLEPDTYYF---VKCMIYNGAGEGPESE 866



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 126/339 (37%), Gaps = 50/339 (14%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILND----ITLSCYAGGYPNPSYEWFK 230
           +Y   I+N  K       +    +  F +  +  L D    +T  C A   P+ +Y W+K
Sbjct: 253 EYTCTIKNDRKFLSKSILVNIQMEPNFTIPLKDKLKDFQSSVTFLCEATAIPDVNYTWYK 312

Query: 231 EDYVQDRLVANLIDPLSDK----RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE 286
                    A L+DP S K    ++ +    L IN     ED G Y CKASN+   + S 
Sbjct: 313 N--------AQLMDPESSKFNKDKYIIQDNILKINFLDPEEDNGMYQCKASNQLKGVYSS 364

Query: 287 SVQLAFGFIGEFNLKRAP---EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343
           +          F  K+ P   EI +   G       P   P     W +D   N +    
Sbjct: 365 AQLRVLSMKPSF--KKKPLESEIYSIYNGNTTIECEPEAAPRPKIVWKKD--GNVIGSGG 420

Query: 344 RVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP 400
              +   G LY S   + D G Y+C   N Q       R      L V      Q+L+F 
Sbjct: 421 HRKILPVGTLYISPTSRDDEGVYTCVASNTQGVAESKAR------LIV-----LQELRFI 469

Query: 401 NNFPKTFPEAPKAGDKVR-LEC-VAFGYPVP-SYNWTRRGSPL-------PRNAYFENFN 450
              P   P+  K  D++  L C V++   +  ++ W   G  +         N+ F   N
Sbjct: 470 EQLP---PKLIKQIDEMLYLRCDVSYDEVLDVAFLWAHNGRLINSDDDVFRNNSRFFVNN 526

Query: 451 RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
             L + N+ + D GEY C   +  + + S   + +Q  P
Sbjct: 527 NHLEVHNLTLLDSGEYECIVKSAVNQVVSKTNVFVQGPP 565


>gi|391347544|ref|XP_003748020.1| PREDICTED: contactin-like [Metaseiulus occidentalis]
          Length = 1223

 Score =  880 bits (2274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/987 (46%), Positives = 630/987 (63%), Gaps = 30/987 (3%)

Query: 8   LFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN 67
           +F+ ++F  +     D     CP+ W++Y +SCY+FV+SP KTR DA+  C +  + L +
Sbjct: 1   MFLILTFLPLLVLGQD-----CPRGWLEYSESCYKFVRSPQKTREDARDLCAAYSARLVS 55

Query: 68  VNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQ 127
           VN  DE  FI+  L   DPQ R+W+  G + +     + DG+  + +D  +LP+  + + 
Sbjct: 56  VNTFDELQFIIRWLRANDPQHRRWWTSGYELNGAWSWDGDGSYFSNIDQLWLPDTGNTIW 115

Query: 128 RDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIP 187
            +Y AYS+S    RWG ER +  + L  ICE   + LH ++  +RT  YG+   +P +IP
Sbjct: 116 -NYAAYSYSSRYHRWGLERASPTDQLALICEIFKENLHQIILQERTIDYGVIELDPLRIP 174

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
            GPYF ++P DV+FD S RS ++ ++L C A GYP P+Y+W++E +  D ++A  IDPL 
Sbjct: 175 HGPYFSREPKDVIFDQSGRSQVDHVSLRCVASGYPTPTYKWYREVFRGDDVIAREIDPLE 234

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
             RFT + G LII+ P    DRG YHC A N FG + S +  L FG+IGEFN KRAP+ G
Sbjct: 235 ADRFTQTDGTLIISHPEPNIDRGKYHCIAENVFGRVKSRTATLGFGYIGEFNKKRAPDTG 294

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
            + WGK++ CD P +YP VNYYW R+ FPNFVEED+RVFVS+D  LYFS+LE+ID GNYS
Sbjct: 295 REYWGKSIACDEPQHYPKVNYYWTRNSFPNFVEEDRRVFVSHDAHLYFSSLEKIDNGNYS 354

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP 427
           CNVQS +SDTGR GPFFP+ V P S+ Q+L FPNNFPK+FP+   AGD+VRLEC+A+GYP
Sbjct: 355 CNVQSDISDTGRTGPFFPVIVEPGSSGQKLLFPNNFPKSFPQTILAGDRVRLECIAYGYP 414

Query: 428 VPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           VP YNWTR    LP  +Y E+  R+L IP V+VED+GEY+C A  ++ +++ S  +S+QA
Sbjct: 415 VPRYNWTRVNGDLPYGSYVESHERVLIIPKVRVEDEGEYVCSAITNQQSIQKSHHLSVQA 474

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
            P FTIPL ++  D  A LTW CEAFG+PD++Y W+ NG  LN +T  L   +RY I +N
Sbjct: 475 LPEFTIPLENQIFDEGATLTWECEAFGIPDISYEWYYNGRPLN-DTSNLHRLNRYIINEN 533

Query: 548 VLTIRYL-----NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
           +L I  +         D  MYQC A+NQ+ + +SSAQL+V++L P+F K PLE+E YA E
Sbjct: 534 ILIINQVARGGEGEGGDEGMYQCMARNQIGSAFSSAQLKVISLMPNFWKYPLETELYAAE 593

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTA 660
            GN+TI C PEAAP P+F+WKKDG  +G+  GGR  I  NG L I+PV  +D G Y+C A
Sbjct: 594 EGNLTISCRPEAAPFPEFLWKKDGYNVGTSGGGRVYIMPNGFLRINPVRIEDEGNYTCIA 653

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
            N++G D S GRLIVL  P  Y+  PP+++   +  + L C A    LLD++Y WTHN +
Sbjct: 654 KNIYGQDMSSGRLIVLPPPIAYQSPPPRLSAVVNDTVTLLCEAKASPLLDLSYTWTHNDL 713

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
           +I        ET     + G L I N +FA+AG Y+C+ K+++G++  +T +IV GPPG 
Sbjct: 714 KIDWRRSPLYETKYSMPEAGNLVIYNVTFAEAGFYKCIAKTSIGRVEMRTELIVIGPPGP 773

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
            G ++    ++TSA + WTD ATNGR    Y I  RTN N TW  ++ +  G   DR+  
Sbjct: 774 VGAIKAENANETSALLSWTDSATNGRHFLGYLIEGRTNHNHTWRLIANYTTG---DRF-- 828

Query: 841 RKEASIENV----------LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
           R EA               L P+S YEF++ A N+LG GE S PSP   T  D+PY AP+
Sbjct: 829 RLEAPFRAARRAYQLPRWSLSPYSGYEFRIAAYNDLGIGEFSEPSPVVTTQEDRPYNAPN 888

Query: 891 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVV 949
            +GGGGGK G L+++WE L  E  NAP ++Y ++WR  ++  EF  + LKEYGNVG+ VV
Sbjct: 889 NVGGGGGKAGSLTVTWEQLHTEDWNAPQVWYIVYWRPASEKGEFNKQNLKEYGNVGLHVV 948

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPES 976
            +  E Y+  Y V VQA+N  G GP S
Sbjct: 949 NVGEENYFRPYTVMVQAMNYKGAGPTS 975



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 158/620 (25%), Positives = 222/620 (35%), Gaps = 85/620 (13%)

Query: 414  GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQ---------- 463
            G  +  EC AFG P  SY W   G PL   +     NR +   N+ + +Q          
Sbjct: 490  GATLTWECEAFGIPDISYEWYYNGRPLNDTSNLHRLNRYIINENILIINQVARGGEGEGG 549

Query: 464  --GEYICRASND-RSALESSVTISIQAEPNF-TIPL-TDKHMDNQADLTWTCEAFGVPDV 518
              G Y C A N   SA  S+    I   PNF   PL T+ +   + +LT +C     P  
Sbjct: 550  DEGMYQCMARNQIGSAFSSAQLKVISLMPNFWKYPLETELYAAEEGNLTISCRPEAAPFP 609

Query: 519  TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMYQCRAKNQLKTRYS 576
             + W ++G  + +         R +I  N      +NP R  D   Y C AKN      S
Sbjct: 610  EFLWKKDGYNVGTS-----GGGRVYIMPNGFL--RINPVRIEDEGNYTCIAKNIYGQDMS 662

Query: 577  SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
            S +L VL    +++  P        +   VT+ C  +A+P     +    N +    RR 
Sbjct: 663  SGRLIVLPPPIAYQSPPPRLSAVVND--TVTLLCEAKASPLLDLSYTWTHNDLKIDWRRS 720

Query: 637  IF--------ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
                      E GNL+I  V+  ++G Y C A    G  E +  LIV+  P     +  +
Sbjct: 721  PLYETKYSMPEAGNLVIYNVTFAEAGFYKCIAKTSIGRVEMRTELIVIGPPGPVGAIKAE 780

Query: 689  ITIAAHRNLQLRCSAHTEE-----LLDVAYIWTHNGVRIGNM---DLNELETPNINIDGG 740
                    L    SA         L++      H    I N    D   LE P       
Sbjct: 781  NANETSALLSWTDSATNGRHFLGYLIEGRTNHNHTWRLIANYTTGDRFRLEAP-FRAARR 839

Query: 741  LLEITNASFADAGEYECVVKS----TVGKISTKTTVIV---EGPPGLPGGVQVVEVHKTS 793
              ++   S +    YE  + +     +G+ S  + V+    + P   P  V        S
Sbjct: 840  AYQLPRWSLSPYSGYEFRIAAYNDLGIGEFSEPSPVVTTQEDRPYNAPNNVGGGGGKAGS 899

Query: 794  ATIQWTDGATN--GRPITHYKIIARTNWNSTWFN---------VSEHVIGKEVDRYTGRK 842
             T+ W    T     P   Y +  R       FN         V  HV+           
Sbjct: 900  LTVTWEQLHTEDWNAPQVWYIVYWRPASEKGEFNKQNLKEYGNVGLHVVN---------- 949

Query: 843  EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
                EN   P   Y   V A N  G G  S     Y+  A +P   P+ +         L
Sbjct: 950  -VGEENYFRP---YTVMVQAMNYKGAGPTSREVEVYSAEA-RPEVQPTGVYAHAYNSTAL 1004

Query: 903  SISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYG--NVGIAVVRIPSEFYY 957
            +++W PL   REK     I ++I +WR   D E     L   G  N  + V   P+    
Sbjct: 1005 NVTWTPLDVTREKIRGRLIGHRIKYWRSNADAEVDFLVLLNRGLRNWALVVGLQPN---- 1060

Query: 958  TEYEVKVQAINDVGPGPESE 977
            TEY V V A ND G GPESE
Sbjct: 1061 TEYRVAVMAYNDAGSGPESE 1080


>gi|241114451|ref|XP_002400195.1| Contactin-5, putative [Ixodes scapularis]
 gi|215493066|gb|EEC02707.1| Contactin-5, putative [Ixodes scapularis]
          Length = 1185

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/945 (46%), Positives = 606/945 (64%), Gaps = 15/945 (1%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+ W  Y  SCY+F +SP +TR+ AK  C++ + +L +VN  +EH F++  L   DPQ 
Sbjct: 1   CPKGWDDYGTSCYKFNRSPTRTRDGAKEACQAYNCELVSVNTFEEHRFVVEWLREHDPQH 60

Query: 89  RKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERV 147
           R+W+  G +   N+W  E D T  + +D+ +LP+  D     Y++Y+FS  L RWG ++V
Sbjct: 61  RRWFTSGFESGENVWTWEGDNTQFSNIDSLWLPQ-QDGYLWKYVSYNFSTELNRWGLQKV 119

Query: 148 TGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
              + L FICE   ++L  +   +R   +G  I N +++PRGPYF ++P +V+FDLS RS
Sbjct: 120 APGDELAFICEIPKERLFQIYIQERPIDFGYIITNREEVPRGPYFTEEPEEVIFDLSGRS 179

Query: 208 ILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267
            +N+I+L C A GYP P Y+WFKE+Y  D+L+   IDPLS+ R+T + G L+I+DP Q +
Sbjct: 180 QMNEISLRCVASGYPPPVYKWFKEEYYDDKLLNIYIDPLSNGRYTQTDGTLVIHDPDQAK 239

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN 327
           DRG YHC A NK+G ++S SV L FG+IGEFN  RA + G + WGK++ CDPP   P V+
Sbjct: 240 DRGKYHCTAENKYGRVLSRSVSLGFGYIGEFNKNRAGDSGKEYWGKSIACDPPQFNPSVH 299

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
           Y+W R+ FP FVEED RVFVS+DG LYFS+LE+ID  NYSCNVQSK+S TGR GP+F + 
Sbjct: 300 YFWVRNSFPEFVEEDNRVFVSHDGNLYFSSLEKIDNANYSCNVQSKISSTGRTGPYFRVT 359

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
           V P S+ Q+L FPNNFPK+FPEAP AG++VRLECVA+GYPVP YNWTRRG P+PR A  E
Sbjct: 360 VDPASSGQKLLFPNNFPKSFPEAPLAGNEVRLECVAYGYPVPKYNWTRRGGPMPRGARIE 419

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI-PLTDKHMDNQADL 506
           +  R+L +P ++VED GEY+C AS  + A+  +VT+S+QA     I P++   + + A +
Sbjct: 420 SRGRVLLLPRIRVEDMGEYVCSASTGQDAIHKAVTLSVQATAKIDISPMSPGTLQSSA-I 478

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
            WT     +   +YSW     LL S  +      +  + +N+  I  L  + D  MYQC 
Sbjct: 479 RWTNMHTRLAYWSYSWPPKNWLLLSLNVTFCHCCQ--VDNNIFIIEELVRKEDEGMYQCC 536

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
           A N L + YSSAQLR++T+ P+F+K PLESETYA E GNVTI C PEAAP P+F W++DG
Sbjct: 537 ATNTLGSTYSSAQLRIVTMAPNFEKYPLESETYAAEEGNVTIACRPEAAPFPEFTWRRDG 596

Query: 627 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
             + +GGR ++  NG L I PV R+D G Y+CTA N +G   S GRLIVL  P   E  P
Sbjct: 597 YAVPTGGRLQVLNNGFLRIHPVRREDEGNYTCTAKNQYGTATSGGRLIVLPPPRSLEAPP 656

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE--------LETPNINID 738
           P++        +L C A    +LD++YIW HN +R+   D  +        + T  + + 
Sbjct: 657 PRLQAHVGGTEELMCQAIAPHMLDLSYIWLHNDLRLHPQDWPQYGVVSFFWIRTNLLALG 716

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
            G L I N +FA+AG Y C+ K++VGK+   T ++V GPPG PG V     + TS  I+W
Sbjct: 717 PGYLVIYNVTFAEAGRYTCIAKTSVGKVLANTELLVIGPPGPPGAVLGSNFNATSGFIEW 776

Query: 799 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
            DG  +GRPIT Y I  RTN N TW  +       E     GR+   +  VL PWS YEF
Sbjct: 777 ADGTNHGRPITSYAIEGRTNHNGTWRELINITYAAERRMTPGRRGVELGPVLSPWSKYEF 836

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           +VIAGN+LG G+PS PSPQYNT  D PY AP  +GGGGGK G L+I+WE L  E+ N+P 
Sbjct: 837 RVIAGNDLGVGQPSDPSPQYNTALDAPYVAPRNVGGGGGKAGSLTITWERLSPEEWNSPE 896

Query: 919 IYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
           I+Y++++R K D +E + + L+  GNVG+ VV +  E YY  YEV
Sbjct: 897 IWYQVYYRPKGDRSEPRKKNLRNLGNVGLYVVPVGEENYYFPYEV 941


>gi|307183641|gb|EFN70344.1| Contactin [Camponotus floridanus]
          Length = 1156

 Score =  819 bits (2116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/595 (68%), Positives = 493/595 (82%), Gaps = 4/595 (0%)

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           P + FP S FQQLKFPNNFPK FPEAP AG++VRLEC+AFGYPVPSYNWTRRGS LPR A
Sbjct: 321 PPQHFPAS-FQQLKFPNNFPKAFPEAPMAGEEVRLECIAFGYPVPSYNWTRRGSVLPRGA 379

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
           Y  ++NR+L IP V+VEDQGEY+CR  NDR ++E+SV ++IQA PNFTIPL DKHMDN+ 
Sbjct: 380 YATSYNRVLIIPRVRVEDQGEYVCRVYNDRLSIENSVQLTIQAAPNFTIPLVDKHMDNRG 439

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DLTWTCEAFG+PDVTY+WFRNGE+L+  TLP ED+DRY IQDNV+ I+YL+PERD AMYQ
Sbjct: 440 DLTWTCEAFGIPDVTYNWFRNGEILDMYTLPPEDRDRYTIQDNVINIKYLDPERDQAMYQ 499

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           CRAKNQLKT YSSAQLRVL+LKPSFKKRP+ESETYA EGGNVTI C PEAAP+PKFVWKK
Sbjct: 500 CRAKNQLKTVYSSAQLRVLSLKPSFKKRPMESETYAAEGGNVTIVCKPEAAPRPKFVWKK 559

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
           DGN+IGSGGRR+I E GNL+ISPVSRDD G Y CTATN +G DE++GRLIVL GP   E+
Sbjct: 560 DGNVIGSGGRRRILETGNLIISPVSRDDEGTYVCTATNQYGSDETRGRLIVLRGPELIER 619

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 744
           LPP++ ++ + N  LRC  +T+E+LDVAYIW HNG+RI + DL      + +IDG  L+I
Sbjct: 620 LPPRLIMSYNNNQTLRCLGNTDEMLDVAYIWRHNGMRIRDKDLE--NNRHWHIDGEYLDI 677

Query: 745 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 804
            NA+FA++GEYEC++KS VG+IS+KT +IV GPPG PGGVQVV + K SAT++WTDGA N
Sbjct: 678 INATFAESGEYECILKSAVGEISSKTDLIVNGPPGPPGGVQVVNIVKISATLRWTDGAFN 737

Query: 805 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           G+ IT Y I ARTNWN TWF + E++   E+DRY GRKEA +ENVL P++TYEF+++A N
Sbjct: 738 GKVITMYTISARTNWNRTWFPLVENITAIEMDRYNGRKEAFLENVLNPYTTYEFRILAFN 797

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
           ELGYG PSSPSPQY+TP DKP ++PS I GGGGKIGDL+I+W+PLP   QN P IYYKIF
Sbjct: 798 ELGYGPPSSPSPQYSTPPDKPTKSPSNISGGGGKIGDLTITWDPLPSSDQNGPGIYYKIF 857

Query: 925 WRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           WR+K +D+E+QS  L+EYGNVG +VV I S+FYYT+YEVKVQAIN +G GP SE 
Sbjct: 858 WRRKGHDSEYQSLPLREYGNVGSSVVPIQSQFYYTKYEVKVQAINVIGEGPISET 912



 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 286/733 (39%), Positives = 398/733 (54%), Gaps = 89/733 (12%)

Query: 3   LISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLD 62
           L+S+ +F+ +    VF+Q I      CPQHW+++++SCYRF+KSPL++R DA+ NC++  
Sbjct: 4   LLSNVVFLLILLLPVFAQNILHEPYECPQHWIRFQESCYRFIKSPLRSRMDARRNCQAFQ 63

Query: 63  SDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPE 121
           SDL ++N  +EH FI+Y+L WQDPQ R+WY G   QS + W+NE DGT L  +D AFLPE
Sbjct: 64  SDLLSINTLEEHRFILYELLWQDPQHRRWYTGIKLQSGS-WINEADGTALINMDNAFLPE 122

Query: 122 PADNV-QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDI 180
           P DN+  RDYLAYS+S +L+RWG E+VTG E LL+IC+ASI  LH L+ DDRTYQYG++I
Sbjct: 123 PNDNIIGRDYLAYSYSNNLQRWGLEKVTGREELLYICKASIVILHNLVEDDRTYQYGIEI 182

Query: 181 ENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVA 240
           +NP +IPRGPYFIKQP   VFD++K+ + ND++LSC AGGYP P+YEWFKEDY  DRL+A
Sbjct: 183 DNPLQIPRGPYFIKQPMSKVFDIAKKRVNNDVSLSCLAGGYPTPTYEWFKEDYENDRLIA 242

Query: 241 NLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL 300
             IDPLS+ R+T+SGG LII +P Q  DRGSYHCKA+NKFG+IISESV+L+FG+I EFNL
Sbjct: 243 TKIDPLSNNRYTVSGGTLIIYEPEQTHDRGSYHCKATNKFGTIISESVELSFGYILEFNL 302

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN----------FVEEDKRV----- 345
           KR  E G+ +WGKA++CDPP ++P     + +  FPN             E+ R+     
Sbjct: 303 KRGEERGDNHWGKAVYCDPPQHFPAS---FQQLKFPNNFPKAFPEAPMAGEEVRLECIAF 359

Query: 346 ---------------------FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
                                  SY+  L    +   D G Y C V +       N    
Sbjct: 360 GYPVPSYNWTRRGSVLPRGAYATSYNRVLIIPRVRVEDQGEYVCRVYNDRLSI-ENSVQL 418

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS------ 438
            ++  P  NF         P         GD +   C AFG P  +YNW R G       
Sbjct: 419 TIQAAP--NF-------TIPLVDKHMDNRGD-LTWTCEAFGIPDVTYNWFRNGEILDMYT 468

Query: 439 --PLPRNAYFENFNRILTIPNVKVE-DQGEYICRASNDRSALESSVTISIQA-EPNFTI- 493
             P  R+ Y    N ++ I  +  E DQ  Y CRA N    + SS  + + + +P+F   
Sbjct: 469 LPPEDRDRYTIQDN-VINIKYLDPERDQAMYQCRAKNQLKTVYSSAQLRVLSLKPSFKKR 527

Query: 494 PL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR 552
           P+ ++ +     ++T  C+    P   + W ++G ++ S         R  ++   L I 
Sbjct: 528 PMESETYAAEGGNVTIVCKPEAAPRPKFVWKKDGNVIGS------GGRRRILETGNLIIS 581

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-- 610
            ++ + D   Y C A NQ  +  +  +L VL   P   +R L          N T+ C  
Sbjct: 582 PVSRD-DEGTYVCTATNQYGSDETRGRLIVLR-GPELIER-LPPRLIMSYNNNQTLRCLG 638

Query: 611 NPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--------LLISPVSRDDSGIYSCTATN 662
           N +      ++W+ +G  I    R K  EN          L I   +  +SG Y C   +
Sbjct: 639 NTDEMLDVAYIWRHNGMRI----RDKDLENNRHWHIDGEYLDIINATFAESGEYECILKS 694

Query: 663 VHGMDESKGRLIV 675
             G   SK  LIV
Sbjct: 695 AVGEISSKTDLIV 707



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 15/132 (11%)

Query: 853  WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL--P 910
            ++ YE KV A N +G G P S +    +  D P  AP ++         L+I+W+P+   
Sbjct: 891  YTKYEVKVQAINVIGEG-PISETTTVYSAEDMPQVAPQQVYSMSYNSTSLNITWQPIEQT 949

Query: 911  REKQNAPNIYYKI-FWRK----KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
            RE+     I ++I +W++    ++ T + S T + +    + V   P  +YY    VKV 
Sbjct: 950  RERVRGKLIGHRIKYWKESVPEEHATYYLSRTTRPWS---LVVGLQPDTYYY----VKVM 1002

Query: 966  AINDVGPGPESE 977
            A N  G GPESE
Sbjct: 1003 AYNSAGEGPESE 1014


>gi|312383176|gb|EFR28362.1| hypothetical protein AND_03853 [Anopheles darlingi]
          Length = 895

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/629 (54%), Positives = 438/629 (69%), Gaps = 13/629 (2%)

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLE 420
           +D  NYSC V S VSDTGRNGPFF L V P  ++Q L F N+FPK FP+ P AG  VRLE
Sbjct: 1   MDRANYSCTVLSTVSDTGRNGPFFELSVSPSPHYQDLIFANSFPKAFPKVPLAGKDVRLE 60

Query: 421 CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           C+ +GYPV SYNWTRR   LPR +  ENFNR+L I N  V D GEY C A N + ++  S
Sbjct: 61  CMTYGYPVASYNWTRRNGNLPRLSRLENFNRVLVIQNATVNDNGEYACTARNGKKSIVQS 120

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           + +++Q EPNFTIPL D+  D Q+ +T+ CEAF +PDV Y+W++NGEL++       ++D
Sbjct: 121 IFVNVQMEPNFTIPLRDRTRDFQSSVTFLCEAFAIPDVNYTWYKNGELMDDREGGKFNRD 180

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           +Y IQDN+L I +L PE D  MYQC+A NQLK  YSSAQLRVL++KPSFKKRPLESE Y+
Sbjct: 181 KYTIQDNLLKINFLEPETDDGMYQCKATNQLKGVYSSAQLRVLSMKPSFKKRPLESEIYS 240

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
              GN TI C PEAAP PK VWKKDG++IGSGG RKI+  G L ISP SRDD G Y+C A
Sbjct: 241 IANGNTTIVCEPEAAPTPKIVWKKDGSVIGSGGHRKIYPTGTLFISPTSRDDEGTYTCIA 300

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
           +N  GM ESK RLIVL    + EQLP K+       L LRC    ++LLDVA+IWTHNG 
Sbjct: 301 SNNQGMAESKARLIVLQELRFTEQLPSKLIKQIGEMLYLRCDVTYDQLLDVAFIWTHNGQ 360

Query: 721 ------------RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
                       R  N+   + ++  I I    LE+ N +  D GEYEC+ KS+V +I +
Sbjct: 361 VLNVDNPEDERRRTANLGPAQWDSARIRIHYNNLEVHNLTLVDGGEYECIAKSSVNRIVS 420

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
           K+ V+++GPPG PG V+V+++ KT A ++WT+G  NGRPI +Y I+ RTNWN TW N+++
Sbjct: 421 KSQVLIQGPPGAPGAVKVIDIKKTEAMLEWTNGNENGRPILYYNILGRTNWNRTWVNITQ 480

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
           HVI +EVDRY GR+ A++ N L PW  YEF V+A N+LG G PS PSP Y+T  DKPY A
Sbjct: 481 HVIAQEVDRYNGRRRATVGN-LTPWCGYEFSVVAVNDLGIGAPSLPSPVYSTQKDKPYIA 539

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           P  +GGGGGKIGDL+I+W+PL  ++QN+  I+YK+F+R     E+ SE LK  GN+G AV
Sbjct: 540 PRNVGGGGGKIGDLTITWDPLLPQEQNSIEIHYKVFYRLHGQREWASEELKRQGNMGKAV 599

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           + + ++ YYT+YEVKVQAIND+G GP SE
Sbjct: 600 IHVATDKYYTKYEVKVQAINDLGMGPISE 628



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 175/731 (23%), Positives = 262/731 (35%), Gaps = 141/731 (19%)

Query: 323 YPGVNYYWAR--DYFPNF--VEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTG 378
           YP  +Y W R     P    +E   RV V  +  +        D G Y+C        T 
Sbjct: 66  YPVASYNWTRRNGNLPRLSRLENFNRVLVIQNATVN-------DNGEYAC--------TA 110

Query: 379 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD---KVRLECVAFGYPVPSYNW-- 433
           RNG     K    S F  ++   NF  T P   +  D    V   C AF  P  +Y W  
Sbjct: 111 RNGK----KSIVQSIFVNVQMEPNF--TIPLRDRTRDFQSSVTFLCEAFAIPDVNYTWYK 164

Query: 434 ------TRRGSPLPRNAYFENFNRILTIPNVKVE-DQGEYICRASNDRSALESSVTISI- 485
                  R G    R+ Y    N +L I  ++ E D G Y C+A+N    + SS  + + 
Sbjct: 165 NGELMDDREGGKFNRDKYTIQDN-LLKINFLEPETDDGMYQCKATNQLKGVYSSAQLRVL 223

Query: 486 QAEPNFTI-PL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
             +P+F   PL ++ +     + T  CE    P     W ++G ++ S         R  
Sbjct: 224 SMKPSFKKRPLESEIYSIANGNTTIVCEPEAAPTPKIVWKKDGSVIGS------GGHRKI 277

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
                L I   + + D   Y C A N      S A+L VL      ++ P +     GE 
Sbjct: 278 YPTGTLFISPTSRD-DEGTYTCIASNNQGMAESKARLIVLQELRFTEQLPSKLIKQIGEM 336

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENG--------------NLLI 645
             +      +      F+W  +G ++        RR+    G              NL +
Sbjct: 337 LYLRCDVTYDQLLDVAFIWTHNGQVLNVDNPEDERRRTANLGPAQWDSARIRIHYNNLEV 396

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             ++  D G Y C A +      SK ++++        Q PP     A   +++     T
Sbjct: 397 HNLTLVDGGEYECIAKSSVNRIVSKSQVLI--------QGPP----GAPGAVKVIDIKKT 444

Query: 706 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA-DAGEYECVVKSTVG 764
           E +L+    WT NG   G   L        N +   + IT    A +   Y    ++TVG
Sbjct: 445 EAMLE----WT-NGNENGRPILYYNILGRTNWNRTWVNITQHVIAQEVDRYNGRRRATVG 499

Query: 765 KIS-----TKTTVIVE----GPPGLPGGVQVVEVHK---------------TSATIQW-- 798
            ++       + V V     G P LP  V   +  K                  TI W  
Sbjct: 500 NLTPWCGYEFSVVAVNDLGIGAPSLPSPVYSTQKDKPYIAPRNVGGGGGKIGDLTITWDP 559

Query: 799 -TDGATNGRPITHYKIIARTNWNSTWF--------NVSEHVIGKEVDRYTGRKEASIENV 849
                 N   I HYK+  R +    W         N+ + VI    D+Y           
Sbjct: 560 LLPQEQNSIEI-HYKVFYRLHGQREWASEELKRQGNMGKAVIHVATDKY----------- 607

Query: 850 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 909
              ++ YE KV A N+LG G  S P   Y+   D P  AP +          L+++W P+
Sbjct: 608 ---YTKYEVKVQAINDLGMGPISEPVTIYSA-EDMPQVAPQQTIARSFNSTALNVTWVPV 663

Query: 910 P--REKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
              RE      I +++ +W+K++  E     L         +V +  + YY    VKV A
Sbjct: 664 SQNRESIRGKLIGHRLKYWKKEHKEEDSVYYLSRTTRPWALIVGLEPDTYYF---VKVMA 720

Query: 967 INDVGPGPESE 977
            N  G GPESE
Sbjct: 721 YNAAGEGPESE 731



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 145/398 (36%), Gaps = 53/398 (13%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           D+ L C   GYP  SY W + +    RL           R       L+I +   V D G
Sbjct: 56  DVRLECMTYGYPVASYNWTRRNGNLPRL----------SRLENFNRVLVIQNA-TVNDNG 104

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYW 330
            Y C A N   SI+ +S+ +       F +       +        C+     P VNY W
Sbjct: 105 EYACTARNGKKSIV-QSIFVNVQMEPNFTIPLRDRTRDFQSSVTFLCE-AFAIPDVNYTW 162

Query: 331 AR------DYFPNFVEEDKRVFVSYDGALYFSALE-QIDAGNYSCNVQSKVSDTGRNGPF 383
            +      D        DK  +   D  L  + LE + D G Y C   +++         
Sbjct: 163 YKNGELMDDREGGKFNRDK--YTIQDNLLKINFLEPETDDGMYQCKATNQLKG------- 213

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEA---PKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
               V+  +  + L    +F K   E+     A     + C     P P   W + GS +
Sbjct: 214 ----VYSSAQLRVLSMKPSFKKRPLESEIYSIANGNTTIVCEPEAAPTPKIVWKKDGSVI 269

Query: 441 PRNAYFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 499
               + + +    L I     +D+G Y C ASN++   ES   + +  E  FT  L  K 
Sbjct: 270 GSGGHRKIYPTGTLFISPTSRDDEGTYTCIASNNQGMAESKARLIVLQELRFTEQLPSKL 329

Query: 500 MDNQADLTWT-CEAF--GVPDVTYSWFRNGELLNSETLPLE------------DQDRYFI 544
           +    ++ +  C+     + DV + W  NG++LN +    E            D  R  I
Sbjct: 330 IKQIGEMLYLRCDVTYDQLLDVAFIWTHNGQVLNVDNPEDERRRTANLGPAQWDSARIRI 389

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
             N L +  L    D   Y+C AK+ +    S +Q+ +
Sbjct: 390 HYNNLEVHNLT-LVDGGEYECIAKSSVNRIVSKSQVLI 426



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 127/336 (37%), Gaps = 56/336 (16%)

Query: 206 RSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265
           R   + +T  C A   P+ +Y W+K   + D          +  ++T+    L IN    
Sbjct: 140 RDFQSSVTFLCEAFAIPDVNYTWYKNGELMDDREGG---KFNRDKYTIQDNLLKINFLEP 196

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE-----IGNQNWGKAMFCDPP 320
             D G Y CKA+N+   + S S QL    +     KR  E     I N N    + C+P 
Sbjct: 197 ETDDGMYQCKATNQLKGVYS-SAQLRVLSMKPSFKKRPLESEIYSIANGN--TTIVCEPE 253

Query: 321 TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDT 377
              P     W +D         ++++ +  G L+ S   + D G Y+C   N Q      
Sbjct: 254 AA-PTPKIVWKKDGSVIGSGGHRKIYPT--GTLFISPTSRDDEGTYTCIASNNQGMAESK 310

Query: 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWTR 435
            R      L V      Q+L+F    P    +  + G+ + L C V +   +  ++ WT 
Sbjct: 311 AR------LIV-----LQELRFTEQLPSKLIK--QIGEMLYLRCDVTYDQLLDVAFIWTH 357

Query: 436 RGSPL----PRNAYFENFN---------RI------LTIPNVKVEDQGEYICRASNDRSA 476
            G  L    P +      N         RI      L + N+ + D GEY C A +  + 
Sbjct: 358 NGQVLNVDNPEDERRRTANLGPAQWDSARIRIHYNNLEVHNLTLVDGGEYECIAKSSVNR 417

Query: 477 LESSVTISIQAEPNFTIPLTDKHMD---NQADLTWT 509
           + S   + IQ  P    P   K +D    +A L WT
Sbjct: 418 IVSKSQVLIQGPPG--APGAVKVIDIKKTEAMLEWT 451


>gi|195568167|ref|XP_002102089.1| GD19723 [Drosophila simulans]
 gi|194198016|gb|EDX11592.1| GD19723 [Drosophila simulans]
          Length = 536

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 306/537 (56%), Positives = 378/537 (70%), Gaps = 8/537 (1%)

Query: 345 VFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFP 404
           VFVS DGALYFS +E +D  NYSC VQ+ VSDTGRNGPFFPL+V P+SN+Q L F N FP
Sbjct: 1   VFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFP 60

Query: 405 KTFPEAPKAGDKVRLECVAFGYP-VPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQ 463
           K FPEAP AGD++RLEC+AF  P  PSYNWTR+G PL R+AY  N+ R+L I N    D 
Sbjct: 61  KVFPEAPVAGDEIRLECMAFRLPPFPSYNWTRQGLPLQRSAYTINYGRVLIIQNATTNDN 120

Query: 464 GEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWF 523
           GEY C  +N R  L  S+ I+IQ  P FTIPL D   D  +D+T+ CEAF +PD  Y+W+
Sbjct: 121 GEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDVTFICEAFAIPDANYTWY 180

Query: 524 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
           +N E L+   +   ++DRY IQDNVLTI++L  ++D AMYQC A+NQLKT +SSAQLRVL
Sbjct: 181 KNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDDAMYQCGAQNQLKTSFSSAQLRVL 237

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 643
           ++KPSFKK PLESE YA   GN TI C+PEAAP+PKF WKKDG +IGSGG R+I  +G L
Sbjct: 238 SMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTL 297

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            I+P SRDD GIY+C A+N  G DES  R+IVL    + E  P +I    H  + L C A
Sbjct: 298 TIAPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEA 357

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
             +ELLD+AY+W HNG  + N   N   T  I +D   L + N S  DAG+YECVVKS V
Sbjct: 358 AFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAV 414

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 823
            +IS+KT+V +EG PG PGGVQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW
Sbjct: 415 NEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVDGSNNGRAIRYYNILGRTNWNRTW 474

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
            NVS HV  +EVDRYT R++A + N L PWS YEF V A N+LG G PS+PSP Y+T
Sbjct: 475 VNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYST 530



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 83/382 (21%), Positives = 146/382 (38%), Gaps = 36/382 (9%)

Query: 210 NDITLSCYAGGYPN-PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
           ++I L C A   P  PSY W ++             PL    +T++ G ++I       D
Sbjct: 71  DEIRLECMAFRLPPFPSYNWTRQGL-----------PLQRSAYTINYGRVLIIQNATTND 119

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNY 328
            G Y C  +N   +++ +S+ +      +F +     I + N      C+     P  NY
Sbjct: 120 NGEYSCTITNPRKTLM-KSIYINIQMRPQFTIPLKDMIKDYNSDVTFICEAFA-IPDANY 177

Query: 329 YW---ARDYFPNFVEEDKRVFVSYDGALYFSALEQ-IDAGNYSCNVQSKVSDTGRNGPFF 384
            W   A    P  +  D+  ++  D  L    LE+  D   Y C  Q+++  +  +    
Sbjct: 178 TWYKNAERLDPANINRDR--YIIQDNVLTIKFLEKDKDDAMYQCGAQNQLKTSFSSAQLR 235

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
            L + P  +F++    +     +           + C     P P + W + G  +    
Sbjct: 236 VLSMKP--SFKKHPLESEVYAVY------NGNTTIVCDPEAAPRPKFQWKKDGQVIGSGG 287

Query: 445 YFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
           +     +  LTI     +D+G Y C ASN     ES   + +  E  F      + +  +
Sbjct: 288 HRRILPSGTLTIAPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKE 347

Query: 504 ADLTWT-CEAF--GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
            DL +  CEA    + D+ Y W  NGE+L +     +   R  +  N LT+ +    RD 
Sbjct: 348 HDLIFLHCEAAFDELLDIAYVWKHNGEVLKNNH---DGTGRIIVDWNRLTV-HNTSMRDA 403

Query: 561 AMYQCRAKNQLKTRYSSAQLRV 582
             Y+C  K+ +    S   + +
Sbjct: 404 GDYECVVKSAVNEISSKTSVSI 425


>gi|345481084|ref|XP_001605461.2| PREDICTED: contactin [Nasonia vitripennis]
          Length = 937

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 299/564 (53%), Positives = 378/564 (67%), Gaps = 33/564 (5%)

Query: 444 AYFENFNRILTIPNVKVEDQGEYICRA---------SNDRS---ALESSVTISIQAEPNF 491
            Y E   R   +  V  +D   YIC A         ++DR+    +E +  + I   P F
Sbjct: 135 GYSEGLKR-WGLEKVNGQDAYYYICEAPAINLQYLHTDDRTYQYGIEINDPLKIPRGPTF 193

Query: 492 TIPLTDKHMDNQA-----DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRY 542
           T    +K  D        D+T +C A G P  TY WF+    N  L++ +  PL   +RY
Sbjct: 194 TKQPENKVFDVTKRVVNNDVTLSCLADGYPTPTYEWFKEDFENDRLVSKKIDPLS-HNRY 252

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKT-RYSSAQLRVLT-----LKPSFKKRPLES 596
            I    L I   N   D   Y C+A N+  T R  S +L         LKPSFKKRPLE 
Sbjct: 253 TISGGTLIIFSPNQTEDRGTYHCKATNKFGTIRSESVELXXXXXXXXXLKPSFKKRPLEP 312

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
           ETYA EGGNVT+ CNPEAAP+PKF WKKDGN++GSGGRR+I + G+L+ISPVSRDD G Y
Sbjct: 313 ETYAAEGGNVTLICNPEAAPRPKFTWKKDGNVLGSGGRRRITDTGSLIISPVSRDDEGTY 372

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
            C  +N +G DES+GRLIVL+GP   E LPP I  A + N  LRC A+T+E+LDVAYIW 
Sbjct: 373 VCQVSNEYGNDESRGRLIVLNGPVLIESLPPTIRTAVNLNQTLRCMAYTDEMLDVAYIWM 432

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           HN +RI + DL     P+I I+GG L+I NA+FA+AG+YEC+VKSTVG+IS++TT+ +EG
Sbjct: 433 HNDMRIRDKDLK--ANPHIVINGGQLDIINATFAEAGDYECIVKSTVGRISSRTTITIEG 490

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV- 835
           PPG PGG+QV+ V KTS  + WTDGA NGRPI  Y I A+TNWN TWFN++E      + 
Sbjct: 491 PPGPPGGIQVLNVVKTSVDLSWTDGAYNGRPIDRYTISAKTNWNQTWFNLTEDFTAYTIG 550

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
           DR TGRK A +ENVL P++TYEF++ AGNELGYG PS PSPQY+TP+DKP  APS I GG
Sbjct: 551 DRNTGRKRAHLENVLRPFTTYEFRIQAGNELGYGPPSLPSPQYSTPSDKPIVAPSNIRGG 610

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFW-RKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGK+GDL+I W+PL   +Q  P I+YK++W RKK ++EFQS  LKE+GNVG++VV I S+
Sbjct: 611 GGKLGDLTIKWDPLKSSEQYGPGIFYKVYWRRKKGESEFQSLALKEHGNVGMSVVPIQSQ 670

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
           +YYTEYEV VQA NDVG GP+SE+
Sbjct: 671 YYYTEYEVMVQAANDVGYGPKSEI 694



 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 210/533 (39%), Positives = 282/533 (52%), Gaps = 36/533 (6%)

Query: 1   MSLISSCLFIFVSFHSVFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNC 58
           MSL      +     +  SQT   +E+E RCP+ W+ ++DSCYRF+KS  + R DA+ NC
Sbjct: 1   MSLKIRITLLIGIISAAVSQTAYYNEIEHRCPKPWIMFQDSCYRFIKS-FRPREDARRNC 59

Query: 59  KSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAF 118
            +  SDL ++N  DEHG I+ +LF QDPQ RKWY G   Q    W NEDGT L  ++ AF
Sbjct: 60  LAYQSDLLSINSLDEHGNILRELFLQDPQHRKWYTGIKLQGA-YWTNEDGTQLINMENAF 118

Query: 119 LPEPADNVQ-RDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYG 177
           LPE  DN   +DYL Y +S+ LKRWG E+V G +   +ICEA    L YL  DDRTYQYG
Sbjct: 119 LPEKPDNYYGKDYLVYGYSEGLKRWGLEKVNGQDAYYYICEAPAINLQYLHTDDRTYQYG 178

Query: 178 MDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDR 237
           ++I +P KIPRGP F KQP + VFD++KR + ND+TLSC A GYP P+YEWFKED+  DR
Sbjct: 179 IEINDPLKIPRGPTFTKQPENKVFDVTKRVVNNDVTLSCLADGYPTPTYEWFKEDFENDR 238

Query: 238 LVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE 297
           LV+  IDPLS  R+T+SGG LII  P Q EDRG+YHCKA+NKFG+I SESV+L       
Sbjct: 239 LVSKKIDPLSHNRYTISGGTLIIFSPNQTEDRGTYHCKATNKFGTIRSESVELXXXXXXX 298

Query: 298 FNLKRA-------PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
             LK +       PE      G       P   P   + W +D   N +    R  ++  
Sbjct: 299 XXLKPSFKKRPLEPETYAAEGGNVTLICNPEAAPRPKFTWKKD--GNVLGSGGRRRITDT 356

Query: 351 GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK--VFPHSNFQQLKFPNNFPKTFP 408
           G+L  S + + D G Y C V ++  +    G    L   V   S    ++   N  +T  
Sbjct: 357 GSLIISPVSRDDEGTYVCQVSNEYGNDESRGRLIVLNGPVLIESLPPTIRTAVNLNQT-- 414

Query: 409 EAPKAGDKVRLECVAFGYPV--PSYNWTR-----RGSPLPRNAYFENFNRILTIPNVKVE 461
                     L C+A+   +   +Y W       R   L  N +       L I N    
Sbjct: 415 ----------LRCMAYTDEMLDVAYIWMHNDMRIRDKDLKANPHIVINGGQLDIINATFA 464

Query: 462 DQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH-MDNQADLTWTCEAF 513
           + G+Y C   +    + S  TI+I+  P     +   + +    DL+WT  A+
Sbjct: 465 EAGDYECIVKSTVGRISSRTTITIEGPPGPPGGIQVLNVVKTSVDLSWTDGAY 517



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 15/132 (11%)

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL--P 910
           ++ YE  V A N++GYG P S      +  D P  AP  +         L+++W P+   
Sbjct: 673 YTEYEVMVQAANDVGYG-PKSEIFTIYSAEDMPQVAPQLVTAFSYNGTALNVTWNPIEQT 731

Query: 911 REKQNAPNIYYKIFWRKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
           RE+     I ++I + K+N  E     + S T + +    + V   P  +YY    VKV 
Sbjct: 732 RERVRGRLIGHRIKYWKENGREEDAVYYLSRTTRPWS---LVVGLQPDTYYY----VKVM 784

Query: 966 AINDVGPGPESE 977
           A N  G GPESE
Sbjct: 785 AYNSAGEGPESE 796


>gi|269785101|ref|NP_001161506.1| contactin-like protein precursor [Saccoglossus kowalevskii]
 gi|268053975|gb|ACY92474.1| axonin [Saccoglossus kowalevskii]
          Length = 1048

 Score =  501 bits (1289), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 300/830 (36%), Positives = 444/830 (53%), Gaps = 64/830 (7%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
            Y + I   DK PRGP+ I +P D +F+    S L  +++ C A GYP P+Y+W K D  
Sbjct: 13  HYAVCIAREDKEPRGPHIIVEPKDTIFNAD--SNLPSVSIECEADGYPRPTYKWKKNDVD 70

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
                   ++ L+D R TL  G L I +PRQ  D GS+ C ASN +G ++S+   L+FGF
Sbjct: 71  --------VNILADNRLTLMEGKLTIAEPRQ-SDAGSFQCFASNDYGVVLSQIATLSFGF 121

Query: 295 IGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
           +  F  + ++P++  +  G  + C+ P  YPG+++YW +D   NFV E +R+ ++ +G +
Sbjct: 122 VDPFPRQGQSPKVATEGNGFMLSCNAPDAYPGLSFYWVKDIEFNFVRESERLMIASNGNM 181

Query: 354 YFSALEQIDAGNYSC---NVQSKVSDTGRNG---PFFPLKVFPHSNFQQLKFPNNFPKTF 407
           YF+ ++Q D G+YSC   N+    S  G++G   P   + V  + NF   + P       
Sbjct: 182 YFAKVDQGDQGDYSCIVKNILDAASGAGQDGRISPQISVSVLTN-NFAGFQSPKVSHAVQ 240

Query: 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRR---GSPLPRNAYFENFNRILTIPNVKVEDQG 464
            +    GD VRLEC   G PVP  +W R    G  +P +A F+N N++L + N++ ED G
Sbjct: 241 DQTVLEGDNVRLECFFRGNPVPRLSWERVAPFGQAIPSSASFDNQNQVLILRNIQEEDGG 300

Query: 465 EYICRASNDR-------SALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
            Y C A N         +   S+ TI ++  P +   L D   D +   T+ CEA G   
Sbjct: 301 NYQCIAENSPDNQNSRPTYSRSTGTIDVRVPPKWIKQLEDLEADIRGSATFECEATGTEP 360

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL---- 571
           +TY W+RNGE   + T       R+   +N   LTI  L  + D AMYQC+A N L    
Sbjct: 361 ITYKWYRNGEQFTTRT-------RHSFSNNFKRLTINSLQ-DADSAMYQCKAANTLLDKE 412

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG- 630
           +  YS+ QL VL + PSF   PL     A   GN+TI CNPEAAPKP F W  +   I  
Sbjct: 413 RAIYSTGQLTVLAIAPSFADTPLLQNQPAARNGNITIECNPEAAPKPDFTWLHNNRPISI 472

Query: 631 -SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
            +GG   I +NG+L I  V   D G Y+C A N  G D+S+GRL++  G +   Q P  +
Sbjct: 473 TNGGHYTILDNGHLFIQNVQDSDGGKYTCIARNYIGEDQSEGRLVIRDG-TVITQWPLAM 531

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749
           +I    +  L+C A  + +LD+ YIW  +GV+I  +D    ++    +  G LEI +A  
Sbjct: 532 SIEVGDDATLKCRATADPVLDLTYIWLLDGVQIDVLD----DSHYARLRDGNLEIIDAEL 587

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 809
             +G Y C   +T+ ++S    VI++G PG P GV+  ++   S  ++W++G +N  PI 
Sbjct: 588 RQSGVYTCTAHTTIDEVSKSAEVIIKGAPGPPAGVRASDITTNSCQLRWSEGFSNNDPIK 647

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y + +RT     W           ++R      ++  N L PWS Y+F+V A N  G G
Sbjct: 648 TYTVQSRTKEEPEWI----------IEREGIPDLSASLNSLSPWSNYQFRVSAVNSYGRG 697

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
           EPS PSP+Y+T  DKPY  P  +GGGGGK GDL I+W+PL R+ QNAP + Y ++W+K N
Sbjct: 698 EPSLPSPEYSTHEDKPYHEPRNVGGGGGKTGDLRITWDPLSRQDQNAPGLGYYVYWKKAN 757

Query: 930 DTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGPESEV 978
             E  S+ +     VG+  V+ +P+   Y +Y+V+V   N  G GP S +
Sbjct: 758 SREEYSKGVVNDEAVGVYTVKGVPT---YVQYDVRVGVFNAKGDGPNSTI 804


>gi|357617701|gb|EHJ70941.1| contactin [Danaus plexippus]
          Length = 671

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/420 (60%), Positives = 315/420 (75%), Gaps = 5/420 (1%)

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           MYQC AKNQL+T+YS+ QLRVL+LKPSFKK PLESETY  EGGNVT+ CNPEAAPKP F 
Sbjct: 1   MYQCEAKNQLRTKYSTGQLRVLSLKPSFKKHPLESETYGSEGGNVTLRCNPEAAPKPTFT 60

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           WKKD  +IG+GG+R I ENGNL+I  +SRDD G+Y+C A N +G DES+GRLIVL  P +
Sbjct: 61  WKKDNIVIGAGGKRFITENGNLIIRQLSRDDEGVYTCVAKNQYGTDESRGRLIVLRAPRF 120

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN-MDLNELETPNINIDGG 740
            E+LPP+IT    + + L C+A  + +LD AY+W HNG+R+    DL       I IDGG
Sbjct: 121 IERLPPRITTQVGQVIFLHCNAEIDSMLDTAYLWNHNGIRMKEAADL--YADKRIKIDGG 178

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
            L I + S +D GEYEC+VKS +G+IST+T + +EGPPG PGGVQV  + ++S T++WTD
Sbjct: 179 ELTIFDVSLSDVGEYECIVKSAIGRISTRTQLRIEGPPGPPGGVQVSNIQQSSVTLEWTD 238

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-EVDRYTGRKEASIENVLVPWSTYEFK 859
              NGRPIT+Y +  RT WNSTWF +SE V    E+DRY GRK A++   L+PWS YEF+
Sbjct: 239 SNPNGRPITNYVVTGRTQWNSTWFVLSESVTNVFEIDRYNGRKRATVTTTLMPWSVYEFR 298

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V A N LG GEPSSPSPQ++T ADKPY +P  IGGGGGKIGDL+I W PLPR  QN P I
Sbjct: 299 VQAVNSLGIGEPSSPSPQFSTQADKPYHSPFNIGGGGGKIGDLTIKWTPLPRSLQNGPGI 358

Query: 920 YYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YYKIFWR+ N + EFQS +LKEYGN+G+ VV +P ++++T Y +KVQA ND+G GPESEV
Sbjct: 359 YYKIFWRRNNTEVEFQSLSLKEYGNIGMHVVHVPLDYFFTPYNIKVQAFNDIGAGPESEV 418



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 129/567 (22%), Positives = 213/567 (37%), Gaps = 103/567 (18%)

Query: 466 YICRASND-RSALESSVTISIQAEPNFTI-PL-TDKHMDNQADLTWTCEAFGVPDVTYSW 522
           Y C A N  R+   +     +  +P+F   PL ++ +     ++T  C     P  T++W
Sbjct: 2   YQCEAKNQLRTKYSTGQLRVLSLKPSFKKHPLESETYGSEGGNVTLRCNPEAAPKPTFTW 61

Query: 523 FRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
            ++  ++ +         R+  ++  L IR L+ + D  +Y C AKNQ  T  S  +L V
Sbjct: 62  KKDNIVIGA------GGKRFITENGNLIIRQLSRD-DEGVYTCVAKNQYGTDESRGRLIV 114

Query: 583 LTLKPSFKKRPLESETYAGEGGNVTIFCNPE--AAPKPKFVWKKDGNIIGSGG-----RR 635
           L      ++ P    T  G+   + + CN E  +     ++W  +G  +         +R
Sbjct: 115 LRAPRFIERLPPRITTQVGQV--IFLHCNAEIDSMLDTAYLWNHNGIRMKEAADLYADKR 172

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
              + G L I  VS  D G Y C   +  G   ++             QL  +       
Sbjct: 173 IKIDGGELTIFDVSLSDVGEYECIVKSAIGRISTR------------TQLRIEGPPGPPG 220

Query: 696 NLQLRCSAHTEELLDVAYIWTH---NGVRIGN-------------MDLNELETPNINID- 738
            +Q+     +   L+    WT    NG  I N               L+E  T    ID 
Sbjct: 221 GVQVSNIQQSSVTLE----WTDSNPNGRPITNYVVTGRTQWNSTWFVLSESVTNVFEIDR 276

Query: 739 --GGLLEITNASFADAGEYECVVKST----VGKISTKT---TVIVEGPPGLPGGVQVVEV 789
             G        +      YE  V++     +G+ S+ +   +   + P   P  +     
Sbjct: 277 YNGRKRATVTTTLMPWSVYEFRVQAVNSLGIGEPSSPSPQFSTQADKPYHSPFNIGGGGG 336

Query: 790 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWF---------NVSEHVIGKEVDR 837
                TI+WT       NG P  +YKI  R N     F         N+  HV+   +D 
Sbjct: 337 KIGDLTIKWTPLPRSLQNG-PGIYYKIFWRRNNTEVEFQSLSLKEYGNIGMHVVHVPLDY 395

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
           +              ++ Y  KV A N++G G P S      +  D P  AP ++     
Sbjct: 396 F--------------FTPYNIKVQAFNDIGAG-PESEVVTIYSAEDMPQVAPQQVYSRSF 440

Query: 898 KIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTE----FQSETLKEYGNVGIAVVR 950
               L+++W P+   R++     I +++ +W++ N  E    + S T +   N  + V  
Sbjct: 441 NSTSLNVTWNPIDQSRDRLRGKLIGHRLKYWKQANKEEECIYYLSRTTR---NWALIVGL 497

Query: 951 IPSEFYYTEYEVKVQAINDVGPGPESE 977
            P  +YY    VKV A N  G GPESE
Sbjct: 498 QPDTYYY----VKVMAFNSAGEGPESE 520



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 34/178 (19%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV--ED 268
           ++TL C     P P++ W K+         N++     KRF    GNLII   RQ+  +D
Sbjct: 44  NVTLRCNPEAAPKPTFTWKKD---------NIVIGAGGKRFITENGNLII---RQLSRDD 91

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPT----- 321
            G Y C A N++G+  S   +L       F  +  P I  Q  G+ +F  C+        
Sbjct: 92  EGVYTCVAKNQYGTDESRG-RLIVLRAPRFIERLPPRITTQV-GQVIFLHCNAEIDSMLD 149

Query: 322 -----NYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 374
                N+ G+    A D +      DKR+ +   G L    +   D G Y C V+S +
Sbjct: 150 TAYLWNHNGIRMKEAADLY-----ADKRIKID-GGELTIFDVSLSDVGEYECIVKSAI 201


>gi|405975991|gb|EKC40516.1| Contactin [Crassostrea gigas]
          Length = 1161

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 335/992 (33%), Positives = 497/992 (50%), Gaps = 62/992 (6%)

Query: 26  ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD 85
            + CP +W  + ++CY+F   PL+  ++A   C++  + L +VN A EH FI   L   D
Sbjct: 24  RMYCPINWYPFGNNCYKFNVYPLRIYDEAAKACEAQGAGLLSVNSAQEHQFIDTTLQRID 83

Query: 86  PQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNVQ--RDYLAYSFSQSLKRWG 143
             R  WY  G +   ++  + DGT ++  D  F   P D++Q    ++ Y +S SLK++ 
Sbjct: 84  RDRSFWYTSGYRDENHIKWSGDGT-VSRDDVMFWASP-DDLQGFSKFIVYKYSASLKKYA 141

Query: 144 FERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDL 203
           +    G E   FICE  I +   LL ++R + YG ++ +P   PRGP F   P ++V  L
Sbjct: 142 WGATDGREAYRFICEIPITETQRLLQENRDFTYGSNLTDPTLAPRGPRFTMHPINMV--L 199

Query: 204 SKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP 263
           + RS L  I   C A G P P Y W + D      V         + +T+S G L  N  
Sbjct: 200 TNRSHLPSI--ECEATGIPQPRYVWHRTDVTGSEEVIG-----KSEFYTISNGKLTFNRI 252

Query: 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW--GKAMFCDPPT 321
            +  D G YHC+ASNKFGS+ S   ++ FG + +F    AP +       G  + C+PPT
Sbjct: 253 DERRDAGIYHCEASNKFGSVRSAPSKITFGSLAQFP-NVAPGVNRVALYQGTYLNCNPPT 311

Query: 322 NYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV------- 374
           + P V+Y W +         +   F+S DG LYFS ++Q D GNY C V  K        
Sbjct: 312 HKPAVSYQWMKGTSFLIQALNSYFFLSADGNLYFSEVQQNDEGNYHCIVTLKAFPGDTLA 371

Query: 375 SDTGRNGPFFPLKVFPHSNFQQLKFP---NNFPKTFPEAPKAGDKVRLECVAFGYPVPSY 431
           +D         +K+    +   L  P   ++FP  FP++P+ G K+ +EC+A+G     Y
Sbjct: 372 TDQPPTETSLDIKLDVLGDTAALYPPQIHDDFPAVFPKSPRLGQKITIECLAYGRTPLRY 431

Query: 432 NWTRRGSP-LPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 490
            W++ G+  LP  AY +NF+R+L IPNV+  D+G Y C              ++I A+P 
Sbjct: 432 RWSKSGNGNLPSKAYTQNFDRVLVIPNVQFTDEGTYTCHVQGRTQTESKDFLLTINAKPY 491

Query: 491 FTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT 550
           F  PL D  +D  +D+TW CE    P  +Y W++N  L+ S T  +E      I  NVL 
Sbjct: 492 FIYPLKDLIVDENSDITWRCEGIASPRASYVWYKNARLITSGTDGIE------IYSNVLK 545

Query: 551 IRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC 610
           I+ L       MY C A N   +  SSAQL+VL+ KPSF K PL     A   GN+TI C
Sbjct: 546 IKNLQKRIHDGMYSCEATNIHGSSVSSAQLKVLSFKPSFAKNPLPRTILAANNGNLTIPC 605

Query: 611 NPEAAPKPKFVWKKDGNII------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            PEAAP P   W K+G  +      G+    ++  NG L I  VS  D+G+Y+C A N +
Sbjct: 606 MPEAAPVPMISWLKNGGKLSLPITDGNQKGAQLLSNGYLKIVGVSMVDAGLYTCVAANQN 665

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVAYIWTHNGVRIG 723
           G   S G + V+ G +   QL P++ +  +  + + C    +   +D+  +W  NG  I 
Sbjct: 666 GESMSTGNVTVVGGVTIVTQLFPEMRVNKNDTVFIECQVSYDIFRVDLVLVWKFNGRIID 725

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
              D    ++  + I G  +   +  +  +G YECV  ST+ + S  T VIV+GPPG+PG
Sbjct: 726 FTQDFFYEKSTRMGISGLFIHFID--YYHSGVYECVAMSTITQSSISTNVIVQGPPGMPG 783

Query: 783 GVQVVEVHKT--SATIQWTDGATNGRPITHYKIIARTNWNSTW----FNVSEHVIGKEVD 836
            V  ++  +T  S TI+WT+   +G  I  Y I ART  N  W     N+S+  +    +
Sbjct: 784 NVYRIKGSETTRSVTIKWTEPPDHGSQIQQYNIEARTMDNPKWRPVATNLSDFNVLIPGN 843

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNEL-GYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
             + +++ ++   LVP+++Y+F+V+A N     GE S PS       D P  +   +GGG
Sbjct: 844 LDSDKRQYTVTG-LVPFNSYQFRVVARNRFPQLGEYSKPSEYIQLKPDVPVVSVQNVGGG 902

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEY---------GNVG 945
           GG  G L+ISW  L  E++  PNI Y ++WRK   T EFQ +TL E          GN  
Sbjct: 903 GGSEGVLTISWRLLAEEERCGPNIGYNVYWRKNGTTEEFQMKTLLETDHMFQKMVSGNSV 962

Query: 946 IAVVRIPSE-FYYTEYEVKVQAINDVGPGPES 976
              V + S+  +Y  YEVK+   N  G GP S
Sbjct: 963 SYTVNLNSDKLFYLPYEVKIGVFNKYGRGPNS 994



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 193/893 (21%), Positives = 326/893 (36%), Gaps = 152/893 (17%)

Query: 175  QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGY-PNPSYEWFKEDY 233
            ++G     P KI  G   + Q  +V   +++ ++     L+C    + P  SY+W K   
Sbjct: 268  KFGSVRSAPSKITFGS--LAQFPNVAPGVNRVALYQGTYLNCNPPTHKPAVSYQWMKG-- 323

Query: 234  VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKF--GSIISE----- 286
                  + LI  L+   F  + GNL  ++ +Q  D G+YHC  + K   G  ++      
Sbjct: 324  -----TSFLIQALNSYFFLSADGNLYFSEVQQ-NDEGNYHCIVTLKAFPGDTLATDQPPT 377

Query: 287  --SVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPT------------NYPGVNYYWAR 332
              S+ +    +G+      P+I +     A+F   P                 + Y W++
Sbjct: 378  ETSLDIKLDVLGDTAALYPPQIHDD--FPAVFPKSPRLGQKITIECLAYGRTPLRYRWSK 435

Query: 333  DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN-------GPFFP 385
                N     K    ++D  L    ++  D G Y+C+VQ +     ++        P+F 
Sbjct: 436  SGNGNL--PSKAYTQNFDRVLVIPNVQFTDEGTYTCHVQGRTQTESKDFLLTINAKPYF- 492

Query: 386  LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA- 444
              ++P    + L    N              +   C     P  SY W +    +     
Sbjct: 493  --IYP---LKDLIVDEN------------SDITWRCEGIASPRASYVWYKNARLITSGTD 535

Query: 445  YFENFNRILTIPNV--KVEDQGEYICRASNDRSALESSVTISIQA-EPNFT---IPLTDK 498
              E ++ +L I N+  ++ D G Y C A+N   +  SS  + + + +P+F    +P T  
Sbjct: 536  GIEIYSNVLKIKNLQKRIHD-GMYSCEATNIHGSSVSSAQLKVLSFKPSFAKNPLPRTIL 594

Query: 499  HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN--- 555
              +N  +LT  C     P    SW +NG  L   +LP+ D ++   Q  +L+  YL    
Sbjct: 595  AANN-GNLTIPCMPEAAPVPMISWLKNGGKL---SLPITDGNQKGAQ--LLSNGYLKIVG 648

Query: 556  -PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
                D  +Y C A NQ     S+  + V+       +  L  E    +   V I C    
Sbjct: 649  VSMVDAGLYTCVAANQNGESMSTGNVTVVGGVTIVTQ--LFPEMRVNKNDTVFIECQVSY 706

Query: 615  ---APKPKFVWKKDGNIIG--------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
                     VWK +G II            R  I     L I  +    SG+Y C A + 
Sbjct: 707  DIFRVDLVLVWKFNGRIIDFTQDFFYEKSTRMGI---SGLFIHFIDYYHSGVYECVAMST 763

Query: 664  HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH---NGV 720
                     +IV        Q PP +    +R         +E    V   WT    +G 
Sbjct: 764  ITQSSISTNVIV--------QGPPGMPGNVYR------IKGSETTRSVTIKWTEPPDHGS 809

Query: 721  RIGNM--------------------DLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
            +I                       D N L   N++ D     +T     ++ ++  V +
Sbjct: 810  QIQQYNIEARTMDNPKWRPVATNLSDFNVLIPGNLDSDKRQYTVTGLVPFNSYQFRVVAR 869

Query: 761  STVGKIS--TKTTVIVEGPPGLPG-GVQVVEVHKTS---ATIQWTDGATNGR--PITHYK 812
            +   ++   +K +  ++  P +P   VQ V     S    TI W   A   R  P   Y 
Sbjct: 870  NRFPQLGEYSKPSEYIQLKPDVPVVSVQNVGGGGGSEGVLTISWRLLAEEERCGPNIGYN 929

Query: 813  IIARTNWNSTWFNV-----SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
            +  R N  +  F +     ++H+  K V   +     ++ +  + +  YE K+   N+ G
Sbjct: 930  VYWRKNGTTEEFQMKTLLETDHMFQKMVSGNSVSYTVNLNSDKLFYLPYEVKIGVFNKYG 989

Query: 868  YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY--YKIFW 925
             G P+S S    +    P   P+ + G       L ++W+PLP  +     +   ++I  
Sbjct: 990  RG-PNSTSTVVYSSEGIPLLRPTNVNGWEINSTALWVTWDPLPNTRDAIKGVIQGFEINV 1048

Query: 926  RKKNDTEFQSETLKEYGNV-GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
               ND   +S T   YG + G  V+ +      T+Y V VQ  N  G    SE
Sbjct: 1049 EDANDANRKSVTAYHYGYMEGNNVIGLEPN---TDYWVTVQIFNTAGESNPSE 1098


>gi|405963886|gb|EKC29418.1| Protein roadkill [Crassostrea gigas]
          Length = 1991

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 323/1004 (32%), Positives = 484/1004 (48%), Gaps = 72/1004 (7%)

Query: 29   CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
            CP  W    + CY+FV  P  +   A+  C  L + L +V   DE+ FI   L   D  R
Sbjct: 333  CPTDWFTSSNVCYKFVFDPKASYEKAREQCSVLGTSLLSVQSRDENNFIDGWLRNNDYFR 392

Query: 89   RKWYFGG--TQQSPNLWV-NEDGTNLNEL--DAAF-LPEPADNV-----QRDYLAYSFSQ 137
              W   G  ++++P+++  + D  N N +  D  F LP    ++     Q D + Y F  
Sbjct: 393  NTWLTTGQRSRENPSMYAWDGDFANDNRIPQDMQFWLPNDQTHLSPTARQEDVIVYKFDG 452

Query: 138  SLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT 197
                +G+   + ++ + +ICE S  + + L  D R + YG+     DK+ +GP F  QP 
Sbjct: 453  V--SYGWTIGSKLDEMSYICEISQTEAYKLTLDKRGFDYGIPYTQLDKVKKGPKFELQPV 510

Query: 198  DVVFDLSKRSILNDITLSCYAGGYPNPSYEW--FKEDYVQDRLVAN--LIDPLSDKRFTL 253
            D+   +  R++   +T+   A GYP PSYEW  F+        +AN   I    + R+TL
Sbjct: 511  DLA--VISRALF--VTIETVAVGYPQPSYEWKRFRGSNTTINSLANAETITSTLNSRYTL 566

Query: 254  SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWG 312
            + G   I +P +  D G Y C   N+ G+I+S  ++++FGF+GEF N+K A     +  G
Sbjct: 567  TNGKFTIENPDENMDAGVYQCLVKNEIGAILSNPIKISFGFLGEFSNVKDADVNAPEYEG 626

Query: 313  KAMFCDPPTNYPGVNYYWARDY----FPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
              M C      P V Y W RD      P        VF+SY+G LYFS + ++D  NY C
Sbjct: 627  AVMQCSNIAYKPAVVYNWMRDMKGEPRPIIKTMTPYVFMSYNGNLYFSEVGKVDDNNYYC 686

Query: 369  NVQSKVSDTGRN--------GPFFPLKVFPHSNFQQLKF----PNNFPKTFPEAPKAGDK 416
             V S  S T RN            P+K+   +   + ++     ++F   FP+ P  G  
Sbjct: 687  QV-SLTSLTTRNVGDIQSGSKTSLPIKLNVLAQAPKTEWGPDIQDDFINVFPKPPLKGHN 745

Query: 417  VRLECVAFG-----YPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRAS 471
            VR+EC A+G       +  Y WTR G P+P NA   +FNR+L I N ++EDQG Y+C   
Sbjct: 746  VRMECFAYGSANNYVEMWRYTWTREGRPMPENAEMADFNRVLLIKNARLEDQGNYVCHVK 805

Query: 472  NDRSALESS-VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
                A +S  + + ++A P F IPL D+H+D  + LTW CEA G P   Y+WF+NGE+L 
Sbjct: 806  RGNKARDSKMIALRLEAVPYFIIPLEDQHVDKGSQLTWRCEAMGYPQPVYTWFKNGEILQ 865

Query: 531  SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
                         I  N+LTI  L  E+   MYQC A N   T  S+ QLRVL   P+ +
Sbjct: 866  ENV-----NSDLVITGNILTIPNL-AEKHNGMYQCAATNVHGTAMSAGQLRVLYFSPTLQ 919

Query: 591  KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVS 649
            K P++S       G + I C PEAAP P   W K+  +I   G R K+  NGNL I  ++
Sbjct: 920  KYPVQSHMVGALNGEIIIMCKPEAAPAPTITWTKNSISISPDGNRIKLMPNGNLQIKDLT 979

Query: 650  RDDSGIYSCTATN-VHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEE 707
              D+G Y+C A N +    +S G+L++         +PP    +  +R   + C A  + 
Sbjct: 980  YGDAGFYTCIADNGIPPAAKSTGQLVIQSATVI--TIPPYTDPVVVNRTTFIPCKASYDI 1037

Query: 708  LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
             LD+ Y+WT NG ++ + +       + N     L I    F  AG YEC+ K+T+ + +
Sbjct: 1038 NLDLVYMWTFNG-KLIDFEKEFHYRLDTNPSHSGLNIIMTQFKHAGVYECIAKTTLNQEA 1096

Query: 768  TKTTVIVEGPPGLPGGVQVVEVHKT--SATIQWTDGATNGRPITHYKIIARTNWNSTWFN 825
              T ++V GPPG P GV  V+   T  S  + +  GA +G  ++H+ +     +   W  
Sbjct: 1097 KSTPLVVYGPPGEPAGVVGVDGSATHNSILLAFFPGAEHGSRVSHFIVEREIEYEPGWKL 1156

Query: 826  VSEH------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
            +S++      V+     +    ++  IE  L P + Y F++   N+ G G  S PSP   
Sbjct: 1157 ISQNYPEPFTVVQGTGGQNKDMRQIKIEEDLHPGNGYRFRIAGVNQYGVGTWSVPSPFIE 1216

Query: 880  TPADKPYQA--PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-----DTE 932
            T    P  A     I GG G +GDLSI W  + +E   AP   Y ++WR+       D  
Sbjct: 1217 TKPAAPDVAVDSEYIVGGNGSVGDLSILWNRMDQEFHGAPGFGYIVYWRRYKPSSVYDAL 1276

Query: 933  FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            ++ E   E        V++  E YY EYE+K+Q  N +G GP S
Sbjct: 1277 WRKEGPFEDWTKDRLTVQVGEENYYLEYEIKIQVYNVMGKGPNS 1320


>gi|443687293|gb|ELT90327.1| hypothetical protein CAPTEDRAFT_180331 [Capitella teleta]
          Length = 1108

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 312/885 (35%), Positives = 451/885 (50%), Gaps = 49/885 (5%)

Query: 130 YLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDK--IP 187
           +  Y+F      WG+   TGME   ++CE S + ++ +  +DR       ++NPD+  I 
Sbjct: 2   WCKYTFCLEGYEWGWILGTGMEKSPYVCEISKEDIYKISQEDRGPGEFTRLDNPDEETIE 61

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           RGP  ++QP DVV++   + +    ++ C    YP   + W +E    D++    IDP +
Sbjct: 62  RGPKMLEQPKDVVYE--PKDVNKFTSIICTVDAYPEAEFSWTRER-AGDKVE---IDPNT 115

Query: 248 DKRFTLSGGNLIINDPR-QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF-NLKRAPE 305
           + R+T+  G LII++P    ED G Y C A+NKFGSI S ++ L FG++ +F    RAP 
Sbjct: 116 EPRYTMINGVLIIHEPAADEEDDGKYQCTATNKFGSIFSNTIALDFGYLQDFPKSPRAPV 175

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR--VFVSYDGALYFSALEQIDA 363
                   ++ C PP +YP V Y W +D   NF+  + +  +F+S DG LYFS +   D 
Sbjct: 176 SAIAYQWASVECSPPAHYPEVLYTWYKDDIYNFIRPELKPYIFISNDGRLYFSEITADDV 235

Query: 364 GNYSCNVQSKVSDTGRNGPFFP--LKVFPHS-NFQQLKFPNNFPKTFPEAPKAGDKVRLE 420
           G Y C +              P  +KV   S    + +  + FP  +P +P  GD VRLE
Sbjct: 236 GAYYCLIYKPGQALAEGKVSMPTEVKVVEGSPGIYEPEIGSGFPLVYPSSPMIGDNVRLE 295

Query: 421 CVAFG---YPVPSYNWTR---------RGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
           C A G   Y    Y W +         R  PLP  A   +  R+L I ++++ D+G Y C
Sbjct: 296 CWASGTSRYDDLIYTWDKVEMVDGKPHRELPLPNQARLTDHMRVLLIDDIQLYDEGTYRC 355

Query: 469 RASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
                     S +V + +Q +P FT+ L D+  D   DLTW C+A G P   Y W +N E
Sbjct: 356 NVRRLHGQSHSETVDLILQGKPYFTLNLKDQFADIGTDLTWRCQAGGNPSPQYHWLKNTE 415

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
           +L+++T+P ED+ R  + +NVL IR L+PERD  MYQC+A N L T YS+ +LRVL+  P
Sbjct: 416 ILSNDTIPEEDRGRIIVNNNVLIIRNLDPERDNGMYQCQATNMLGTEYSTGELRVLSFAP 475

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKP---KFVWKKDGNII----GSGGRRKIFEN 640
           +FKK  ++   +A   GN T++C PEAAP P   + +W K+G  +    G   R +   N
Sbjct: 476 NFKKYLMQPNQFATALGNTTLYCRPEAAPYPSAEEIIWYKNGVPLNPGSGENDRVQQLPN 535

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQL 699
           GN+ IS V + D G+Y C  +N +G  E+ G L VL   +     PP  T I  +R   L
Sbjct: 536 GNVFISNVQQSDQGVYKCHVSNSYGEAETVGNLTVLSKSTTTLTQPPLDTNIQVNRTNFL 595

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 759
            C A    +LDV Y+W H     G+M L E E       GGL  I  A F   G Y C V
Sbjct: 596 SCMASYNPVLDVTYVWYH-----GDM-LVEFEKVFRLYVGGLY-IMKAQFEHQGRYTCRV 648

Query: 760 KSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIART 817
            S+ G  +   TV + GPP  P GV  Q   V  +S  +QW    T  RPI  Y I    
Sbjct: 649 HSSSGMTAASATVQILGPPSEPAGVFIQSATVTTSSVVVQWKASGTTTRPIISYVIEGYN 708

Query: 818 NWNSTW--FNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSS 873
            W   W     SE +   ++      +E    NV  L P+STY+ ++ A N  G   PS+
Sbjct: 709 FWEGFWRILFTSEFISALDMQLDEDERETMHFNVTDLRPYSTYQLRIRAENSYGTSIPST 768

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
           PS ++ T A KP +AP  +GGGGG++GDL+I+W+PL   + N P I Y++  + + D E+
Sbjct: 769 PSQEFTTWAVKPDRAPEEVGGGGGRVGDLTITWKPLEEWEYNGPGIGYRVRRKNRGDDEW 828

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                   G++   V  +    +Y EYEV  QA ND G GP S +
Sbjct: 829 DKTFDIPGGDISRYVDLVGEPNFYREYEVTAQAYNDQGFGPVSPI 873


>gi|327266140|ref|XP_003217864.1| PREDICTED: contactin-4-like [Anolis carolinensis]
          Length = 1020

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 278/801 (34%), Positives = 413/801 (51%), Gaps = 33/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D I RGP FI++P+ VVF L   S    + LSC   G P P+  W        +L   ++
Sbjct: 11  DNILRGPVFIQEPSSVVFALD--SDEKKVKLSCEVKGNPKPTIRW--------KLNGTIV 60

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++ +F  +  
Sbjct: 61  DIGMDYRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLEKFKTRTR 120

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   Q  G  + C PP +   + Y W  + +P+FV +D R FVS + G LY + +E+ 
Sbjct: 121 STVSVRQGQGMVLLCGPPPHSGELIYAWIFNEYPSFVHQDNRRFVSQETGNLYIAKVEKS 180

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+  P A   G  VRL
Sbjct: 181 DVGNYTCVVTNSVTNNRVLGPTTPLILRNDGVMGEYEPKIEVQFPEMVPSA--KGTTVRL 238

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+ +W R  G  +P+ A     + IL IPN + ED G Y C A N R    
Sbjct: 239 ECFALGNPVPAISWRRADGKQIPKKARRHKSSSILEIPNFQQEDAGLYECVAENVRGRNV 298

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A PN+T  + D H+  + ++ W C+A G P  +YSW ++GELL    LP   
Sbjct: 299 ARGQLTFYAPPNWTQRINDAHVAIEENIYWECKANGRPKPSYSWLKDGELL----LP--- 351

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           Q+R  I+   LTI  ++   D  MYQC A+N+    Y SA+L V+ + P F K  L+  T
Sbjct: 352 QERIQIEHGTLTITNVSLS-DTGMYQCVAENRYGAIYISAELSVIAVGPDFSKNYLKRLT 410

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG+ TI C P+A+P+P F WKK   I+    R  I E+G L I  V++ D+G Y+C
Sbjct: 411 LVKVGGDATIECKPKASPRPTFTWKKGKEILRENERYTIMEDGTLKIINVTKADAGSYTC 470

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G+  S G L V+  P+ +   P  + + A  ++ L C    +  LD+ + W+ N
Sbjct: 471 IATNHFGVASSTGNL-VIKDPTRFMVAPTSMDVTAGESILLPCQVSHDHPLDIMFTWSFN 529

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I    D +  E        G L I +     AG+Y C+V+++V K+S    +IV GP
Sbjct: 530 GHLIDFERDGDHFERVGGQDSAGDLMIRSIQLNHAGKYVCMVQTSVDKLSAAADLIVRGP 589

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  PIT Y + ART ++  W  V  + + + +D 
Sbjct: 590 PGPPEAVTIDEITDTTAQVSWRPGPDNRSPITTYVVQARTPFSVGWQAV--NTVPEVID- 646

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G    +    L PW  YEF+V+A + +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 647 --GNTFTATVVGLNPWVEYEFRVVAASLIGIGEPSKPSEKRRTEEALPEVTPANVSGGGG 704

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +  +T+    +    V R  S   +
Sbjct: 705 TKSELVITWETVPEELQNGGGFGYVVAFRPVGTISWM-QTVVASPDASKYVFRNESLPPF 763

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + YEVKV   N+ G GP S V
Sbjct: 764 SPYEVKVGVYNNRGEGPFSHV 784



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 153/647 (23%), Positives = 241/647 (37%), Gaps = 65/647 (10%)

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-GDK 416
            +Q DAG Y C  ++     GRN     L  +          P N+ +   +A  A  + 
Sbjct: 278 FQQEDAGLYECVAENV---RGRNVARGQLTFYA---------PPNWTQRINDAHVAIEEN 325

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +  EC A G P PSY+W + G  L      +  +  LTI NV + D G Y C A N   A
Sbjct: 326 IYWECKANGRPKPSYSWLKDGELLLPQERIQIEHGTLTITNVSLSDTGMYQCVAENRYGA 385

Query: 477 LESSVTISIQA-EPNFTIPLTDKH--MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSET 533
           +  S  +S+ A  P+F+     +   +    D T  C+    P  T++W +  E+L    
Sbjct: 386 IYISAELSVIAVGPDFSKNYLKRLTLVKVGGDATIECKPKASPRPTFTWKKGKEIL---- 441

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
               + +RY I ++  T++ +N  + D   Y C A N      S+  L V+     F   
Sbjct: 442 ---RENERYTIMEDG-TLKIINVTKADAGSYTCIATNHFGVASSTGNL-VIKDPTRFMVA 496

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-------GNLLI 645
           P   +  AGE   +    + +      F W  +G++I        FE        G+L+I
Sbjct: 497 PTSMDVTAGESILLPCQVSHDHPLDIMFTWSFNGHLIDFERDGDHFERVGGQDSAGDLMI 556

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             +  + +G Y C          +   LIV   P   E +           +  R     
Sbjct: 557 RSIQLNHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQVSWRPGPDN 616

Query: 706 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTV 763
              +    +       +G   +N +  P + IDG     T        EYE   V  S +
Sbjct: 617 RSPITTYVVQARTPFSVGWQAVNTV--PEV-IDGNTFTATVVGLNPWVEYEFRVVAASLI 673

Query: 764 G-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATNGRPITHY 811
           G     K S K       P   P  V      K+   I W        +G   G  +  +
Sbjct: 674 GIGEPSKPSEKRRTEEALPEVTPANVSGGGGTKSELVITWETVPEELQNGGGFGY-VVAF 732

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
           + +   +W  T       V   +  +Y  R E+     L P+S YE KV   N  G G  
Sbjct: 733 RPVGTISWMQT------VVASPDASKYVFRNES-----LPPFSPYEVKVGVYNNRGEGPF 781

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S  +  Y+   ++P +AP+ I        ++ + W  LP  +       Y++ + +  D 
Sbjct: 782 SHVTVVYSA-DEEPNKAPTSIFARSMSASEVEVFWSMLPETQSKGRIQGYEVRYWQHGDK 840

Query: 932 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           E Q+  +K   N   A  RI +      Y + V+A N  G GP S V
Sbjct: 841 EEQAGRMKTMTNQTFA--RISNLKGNALYHLAVKAYNTAGMGPSSAV 885


>gi|326928158|ref|XP_003210248.1| PREDICTED: contactin-4-like [Meleagris gallopavo]
          Length = 1063

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 277/821 (33%), Positives = 411/821 (50%), Gaps = 34/821 (4%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPN 223
           L ++ ++     YG   E  + +  GP F+++P+ V+F L        + L+C   G P 
Sbjct: 35  LAFVFDEPAVVMYG---EKNNNMLHGPVFLQEPSSVIFPLDSEE--KKVKLNCEVKGNPQ 89

Query: 224 PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSI 283
           P+  W        +L    ID   D R++   GNL+IN+P + +D G+Y C A+N FG I
Sbjct: 90  PTIGW--------KLNGTNIDIGMDYRYSTVEGNLLINNPNKTQDTGTYQCVATNPFGRI 141

Query: 284 ISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED 342
           +S   +L F ++  F  + R+     Q  G  + C PP +   + Y W  + +P+FV +D
Sbjct: 142 VSREAKLQFAYLENFKTRVRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPSFVHQD 201

Query: 343 KRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KF 399
            R FVS + G LY + +E  D GNY+C V + V+++   GP  PL +       +   K 
Sbjct: 202 NRRFVSQETGNLYIAKVEASDVGNYTCVVTNTVTNSRVLGPPTPLILRNDGVMGEYEPKI 261

Query: 400 PNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNV 458
              FP+T P A   G  V+LEC A G PVP+ +W R  G  +PR A     N +L IPN 
Sbjct: 262 EVQFPETVPSA--KGTAVKLECFALGNPVPTISWRRADGKQIPRKARRHRSNGLLEIPNF 319

Query: 459 KVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDV 518
           + ED G Y C A N R    +   ++  A+PN+   ++D H   + ++ W C A G P  
Sbjct: 320 QQEDAGLYECVAENVRGKNVARGQLTFYAQPNWIQKISDVHAAIEENVFWECHASGRPKP 379

Query: 519 TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 578
           +Y W ++GE       PL  Q R  I+   LTIR ++   D  MYQC A+N+  T ++SA
Sbjct: 380 SYRWLKDGE-------PLLPQGRVQIEQGSLTIRNVSLS-DAGMYQCVAENRHGTIFASA 431

Query: 579 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 638
           +L V+ + P F K  L+  T    GG V I C P+A+P+P + WKK  +I+    R  + 
Sbjct: 432 ELSVIAVGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPAYSWKKGKDILRENERITVL 491

Query: 639 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
           ++G+L I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    ++ 
Sbjct: 492 DDGSLRIVNVTKSDTGSYTCVATNHFGTASSTGSLVV-KDPTRVMVSPFSMDVTVGESIV 550

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
           L C    +  LD+ + W+ NG  I    D +  E        G L I +     AG+Y C
Sbjct: 551 LPCQVSHDHSLDIVFTWSFNGHLIDFEKDGDHFEKVGGQDSAGDLMIRSIQLKHAGKYVC 610

Query: 758 VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 817
           +V+++V KIS    +IV GPPG P  V + E+  T+A + W  GA N  PIT Y + ART
Sbjct: 611 MVQTSVDKISAAADLIVRGPPGPPEDVTIDEITDTTAQLSWRPGADNHSPITMYVVQART 670

Query: 818 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
            ++  W  VS      EV    GR   +    L PW  YEF+V+A N +G GEPS PS  
Sbjct: 671 PFSVGWQAVSTV---PEVIXIDGRTFTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSEN 727

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 937
             T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  +T
Sbjct: 728 RRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPFGTISWM-QT 786

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +    +    V R  S   ++ YEVKV   N+ G G  S V
Sbjct: 787 VVASPDASRYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPV 827



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 157/657 (23%), Positives = 239/657 (36%), Gaps = 67/657 (10%)

Query: 350 DGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKF---PNNF 403
           +G L     +Q DAG Y C   NV+ K    G                 QL F   PN  
Sbjct: 311 NGLLEIPNFQQEDAGLYECVAENVRGKNVARG-----------------QLTFYAQPNWI 353

Query: 404 PKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQ 463
            K         + V  EC A G P PSY W + G PL      +     LTI NV + D 
Sbjct: 354 QKISDVHAAIEENVFWECHASGRPKPSYRWLKDGEPLLPQGRVQIEQGSLTIRNVSLSDA 413

Query: 464 GEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKH--MDNQADLTWTCEAFGVPDVTY 520
           G Y C A N    + +S  +S+ A  P+F+  L  K   +    ++   C+    P   Y
Sbjct: 414 GMYQCVAENRHGTIFASAELSVIAVGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPAY 473

Query: 521 SWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQ 579
           SW +  ++L        + +R  + D+  ++R +N  + D   Y C A N   T  S+  
Sbjct: 474 SWKKGKDIL-------RENERITVLDDG-SLRIVNVTKSDTGSYTCVATNHFGTASSTGS 525

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE 639
           L V+         P   +   GE   +    + + +    F W  +G++I        FE
Sbjct: 526 L-VVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFEKDGDHFE 584

Query: 640 N-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
                   G+L+I  +    +G Y C          +   LIV   P   E +       
Sbjct: 585 KVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISAAADLIVRGPPGPPEDVTIDEITD 644

Query: 693 AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 752
               L  R  A     + +  +       +G   ++ +    I IDG     T       
Sbjct: 645 TTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEV-IXIDGRTFTATVVGLNPW 703

Query: 753 GEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGA 802
            EYE   V  + +G     + S         P   P  V      K+   I W    +  
Sbjct: 704 VEYEFRVVAANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSELVITWETVPEEL 763

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            NG     Y +  R     +W      V   +  RY  R E+     L P+S YE KV  
Sbjct: 764 QNGGGF-GYVVAFRPFGTISWMQTV--VASPDASRYVFRNES-----LPPFSPYEVKVGV 815

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY-Y 921
            N  G G   SP     +  ++P +AP  +        D+ ISW P PRE Q+   I  Y
Sbjct: 816 YNNKGEGS-FSPVTVVYSAEEEPTRAPITVLARSLSATDIEISWAP-PRENQHKGRIQGY 873

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++   + ++ E  +  ++  GN   A  ++ +      Y + V+A N  G GP S +
Sbjct: 874 EVRCWRHDEKEETARKIRTVGNQTSA--KVTNLQGNALYHLAVKAYNTAGTGPSSAM 928


>gi|410920627|ref|XP_003973785.1| PREDICTED: contactin-3-like [Takifugu rubripes]
          Length = 1027

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 273/802 (34%), Positives = 403/802 (50%), Gaps = 35/802 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D I +GP +  +P+D++  ++        T++C A G P P Y W         L   +I
Sbjct: 23  DVIFQGPRWKTEPSDLILSINTPD--QRATITCEAEGSPPPQYRW--------SLNGTVI 72

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-- 301
           DP +D R  +SGG+LII+D  + +D G Y C A N +G+++S    L F ++  F  +  
Sbjct: 73  DPGNDYRRHMSGGSLIISDLDKDQDTGVYQCTAVNTWGAVLSRRASLRFAYLDNFKSQAD 132

Query: 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQ 360
           R+     +  G  + C PP N   + Y W  + +P+FV++D R F+S + G LY + +E+
Sbjct: 133 RSAVHVREGQGVVLLCGPPVNSGELTYAWIFNEYPHFVQQDSRRFISQETGNLYVAKVER 192

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVR 418
            D GNY+C V + V+         PL +       +   K   +FP++ P A ++   VR
Sbjct: 193 SDVGNYTCVVNNTVTGDKVLSSPTPLVLRTDGVMGEYEPKIEVHFPESVPAAKESA--VR 250

Query: 419 LECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC A G PVP  +W R  G P P     +N N +L IPN + ED G Y C A N R   
Sbjct: 251 LECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPNFQQEDAGTYECVAENWRGKN 310

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
            +   +S  A+P++ + + D  +  +A+L W C+A G P  +YSW +NGE L +E     
Sbjct: 311 AARGRLSFHAKPHWLLTMADTALSVEANLFWECKANGKPKPSYSWLKNGEQLAAE----- 365

Query: 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE 597
              R  I++  L+I  LN   D  MYQC A+N+    YSSAQL VL   PSF K PL++ 
Sbjct: 366 --GRIQIENGALSIAALN-LSDSGMYQCVAENKHGVIYSSAQLMVLASPPSFSKSPLKAL 422

Query: 598 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
             A  G  VT+ C PEA P    +WKK   I+    R  +  NG L I+  +R D+G Y+
Sbjct: 423 LKARTGSEVTLECKPEAWPPAISLWKKGNEILQRAERMTLLPNGTLRIANATRQDAGSYT 482

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N  G   + G+L++   P+     P    I    +  L C   ++  LDV++ W  
Sbjct: 483 CVAKNQFGTASTTGKLLITE-PTRITMRPTNTEIIVGESAVLPCQIASDPALDVSFSWAF 541

Query: 718 NGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           NG  I    D N  E    ++ G L+ I N   +  G+Y C++ + V  +ST   ++V+G
Sbjct: 542 NGQLIDFQRDGNHFERVGGSVSGDLM-IRNIQLSHGGKYVCLIDTDVESLSTSAILVVKG 600

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
           PPG P  V V E+  ++A + WT G  NG PIT Y I ART +   W       +    +
Sbjct: 601 PPGPPDKVTVEEITDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGW-----QAVDTVPE 655

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
              G    +    L  W  YEF+V+A N +G GEPS  S +  T    P  AP+ +GGGG
Sbjct: 656 VINGNLLTATVVGLNAWVEYEFRVVARNTVGLGEPSPASTKTRTEDSIPDTAPTDVGGGG 715

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
           G   +L I+WEP+P E QN     Y I +R      +    +   G +G  V R  +   
Sbjct: 716 GTKSELVITWEPVPEELQNGDGFGYIIAFRPLGLVTWTRAAISTPG-IGRYVFRNDTIPA 774

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
           ++ +EVKV A N+ G GP S +
Sbjct: 775 FSPFEVKVGAYNNRGEGPFSSI 796



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 227/595 (38%), Gaps = 81/595 (13%)

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G P PSY+W + G  L      +  N  L+I  + + D G Y C A N    + S
Sbjct: 342 ECKANGKPKPSYSWLKNGEQLAAEGRIQIENGALSIAALNLSDSGMYQCVAENKHGVIYS 401

Query: 480 SVTISIQAEP-NFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           S  + + A P +F+       +  +  +++T  C+    P     W +  E+L       
Sbjct: 402 SAQLMVLASPPSFSKSPLKALLKARTGSEVTLECKPEAWPPAISLWKKGNEIL------- 454

Query: 537 EDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           +  +R  +  N  T+R  N  R D   Y C AKNQ  T  ++ +L ++T       RP  
Sbjct: 455 QRAERMTLLPNG-TLRIANATRQDAGSYTCVAKNQFGTASTTGKL-LITEPTRITMRPTN 512

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE------NGNLLISPVS 649
           +E   GE   +      + A    F W  +G +I        FE      +G+L+I  + 
Sbjct: 513 TEIIVGESAVLPCQIASDPALDVSFSWAFNGQLIDFQRDGNHFERVGGSVSGDLMIRNIQ 572

Query: 650 RDDSGIYSCTA-TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
               G Y C   T+V  +  S   ++V+ GP      P K+T+              EE+
Sbjct: 573 LSHGGKYVCLIDTDVESLSTSA--ILVVKGPP---GPPDKVTV--------------EEI 613

Query: 709 LD--VAYIWT---HNGVRIG----------NMDLNELETPNINIDGGLLEITNASFADAG 753
            D      WT    NG  I            +    ++T    I+G LL  T        
Sbjct: 614 TDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVINGNLLTATVVGLNAWV 673

Query: 754 EYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGAT 803
           EYE   V ++TVG       STKT      P   P  V      K+   I W    +   
Sbjct: 674 EYEFRVVARNTVGLGEPSPASTKTRTEDSIPDTAPTDVGGGGGTKSELVITWEPVPEELQ 733

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           NG     Y I  R     TW   +    G  + RY  R +      +  +S +E KV A 
Sbjct: 734 NGDGF-GYIIAFRPLGLVTWTRAAISTPG--IGRYVFRND-----TIPAFSPFEVKVGAY 785

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N  G G  SS +  Y+   + P  AP R+         + + WE LP   +     Y  +
Sbjct: 786 NNRGEGPFSSIATVYSA-EEVPSVAPKRVRTRSVSAVQIEVIWEALPALPERVLG-YEVV 843

Query: 924 FWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +W    K DT  +      Y  V I  ++  + +Y     + V A N  GPGP+S
Sbjct: 844 YWEDDTKPDTVGKVRISGNYTVVNITGLKASTVYY-----LSVAAFNTAGPGPQS 893


>gi|405957294|gb|EKC23517.1| Contactin [Crassostrea gigas]
          Length = 1188

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 319/981 (32%), Positives = 487/981 (49%), Gaps = 97/981 (9%)

Query: 47  PLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106
           P +T  +A   C+   + L +VN  +E+ FI  +L   D  R  WY  GT Q  ++  N 
Sbjct: 3   PQRTYEEAVKTCEGYGAALVSVNTLEENNFITQRLKDIDFIRSLWYTSGTLQDGSVRWNG 62

Query: 107 DGTNLNELDAAFLPEPAD---NVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQK 163
           DGT L+   +  L   A    N++  ++ Y +S++L  +   +  G E   FICE    +
Sbjct: 63  DGT-LSTAGSVLLSNIAHTDPNIR--FIVYRYSENLFTYLLTKSGGDERFSFICEIKKTE 119

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPN 223
           L+ ++ D+R + YG +I +P K+ RGP F   P+++V  L+ RS L  I   C A G P 
Sbjct: 120 LNRIVQDERDFTYGSNITDPLKVERGPRFTVLPSNIV--LTTRSYLPSI--ECIATGNPQ 175

Query: 224 PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR--QVEDRGSYHCKASNKFG 281
           P Y+W ++    D  +       S+  +T+S G L  +  R  +  D G Y+C ASNKFG
Sbjct: 176 PKYQWQRKRPTMDVEILT-----SNNAYTISNGKLTFDSTRLNETRDAGEYYCVASNKFG 230

Query: 282 SIISESVQLAFGFIGEFNLKRAPEIGNQNW-GKAMFCDPPTNYPGVNYYWARDYFPNFVE 340
           S+ SE  +++FG + +F +     +    + G  + C+PP+  P + Y W ++       
Sbjct: 231 SVRSEPSRVSFGRLAQFPVVAPGPVNVALYQGTYLQCNPPSYKPNLKYQWMKENSFLLPV 290

Query: 341 EDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV--SDT-------GRNGPFFPLKVFPH 391
            +K  FVS  G LYFS ++  DA  Y C V       DT              PL+V   
Sbjct: 291 LNKHFFVSIGGNLYFSEVQSSDAAIYHCIVTLAALPGDTMATDQPPTETSMGMPLRVAGE 350

Query: 392 SNFQQ-LKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSP-LPRNAYFENF 449
           S      +   +FP  FP  P  G  V +EC+A+G     Y+W R G+  +P+ AY E++
Sbjct: 351 SASNYPAQIHTDFPAVFPRTPLLGMDVVIECLAYGRSPLDYSWIREGNKDIPKKAYTEDY 410

Query: 450 NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWT 509
           NR+L IPN++  D+G Y C      +  + S+ ++I A+P F  PL D  +D ++ +T  
Sbjct: 411 NRVLVIPNIQFGDEGTYTCNVKGRSNTDQKSLLLTIDAKPYFLYPLRDLVVDEESHVTLR 470

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
           C+A G P  T+SW++N + L    +P+  +    I  NVLTI                  
Sbjct: 471 CDALGKPRPTFSWYKNSQPL----VPVPGEIE--IVSNVLTI------------------ 506

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 629
            L+T+     LR     P+F K PL +   A E GN+TI C PEAAP P+  W K+G  +
Sbjct: 507 -LRTQVGKHALR-----PTFIKYPLPTTLLAAESGNLTIPCQPEAAPAPEITWVKNGAQM 560

Query: 630 ------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
                 G+    ++  NG L I  VS  D G Y+C A N+HG  ++   +IV  G  Y  
Sbjct: 561 SLSFTNGNQNGVQMLLNGYLKIVGVSLGDGGFYTCHAKNIHGDAQTTTNVIVSKG-VYMA 619

Query: 684 QLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL- 741
            +P +  +  +  + ++C A +    LD+ Y+W  NG  I   D            GGL 
Sbjct: 620 PIPREYNVDRNGTVFIQCQASYDASNLDLVYVWKFNGELI---DFGRDTLLRKGASGGLN 676

Query: 742 -LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT--SATIQW 798
            L I  A +  AG YEC+ ++T+ + S  T VIV GPPG+PG V  V+  +T  S T++W
Sbjct: 677 GLFINYADYFHAGLYECIAQTTITQTSVATNVIVRGPPGMPGFVYRVKGSETPHSVTLKW 736

Query: 799 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS----IENVLVPWS 854
           T    +G  +  Y I A+T  N+TW  +S+  + +      G  EA     I + L+P++
Sbjct: 737 TRAPDHGSQVQFYYIEAQTILNTTWRLMSK--VSEMQTLLPGPNEADKRQFIVSGLIPYN 794

Query: 855 TYEFKVIAGNE-LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
            Y F+V A N  L  GE S P+ + + P  KP  AP+ +GGGGG +G L+I+W  L +E 
Sbjct: 795 NYRFRVYASNAYLDPGEISRPTEEIHIPGAKPIMAPTNVGGGGGSVGVLTITWRMLSKEL 854

Query: 914 QNAPNIYYKIFWRK----KNDTEFQSETLKEY-----------GNVGIAVVRIPS-EFYY 957
           Q+ PN+ Y ++WR+    + + EFQS+TL E            G  G   V +PS + YY
Sbjct: 855 QSGPNVKYYVYWRRSRNGETNLEFQSKTLLESNKLLIQTNRTDGTYGTYTVPLPSDDLYY 914

Query: 958 TEYEVKVQAINDVGPGPESEV 978
             ++V V   N  G GP S +
Sbjct: 915 LPFDVMVGVGNAFGRGPNSSI 935


>gi|118097058|ref|XP_414435.2| PREDICTED: contactin-4 [Gallus gallus]
          Length = 1029

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 272/801 (33%), Positives = 406/801 (50%), Gaps = 33/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D +  GP F+++P+ V+F L        + L+C   G P P+  W        +L    I
Sbjct: 20  DNMLHGPVFLQEPSSVIFPLDSEE--KKVKLNCEVKGNPRPTIGW--------KLNGTNI 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-R 302
           D   D R+++  GNL+IN+P + +D G+Y C A+N FG IIS   +L F ++  F  + R
Sbjct: 70  DIGMDYRYSMVEGNLLINNPNRTQDTGTYQCVATNPFGRIISREAKLQFAYLENFKTRVR 129

Query: 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
           +     Q  G  + C PP +   + Y W  + +P+FV +D R FVS + G LY + +E  
Sbjct: 130 STVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPSFVHQDNRRFVSQETGNLYIAKVEAS 189

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V+++   GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 190 DVGNYTCVVTNTVTNSRVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPSA--KGTAVKL 247

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+ +W R  G  +PR A     N +L IPN + ED G Y C A N R    
Sbjct: 248 ECFALGNPVPTISWRRADGKQIPRKARRHRSNGLLEIPNFQQEDAGLYECVAENVRGKNV 307

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   ++D H   + ++ W C A G P  +Y W ++GE       PL  
Sbjct: 308 ARGQLTFYAQPNWIQKISDVHAAIEENVFWECHASGRPKPSYRWLKDGE-------PLLP 360

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           Q R  I+   LTIR ++   D  MYQC A+N+  T ++SA+L V+ + P F K  L+  T
Sbjct: 361 QGRVQIEQGSLTIRNVSLS-DAGMYQCVAENRHGTIFASAELSVIAVGPDFSKTLLKKLT 419

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+P+P + WKK  +I+    R  + ++G+L I  V++ D+G Y+C
Sbjct: 420 LVKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDTGSYTC 479

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 480 VATNHFGTASSTGSLVV-KDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFN 538

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I    D +  E        G L I +     AG+Y C+V+++V K+S    +IV GP
Sbjct: 539 GHLIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGP 598

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  GA N  PIT Y + ART ++  W  VS   + + +D 
Sbjct: 599 PGPPEDVTIDEITDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVS--TVPEVID- 655

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+V+A N +G GEPS PS    T    P   P+ + GGGG
Sbjct: 656 --GKTFTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGG 713

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +  +T+    +    V R  S   +
Sbjct: 714 SKSELVITWETVPEELQNGGGFGYVVAFRPFGTISWM-QTVVASPDASRYVFRNESLPPF 772

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + YEVKV   N+ G G  S V
Sbjct: 773 SPYEVKVGVYNNKGEGSFSPV 793



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 158/657 (24%), Positives = 241/657 (36%), Gaps = 69/657 (10%)

Query: 350 DGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKF---PNNF 403
           +G L     +Q DAG Y C   NV+ K    G                 QL F   PN  
Sbjct: 279 NGLLEIPNFQQEDAGLYECVAENVRGKNVARG-----------------QLTFYAQPNWI 321

Query: 404 PKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQ 463
            K         + V  EC A G P PSY W + G PL      +     LTI NV + D 
Sbjct: 322 QKISDVHAAIEENVFWECHASGRPKPSYRWLKDGEPLLPQGRVQIEQGSLTIRNVSLSDA 381

Query: 464 GEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKH--MDNQADLTWTCEAFGVPDVTY 520
           G Y C A N    + +S  +S+ A  P+F+  L  K   +    ++   C+    P  TY
Sbjct: 382 GMYQCVAENRHGTIFASAELSVIAVGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPTY 441

Query: 521 SWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQ 579
           SW +  ++L        + +R  + D+  ++R +N  + D   Y C A N   T  S+  
Sbjct: 442 SWKKGKDIL-------RENERITVLDDG-SLRIVNVTKSDTGSYTCVATNHFGTASSTGS 493

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE 639
           L V+         P   +   GE   +    + + +    F W  +G++I        FE
Sbjct: 494 L-VVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFEKDGDHFE 552

Query: 640 N-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
                   G+L+I  +    +G Y C          +   LIV   P   E +       
Sbjct: 553 RVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEDVTIDEITD 612

Query: 693 AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 752
               L  R  A     + +  +       +G   ++ +  P + IDG     T       
Sbjct: 613 TTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTV--PEV-IDGKTFTATVVGLNPW 669

Query: 753 GEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGA 802
            EYE   V  + +G     + S         P   P  V      K+   I W    +  
Sbjct: 670 VEYEFRVVAANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSELVITWETVPEEL 729

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            NG     Y +  R     +W      V   +  RY  R E+     L P+S YE KV  
Sbjct: 730 QNGGGF-GYVVAFRPFGTISWMQTV--VASPDASRYVFRNES-----LPPFSPYEVKVGV 781

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY-Y 921
            N  G G   SP     +  ++P +AP  +        D+ ISW P PRE Q+   I  Y
Sbjct: 782 YNNKGEGS-FSPVTVVYSAEEEPTRAPITVLARSLSATDIEISWAP-PRENQHKGRIQGY 839

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++   + ++ E  +  ++  GN   A  ++ +      Y + V+A N  G GP S +
Sbjct: 840 EVRCWRHDEKEENARKIRTVGNQTSA--KVTNLQGNALYHLAVKAYNTAGTGPSSAM 894


>gi|449474236|ref|XP_002186936.2| PREDICTED: contactin-4 [Taeniopygia guttata]
          Length = 1028

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 270/801 (33%), Positives = 409/801 (51%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP F+++P  ++F L        + LSC   G P P+  W        +L  + I
Sbjct: 20  DNTLHGPVFLQEPDSLIFPLGSEE--KKVKLSCEVKGNPRPTIGW--------KLNGSSI 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R++L  G+L+IN+P + +D G Y C A+N FG+I+S   QL F ++  F  +  
Sbjct: 70  DVGMDYRYSLLEGDLLINNPNKSQDAGMYQCVATNPFGTIVSREAQLQFAYLENFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   Q  G  + C PP +   + Y W  + +P+FV +D R FVS + G LY + +E  
Sbjct: 130 STVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPSFVHQDSRRFVSQETGNLYIAKVETS 189

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V+++   GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 190 DVGNYTCVVTNTVTNSKVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSA--KGTTVKL 247

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+ +W R  G  LPR A     + +L IPN + ED G Y C A N R    
Sbjct: 248 ECFALGNPVPTISWRRADGKQLPRKARRHRSSGLLEIPNFQQEDAGLYECVAENVRGKNV 307

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+P++T  ++D H   +  ++W C A G P  +Y W ++GE       PL+ 
Sbjct: 308 ARGQLTFYAQPSWTQQISDVHAAIEERVSWECRASGRPKPSYRWLKDGE-------PLQP 360

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           Q R  ++   LTI  ++   D  MYQC A+N+    ++SA+L V+ + P F K  L+  T
Sbjct: 361 QGRLQLEQGSLTIPNVSLS-DAGMYQCVAENRHGVIFASAELSVIAIGPDFSKTLLKKLT 419

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+P+P + WKK  +I+    R  + ++G+L I  V++ D+G Y+C
Sbjct: 420 LVKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIINVTKSDAGSYTC 479

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 480 VATNHFGTASSTGSLVV-KDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFN 538

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I    D +  E    +  G L+ I +     AG+Y C+V+++V K+S    +IV GP
Sbjct: 539 GHLIDFEKDGDHFERVGGDSAGDLM-IRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGP 597

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + EV +++A + W  GA N  PIT Y + ART ++  W  VS   + + +D 
Sbjct: 598 PGPPEAVTIEEVTESTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVS--TVPEVID- 654

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             GR   +    L PW  YEF+V+A N +G GEPSSPS +  T    P   P+ + GGGG
Sbjct: 655 --GRTFTATVVGLNPWVEYEFRVVAANLIGIGEPSSPSEKRRTEEALPEVTPANVSGGGG 712

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +  +T+    +    V R  S   +
Sbjct: 713 SKSELVITWETVPEELQNGGGFGYVVAFRPLGTVSWM-QTVVASPDAARYVFRNESLPPF 771

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + YEVKV   N+ G G  S V
Sbjct: 772 SPYEVKVGVYNNKGEGSFSPV 792



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 150/651 (23%), Positives = 245/651 (37%), Gaps = 64/651 (9%)

Query: 351 GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA 410
           G L     +Q DAG Y C  ++     G+N     L  +   ++ Q        +     
Sbjct: 280 GLLEIPNFQQEDAGLYECVAENV---RGKNVARGQLTFYAQPSWTQ--------QISDVH 328

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
               ++V  EC A G P PSY W + G PL      +     LTIPNV + D G Y C A
Sbjct: 329 AAIEERVSWECRASGRPKPSYRWLKDGEPLQPQGRLQLEQGSLTIPNVSLSDAGMYQCVA 388

Query: 471 SNDRSALESSVTISIQA-EPNFTIPLTDKH--MDNQADLTWTCEAFGVPDVTYSWFRNGE 527
            N    + +S  +S+ A  P+F+  L  K   +    ++   C+    P  TYSW +  +
Sbjct: 389 ENRHGVIFASAELSVIAIGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPTYSWKKGKD 448

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           +L        + +R  + D+  ++R +N  + D   Y C A N   T  S+  L V+   
Sbjct: 449 IL-------RENERITVLDDG-SLRIINVTKSDAGSYTCVATNHFGTASSTGSL-VVKDP 499

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------ 640
                 P   +   GE   +    + + +    F W  +G++I        FE       
Sbjct: 500 TRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFEKDGDHFERVGGDSA 559

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G+L+I  +    +G Y C          +   LIV   P   E +  +    +   L  R
Sbjct: 560 GDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIEEVTESTAQLSWR 619

Query: 701 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CV 758
             A     + +  +       +G   ++ +  P + IDG     T        EYE   V
Sbjct: 620 PGADNHSPITMYVVQARTPFSVGWQAVSTV--PEV-IDGRTFTATVVGLNPWVEYEFRVV 676

Query: 759 VKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATNGR 806
             + +G       S K       P   P  V      K+   I W        +G   G 
Sbjct: 677 AANLIGIGEPSSPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGY 736

Query: 807 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
            +  ++ +   +W  T       V   +  RY  R E+     L P+S YE KV   N  
Sbjct: 737 -VVAFRPLGTVSWMQT------VVASPDAARYVFRNES-----LPPFSPYEVKVGVYNNK 784

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY-YKIFW 925
           G G   SP     +  ++P +AP+ +        D+ +SW P P E Q+   I  Y++  
Sbjct: 785 GEGS-FSPVTVVYSAEEEPTRAPTTVLARSISASDVEVSWAP-PWENQHKGRIQGYEVRC 842

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            + ++ E  ++ ++  GN      ++ +      Y + V+A N  G GP S
Sbjct: 843 WRHDEKEENAKRIRTVGNQ--TSTKVSNLRGNALYHLAVRAYNTAGTGPSS 891


>gi|345786232|ref|XP_003432799.1| PREDICTED: contactin-4 isoform 1 [Canis lupus familiaris]
          Length = 1026

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 269/794 (33%), Positives = 402/794 (50%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P+ V+F L+       + L+C   G P P   W        +L    +D   D
Sbjct: 25  GPVFIQEPSHVMFPLNSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDVDTGVD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVEGSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLRFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RQGQGMVLLCGPPAHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K   +FP+T P A   G  V+LEC A 
Sbjct: 193 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPETVPTA--KGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  +DR  
Sbjct: 311 TFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+  +L I  +N   D  MYQC A+N+    +SSA+L V+ + P F +  L+  T    G
Sbjct: 364 IEQGMLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP + WKK  +I+    R  I E+G+L I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLRIVNVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ NG  I 
Sbjct: 483 FGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 542 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
           GV + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 602 GVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 717 VITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEV 775

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 776 KVGVFNNKGEGPFS 789



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 147/648 (22%), Positives = 235/648 (36%), Gaps = 56/648 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAIEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +    +L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGMLNITIVNLSDAGMYQCV 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L        + +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DIL-------RENERITISEDG-SLRIVNVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 497 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEGVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRH 843

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 DDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTGPSS 889


>gi|45382937|ref|NP_989943.1| contactin-5 precursor [Gallus gallus]
 gi|55976559|sp|Q90W79.1|CNTN5_CHICK RecName: Full=Contactin-5; AltName: Full=F11 axonin-1-related
           protein 2; Short=FAR-2; Flags: Precursor
 gi|15216160|emb|CAC51431.1| FAR-2 protein [Gallus gallus]
          Length = 1027

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/796 (33%), Positives = 394/796 (49%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P DV+F          ++L+C A G P P+Y W +            ID  SD
Sbjct: 25  GPVFVQEPDDVIFPTDSEE--KKVSLNCQAHGSPTPTYRWLRN--------GTEIDVESD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G+LII++P +++D G Y C  +N FGSI+S    L F ++G F+ + R+    
Sbjct: 75  YRYSLIEGSLIISNPNEMKDSGQYQCLTTNMFGSILSREAVLQFAYLGNFSGRTRSAVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 135 REGQGVVLMCSPPLHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 194

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 195 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYTVTAA--RGTTVKMECFAL 252

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+ +W +     P  A       +L IPNV++ED G Y C+A N R        + 
Sbjct: 253 GNPVPTISWKKVNGHNPSKARLRKSQAVLEIPNVQLEDAGMYECKAENSRGRNVFRGQLQ 312

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P +   L D  +D+   L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 313 VYTYPQWVEKLNDTELDSGEQLRWECKATGKPRPTYRWLKNG-------VPLWPQSRIEM 365

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            ++VL IR +N   D  MYQC A+N+  T Y+SA+L++L   P+F    +       +G 
Sbjct: 366 INSVLMIRTVNIS-DAGMYQCLAENKYGTIYASAELKILASAPTFPLNQMRKTIIITKGQ 424

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+A+PKP   WKK    +    R  I   G+L I   S+ D G YSC   NV 
Sbjct: 425 EVVIECKPQASPKPTITWKKGDKALRESKRVTILPQGSLRILNASKSDEGRYSCRGVNVF 484

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    + V   P+  E  P KI +    ++ L C A  +  LDV + WT NG  I  
Sbjct: 485 GSAEIVASVSVKE-PTRIELTPKKIELTVGESIVLSCKALHDSTLDVTFYWTLNGQPIDF 543

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           + +    E+         L I N     AG Y C V++    +S +T ++V GPPG PG 
Sbjct: 544 DKEDGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADAVSDETELLVRGPPGPPGV 603

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+  T+AT+ W+ GA N  PI+ Y + AR+ ++  W  V      K V D  +G  
Sbjct: 604 VIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGWQTV------KTVPDVISGDM 657

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N++G G+PS+PS    T    P   P+ + G  G+  +L
Sbjct: 658 ESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSGRSGRRHEL 717

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +    +    + R  S    T +EV
Sbjct: 718 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEV 776

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S +
Sbjct: 777 KVGVYNNKGDGPFSPI 792


>gi|334335513|ref|XP_003341782.1| PREDICTED: contactin-4 [Monodelphis domestica]
          Length = 1027

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 276/810 (34%), Positives = 405/810 (50%), Gaps = 39/810 (4%)

Query: 178 MDIENPD--KIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 235
           MD E PD      GP FI++P+ V+F L        + L+C   G P P   W       
Sbjct: 12  MDCEVPDDDNTLHGPIFIREPSHVMFPLDSEE--KKVKLNCEVKGNPKPLIRW------- 62

Query: 236 DRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
            +L    +D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S+  +L F ++
Sbjct: 63  -KLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSKEAKLQFAYL 121

Query: 296 GEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GAL 353
             F  +    +   Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G L
Sbjct: 122 ENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNL 179

Query: 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAP 411
           Y + +E+ D GNY+C V + V++    GP  PL +       +   K    FP+T P A 
Sbjct: 180 YIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA- 238

Query: 412 KAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
             G  V+LEC A G PVP+  W R  G  + R A     N IL IPN + ED G Y C A
Sbjct: 239 -KGATVKLECFALGNPVPTIIWRRADGKQIARKARRHKSNGILEIPNFQQEDAGLYECVA 297

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R    +   ++  A+PN+   + D H+  +  + W C+A G P  TY W +NGE   
Sbjct: 298 ENSRGKNVARGQLTFYAQPNWNQKINDIHVAIEESIFWECKANGRPKPTYRWLKNGE--- 354

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
               PL  QDR  I+   L I  +N   D  MYQC A+N+    ++SA+L V+ L P F 
Sbjct: 355 ----PLLTQDRIQIEHGTLNITTVNLS-DAGMYQCVAENRHGIIFASAELSVIALGPDFS 409

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
           +  L+  T    GG V I C P+A+P+P + WKK   I+    R    E+G+L I  V++
Sbjct: 410 RTLLKRMTLVKVGGEVVIECKPKASPRPAYTWKKGKEIVRENERITFSEDGSLRIMNVTK 469

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELL 709
            D+G Y+C ATN  G   S G LIV         +PP  + +    ++ L C    +  L
Sbjct: 470 SDAGSYTCIATNHFGTASSTGNLIVKDATRLL--VPPSSMDVTVGESIVLPCQVSHDHSL 527

Query: 710 DVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           D+ + W+ NG  I  + D +  E        G L I +     AG+Y C+V+++V KIS 
Sbjct: 528 DIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISA 587

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
              +IV GPPG P  V + E+  T+A + W  GA N  PIT Y I ART ++  W  V  
Sbjct: 588 TADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGADNHSPITMYVIQARTPFSVGWQAV-- 645

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
           + + + +D   GR   +    L PW  YEF+V+A N +G GEPS PS +  T    P   
Sbjct: 646 NTVPELID---GRTFTATVVGLNPWVEYEFRVVAANTIGIGEPSRPSEKRRTEEALPEVT 702

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           P+ + GGGG   +L I+WE +P E QN     Y + +R      +  +T+    +    V
Sbjct: 703 PANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPFGKVSWM-QTVLASADASKYV 761

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            R  S   ++ YEVKV   N+ G G  S V
Sbjct: 762 FRNESLPPFSPYEVKVGVYNNKGEGSFSPV 791



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 145/652 (22%), Positives = 235/652 (36%), Gaps = 63/652 (9%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWNQKI--NDIHVAIEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           +      +  EC A G P P+Y W + G PL      +  +  L I  V + D G Y C 
Sbjct: 332 S------IFWECKANGRPKPTYRWLKNGEPLLTQDRIQIEHGTLNITTVNLSDAGMYQCV 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDKH--MDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + +S  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENRHGIIFASAELSVIALGPDFSRTLLKRMTLVKVGGEVVIECKPKASPRPAYTWKKGK 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E++       E++   F +D  L I  +  + D   Y C A N   T  S+  L ++   
Sbjct: 446 EIVR------ENERITFSEDGSLRIMNVT-KSDAGSYTCIATNHFGTASSTGNL-IVKDA 497

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------ 640
                 P   +   GE   +    + + +    F W  +G++I        FE       
Sbjct: 498 TRLLVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDS 557

Query: 641 -GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+L+I  +    +G Y C          +   LIV   P   E +           L  
Sbjct: 558 AGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGPPGPPEAVTIDEITDTTAQLSW 617

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
           R  A     + +  I       +G   +N +  P + IDG     T        EYE   
Sbjct: 618 RPGADNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGRTFTATVVGLNPWVEYEFRV 674

Query: 758 VVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATNG 805
           V  +T+G     + S K       P   P  V      K+   I W        +G   G
Sbjct: 675 VAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFG 734

Query: 806 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
             +  ++   + +W  T           +  +Y  R E+     L P+S YE KV   N 
Sbjct: 735 Y-VVAFRPFGKVSWMQTVL------ASADASKYVFRNES-----LPPFSPYEVKVGVYNN 782

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY-YKIF 924
            G G   SP     +  ++P + P  I        D+ + W   P E  +   I  Y++ 
Sbjct: 783 KGEGS-FSPVTVVYSAEEEPTKPPPSIFARSLSATDIEVFWSS-PLETLSKGRIQGYEVK 840

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +   +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 841 YWSHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTGPYS 890


>gi|397522453|ref|XP_003831281.1| PREDICTED: contactin-4 [Pan paniscus]
          Length = 1026

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/799 (33%), Positives = 400/799 (50%), Gaps = 35/799 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 ARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGE-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T
Sbjct: 359 RDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVAIECKPKASPKPVYTWKKGRDIVKENERITISEDGNLRIINVTKSDAGSYTC 477

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 478 IATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GP
Sbjct: 537 GHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 596

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  PIT Y I ART ++  W  VS   + + +D 
Sbjct: 597 PGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID- 653

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 654 --GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGG 711

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +    L    +    V R  S   +
Sbjct: 712 SKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPF 770

Query: 958 TEYEVKVQAINDVGPGPES 976
           + +EVKV   N+ G GP S
Sbjct: 771 SPFEVKVGVFNNKGEGPFS 789



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 146/649 (22%), Positives = 235/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCL 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           +++       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DIV-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 497 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   ++ +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 843

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 E-DKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 889


>gi|28373122|ref|NP_783200.1| contactin-4 isoform a precursor [Homo sapiens]
 gi|332688245|ref|NP_001193884.1| contactin-4 isoform a precursor [Homo sapiens]
 gi|55976529|sp|Q8IWV2.1|CNTN4_HUMAN RecName: Full=Contactin-4; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 2; Short=BIG-2;
           Flags: Precursor
 gi|26891535|gb|AAM00025.1| contactin 4 [Homo sapiens]
 gi|29837411|gb|AAP05786.1| BIG-2 [Homo sapiens]
 gi|119584279|gb|EAW63875.1| contactin 4, isoform CRA_c [Homo sapiens]
 gi|119584282|gb|EAW63878.1| contactin 4, isoform CRA_c [Homo sapiens]
          Length = 1026

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/799 (33%), Positives = 400/799 (50%), Gaps = 35/799 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 ARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGE-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T
Sbjct: 359 RDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTC 477

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 478 IATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GP
Sbjct: 537 GHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 596

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  PIT Y I ART ++  W  VS   + + +D 
Sbjct: 597 PGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID- 653

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 654 --GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGG 711

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +    L    +    V R  S   +
Sbjct: 712 SKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPF 770

Query: 958 TEYEVKVQAINDVGPGPES 976
           + +EVKV   N+ G GP S
Sbjct: 771 SPFEVKVGVFNNKGEGPFS 789



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 147/649 (22%), Positives = 235/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCL 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 497 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   ++ +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 843

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 E-DKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 889


>gi|9506949|ref|NP_062202.1| contactin-3 precursor [Rattus norvegicus]
 gi|55976163|sp|Q62682.1|CNTN3_RAT RecName: Full=Contactin-3; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 1; Short=BIG-1;
           Flags: Precursor
 gi|563133|gb|AAA63607.1| BIG-1 protein [Rattus norvegicus]
          Length = 1028

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 271/797 (34%), Positives = 398/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDTSL 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           D R+ L+GGNLI+ +P +  D GSY C A+N  G+I+S   +L F ++  F  +    + 
Sbjct: 74  DHRYKLNGGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIELQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P P       FN +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGMPFPTKIKLRKFNGVLEIPNFQQEDTGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P +   L D     +  L W C A G P  +Y W +NG+ L  E       +R 
Sbjct: 312 LTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKPSYRWLKNGDALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+VL   P F + P++       
Sbjct: 365 QIENGALTIANLNVS-DSGMFQCIAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P+    WKK   ++    R  +  +G L I  V++ D+GIY+C A N
Sbjct: 424 GSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G      +L+V   P+     P  + +A   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTQLVVTE-PTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLT 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + WT+G  +  P+  Y + ART ++  W NV    + + +D  T R
Sbjct: 602 ENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQNV--RTVPEAIDGKT-R 658

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
               +E  L PW  YEF+V+A N++G GEPS PS +  T    P  APS + GGGG   +
Sbjct: 659 TATVVE--LNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +    +    N    V R  S   ++ YE
Sbjct: 717 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 157/659 (23%), Positives = 243/659 (36%), Gaps = 80/659 (12%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q D G+Y C  ++     G+N     L  +    + QL       K   
Sbjct: 278 FNGVLEIPNFQQEDTGSYECIAEN---SRGKNVARGRLTYYAKPYWVQLL------KDVE 328

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 329 TAVE--DSLYWECRASGKPKPSYRWLKNGDALVLEERIQIENGALTIANLNVSDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    +   C+    P     W + 
Sbjct: 387 IAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRALSFWKKG 446

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
                 +T+  E      + D  L I  +  + D  +Y C A+NQ      + QL V+T 
Sbjct: 447 ------DTVVREQARISLLNDGGLKIMNVT-KADAGIYTCIAENQFGKANGTTQL-VVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE---- 639
                  P   +   GE  ++ + C  +  P     F W  +G +         FE    
Sbjct: 499 PTRIILAPSNMDVAVGE--SIILPCQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGG 556

Query: 640 --NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
             +G+L+I  +    SG Y C          S   LIV   P   E +  K+        
Sbjct: 557 SSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDEITDTTA 614

Query: 698 QLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
           QL  +  T+    V    +       +G  ++  +      IDG     T        EY
Sbjct: 615 QLSWTEGTDSHSPVISYAVQARTPFSVGWQNVRTVPEA---IDGKTRTATVVELNPWVEY 671

Query: 756 E--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW------ 798
           E   V  + +G         K+ T+       P  + GG       ++   I W      
Sbjct: 672 EFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGG----SRSELVITWDPVPEE 727

Query: 799 -TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
             +G   G  +  ++ +  T W      +   V   +  RY  R E+     +VP+S YE
Sbjct: 728 LQNGGGFGY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IVPFSPYE 775

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            KV   N  G G P SP     +  ++P  APS I        ++ +SW  +P +  N  
Sbjct: 776 VKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKSSNGR 834

Query: 918 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            + Y++ +      E  S  +K  GN   AV+R + S   YYT     V+A N  G GP
Sbjct: 835 LLGYEVRYWNNGGEEESSSKVKVAGNQTSAVLRGLKSNLAYYT----AVRAYNTAGAGP 889


>gi|344276063|ref|XP_003409829.1| PREDICTED: contactin-4 [Loxodonta africana]
          Length = 1004

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 266/791 (33%), Positives = 403/791 (50%), Gaps = 36/791 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        +L   ++D   D
Sbjct: 4   GPIFVQEPSHVMFPLDSEE--KKVRLSCEVKGNPKPHIRW--------KLNGTVVDIGMD 53

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 54  FRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 113

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 114 RQGQGMVLLCGPPPHAGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 171

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P A   G  V+LEC A 
Sbjct: 172 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAA--KGTTVKLECFAL 229

Query: 425 GYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 230 GNPVPTIIWRRVDGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVAKGQL 289

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  QDR  
Sbjct: 290 TFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGE-------PLLTQDRIQ 342

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+  +L +  +N   D  MYQC A+N+    ++SA+L V+ + P F +  L+  T    G
Sbjct: 343 IEQGMLNMTTVNLS-DAGMYQCVAENKHGVIFASAELSVIAVGPDFSRTLLKRVTLVKVG 401

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP + WKK  +I+    R  + E+G+L I  V++ D+G Y+C ATN 
Sbjct: 402 GEVIIECKPKASPKPVYTWKKGRDIVRENERIIVSEDGSLRIINVTKSDAGSYTCIATNH 461

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  LD+ + WT NG  I 
Sbjct: 462 FGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGRLID 520

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            N D +  E    +  G L+ I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 521 FNKDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCLVQTSVDKLSAAADLIVRGPPGPPE 579

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 580 AVSIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 634

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 635 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 694

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +  +T+    +    V R  S   ++ +EV
Sbjct: 695 VITWETVPEELQNGGGFGYVVAFRPYGKKSWM-KTVMASADASRYVFRNESLSPFSPFEV 753

Query: 963 KVQAINDVGPG 973
           KV   N+ G G
Sbjct: 754 KVGVFNNKGEG 764



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 142/647 (21%), Positives = 231/647 (35%), Gaps = 55/647 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 256 NGILEIPNFQQEDAGLYECVAEN---SRGKNVAKGQLTFYAQPNWIQKI--NDIHVAIEE 310

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +    +L +  V + D G Y C 
Sbjct: 311 ------NVFWECKANGRPKPTYRWLKNGEPLLTQDRIQIEQGMLNMTTVNLSDAGMYQCV 364

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + +S  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 365 AENKHGVIFASAELSVIAVGPDFSRTLLKRVTLVKVGGEVIIECKPKASPKPVYTWKKGR 424

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           +++        + +R  + ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 425 DIV-------RENERIIVSEDG-SLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 475

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G +I        FE      
Sbjct: 476 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGRLIDFNKDGDHFERVGGDS 535

Query: 641 -GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+L+I  +    +G Y C          +   LIV   P   E +           L  
Sbjct: 536 AGDLMIRNIQLKHAGKYVCLVQTSVDKLSAAADLIVRGPPGPPEAVSIDEITDTTAQLSW 595

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
           R        + +  I       +G   +N +  P + IDG     T        EYE   
Sbjct: 596 RPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFRT 652

Query: 758 VVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPIT 809
           V  + +G     + S K       P   P  V      K+   I W    +   NG    
Sbjct: 653 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGF- 711

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y +  R     +W      +   +  RY  R E+     L P+S +E KV   N  G G
Sbjct: 712 GYVVAFRPYGKKSWMKTV--MASADASRYVFRNES-----LSPFSPFEVKVGVFNNKGEG 764

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
              SP     +  ++P + P  I        D+ + W   P EK       Y++ + + +
Sbjct: 765 L-FSPITTVYSAEEEPTKPPPSIFARSLSATDIEVFWAS-PLEKNIGRIQGYEVKYWRHD 822

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 823 DKEENARKIRTIGN--HTSTKITNLKGSALYHLAVKAYNSAGTGPSS 867


>gi|395824772|ref|XP_003785629.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Otolemur garnettii]
          Length = 1470

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 267/797 (33%), Positives = 403/797 (50%), Gaps = 34/797 (4%)

Query: 188  RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
            +GP FIK+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 466  QGPVFIKEPSNSIFSVGSED--KKITLNCEARGSPSPHYRW--------QLNGSDIDMSL 515

Query: 248  DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
            + R+ L+GGNL++ +P +  D GSY C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 516  EHRYKLNGGNLVVINPNRNRDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 575

Query: 308  -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
              +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 576  VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 635

Query: 366  YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
            Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 636  YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 693

Query: 424  FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
             G P+P  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 694  LGNPIPQINWRRSDGLPFSSKIKLRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 753

Query: 483  ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
            ++  A+P++   + D  +  + +L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 754  LTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKNGEALVLE-------ERI 806

Query: 543  FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
             I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++    A  
Sbjct: 807  QIENGALTISNLNVS-DSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQAQV 865

Query: 603  GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
            G  V++ C P A+P+ +  WKK   I+    R    ++G L I+ V++ D+G Y+CTA N
Sbjct: 866  GSLVSLDCKPRASPRAQSFWKKGEVIVQEQERISFLKDGGLKIANVTKADAGTYTCTAEN 925

Query: 663  VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
              G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 926  QFGKANGTTHLVVTE-PTKITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALA 984

Query: 723  G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
                + +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 985  DFKKEGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 1043

Query: 782  GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
              V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 1044 ENVKVDEITDTTAQLSWKEGTDNHSPVLSYSIQARTPFSVGWQTVT--TVPEVID---GK 1098

Query: 842  KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
               +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 1099 THTATVVELNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 1158

Query: 902  LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
            L I+W+P+P E QN   + Y + +R    T +  +T+    +    V R  S   ++ YE
Sbjct: 1159 LVITWDPVPEELQNGEGLGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIMPFSPYE 1217

Query: 962  VKVQAINDVGPGPESEV 978
            VKV   N+ G GP S V
Sbjct: 1218 VKVGVYNNKGEGPFSPV 1234



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 162/658 (24%), Positives = 252/658 (38%), Gaps = 74/658 (11%)

Query: 349  YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
            ++G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 720  FNGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 771

Query: 409  EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                  D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 772  ---AVEDNLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVSDSGMFQC 828

Query: 469  RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
             A N    + SS  + + A  P+F+     K +  Q    ++  C+    P     W + 
Sbjct: 829  IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQAQVGSLVSLDCKPRASPRAQSFW-KK 887

Query: 526  GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
            GE++      +++Q+R  F++D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 888  GEVI------VQEQERISFLKDGGLKIANVT-KADAGTYTCTAENQFGKANGTTHL-VVT 939

Query: 585  LKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE--- 639
                    P   +   GE  +V + C  +  P     F W  +G +         FE   
Sbjct: 940  EPTKITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGALADFKKEGSHFEKVG 997

Query: 640  ---NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
               +G+L+I  +    SG Y C          S   LIV   P   E +  K+       
Sbjct: 998  GSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--KVDEITDTT 1055

Query: 697  LQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             QL     T+    V    I       +G   +  +  P + IDG     T        E
Sbjct: 1056 AQLSWKEGTDNHSPVLSYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVE 1112

Query: 755  YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
            YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 1113 YEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPE 1168

Query: 801  GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
               NG  +  Y +  R    +TW      V   +  RY  R E+     ++P+S YE KV
Sbjct: 1169 ELQNGEGL-GYVVAFRPLGVTTWIQTV--VTSPDTPRYVFRNES-----IMPFSPYEVKV 1220

Query: 861  IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
               N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   + 
Sbjct: 1221 GVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVFANSLSSSEIEVSWNTIPWKLSNGHLLG 1279

Query: 921  YKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPES 976
            Y++ +      E  S  ++  GN   A +R + S   YYT     V+A N  GPGP S
Sbjct: 1280 YEVRYWNSGGREESSSKVRVAGNETSARLRGLKSNLAYYT----AVRAYNSAGPGPFS 1333


>gi|114585183|ref|XP_001138350.1| PREDICTED: contactin-4 isoform 4 [Pan troglodytes]
          Length = 1026

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/799 (33%), Positives = 400/799 (50%), Gaps = 35/799 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 ARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGE-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T
Sbjct: 359 RDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVAIECKPKASPKPVYTWKKGRDIVKENERITISEDGNLRIINVTKSDAGSYTC 477

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 478 IATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GP
Sbjct: 537 GHLIDFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 596

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  PIT Y I ART ++  W  VS   + + +D 
Sbjct: 597 PGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID- 653

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 654 --GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGG 711

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +    L    +    V R  S   +
Sbjct: 712 SKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPF 770

Query: 958 TEYEVKVQAINDVGPGPES 976
           + +EVKV   N+ G GP S
Sbjct: 771 SPFEVKVGVFNNKGEGPFS 789



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 145/649 (22%), Positives = 235/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCL 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           +++       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DIV-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        +E      
Sbjct: 497 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDPYERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   ++ +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 843

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 E-DKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 889


>gi|395516508|ref|XP_003762429.1| PREDICTED: contactin-4 [Sarcophilus harrisii]
          Length = 1094

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 270/801 (33%), Positives = 401/801 (50%), Gaps = 35/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI +P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 87  DNTLHGPIFIHEPSHVMFPLDSEE--KKVKLNCEVKGNPKPLIRW--------KLNGTDV 136

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S+  +L F ++  F  +  
Sbjct: 137 DIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSKEAKLQFAYLENFKTRTR 196

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 197 STVSVRQGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 254

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 255 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 312

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 313 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 372

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  +  + W C+A G P  TY W +NGE L +       
Sbjct: 373 ARGQLTFYAQPNWIQKINDIHVAIEESIFWECKANGRPKPTYRWLKNGESLLT------- 425

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           QDR  I+   L I  +N   D  MYQC A+N+    ++SA+L V+ L P F +  L+  T
Sbjct: 426 QDRIQIEHGTLNITTVNLS-DAGMYQCVAENRHGIIFASAELSVIALGPDFSRTLLKRMT 484

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+P+P + WKK   I+    R    E+G+L I  V++ D+G Y+C
Sbjct: 485 LVKVGGEVVIECKPKASPRPVYTWKKGKEIVRENERITFSEDGSLRIMNVTKSDAGSYTC 544

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 545 IATNHFGTASSTGNLVV-KDPTRLLVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFN 603

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E        G L I +     AG+Y C+V+++V KIS    +IV GP
Sbjct: 604 GRLIDFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGP 663

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  GA N  P+T Y I ART ++  W  V  + + + +D 
Sbjct: 664 PGPPEAVTIDEITDTTAQLSWRPGADNHSPVTMYVIQARTPFSVGWQAV--NTVPELID- 720

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             GR   +    L PW  YEF+V+A N +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 721 --GRTFTATVVSLNPWVEYEFRVVAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGG 778

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +  +T+    +    V R  S   +
Sbjct: 779 SKSELVITWETVPEELQNGGGFGYVVAFRPFGKVSWM-QTVLASADASRYVFRNESLPPF 837

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + YEVKV   N+ G G  S V
Sbjct: 838 SPYEVKVGVYNNKGEGSFSPV 858



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 147/652 (22%), Positives = 235/652 (36%), Gaps = 63/652 (9%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 344 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAIEE 398

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           +      +  EC A G P P+Y W + G  L      +  +  L I  V + D G Y C 
Sbjct: 399 S------IFWECKANGRPKPTYRWLKNGESLLTQDRIQIEHGTLNITTVNLSDAGMYQCV 452

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDKH--MDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + +S  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 453 AENRHGIIFASAELSVIALGPDFSRTLLKRMTLVKVGGEVVIECKPKASPRPVYTWKKGK 512

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E++       E++   F +D  L I  +  + D   Y C A N   T  S+  L V+   
Sbjct: 513 EIVR------ENERITFSEDGSLRIMNVT-KSDAGSYTCIATNHFGTASSTGNL-VVKDP 564

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------ 640
                 P   +   GE   +    + + +    F W  +G +I        FE       
Sbjct: 565 TRLLVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGRLIDFDKDGDHFERVGGQDS 624

Query: 641 -GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+L+I  +    +G Y C          +   LIV   P   E +           L  
Sbjct: 625 AGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGPPGPPEAVTIDEITDTTAQLSW 684

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
           R  A     + +  I       +G   +N +  P + IDG     T  S     EYE   
Sbjct: 685 RPGADNHSPVTMYVIQARTPFSVGWQAVNTV--PEL-IDGRTFTATVVSLNPWVEYEFRV 741

Query: 758 VVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATNG 805
           V  +T+G     + S K       P   P  V      K+   I W        +G   G
Sbjct: 742 VAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFG 801

Query: 806 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
             +  ++   + +W  T    ++        RY  R E+     L P+S YE KV   N 
Sbjct: 802 Y-VVAFRPFGKVSWMQTVLASAD------ASRYVFRNES-----LPPFSPYEVKVGVYNN 849

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY-YKIF 924
            G G   SP     +  ++P + P  I        D+ + W   P E  +   I  Y++ 
Sbjct: 850 KGEGS-FSPVTVVYSAEEEPTKPPPSIFARSLSATDIEVFWSS-PLESLSKGRIQGYEVK 907

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +   +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 908 YWSHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTGPYS 957


>gi|332231553|ref|XP_003264959.1| PREDICTED: contactin-4 isoform 2 [Nomascus leucogenys]
          Length = 1026

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 267/799 (33%), Positives = 400/799 (50%), Gaps = 35/799 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE L +       
Sbjct: 306 ARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGEHLQT------- 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T
Sbjct: 359 RDRIQIEQGTLNITMVNLS-DAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTC 477

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 478 VATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GP
Sbjct: 537 GHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 596

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  PIT Y I ART ++  W  VS   + + +D 
Sbjct: 597 PGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID- 653

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 654 --GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGG 711

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +    L    +    V R  S   +
Sbjct: 712 SKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPF 770

Query: 958 TEYEVKVQAINDVGPGPES 976
           + +EVKV   N+ G GP S
Sbjct: 771 SPFEVKVGVFNNKGEGPFS 789



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 146/651 (22%), Positives = 235/651 (36%), Gaps = 58/651 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G  L      +     L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEHLQTRDRIQIEQGTLNITMVNLSDAGMYQCL 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DIL-------KENERITISEDG-NLRIINVTKSDAGSYTCVATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 497 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   ++ +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 843

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S +
Sbjct: 844 E-DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSSAI 891


>gi|390475267|ref|XP_002758615.2| PREDICTED: contactin-4 isoform 1 [Callithrix jacchus]
          Length = 1025

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 269/799 (33%), Positives = 402/799 (50%), Gaps = 36/799 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DIGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 ARGQLTFYAQPNWIQKINDVHVAMEENVFWECKANGRPKPTYRWLKNGE-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           QDR  I+   L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T
Sbjct: 359 QDRIQIEQGTLNITVVNLS-DAGMYQCLAENKHGVIFSNAELNVIAVGPDFSRTLLKRLT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTC 477

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 478 IATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E    +  G L+ I N     AG+Y C+V+++V ++S    +IV GP
Sbjct: 537 GHLIDFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 595

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  PIT Y I ART ++  W  VS   + + +D 
Sbjct: 596 PGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID- 652

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 653 --GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGG 710

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +    L    +    V R  S   +
Sbjct: 711 SKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPF 769

Query: 958 TEYEVKVQAINDVGPGPES 976
           + +EVKV   N+ G GP S
Sbjct: 770 SPFEVKVGVFNNKGEGPFS 788



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 145/648 (22%), Positives = 234/648 (36%), Gaps = 57/648 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q        K    
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQ--------KINDV 325

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                + V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 326 HVAMEENVFWECKANGRPKPTYRWLKNGEPLLTQDRIQIEQGTLNITVVNLSDAGMYQCL 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDKH--MDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +++ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSNAELNVIAVGPDFSRTLLKRLTLVKVGGEVVIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 497 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDS 556

Query: 641 -GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+L+I  +    +G Y C          +   LIV   P   E +           L  
Sbjct: 557 AGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSW 616

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
           R        + +  I       +G   ++ +  P + IDG     T        EYE   
Sbjct: 617 RPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFRT 673

Query: 758 VVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPIT 809
           V  + +G     + S K       P   P  V      K+   I W    +   NGR   
Sbjct: 674 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF- 732

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G G
Sbjct: 733 GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG 785

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKK 928
            P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR +
Sbjct: 786 -PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRHE 843

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 -DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 888


>gi|348575281|ref|XP_003473418.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Cavia porcellus]
          Length = 1019

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 271/810 (33%), Positives = 404/810 (49%), Gaps = 34/810 (4%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           QY   I   + + +GP F+K+P++ +F +        ITLSC A G P+P Y W      
Sbjct: 2   QYLQSIFGGELLLQGPVFLKEPSNSIFPVDSED--KKITLSCEAKGNPSPHYRW------ 53

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             +L  + ID   + R+ L+GGNL++ +P +  D GSY C A+N  G+++S   +L F +
Sbjct: 54  --QLNGSNIDMSMEHRYKLNGGNLVVFNPNRSWDTGSYQCFATNSLGTVVSREAKLQFAY 111

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GA 352
           +  F  K    +   +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G 
Sbjct: 112 LENFKTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGH 171

Query: 353 LYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEA 410
           LY + +E  D GNY+C V S V++    G   PL +       +   K    FP+T P A
Sbjct: 172 LYIAKVEPSDVGNYTCVVTSMVTNARVLGSPTPLMLRSDGVMGEYEPKIEVQFPETLPAA 231

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
              G  V+LEC A G PVP  NW R  G P P       FN +L IP  + ED G Y C 
Sbjct: 232 --KGATVKLECFALGNPVPQINWRRSDGMPFPSKIKLRKFNGVLEIPAFQQEDAGSYECI 289

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           A N R    +   ++  A+P++   + D  M  +  L W C A G P  +Y W +NGE L
Sbjct: 290 AENSRGKNVARGRLTYYAKPHWVQFIKDMEMAVEDSLYWECRASGKPKPSYRWLKNGEAL 349

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
             E       +R  I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F
Sbjct: 350 VLE-------ERIQIENGALTISNLN-VTDSGMFQCIAENKHGLIYSSAELKVVASAPDF 401

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
            K P+ +      G  V + C P A+P+    WKK   ++    R    ++G L I+ V+
Sbjct: 402 SKNPMRNLIRVQVGSLVNLDCKPRASPRALCSWKKGDAVVQEHERVSFLKDGGLKIANVT 461

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           + DSG Y+CTA N  G       L+V   P+     P  + ++   ++ L C    + LL
Sbjct: 462 KADSGTYTCTAENQFGKANGTTLLVVTE-PTRITLAPSNMDVSVGESIILPCQVKHDPLL 520

Query: 710 DVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           D+ + W  NG       D +  E    +  G L+ I N     +G+Y C+V++ V  +S+
Sbjct: 521 DIMFTWYFNGALTDFKKDGSHFEKVGGSSSGDLM-IRNIQLRHSGKYVCMVQTGVDSVSS 579

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
              +IV G PG P  V+V E+  T+A + W +G  N  P+T Y I ART ++  W  V+ 
Sbjct: 580 AAELIVRGSPGPPKNVKVDEITDTTAQLSWREGIDNHSPVTSYAIQARTPFSVGWQTVT- 638

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             + + +D   G+   +    L PW  YEF+V+A N++G GEPS PS +  T    P   
Sbjct: 639 -TVPEVID---GKTHTATVVELNPWVEYEFRVVASNKIGGGEPSFPSEKVRTEEAVPEVP 694

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           PS + GGGG   +L I+W+P+P E QN     Y + +R    T +  +T+    +    V
Sbjct: 695 PSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGITTW-IQTVVTSPDTPRYV 753

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            R  S   ++ YEVKV   N+ G GP S V
Sbjct: 754 FRNESIVPFSPYEVKVGVYNNKGEGPFSPV 783



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 159/656 (24%), Positives = 246/656 (37%), Gaps = 74/656 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L   A +Q DAG+Y C  ++     G+N     L  +   ++ Q      F K   
Sbjct: 269 FNGVLEIPAFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQ------FIKDME 319

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 320 MAVE--DSLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 377

Query: 469 RASNDRSALESSVTISIQAE-PNFTI-PLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+  P+ +        L    C+    P    SW + 
Sbjct: 378 IAENKHGLIYSSAELKVVASAPDFSKNPMRNLIRVQVGSLVNLDCKPRASPRALCSWKKG 437

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
             ++       E +   F++D  L I  +  + D   Y C A+NQ   + +   L V+T 
Sbjct: 438 DAVVQ------EHERVSFLKDGGLKIANVT-KADSGTYTCTAENQFG-KANGTTLLVVTE 489

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW---------KKDGNIIGSGGR 634
                  P   +   GE  ++ + C  +  P     F W         KKDG+     G 
Sbjct: 490 PTRITLAPSNMDVSVGE--SIILPCQVKHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGG 547

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   + +         
Sbjct: 548 SS---SGDLMIRNIQLRHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPKNVKVDEITDTT 604

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  R        +    I       +G   +  +  P + IDG     T        E
Sbjct: 605 AQLSWREGIDNHSPVTSYAIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVE 661

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 662 YEFRVVASNKIGGGEPSFPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPE 717

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
              NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE KV
Sbjct: 718 ELQNGEGF-GYVVAFRPLGITTW--IQTVVTSPDTPRYVFRNES-----IVPFSPYEVKV 769

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
              N  G G P SP     +  ++P  APS++        ++ ++W  +P +  N   + 
Sbjct: 770 GVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSAHSLSSSEIEVAWNTIPWKLSNGHLLG 828

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 829 YEVRYWNNGGEEESSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 880


>gi|395824569|ref|XP_003785535.1| PREDICTED: contactin-4, partial [Otolemur garnettii]
          Length = 1013

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 266/794 (33%), Positives = 401/794 (50%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P++++F L        + L+C   G P P   W        +L    +D   D
Sbjct: 12  GPIFIQEPSNLMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDVDMGMD 61

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 62  FRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 121

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 122 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 179

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P A   G  V+LEC A 
Sbjct: 180 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKLECFAL 237

Query: 425 GYPVPSYNWTRRGS-PLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  S P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 238 GNPVPTITWRRADSKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQL 297

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   ++D H+  + ++ W C+A G P  TY W +NGE       PL  +DR  
Sbjct: 298 TFYAQPNWIQKISDIHVAMEENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQ 350

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+ + P F +  L+  T    G
Sbjct: 351 IEQGTLNITIVNLS-DAGMYQCVAENKHGIIFSSAELNVIAVGPDFSRTLLKRVTLVKVG 409

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP + WKK  +++    R  I E+GNL I  V++ D+G Y+C ATN 
Sbjct: 410 GEVVIECKPKASPKPVYTWKKGRDVLRENERITISEDGNLRIVNVTKPDAGSYTCIATNH 469

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ NG  I 
Sbjct: 470 FGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLID 528

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 529 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPE 588

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 589 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 643

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 644 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSERRRTEEALPEVTPANVSGGGGSKSEL 703

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 704 VITWETVPEELQNGRGFGYVVAFRPYGKMSWMLTVLAS-ADASRYVFRNESVRPFSPFEV 762

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 763 KVGVFNNKGEGPFS 776



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 145/652 (22%), Positives = 235/652 (36%), Gaps = 64/652 (9%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q        K    
Sbjct: 264 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQ--------KISDI 312

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                + V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 313 HVAMEENVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 372

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +++ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 373 AENKHGIIFSSAELNVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 432

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L        + +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 433 DVL-------RENERITISEDG-NLRIVNVTKPDAGSYTCIATNHFGTASSTGNL-VVKD 483

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 484 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQD 543

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 544 SAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 603

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 604 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 660

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP- 807
            V  + +G     + S +       P   P  V      K+   I W    +   NGR  
Sbjct: 661 TVAANVIGIGEPSRPSERRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 720

Query: 808 --ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
             +  ++   + +W  T           +  RY  R E+     + P+S +E KV   N 
Sbjct: 721 GYVVAFRPYGKMSWMLTVL------ASADASRYVFRNES-----VRPFSPFEVKVGVFNN 769

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-F 924
            G G  S P+  Y+   ++P + P+ I        D+ + W   P EK       Y++ +
Sbjct: 770 KGEGPFSPPTVVYSA-DEEPTKPPANIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKY 827

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           WR + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 828 WRHE-DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 876


>gi|327269142|ref|XP_003219354.1| PREDICTED: contactin-5-like [Anolis carolinensis]
          Length = 1098

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 264/811 (32%), Positives = 404/811 (49%), Gaps = 34/811 (4%)

Query: 174 YQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           Y      ++ + +  GP FI++P +V+F +   S    ++LSC A   P P+Y+W +   
Sbjct: 81  YHISEAFKHDESVDYGPVFIQEPDNVIFPVD--SDEKKVSLSCQARANPTPTYKWLRN-- 136

Query: 234 VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                    I+  SD R+++  G++IIN+P + +D G Y C  +N FGSI+S    L F 
Sbjct: 137 ------GTEIEIESDYRYSVIEGSIIINNPSETKDTGLYQCITTNMFGSILSREATLQFA 190

Query: 294 FIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-G 351
           ++G F+ + R+     +  G  + C PP + P + Y W  + FP+FV ED R F+S + G
Sbjct: 191 YLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEIIYSWVFNEFPSFVAEDSRRFISQETG 250

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPE 409
            LY S ++  D G+Y C V++ V++     P  PL +       +   K   +FP T   
Sbjct: 251 NLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLRTDGVMGEYEPKIEVHFPYTVTT 310

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           A   G  +++EC A G PVP+ +W +   P P  A       +L IPNV++ED G Y C+
Sbjct: 311 A--KGSTIKMECFALGNPVPTISWRKVNGPNPSKARLRKSQAVLEIPNVQLEDAGTYECK 368

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           A N R        + +   P++T  L D  +D+   L W C+A G P  TY W +NG   
Sbjct: 369 AENSRGRNVFRGQLQVYTYPHWTERLNDTQLDSGDQLRWECKAIGKPRPTYRWLKNG--- 425

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
               +PL  + R  + + VL I  +N + D  MYQC A+N+    Y+SA+LR+L   P+F
Sbjct: 426 ----VPLWPESRIEMVNGVLMIHSVN-QSDAGMYQCVAENKHGAIYTSAELRILASAPTF 480

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
               L+      +G  V + C P+A+PKP   WKK    +    R  +  +G+L I   +
Sbjct: 481 PASHLKKTIIITKGQEVAVECKPQASPKPTISWKKGDKALRENKRITVLPDGSLRILNAT 540

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           + D G Y C   NV G  E    + V   P+  +  P +  +    ++ L C A  +  L
Sbjct: 541 KSDEGKYVCRGENVFGSAEITASVFVKE-PTRIDLSPKRTELTVGESIVLSCKALHDPSL 599

Query: 710 DVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           DV + WT NG  I    +    E+  + +    L I N     AG Y C V++T   IS 
Sbjct: 600 DVIFHWTLNGQPIDFEKEGGHFESIRVQVSSADLMIRNILLMHAGRYGCRVQTTADSISD 659

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
           +  ++V GPPG PG V V E+ +T+AT+ WT GA N  PIT Y + AR+ ++  W  V  
Sbjct: 660 EAELLVRGPPGPPGVVIVEEITETTATLSWTPGADNHSPITSYNLQARSPFSLGWQTV-- 717

Query: 829 HVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
               K V +  +G  E+++   L PW  YEF+V+A N++G G+PS+PS    T    P  
Sbjct: 718 ----KTVPETISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTKEAVPKT 773

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
           AP+ + G  G+  +L I+WEP+  E QN     Y + +R  N T    E +    +    
Sbjct: 774 APANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKF 832

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + R  S    T +EVKV   N+ G GP S +
Sbjct: 833 IYRDESVPPLTPFEVKVGVYNNKGDGPFSPI 863


>gi|301760363|ref|XP_002915992.1| PREDICTED: contactin-4-like [Ailuropoda melanoleuca]
          Length = 1110

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 272/826 (32%), Positives = 411/826 (49%), Gaps = 37/826 (4%)

Query: 156 ICEASIQKLHYLLNDDRTYQYGMDIE-NPDKIPRGPYFIKQPTDVVFDLSKRSILNDITL 214
           + +A    L   LN         ++E   D    GP FI++P+ V+F L+       + L
Sbjct: 76  LLKARTTDLRLKLNKTEAQHVRAEVEVRDDYTLHGPVFIQEPSHVMFPLNSEE--KKVKL 133

Query: 215 SCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHC 274
           +C   G P P   W        +L    +D   D R+++  G+L+IN+P + +D G+Y C
Sbjct: 134 NCEVKGNPKPHIRW--------KLNGTDVDIGVDFRYSVVEGSLLINNPNKTQDAGTYQC 185

Query: 275 KASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARD 333
            A+N FG+++S   +L F ++  F  +    +   Q  G  + C PP +   ++Y W  +
Sbjct: 186 IATNSFGTVVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFN 245

Query: 334 YFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392
            +P++  +D R FVS + G LY + +E+ D GNY+C V + V++    GP  PL +    
Sbjct: 246 EYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDG 303

Query: 393 NFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENF 449
              +   K   +FP+  P A   G  VRLEC A G PVP+  W R  G P+ R A     
Sbjct: 304 VMGEYEPKIEVHFPEMVPTA--KGTTVRLECFALGNPVPTIIWRRADGKPIARKARRHKS 361

Query: 450 NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWT 509
           N IL IPN + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W 
Sbjct: 362 NGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEENVFWE 421

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
           C+A G P  TY W +NGE       PL  +DR  I+   L I  +N   D  MYQC A+N
Sbjct: 422 CKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVAEN 473

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 629
           +    +SSA+L V+ + P F +  L+  T    GG V I C P+A+PKP + WKK  +I+
Sbjct: 474 KHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDIL 533

Query: 630 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
               R  I E+G+L I  V++ D+G Y+C ATN  G   S G L+V   P+     P  +
Sbjct: 534 RENERITISEDGSLKIVNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSM 592

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNAS 748
            +    ++ L C    +  LD+ + W+ NG  I  + D +  E    +  G L+ I N  
Sbjct: 593 DVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGDSAGDLM-IRNIQ 651

Query: 749 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
              AG+Y C+V+++V K+S    +IV GPPG P  V + E+  T+A + W  G  N  PI
Sbjct: 652 LKHAGKYICMVQTSVDKLSAGADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPI 711

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y I ART ++  W  V  + + + +D   G+   +    L PW  YEF+ +A N +G 
Sbjct: 712 TMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGI 766

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           GEPS PS +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R  
Sbjct: 767 GEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPY 826

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
               +    L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 827 GKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGP 871



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 147/646 (22%), Positives = 231/646 (35%), Gaps = 53/646 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 362 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAIEE 416

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 417 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 470

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 471 AENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 530

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           ++L       E++     +D  L I  +  + D   Y C A N   T  S+  L V+   
Sbjct: 531 DILR------ENERITISEDGSLKIVNVT-KSDAGSYTCIATNHFGTASSTGNL-VVKDP 582

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------ 640
                 P   +   GE   +      + +    F W  +G++I        FE       
Sbjct: 583 TRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGDSA 642

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G+L+I  +    +G Y C          +   LIV   P   E +           L  R
Sbjct: 643 GDLMIRNIQLKHAGKYICMVQTSVDKLSAGADLIVRGPPGPPEAVTIDEITDTTAQLSWR 702

Query: 701 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CV 758
                   + +  I       +G   +N +  P + IDG     T        EYE   V
Sbjct: 703 PGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFRTV 759

Query: 759 VKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITH 810
             + +G     + S K       P   P  V      K+   I W    +   NGR    
Sbjct: 760 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF-G 818

Query: 811 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
           Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G G 
Sbjct: 819 YVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG- 870

Query: 871 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930
           P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + +D
Sbjct: 871 PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRHDD 929

Query: 931 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 930 KEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTGPSS 973


>gi|194221125|ref|XP_001915937.1| PREDICTED: contactin-4 isoform 1 [Equus caballus]
          Length = 1026

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 269/794 (33%), Positives = 398/794 (50%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P+ V+F L        + L+C   G P P   W        +L    +D   D
Sbjct: 25  GPIFIQEPSHVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RQGQGMVLLCGPPAHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P A   G  V+LEC A 
Sbjct: 193 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE L +       Q+R  
Sbjct: 311 TFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGEALLT-------QERIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+ L P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIALGPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP + WKK  +I+    R  I E+G+L I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPKPVYTWKKGRDILRENERISISEDGSLRIVNVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ NG  I 
Sbjct: 483 FGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V++TV K+S    +IV GPPG P 
Sbjct: 542 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   +  +EV
Sbjct: 717 VITWETVPEELQNGRGFGYVVAFRPYGKIIWMLTVLAS-ADASRYVFRNESVRPFFPFEV 775

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 776 KVGVFNNKGEGPFS 789



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 145/648 (22%), Positives = 232/648 (35%), Gaps = 56/648 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAIEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G  L      +     L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEALLTQERIQIEQGTLNITIVNLSDAGMYQCV 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSSAELSVIALGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L        + +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DIL-------RENERISISEDG-SLRIVNVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 497 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+  +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKIIWMLTV--LASADASRYVFRNES-----VRPFFPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PIEKNRGRIQGYEVKYWRH 843

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 DDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTGPSS 889


>gi|355559495|gb|EHH16223.1| Brain-derived immunoglobulin superfamily protein 2 [Macaca mulatta]
 gi|355746563|gb|EHH51177.1| Brain-derived immunoglobulin superfamily protein 2 [Macaca
           fascicularis]
          Length = 1026

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 267/799 (33%), Positives = 400/799 (50%), Gaps = 35/799 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DIGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 ARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGE-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T
Sbjct: 359 RDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRIT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTC 477

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 478 IATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GP
Sbjct: 537 GHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 596

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D 
Sbjct: 597 PGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID- 653

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 654 --GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGG 711

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +    L    +    V R  S   +
Sbjct: 712 SKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPF 770

Query: 958 TEYEVKVQAINDVGPGPES 976
           + +EVKV   N+ G GP S
Sbjct: 771 SPFEVKVGVFNNKGEGPFS 789



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 148/649 (22%), Positives = 235/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCL 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSNAELSVIAVGPDFSRTLLKRITLVKVGGEVVIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 497 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 843

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 E-DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 889


>gi|281346450|gb|EFB22034.1| hypothetical protein PANDA_004020 [Ailuropoda melanoleuca]
          Length = 1021

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 267/794 (33%), Positives = 400/794 (50%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P+ V+F L+       + L+C   G P P   W        +L    +D   D
Sbjct: 20  GPVFIQEPSHVMFPLNSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDVDIGVD 69

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+++S   +L F ++  F  +    +  
Sbjct: 70  FRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTVVSREAKLQFAYLENFKTRTRSTVSV 129

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 130 RQGQGMVLLCGPPAHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 187

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K   +FP+  P A   G  VRLEC A 
Sbjct: 188 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPEMVPTA--KGTTVRLECFAL 245

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 246 GNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQL 305

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  +DR  
Sbjct: 306 TFYAQPNWIQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQ 358

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+ + P F +  L+  T    G
Sbjct: 359 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVG 417

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP + WKK  +I+    R  I E+G+L I  V++ D+G Y+C ATN 
Sbjct: 418 GEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLKIVNVTKSDAGSYTCIATNH 477

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ NG  I 
Sbjct: 478 FGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLID 536

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 537 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDKLSAGADLIVRGPPGPPE 596

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 597 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 651

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 652 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 711

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 712 VITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEV 770

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 771 KVGVFNNKGEGPFS 784



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 147/647 (22%), Positives = 231/647 (35%), Gaps = 54/647 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 272 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAIEE 326

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 327 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 380

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 381 AENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 440

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           ++L       E++     +D  L I  +  + D   Y C A N   T  S+  L V+   
Sbjct: 441 DILR------ENERITISEDGSLKIVNVT-KSDAGSYTCIATNHFGTASSTGNL-VVKDP 492

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------ 640
                 P   +   GE   +      + +    F W  +G++I        FE       
Sbjct: 493 TRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDS 552

Query: 641 -GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+L+I  +    +G Y C          +   LIV   P   E +           L  
Sbjct: 553 AGDLMIRNIQLKHAGKYICMVQTSVDKLSAGADLIVRGPPGPPEAVTIDEITDTTAQLSW 612

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
           R        + +  I       +G   +N +  P + IDG     T        EYE   
Sbjct: 613 RPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFRT 669

Query: 758 VVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPIT 809
           V  + +G     + S K       P   P  V      K+   I W    +   NGR   
Sbjct: 670 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF- 728

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G G
Sbjct: 729 GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG 781

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + +
Sbjct: 782 -PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRHD 839

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 840 DKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTGPSS 884


>gi|348575437|ref|XP_003473495.1| PREDICTED: LOW QUALITY PROTEIN: contactin-4-like [Cavia porcellus]
          Length = 1026

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 269/794 (33%), Positives = 396/794 (49%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P  V+F L        + L+C   G P P   W        +L    +D   D
Sbjct: 25  GPIFIQEPNHVMFPLDSED--KKVKLNCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R++L  G+L+IN+P + +D G+Y C ASN FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSLVEGSLLINNPNKTQDTGTYQCIASNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K   +FP+T P A   G  V+LEC A 
Sbjct: 193 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPETVPTA--KGATVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTIAWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+A G P  TY W +NGE       PL  +DR  
Sbjct: 311 TFYAQPNWIQKINDIHVAMEEKVFWECKANGKPKPTYRWLKNGE-------PLLTRDRIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+   P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIGECPDFSRTXLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N   I 
Sbjct: 483 FGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNEHLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            N D +  E        G L I N     AG+Y C+V+++V ++S    +IV GPPG P 
Sbjct: 542 FNKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 717 VITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEV 775

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 776 KVGVFNNKGEGPFS 789



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 148/649 (22%), Positives = 233/649 (35%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                 KV  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 332 ------KVFWECKANGKPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 385

Query: 470 ASNDRSALESSVTISIQAE-PNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+  E P+F+     +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSSAELSVIGECPDFSRTXLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  + ++I        FE      
Sbjct: 497 PTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNEHLIDFNKDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRK 927
           G P SP+    +  ++P + P+ I        D+ + W  PL + +        K +WR 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPLGKNRGRIQGYEVK-YWRH 843

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            ND E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 -NDKEENARKIRTVGNQ--TSTKITNLQGSALYHLAVKAYNSAGTGPSS 889


>gi|213982949|ref|NP_001135636.1| contactin 4 precursor [Xenopus (Silurana) tropicalis]
 gi|197246317|gb|AAI68488.1| Unknown (protein for MGC:172944) [Xenopus (Silurana) tropicalis]
          Length = 1028

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 266/795 (33%), Positives = 393/795 (49%), Gaps = 33/795 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F ++P ++ F L        + L C   G+P P   W        R+   L+D   
Sbjct: 23  QGPVFTQEPPNINFPLDSED--RTLRLVCEVQGHPKPVVRW--------RVNGTLMDEAQ 72

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           D R+ +   +LII  P +  D G++ C+A+N  G+I+S    + F ++  F  +    + 
Sbjct: 73  DYRYRVLDRSLIIASPDRNRDVGTFQCEATNSLGTILSREAYVQFSYLDSFQTRTRSTVS 132

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGN 365
             +  G  + C PP +   + Y W  + +P FV++D R FVS   G LY + +E  DAGN
Sbjct: 133 VREGQGMVLLCGPPAHSGELVYAWIFNEYPPFVQQDNRRFVSQVTGNLYIAKVEPSDAGN 192

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V + V++T   GP  PL +       +   K   +FP++ P A   G  V+LEC A
Sbjct: 193 YTCVVTNTVTNTRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVPSA--KGSTVKLECFA 250

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP+  W R  G P+ R       + +L IPN + ED G Y C A N R        
Sbjct: 251 LGNPVPTITWRRADGKPISRKVRRHRSSGVLEIPNFQQEDAGPYECVAENTRGKNMVRGQ 310

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A P +   + D H+  + ++ W C+A G P  +Y+W +NG+ L S       + R 
Sbjct: 311 LTYFAPPTWVQKINDAHIAIEENILWECKASGRPKASYTWLKNGQRLQS-------KGRL 363

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I    LTI  +N   D  MYQC A+N+  T YSSA+LRV+ + P F K  ++  T    
Sbjct: 364 QIDHGSLTITSVNIS-DSGMYQCLAENKHGTIYSSAELRVIAVGPDFSKGFVKRVTLGKV 422

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+V I C P+A+PKP   WKK   +     R  I ++G L IS +++ D+G Y+CTA+N
Sbjct: 423 GGSVLIECKPKASPKPSITWKKGKELQRESSRISILDDGTLKISNLTKADAGSYTCTASN 482

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G   S G L+V   P+     P  + +    ++ L C    +  LD+++ W  NG  I
Sbjct: 483 HFGTASSTGTLVV-KDPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQLI 541

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D    E        G L I +     AG+Y C+V ++V K+S    +IV GPPG P
Sbjct: 542 DFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             + V E+  T+A + W  G  N  PI  Y + ART ++  W  VS   + + VD   GR
Sbjct: 602 DALTVEEITDTTAQLSWMPGVDNHSPIIMYSVQARTPFSVGWQAVS--TVPEVVD---GR 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+VIA NE+G GEPS PS +  T    P   P+ + GGGG  G+
Sbjct: 657 SFTATVVGLSPWVEYEFRVIAINEIGIGEPSPPSDKRRTEEALPEVTPANVSGGGGSKGE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+WEP+P E QN     Y + +R      +  +T+    +    V R  S   ++ YE
Sbjct: 717 LVITWEPVPEELQNGGGFGYVVAFRPFGTISWM-QTVVASADSSRYVYRNESLPPFSPYE 775

Query: 962 VKVQAINDVGPGPES 976
           VKV   N+ G GP S
Sbjct: 776 VKVGVYNNRGEGPFS 790



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 144/649 (22%), Positives = 225/649 (34%), Gaps = 59/649 (9%)

Query: 351 GALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407
           G L     +Q DAG Y C   N + K    G+   F P       N   +    N     
Sbjct: 279 GVLEIPNFQQEDAGPYECVAENTRGKNMVRGQLTYFAPPTWVQKINDAHIAIEEN----- 333

Query: 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYI 467
                    +  EC A G P  SY W + G  L      +  +  LTI +V + D G Y 
Sbjct: 334 ---------ILWECKASGRPKASYTWLKNGQRLQSKGRLQIDHGSLTITSVNISDSGMYQ 384

Query: 468 CRASNDRSALESSVTISIQA-EPNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFR 524
           C A N    + SS  + + A  P+F+     +    +    +   C+    P  + +W +
Sbjct: 385 CLAENKHGTIYSSAELRVIAVGPDFSKGFVKRVTLGKVGGSVLIECKPKASPKPSITWKK 444

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
             EL        E      + D  L I  L  + D   Y C A N   T  S+  L V+ 
Sbjct: 445 GKELQR------ESSRISILDDGTLKISNLT-KADAGSYTCTASNHFGTASSTGTL-VVK 496

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---- 640
                   P   +   GE   +    + + +    F W  +G +I      + FE     
Sbjct: 497 DPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQLIDFQKDGEHFERVGGQ 556

Query: 641 ---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
              G+L+I  +    +G Y C          +   LIV   P   + L  +        L
Sbjct: 557 DSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGPPDALTVEEITDTTAQL 616

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
                      + +  +       +G   ++ +  P + +DG     T    +   EYE 
Sbjct: 617 SWMPGVDNHSPIIMYSVQARTPFSVGWQAVSTV--PEV-VDGRSFTATVVGLSPWVEYEF 673

Query: 758 VVKST----VGKIS---TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP 807
            V +     +G+ S    K       P   P  V      K    I W    +   NG  
Sbjct: 674 RVIAINEIGIGEPSPPSDKRRTEEALPEVTPANVSGGGGSKGELVITWEPVPEELQNGGG 733

Query: 808 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
              Y +  R     +W      V   +  RY  R E+     L P+S YE KV   N  G
Sbjct: 734 F-GYVVAFRPFGTISWMQTV--VASADSSRYVYRNES-----LPPFSPYEVKVGVYNNRG 785

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            G P SP     +  ++P +AP+ +        D+ +SW  +P          Y++ + K
Sbjct: 786 EG-PFSPLTVVYSAEEEPGRAPAGVFSRSLTAWDIEVSWIAVPGSLSKGRIQGYEVRYWK 844

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +N+ E  +  L+  GN      ++     +T Y + V+A N  G GP S
Sbjct: 845 QNEKEQNARKLRTLGNQ--TSTKLSHLQGHTLYHLNVRAYNSAGTGPAS 891


>gi|157909807|ref|NP_001103219.1| contactin-4 isoform 1 precursor [Mus musculus]
 gi|55976372|sp|Q69Z26.2|CNTN4_MOUSE RecName: Full=Contactin-4; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 2; Short=BIG-2;
           Flags: Precursor
          Length = 1026

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 263/794 (33%), Positives = 392/794 (49%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        ++    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KINGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P   + G  V+LEC A 
Sbjct: 193 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  +DR  
Sbjct: 311 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLTRDRIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+   P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+P+P + W+K   I+    R  I E+GNL I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G +IV   P+     P  + +    ++ L C    +  LD+ + WT NG  I 
Sbjct: 483 FGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 542 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W       +    D   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 717 VITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEV 775

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 776 KVGVFNNKGEGPFS 789



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 148/649 (22%), Positives = 239/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG+Y C  ++     G+N     L  +   N+ Q+   N+      E
Sbjct: 277 NGILEIPNFQQEDAGSYECVAEN---SRGKNVAKGQLTFYAQPNWVQII--NDIHVAMEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           +      V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 332 S------VFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 385

Query: 470 ASNDRSALESSVTISIQAE-PNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ AE P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           E+L        + +R  I ++   +R +N  + D   Y C A N   T  S+    V+  
Sbjct: 446 EIL-------RENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGN--VIVK 495

Query: 586 KPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---- 640
            P+    P  S +   GE   +      + +    F W  +G++I        FE     
Sbjct: 496 DPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQ 555

Query: 641 ---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
              G+L+I  +    +G Y C              LIV   P   E +           L
Sbjct: 556 DSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQL 615

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE- 756
             R        + +  I       +G   +N +  P++ +DG     T        EYE 
Sbjct: 616 SWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PDL-VDGKTFTATVVGLNPWVEYEF 672

Query: 757 -CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP 807
             V  + +G     + S K       P   P  V      K+   I W    +   NGR 
Sbjct: 673 RTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRG 732

Query: 808 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
              Y +  R +    W      +   +  RY  R E+     + P+S +E KV   N  G
Sbjct: 733 F-GYVVAFRPHGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKG 784

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            G P SP+    +  ++P + P+ I        D+ + W     + +     Y   +WR 
Sbjct: 785 EG-PFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPIGKNRGRIQGYEVKYWRH 843

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +D E  ++ ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 -DDKEENAKKIRTVGNQ--TSTKITNLKGSALYHLSVKAYNSAGTGPSS 889


>gi|148228227|ref|NP_001085050.1| contactin 4 precursor [Xenopus laevis]
 gi|47940323|gb|AAH72368.1| MGC84491 protein [Xenopus laevis]
          Length = 1028

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 265/797 (33%), Positives = 399/797 (50%), Gaps = 33/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F ++PT++ F L        + L C   G+P P   W        R+   L+D   
Sbjct: 23  QGPVFAQEPTNINFPLDSED--RTLRLVCDVQGHPKPVVRW--------RVNGTLMDEAQ 72

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           D R+ +   +LII  P +  D G++ C+A+N  G+I+S    + F ++  F  +    + 
Sbjct: 73  DYRYRVLDRSLIIASPDRNRDVGTFQCEATNSLGTILSREAYVQFSYLDSFQTRTRSTVS 132

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGN 365
             +  G  + C PP +   + Y W  + +P FV++D R FVS   G LY + +E  DAGN
Sbjct: 133 VREGQGMVLLCGPPAHSGELVYAWIFNEYPPFVQQDNRRFVSQVTGNLYIAKVEPSDAGN 192

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V + +++T   GP  PL +       +   K   +FP++   A   G  V+LEC A
Sbjct: 193 YTCVVTNIITNTRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVSSA--KGSTVKLECFA 250

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP+  W R  G P+ R       + +L IPN + ED G Y C A N R        
Sbjct: 251 LGNPVPTITWRRADGKPISRKVRRHRSSGVLEIPNFQQEDAGPYECVAENTRGKNMVRGQ 310

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A P++   + D H+  + ++ W C+A G P  +Y+W +NG+ L S       + R 
Sbjct: 311 LTYFAPPSWVQKINDAHIAIEENILWECKASGRPKPSYTWLKNGQRLQS-------KGRL 363

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I    LTI  +N   D  MYQC A+N+  T YSSA+LRV+ + P F K  ++  T    
Sbjct: 364 QIDHGSLTITSVNIS-DSGMYQCLAENKHGTIYSSAELRVIAVGPDFSKGFVKRVTLGKV 422

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+V I C P+A+PKP   WKK   ++    R  I ++G L IS +++ D+G Y+CTA+N
Sbjct: 423 GGSVLIECKPKASPKPSTTWKKGKELLKESPRISILDDGTLKISNLTKADAGSYTCTASN 482

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G   S G L+V   P+     P  + +    ++ L C    +  LD+++ W  NG  I
Sbjct: 483 HFGTASSTGTLVV-KDPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQLI 541

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D    E        G L I +     AG+Y C+V ++V K+S    +IV GPPG P
Sbjct: 542 DFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             + V  + +T+A + W  G  N  PI  Y + ART ++  W  VS   + + VD   G+
Sbjct: 602 DALTVEVIAETTAQLSWMPGVDNHSPIIMYSVQARTPFSVGWQAVS--TVPEVVD---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
             +S  N L PW  YEF+VIA NE+G GEPS PS +  T    P   P+ + GGGG  G+
Sbjct: 657 SFSSTVNGLSPWVEYEFRVIAINEIGIGEPSPPSDRRRTKDALPEVTPANVSGGGGSKGE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+WEP+P E QN     Y + +R      +  +T+    +    V R  S   ++ YE
Sbjct: 717 LVITWEPVPEELQNGGGFGYVVAFRPFGTISWM-QTVVASADSSRYVYRNESLPPFSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S++
Sbjct: 776 VKVGVYNNKGEGPFSQL 792



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 145/653 (22%), Positives = 231/653 (35%), Gaps = 67/653 (10%)

Query: 351 GALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407
           G L     +Q DAG Y C   N + K    G+   F P       N   +    N     
Sbjct: 279 GVLEIPNFQQEDAGPYECVAENTRGKNMVRGQLTYFAPPSWVQKINDAHIAIEEN----- 333

Query: 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYI 467
                    +  EC A G P PSY W + G  L      +  +  LTI +V + D G Y 
Sbjct: 334 ---------ILWECKASGRPKPSYTWLKNGQRLQSKGRLQIDHGSLTITSVNISDSGMYQ 384

Query: 468 CRASNDRSALESSVTISIQA-EPNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFR 524
           C A N    + SS  + + A  P+F+     +    +    +   C+    P  + +W +
Sbjct: 385 CLAENKHGTIYSSAELRVIAVGPDFSKGFVKRVTLGKVGGSVLIECKPKASPKPSTTWKK 444

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
             ELL       E      + D  L I  L  + D   Y C A N   T  S+  L V+ 
Sbjct: 445 GKELLK------ESPRISILDDGTLKISNLT-KADAGSYTCTASNHFGTASSTGTL-VVK 496

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---- 640
                   P   +   GE   +    + + +    F W  +G +I      + FE     
Sbjct: 497 DPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQLIDFQKDGEHFERVGGQ 556

Query: 641 ---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
              G+L+I  +    +G Y C          +   LIV   P   + L  ++       L
Sbjct: 557 DSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGPPDALTVEVIAETTAQL 616

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
                      + +  +       +G   ++ +  P + +DG     T    +   EYE 
Sbjct: 617 SWMPGVDNHSPIIMYSVQARTPFSVGWQAVSTV--PEV-VDGKSFSSTVNGLSPWVEYEF 673

Query: 758 VVKST----VGKIS-------TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGAT 803
            V +     +G+ S       TK  +    P  + GG       K    I W    +   
Sbjct: 674 RVIAINEIGIGEPSPPSDRRRTKDALPEVTPANVSGGGG----SKGELVITWEPVPEELQ 729

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           NG     Y +  R     +W      V   +  RY  R E+     L P+S YE KV   
Sbjct: 730 NGGGF-GYVVAFRPFGTISWMQTV--VASADSSRYVYRNES-----LPPFSPYEVKVGVY 781

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N  G G  S  +  Y+   ++P +AP+ +        D+ +SW  +P          Y++
Sbjct: 782 NNKGEGPFSQLTVVYSA-EEEPGRAPAGVFSRSLTAWDIEVSWIAVPGSLSKGRIQGYEV 840

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            + K+N+ E  +  L+  GN      ++     +T Y + ++A N  G GP S
Sbjct: 841 RYWKQNEKEQNARKLRTLGNQ--TSTKLSHLQGHTLYHLNIRAYNSAGTGPAS 891


>gi|117938277|ref|NP_032805.2| contactin-3 precursor [Mus musculus]
 gi|408360027|sp|Q07409.2|CNTN3_MOUSE RecName: Full=Contactin-3; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 1; Short=BIG-1;
           AltName: Full=Plasmacytoma-associated neuronal
           glycoprotein; Flags: Precursor
 gi|146327723|gb|AAI41427.1| Contactin 3 [synthetic construct]
 gi|148666969|gb|EDK99385.1| contactin 3 [Mus musculus]
          Length = 1028

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 268/797 (33%), Positives = 396/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVDSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDTSL 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           D R+ L+GGNLI+ +P +  D GSY C A+N  G+I+S   +L F ++  F  +    + 
Sbjct: 74  DHRYKLNGGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++T   G   PL +       +   K    FP+T P A   G  VRLEC A
Sbjct: 194 YTCVVTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVRLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P P       FN +L I N + ED G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGMPFPNKIKLRKFNGMLEIQNFQQEDTGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P +   L D  +  +  L W C A G P  +Y W +NG+ L  E       +R 
Sbjct: 312 LTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKNGDALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F + P++       
Sbjct: 365 QIENGALTITNLN-VTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNPMKKMVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P+    WKK   ++    R     +G L I  V++ D+G Y+CTA N
Sbjct: 424 GSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + +A   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALT 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + WT+G  +  P+  Y + ART ++  W +V    + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSV--RTVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+++A N++G GEPS PS +  T    P  APS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +    +    N    V R  S   ++ YE
Sbjct: 717 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 165/679 (24%), Positives = 254/679 (37%), Gaps = 93/679 (13%)

Query: 335 FPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF 394
           FPN ++  K     ++G L     +Q D G+Y C  ++     G+N     L  +    +
Sbjct: 269 FPNKIKLRK-----FNGMLEIQNFQQEDTGSYECIAEN---SRGKNVARGRLTYYAKPYW 320

Query: 395 QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILT 454
            QL                 D +  EC A G P PSY W + G  L      +  N  LT
Sbjct: 321 LQLLRDVEI--------AVEDSLYWECRASGKPKPSYRWLKNGDALVLEERIQIENGALT 372

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCE 511
           I N+ V D G + C A N    + SS  + + A  P+F+     K +  Q    +   C+
Sbjct: 373 ITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCK 432

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQ 570
               P    S+++ G+++      + +Q R  F+ D  L I  +  + D   Y C A+NQ
Sbjct: 433 PRASPRA-LSFWKKGDMM------VREQARVSFLNDGGLKIMNVT-KADAGTYTCTAENQ 484

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW------ 622
                 +  L V+T        P   +   GE  +V + C  +  P     F W      
Sbjct: 485 FGKANGTTHL-VVTEPTRIILAPSNMDVAVGE--SVILPCQVQHDPLLDIMFAWYFNGAL 541

Query: 623 ---KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
              KKDG+     G      +G+L+I  +    SG Y C          S   LIV   P
Sbjct: 542 TDFKKDGSHFEKVGGSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSP 598

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINI 737
              E +  K+        QL  +  T+    V    +       +G   +  +  P + I
Sbjct: 599 GPPENV--KVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSVRTV--PEV-I 653

Query: 738 DGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQV 786
           DG     T        EYE   V  + +G         K+ T+       P  + GG   
Sbjct: 654 DGKTHTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGG- 712

Query: 787 VEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
               ++   I W        +G   G  +  ++ +  T W      +   V   +  RY 
Sbjct: 713 ---SRSELVITWDPVPEELQNGGGFGY-VVAFRPLGVTTW------IQTVVTSPDNPRYV 762

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
            R E+     +VP+S YE KV   N  G G P SP     +  ++P  APS I       
Sbjct: 763 FRNES-----IVPFSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSHISAHSLSS 816

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YY 957
            ++ +SW  +P +  N   + Y++ +      E  S  +K  GN   AV+R + S   YY
Sbjct: 817 SEIEVSWNTIPWKLSNGHLLGYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYY 876

Query: 958 TEYEVKVQAINDVGPGPES 976
           T     V+A N  G GP S
Sbjct: 877 T----AVRAYNSAGAGPFS 891


>gi|410951600|ref|XP_003982482.1| PREDICTED: contactin-4, partial [Felis catus]
          Length = 1021

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 265/794 (33%), Positives = 399/794 (50%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P+ V+F L+       + L+C   G P P   W        +L    +D   D
Sbjct: 20  GPVFIQEPSHVMFPLNSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDVDIGVD 69

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 70  FRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 129

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 130 RQGQGMVLLCGPPAHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 187

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+  P A   G  V+LEC A 
Sbjct: 188 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPEMVPTA--KGTTVKLECFAL 245

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     + IL IPN + ED G Y C A N R    +   +
Sbjct: 246 GNPVPTIIWRRADGKPIARKARRHKSSGILEIPNFQQEDAGLYECVAENSRGKNVARGQL 305

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  +DR  
Sbjct: 306 TFYAQPNWIQEINDTHVAIEENVFWECKANGRPKPTYRWLKNGE-------PLFTRDRIQ 358

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+  +L I  +N   D  MYQC A+N+    +SSA+L V+   P F +  L+  T    G
Sbjct: 359 IEQGMLNITVVNLS-DAGMYQCVAENKHGVIFSSAELSVIAAGPDFSRTLLKRVTLVKVG 417

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP + WKK  +I+    R  I E+G+L I  V++ D+G Y+C ATN 
Sbjct: 418 GEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLRIVNVTKSDAGSYTCVATNH 477

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ NG  I 
Sbjct: 478 FGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLID 536

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GPPG P 
Sbjct: 537 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPE 596

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 597 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 651

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 652 FTAAVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 711

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 712 VITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEV 770

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 771 KVGVFNNKGEGPFS 784



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 145/647 (22%), Positives = 232/647 (35%), Gaps = 56/647 (8%)

Query: 351 GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA 410
           G L     +Q DAG Y C  ++     G+N     L  +   N+ Q     +        
Sbjct: 273 GILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQEINDTHV------- 322

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
               + V  EC A G P P+Y W + G PL      +    +L I  V + D G Y C A
Sbjct: 323 -AIEENVFWECKANGRPKPTYRWLKNGEPLFTRDRIQIEQGMLNITVVNLSDAGMYQCVA 381

Query: 471 SNDRSALESSVTIS-IQAEPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
            N    + SS  +S I A P+F+  L  +   +    ++   C+    P   Y+W +  +
Sbjct: 382 ENKHGVIFSSAELSVIAAGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRD 441

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           +L        + +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+   
Sbjct: 442 IL-------RENERITISEDG-SLRIVNVTKSDAGSYTCVATNHFGTASSTGNL-VVKDP 492

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------ 640
                 P   +   GE   +      + +    F W  +G++I        FE       
Sbjct: 493 TRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDS 552

Query: 641 -GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+L+I  +    +G Y C          +   LIV   P   E +           L  
Sbjct: 553 AGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSW 612

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
           R        + +  I       +G   +N +  P + IDG              EYE   
Sbjct: 613 RPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTAAVVGLNPWVEYEFRT 669

Query: 758 VVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPIT 809
           V  + +G     + S K       P   P  V      K+   I W    +   NGR   
Sbjct: 670 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF- 728

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G G
Sbjct: 729 GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG 781

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + +
Sbjct: 782 -PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRHD 839

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 840 DKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTGPSS 884


>gi|345323035|ref|XP_003430665.1| PREDICTED: contactin-5 [Ornithorhynchus anatinus]
          Length = 1023

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 268/801 (33%), Positives = 392/801 (48%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P DVVF     S    + L C A G P P+Y W +            I
Sbjct: 16  ESVDYGPVFVQEPDDVVFPAD--SDEKKVALDCEARGDPAPNYRWLRN--------GTEI 65

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-R 302
           D  SD R++L  GN II+ P + +D GSY C ASN FGSI+S    L F ++  F+ + R
Sbjct: 66  DLESDYRYSLIEGNFIISSPSEAKDSGSYQCLASNTFGSILSREAILQFAYLRNFSGRTR 125

Query: 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
           +     +  G  + C PP + P ++Y W  + FP+FV ED R F+S D G LY S ++  
Sbjct: 126 SAVSVREGQGVVLICSPPPHSPEISYSWVFNEFPSFVAEDSRRFISQDTGNLYISKVQAA 185

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP  F      G  V++
Sbjct: 186 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFP--FMVTAAKGTTVKM 243

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+ +W +    +P  A       +L IPNV+++D G Y CRA N R     
Sbjct: 244 ECFALGNPVPTISWVKVNGYIPSKARLRKSQGVLEIPNVQLDDAGMYECRAENSRGRNSF 303

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + +   P++   L D H+D+ + L W C+A G P  T  W +NG       LPL  Q
Sbjct: 304 RGQLQVFTYPHWVERLNDTHLDSGSPLRWECKAIGKPRPTVRWLKNG-------LPLWPQ 356

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
               + + +L I  +N + D  MYQC A+N+  T Y++A+L++L   P+F    L+    
Sbjct: 357 SGIEMVNGILMIHNVN-QSDAGMYQCLAENKYGTIYANAELKILASAPTFALNQLKQTIV 415

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             +G  V I C P+A+PKP   WKK    +    R  +  +G+L I   S+ D G Y C 
Sbjct: 416 ITKGQEVIIECKPQASPKPTISWKKGDKAVRESKRTAVLPDGSLRILNASKYDEGKYICQ 475

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
             NV G  E    + V   P+  E  P +  +    ++ L C A  +  LDV + WT  G
Sbjct: 476 GENVFGSAEFIASVFVKE-PTRIELAPKRTELTVGESIVLSCKAIHDPSLDVTFYWTLKG 534

Query: 720 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I    D    E+         L I N     AG Y C V++T   +S +  ++V GPP
Sbjct: 535 QPIDFEKDGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPP 594

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DR 837
           G PG V V E+ + +AT+ W+ GA N  PIT Y + AR+ ++  W  V      K V D 
Sbjct: 595 GSPGIVIVEEITENTATLSWSPGADNHSPITAYNLQARSPFSLGWQTV------KTVPDV 648

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G
Sbjct: 649 ITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSAPSRMIRTNEAVPKTAPANVSGRSG 708

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           +  +L I+WEP+  E QN     Y + +R  N T    E +    +    + R  S    
Sbjct: 709 RRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPL 767

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           T +EVKV   N+ G GP S +
Sbjct: 768 TPFEVKVGVYNNKGDGPFSHI 788


>gi|354473112|ref|XP_003498780.1| PREDICTED: contactin-4 [Cricetulus griseus]
          Length = 1017

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 269/822 (32%), Positives = 404/822 (49%), Gaps = 48/822 (5%)

Query: 161 IQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGG 220
           ++ L  LL+DD T               GP F+++P+ ++F L        + LSC   G
Sbjct: 1   MRTLSLLLSDDYTLH-------------GPVFVQEPSHIMFPLDSEE--KKVKLSCEVKG 45

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKF 280
            P P   W        +L    +D   D R+++  G+L+IN+P + +D G+Y C A+N F
Sbjct: 46  NPKPHIRW--------KLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATNSF 97

Query: 281 GSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV 339
           G+I+S   +L F ++  F  +    +   +  G  + C PP +   ++Y W  + +P++ 
Sbjct: 98  GTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY- 156

Query: 340 EEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL- 397
            +D R FVS + G LY + +E+ D GNY+C V + V++    GP  PL +       +  
Sbjct: 157 -QDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYE 215

Query: 398 -KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTI 455
            K    FP+T P   + G  V+LEC A G PVP+  W R  G P+ R A     + IL I
Sbjct: 216 PKIEVQFPETVPA--EKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSDGILEI 273

Query: 456 PNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV 515
           PN + ED G Y C A N R    +   +   A+PN+   + D H+  +  + W C+A G 
Sbjct: 274 PNFQQEDAGSYECVAENSRGKNIAKGQLIFYAQPNWVQKINDIHVAMEESVFWECKANGR 333

Query: 516 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 575
           P  TY W +NG+       PL  +DR  I+   L I  +N   D  MYQC A+N+    +
Sbjct: 334 PKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVAENKHGVIF 385

Query: 576 SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR 635
           SSA+L V+   P F +  L+  T    GG V I C P+A+P+P + W+K   I+    R 
Sbjct: 386 SSAELSVIAESPDFSRTLLKRVTLVKVGGEVIIECKPKASPRPVYTWRKGREILRENERI 445

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
            I E+GNL I  V++ D+G Y+C ATN  G   S G +IV   P+     P  + +    
Sbjct: 446 TISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIV-KDPTKVMVPPSSMDVTVGE 504

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGE 754
           ++ L C    +  LD+ + W+ NG  I  + D +  E        G L I N     AG+
Sbjct: 505 SIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGK 564

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y C+V+++V K++    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I 
Sbjct: 565 YVCMVQTSVDKLTAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQ 624

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
           ART ++  W  VS   + + VD   G+   +    L PW  YEF+ +A N +G GEPS P
Sbjct: 625 ARTPFSVGWQAVS--TVPELVD---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRP 679

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           S +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      + 
Sbjct: 680 SEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPHGKMIWM 739

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
              L    +    V R  S   ++ +EVKV   N+ G GP S
Sbjct: 740 LTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFS 780



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 148/649 (22%), Positives = 237/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           DG L     +Q DAG+Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 268 DGILEIPNFQQEDAGSYECVAEN---SRGKNIAKGQLIFYAQPNWVQKI--NDIHVAMEE 322

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           +      V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 323 S------VFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 376

Query: 470 ASNDRSALESSVTISIQAE-PNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ AE P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 377 AENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVIIECKPKASPRPVYTWRKGR 436

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           E+L        + +R  I ++   +R +N  + D   Y C A N   T  S+    V+  
Sbjct: 437 EIL-------RENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGN--VIVK 486

Query: 586 KPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---- 640
            P+    P  S +   GE   +      + +    F W  +G++I        FE     
Sbjct: 487 DPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQ 546

Query: 641 ---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
              G+L+I  +    +G Y C          +   LIV   P   E +           L
Sbjct: 547 DSAGDLMIRNIQLKHAGKYVCMVQTSVDKLTAAADLIVRGPPGPPEAVTIDEITDTTAQL 606

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE- 756
             R        + +  I       +G   ++ +  P + +DG     T        EYE 
Sbjct: 607 SWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-VDGKTFTATVVGLNPWVEYEF 663

Query: 757 -CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP 807
             V  + +G     + S K       P   P  V      K+   I W    +   NGR 
Sbjct: 664 RTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRG 723

Query: 808 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
              Y +  R +    W      +   +  RY  R E+     + P+S +E KV   N  G
Sbjct: 724 F-GYVVAFRPHGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKG 775

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            G P SP+    +  ++P + P+ I        D+ + W     + +     Y   +WR 
Sbjct: 776 EG-PFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPIGKNRGRIQGYEVKYWRH 834

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 835 -DDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 880


>gi|359078219|ref|XP_002697014.2| PREDICTED: contactin-4 [Bos taurus]
          Length = 1026

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 265/794 (33%), Positives = 397/794 (50%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 25  GPIFIQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVEGSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLQFAYLENFKPRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RQGQGMVLLCGPPAHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P A   G  V+LEC A 
Sbjct: 193 TCVVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+   A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTIIWRRADGKPIATKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVAKGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN++  + D H+  + ++ W C+A G P  TY W +NGE       PL  +DR  
Sbjct: 311 TFYAQPNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIH 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+ + P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP   WKK  +++    R  I E+G+L I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPKPVHTWKKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  L++ + W+ NG  I 
Sbjct: 483 FGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GPPG P 
Sbjct: 542 FDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 717 VITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEV 775

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 776 KVGVFNNKGEGPFS 789



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 146/648 (22%), Positives = 233/648 (35%), Gaps = 56/648 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVAKGQLTFYAQPNWSQKI--NDIHVAIEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL            L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIHIEQGTLNITIVNLSDAGMYQCV 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   ++W +  
Sbjct: 386 AENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVHTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DVL-------KENERITISEDG-SLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G +I        FE      
Sbjct: 497 PTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRH 843

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 DDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPAS 889


>gi|291394024|ref|XP_002713237.1| PREDICTED: contactin-3-like [Oryctolagus cuniculus]
          Length = 1079

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 268/798 (33%), Positives = 402/798 (50%), Gaps = 35/798 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 25  QGPVFIKEPSNSIFPVDSED--KKITLTCEARGNPSPHYRW--------QLNGSDIDMSM 74

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D GSY C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 75  EHRYKLNGGNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 134

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 135 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 194

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    F +T P A   G  V+LEC A
Sbjct: 195 YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFSETLPAA--KGSTVKLECFA 252

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 253 LGNPVPQINWRRSDGLPFSSKIKLRKFNGVLEIPNFQQEDTGSYECIAENSRGKNVARGR 312

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 313 LTYYAKPHWVQLIRDVEIAVEDNLHWECRASGKPKPSYRWLKNGEALVLE-------ERI 365

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 366 QIENGALTISNLN-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 424

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTAT 661
           G  V + C P A+P+    WK+   ++    R  +  E+G L I+ V++ D+G+Y+CTA 
Sbjct: 425 GSVVNLDCKPRASPRALSSWKRGDTMVQEHDRYWVLPEDGRLKITNVTKADTGMYTCTAE 484

Query: 662 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 721
           N  G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NGV 
Sbjct: 485 NQFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGVL 543

Query: 722 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
                D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG 
Sbjct: 544 TDFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGP 602

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           P  V+VVE+  T+A + W +G  N  PI  Y I ART ++  W  V+   + + +D   G
Sbjct: 603 PENVKVVEITDTTAQLSWEEGTDNHSPIITYSIQARTPFSVGWQAVT--TVPEVID---G 657

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
           +   +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   
Sbjct: 658 KTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRS 717

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           +L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ Y
Sbjct: 718 ELVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPFSPY 776

Query: 961 EVKVQAINDVGPGPESEV 978
           EVKV   N+ G GP S V
Sbjct: 777 EVKVGVYNNRGEGPFSPV 794



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 249/660 (37%), Gaps = 81/660 (12%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q D G+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 279 FNGVLEIPNFQQEDTGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIRDVEI----- 330

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 331 ---AVEDNLHWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 387

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    +   C+    P    SW R 
Sbjct: 388 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSVVNLDCKPRASPRALSSWKRG 447

Query: 526 GELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
             ++       ++ DRY++  +D  L I  +  + D  MY C A+NQ      +  L V+
Sbjct: 448 DTMV-------QEHDRYWVLPEDGRLKITNVT-KADTGMYTCTAENQFGKANGTTHL-VV 498

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW---------KKDGNIIGSG 632
           T        P   +   GE  +V + C  +  P     F W         KKDG+     
Sbjct: 499 TEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGVLTDFKKDGSHFEKV 556

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
           G      +G+L+I  +    SG Y C          S   LIV   P   E +  K+   
Sbjct: 557 GGSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--KVVEI 611

Query: 693 AHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 750
                QL     T+    +    I       +G   +  +  P + IDG     T     
Sbjct: 612 TDTTAQLSWEEGTDNHSPIITYSIQARTPFSVGWQAVTTV--PEV-IDGKTHTATVVELN 668

Query: 751 DAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
              EYE   V  + +G         K+ T+  V    P  + GG       ++   I W 
Sbjct: 669 PWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWD 724

Query: 800 ---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
              +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S Y
Sbjct: 725 PVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPFSPY 776

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           E KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N 
Sbjct: 777 EVKVGVYNNRGEG-PFSPVATVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTVPWKLSNG 835

Query: 917 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
             + Y++ +    + E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 836 HLLGYEVRYWNNGEEEDLSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 891


>gi|16758746|ref|NP_446331.1| contactin-4 precursor [Rattus norvegicus]
 gi|55976164|sp|Q62845.1|CNTN4_RAT RecName: Full=Contactin-4; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 2; Short=BIG-2;
           Flags: Precursor
 gi|1016012|gb|AAC52262.1| neural cell adhesion protein BIG-2 precursor [Rattus norvegicus]
 gi|149036848|gb|EDL91466.1| contactin 4, isoform CRA_a [Rattus norvegicus]
          Length = 1026

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 264/794 (33%), Positives = 394/794 (49%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVEGSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  +  P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RRGQGMVLLCGPPPHSGELSYAWIFNEHPSY--QDNRRFVSQETGNLYIAKVEKADVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V+     GP  PL +       +   K    FP+T P   + G  V+LEC A 
Sbjct: 193 TCVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGSTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     + IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTILWRRADGKPIARKARRHKSSGILEIPNFQQEDAGSYECVAENSRGKNIAKGQV 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  ++R  
Sbjct: 311 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLTRERIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    Y+SA+L V+   P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+P+P + W+K   I+    R  I E+GNL I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G  +V+  P+     P  + +    ++ L C    +  LD+ + WT NG  I 
Sbjct: 483 FGTASSTGN-VVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 542 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  VS   + + VD   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELVD---GKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 717 VITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEV 775

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 776 KVGVFNNKGEGPFS 789



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 172/762 (22%), Positives = 278/762 (36%), Gaps = 73/762 (9%)

Query: 248 DKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKFGS--IISESVQLAF---GFIGEFNLK 301
           ++RF +   GNL I    +  D G+Y C  +N   S  ++     L     G +GE+  K
Sbjct: 168 NRRFVSQETGNLYIAKVEKA-DVGNYTCVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPK 226

Query: 302 ---RAPEIGNQNWGKA--MFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS 356
              + PE      G    + C    N P     W R        + +R   S  G L   
Sbjct: 227 IEVQFPETVPAEKGSTVKLECFALGN-PVPTILWRRADGKPIARKARRHKSS--GILEIP 283

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK 416
             +Q DAG+Y C  ++     G+N     +  +   N+ Q+   N+      E+      
Sbjct: 284 NFQQEDAGSYECVAEN---SRGKNIAKGQVTFYAQPNWVQII--NDIHVAMEES------ 332

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V  EC A G P P+Y W + G PL      +     L I  V + D G Y C A N    
Sbjct: 333 VFWECKANGRPKPTYRWLKNGDPLLTRERIQIEQGTLNITIVNLSDAGMYQCVAENKHGV 392

Query: 477 LESSVTISIQAE-PNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSET 533
           + +S  +S+ AE P+F+  L  +   +    ++   C+    P   Y+W +  E+L    
Sbjct: 393 IYASAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREIL---- 448

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
               + +R  I ++   +R +N  + D   Y C A N   T  S+    V+   P+    
Sbjct: 449 ---RENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGN--VVVKDPTKVMV 502

Query: 593 PLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-------GNLL 644
           P  S +   GE   +      + +    F W  +G++I        FE        G+L+
Sbjct: 503 PPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLM 562

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I  +    +G Y C          +   LIV   P   E +           L  R    
Sbjct: 563 IRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPD 622

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKST 762
               + +  I       +G   ++ +  P + +DG     T        EYE   V  + 
Sbjct: 623 NHSPITMYVIQARTPFSVGWQAVSTV--PEL-VDGKTFTATVVGLNPWVEYEFRTVAANV 679

Query: 763 VG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKII 814
           +G     + S K       P   P  V      K+   I W    +   NGR    Y + 
Sbjct: 680 IGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF-GYVVA 738

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
            R +    W      +   +  RY  R E+     + P+S +E KV   N  G G P SP
Sbjct: 739 FRPHGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG-PFSP 790

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           +    +  ++P + P+ I        D+ + W     + +     Y   +WR  +D E  
Sbjct: 791 TTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPIGKNRGRIQGYEVKYWRH-DDKEEN 849

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 850 ARKIRTVGNQ--TSTKITNLKGNALYHLSVKAYNSAGTGPSS 889


>gi|449484285|ref|XP_002198167.2| PREDICTED: contactin-5 [Taeniopygia guttata]
          Length = 1099

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 262/811 (32%), Positives = 397/811 (48%), Gaps = 34/811 (4%)

Query: 174 YQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           Y +    ++ + +  GP F+++P D++F          ++L+C A G P P+Y W +   
Sbjct: 82  YHFSETFKHDESVDYGPVFVQEPDDIIFPTDSEE--KKVSLNCQARGNPTPTYRWLRN-- 137

Query: 234 VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                    I+  SD RF+L  G+LII++P +++D G Y C  +N FGSI+S    L F 
Sbjct: 138 ------GTEINIESDYRFSLIEGSLIISNPSEMKDSGQYQCLTTNMFGSILSREAVLQFA 191

Query: 294 FIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-G 351
           ++G F+ + R+     +  G  + C PP + P + Y W  + FP+FV ED R F+S + G
Sbjct: 192 YLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEIIYSWVFNEFPSFVAEDSRRFISQETG 251

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPE 409
            LY S ++  D G+Y C V++ V++     P  PL +       +   K   +FP     
Sbjct: 252 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYVVTA 311

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           A   G  V++EC A G PVP+ +W +     P  A       +L IPNV++ED G Y C+
Sbjct: 312 A--RGTTVKMECFALGNPVPTISWRKVNGHNPSKARLRKSQAVLEIPNVQLEDSGMYECK 369

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           A N R        + +   P++   L D  +D+   L W C+A G P  TY W +NG   
Sbjct: 370 AENSRGRNVFRGQLQVYTYPHWVEKLNDTQLDSGDQLRWECKATGKPRPTYRWLKNG--- 426

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
               +PL  Q R  + + VL I   N   D  MYQC A+N+  T Y+SA+L++L   P+F
Sbjct: 427 ----VPLWPQSRIEMINGVLMIHSANVS-DAGMYQCLAENKYGTIYASAELKILASAPTF 481

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
               +       +G  V I C PEA+PKP   WKK   ++    R  +  +G+L I   S
Sbjct: 482 PLNQMRKTIIVTKGQEVVIECKPEASPKPTITWKKGDKVLRENKRITVLPHGSLRILNAS 541

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           + D G Y C   NV G  E    + V   P+  E  P K+ +    ++ L C A  +  +
Sbjct: 542 KSDEGRYLCQGVNVFGSAEIIASVSVKE-PTRIELTPKKVELTVGESIVLSCRALHDSTM 600

Query: 710 DVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           DV + WT NG  I    +    E+         L I N     AG Y C V++    +S 
Sbjct: 601 DVTFYWTLNGQPIDFEKEGGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADTVSD 660

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
           +T ++V GPPG PG V V E+  T+AT+ W+ GA N  PI+ Y + AR+ ++  W  V  
Sbjct: 661 ETELLVRGPPGPPGVVIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGWQTV-- 718

Query: 829 HVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
               K V D  +G  E+++   L PW  YEF+V+A N++G G+PS+PS    T    P  
Sbjct: 719 ----KTVPDLISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTNEAVPKT 774

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
            P+ + G  G+  +L I+WEP+  E Q+     Y + +R  N T    E +    +    
Sbjct: 775 PPANVSGRSGRRHELVIAWEPVSEEFQSGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKF 833

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + R  S    T +EVKV   N+ G GP S +
Sbjct: 834 IYRDESVPPLTPFEVKVGVYNNKGDGPFSPI 864


>gi|426249258|ref|XP_004018367.1| PREDICTED: contactin-4 [Ovis aries]
          Length = 1026

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 264/799 (33%), Positives = 398/799 (49%), Gaps = 35/799 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + LSC   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DIGMDFRYSVVEGSLLINNPNKTQDAGMYQCIATNLFGTIVSREAKLQFAYLENFKPRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRQGQGMVLLCGPPAHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+  P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPEMVPTA--KGTTVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+   A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIATKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN++  + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 AKGQLTFYAQPNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGE-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +SSA+L V+ + P F +  L+  T
Sbjct: 359 RDRIHIEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +++    R  I E+G+L I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVVIECKPKASPKPVYTWKKGRDVLKENERITISEDGSLRIINVTKSDAGSYTC 477

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  L++ + W+ N
Sbjct: 478 IATNHFGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFN 536

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GP
Sbjct: 537 GRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 596

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  P+T Y I ART ++  W  V  + + + +D 
Sbjct: 597 PGPPEAVTIDEITDTTAQLSWRPGPDNHSPVTMYVIQARTPFSVGWQAV--NTVPELID- 653

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 654 --GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGG 711

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +    L    +    V R  S   +
Sbjct: 712 SKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPF 770

Query: 958 TEYEVKVQAINDVGPGPES 976
           + +EVKV   N+ G GP S
Sbjct: 771 SPFEVKVGVFNNKGEGPFS 789



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 147/648 (22%), Positives = 233/648 (35%), Gaps = 56/648 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVAKGQLTFYAQPNWSQKI--NDIHVAIEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL            L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIHIEQGTLNITIVNLSDAGMYQCV 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 386 AENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DVL-------KENERITISEDG-SLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G +I        FE      
Sbjct: 497 PTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPVTMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 733

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 734 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGE 785

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + 
Sbjct: 786 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRH 843

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 844 DDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 889


>gi|296475000|tpg|DAA17115.1| TPA: contactin-4-like [Bos taurus]
          Length = 1014

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 265/794 (33%), Positives = 399/794 (50%), Gaps = 36/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 14  GPIFIQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 63

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 64  FRYSVVEGSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLQFAYLENFKPRTRSTVSV 123

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 124 RQGQGMVLLCGPPAHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 181

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P A   G  V+LEC A 
Sbjct: 182 TCVVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGTTVKLECFAL 239

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+   A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 240 GNPVPTIIWRRADGKPIATKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVAKGQL 299

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN++  + D H+  + ++ W C+A G P  TY W +NGE       PL  +DR  
Sbjct: 300 TFYAQPNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIH 352

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+ + P F +  L+  T    G
Sbjct: 353 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVG 411

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP   WKK  +++    R  I E+G+L I  V++ D+G Y+C ATN 
Sbjct: 412 GEVVIECKPKASPKPVHTWKKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATNH 471

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  L++ + W+ NG R+ 
Sbjct: 472 FGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNG-RLI 529

Query: 724 NMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
           + D +      +  D  G L I N     AG+Y C+V+++V ++S    +IV GPPG P 
Sbjct: 530 DFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPE 589

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 590 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 644

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 645 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 704

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 705 VITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEV 763

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 764 KVGVFNNKGEGPFS 777



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 146/647 (22%), Positives = 233/647 (36%), Gaps = 55/647 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 266 NGILEIPNFQQEDAGLYECVAEN---SRGKNVAKGQLTFYAQPNWSQKI--NDIHVAIEE 320

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL            L I  V + D G Y C 
Sbjct: 321 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIHIEQGTLNITIVNLSDAGMYQCV 374

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   ++W +  
Sbjct: 375 AENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVHTWKKGR 434

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 435 DVL-------KENERITISEDG-SLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 485

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G +I        FE      
Sbjct: 486 PTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGDS 545

Query: 641 -GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+L+I  +    +G Y C          +   LIV   P   E +           L  
Sbjct: 546 AGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSW 605

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
           R        + +  I       +G   +N +  P + IDG     T        EYE   
Sbjct: 606 RPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFRT 662

Query: 758 VVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPIT 809
           V  + +G     + S K       P   P  V      K+   I W    +   NGR   
Sbjct: 663 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF- 721

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G G
Sbjct: 722 GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG 774

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + +
Sbjct: 775 -PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRHD 832

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 833 DKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPAS 877


>gi|291408740|ref|XP_002720672.1| PREDICTED: contactin 4-like [Oryctolagus cuniculus]
          Length = 1049

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 261/797 (32%), Positives = 398/797 (49%), Gaps = 36/797 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D++  GP F+++P+ V+F L        + LSC A G P P   W        +L    +
Sbjct: 44  DRVLHGPVFVQEPSHVMFPLDSEE--RKVKLSCEAEGTPKPLIRW--------KLNGTDV 93

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+++S   +L F ++  F  +  
Sbjct: 94  DIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTVVSREAKLQFAYLENFRTRTR 153

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  +  P++  +D R FVS + G LY + +E  
Sbjct: 154 STVSVRRGQGMVLLCAPPPHSGELSYAWIFNERPSY--QDSRRFVSQETGNLYIAKVEPS 211

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P +   G  V+L
Sbjct: 212 DVGNYTCVVTNTVTNQRVLGPPTPLVLRDDGVMGEYEPKIEVQFPETVPTS--RGATVKL 269

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G PL R +     + +L IPN + ED G Y C A N R    
Sbjct: 270 ECFALGNPVPTITWRRADGKPLARKSRRHKSSGVLEIPNFQQEDAGLYECVAENSRGKNV 329

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
               ++  A+P++   + D H+  +  + W C A G P  TY W +NGE       PL  
Sbjct: 330 VRGQLTFYAQPSWIQKINDIHVAMEESVFWECRANGRPKPTYRWLKNGE-------PLLT 382

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +SSA+LRV+   P F +  L+  T
Sbjct: 383 RDRIQIEQGTLNITVVNLS-DAGMYQCVAENEHGAAFSSAELRVIAAGPDFSRTLLKRVT 441

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG   I CNP+A+PKP + WKK  +++    R  I E+G+L I  V++ D+G Y+C
Sbjct: 442 LVRVGGEAAIECNPKASPKPVYTWKKGRDVLRESERITISEDGDLRIVNVTKADTGSYTC 501

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 502 IATNHFGTASSTGNLVV-KDPTRVTVPPSSMDVTVGESIVLPCQVTHDHSLDIVFAWSFN 560

Query: 719 GVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G R+ + D +      +  D  G L I N     AG Y C+V+++V ++S    ++V GP
Sbjct: 561 G-RLIDFDKDGDHFERVGGDSAGDLMIRNIQLTHAGRYVCMVQTSVDRLSVTADLVVRGP 619

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  ++A + W  G  N  P+T Y I ART ++  W  VS   + + +D 
Sbjct: 620 PGPPEAVTIDEITDSTAQLSWRPGPDNHSPVTTYIIQARTPFSVGWQAVS--TVPELID- 676

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             GR   +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG
Sbjct: 677 --GRTFTATVVGLSPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGG 734

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y + +R      +    L    +    V R  S   +
Sbjct: 735 SKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADACRYVFRNESVRPF 793

Query: 958 TEYEVKVQAINDVGPGP 974
           + +EVKV   N+ G GP
Sbjct: 794 SPFEVKVGVFNNKGEGP 810



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 152/657 (23%), Positives = 236/657 (35%), Gaps = 77/657 (11%)

Query: 351 GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA 410
           G L     +Q DAG Y C  ++     G+N     L  +   ++ Q    N+      E+
Sbjct: 302 GVLEIPNFQQEDAGLYECVAEN---SRGKNVVRGQLTFYAQPSWIQKI--NDIHVAMEES 356

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
                 V  EC A G P P+Y W + G PL      +     L I  V + D G Y C A
Sbjct: 357 ------VFWECRANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITVVNLSDAGMYQCVA 410

Query: 471 SNDRSALESSVTIS-IQAEPNFTIPLTDK----HMDNQADLTWTCEAFGVPDVTYSWFRN 525
            N+  A  SS  +  I A P+F+  L  +     +  +A +   C     P   Y+W + 
Sbjct: 411 ENEHGAAFSSAELRVIAAGPDFSRTLLKRVTLVRVGGEAAIE--CNPKASPKPVYTWKKG 468

Query: 526 GELLN-SETLPL-EDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRV 582
            ++L  SE + + ED D          +R +N  + D   Y C A N   T  S+  L V
Sbjct: 469 RDVLRESERITISEDGD----------LRIVNVTKADTGSYTCIATNHFGTASSTGNLVV 518

Query: 583 -----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
                +T+ PS        +   GE   +      + +    F W  +G +I        
Sbjct: 519 KDPTRVTVPPS------SMDVTVGESIVLPCQVTHDHSLDIVFAWSFNGRLIDFDKDGDH 572

Query: 638 FEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 691
           FE       G+L+I  +    +G Y C              L+V   P   E +      
Sbjct: 573 FERVGGDSAGDLMIRNIQLTHAGRYVCMVQTSVDRLSVTADLVVRGPPGPPEAVTIDEIT 632

Query: 692 AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 751
            +   L  R        +    I       +G   ++ +  P + IDG     T    + 
Sbjct: 633 DSTAQLSWRPGPDNHSPVTTYIIQARTPFSVGWQAVSTV--PEL-IDGRTFTATVVGLSP 689

Query: 752 AGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DG 801
             EYE   V  + +G     + S K       P   P  V      K+   I W    + 
Sbjct: 690 WVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEE 749

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             NGR    Y +  R      W      +   +  RY  R E+     + P+S +E KV 
Sbjct: 750 LQNGRGF-GYVVAFRPYGKMIWMLTV--LASADACRYVFRNES-----VRPFSPFEVKVG 801

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
             N  G G  S P+  Y+   ++P + P+ I        D+ + W   P EK       Y
Sbjct: 802 VFNNKGEGPFSPPTVVYSA-DEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGY 859

Query: 922 KI-FWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           ++ +WR + D E  +  ++  GN     +  +        Y + V+A N  G GP S
Sbjct: 860 EVKYWRHE-DKEENARKIRTIGNQTSTTITNLQGSAL---YHLAVKAYNSAGTGPAS 912


>gi|432858868|ref|XP_004068978.1| PREDICTED: contactin-3-like [Oryzias latipes]
          Length = 1026

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 271/802 (33%), Positives = 398/802 (49%), Gaps = 35/802 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D I +GP +  +P+D++  LS  S  +  TL+C A G P P Y W         L   LI
Sbjct: 23  DVIFQGPRWRTEPSDLI--LSINSPDHQATLTCEAEGSPQPQYRW--------SLNGTLI 72

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           DP  + R  +SGG+LII++  + +D G Y C A N  GSI+S    L F ++  F  +  
Sbjct: 73  DPGHNYRRRVSGGSLIISNLDKDQDSGVYQCTAFNTRGSILSRKASLQFAYLDNFKTQMV 132

Query: 304 PEIGN--QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQ 360
               N  +  G  + C PP +   + + W  + +P FV++D R F+S + G+LY + +E 
Sbjct: 133 RSAVNVREGQGVVLLCGPPPHSGELTFAWIFNQYPYFVQQDSRRFISQETGSLYIAKVEP 192

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVR 418
            D GNY+C V + ++         PL +       +   K   +F    P A ++   V+
Sbjct: 193 SDVGNYTCVVNNTITREKALSSPTPLVLRNDGVMGEYEPKIEVHFLDPVPAAKES--MVK 250

Query: 419 LECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC A G PVP  +W R  G P P     +N N +L IPN + +D G Y C A N R   
Sbjct: 251 LECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPNFQQDDSGTYECIAENRRGKN 310

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
            +   IS  A+P++   +TD  +  + +L W C+A G P  +YSW +NGE + +E     
Sbjct: 311 VARGRISFHAKPHWIQTMTDSALSIEENLFWECKASGKPKPSYSWLKNGEQVMAE----- 365

Query: 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE 597
              R  I++  L+I  LN   D  MYQC A+N+  T Y SAQL VL   P F K PL++ 
Sbjct: 366 --GRVQIENGALSITALN-LSDSGMYQCVAENKHGTIYYSAQLMVLASAPHFSKTPLKTV 422

Query: 598 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
             A  G  VT+ C PEA+P    +WKK   I+    R  +F NG L I+ V++ D+ IY+
Sbjct: 423 LKARLGSEVTLECKPEASPPAISLWKKGNEILQRSERLSLFSNGTLQIANVTKWDAAIYT 482

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N  G   + GRLI+   P+     P  + I    ++ L C   ++  LDV + W  
Sbjct: 483 CVAKNQFGSASTSGRLIITE-PTRLTMRPTNMEIIVGESIVLPCQIASDPALDVTFSWAF 541

Query: 718 NGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           NG  I    D +  E    ++ G L+ I N      G+Y CV+ + V  +ST   ++V+ 
Sbjct: 542 NGQLIDFRRDGDHYERVGGSLSGDLM-IRNIQLKHGGKYVCVIDTDVESLSTSAILVVKA 600

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
           PPG P  V V E+  ++A + WT G  NG PIT Y + ART +   W       +    +
Sbjct: 601 PPGPPDKVTVEEITDSTAQLSWTPGRDNGSPITGYSVQARTPFTVGW-----QAMDTVPE 655

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
             TG    +    L  W  YEF+V+A N +G GEPS  S +  T    P  AP+ +GGGG
Sbjct: 656 AVTGNMLTATVVGLNAWVEYEFRVVARNAVGLGEPSPSSAKTRTEDTIPDTAPTDVGGGG 715

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
           G   +L I+WEP+P E QN     Y I +R      +    +   G V   V R  +   
Sbjct: 716 GTKSELVITWEPVPEELQNGDGFGYIIAFRPAGAVTWTRAVISTPG-VSRYVFRNDTIPP 774

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
           ++ +++KV A N+ G GP S +
Sbjct: 775 FSPFDIKVGAYNNRGEGPFSTI 796



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 227/601 (37%), Gaps = 93/601 (15%)

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G P PSY+W + G  +      +  N  L+I  + + D G Y C A N    +  
Sbjct: 342 ECKASGKPKPSYSWLKNGEQVMAEGRVQIENGALSITALNLSDSGMYQCVAENKHGTIYY 401

Query: 480 SVTISIQAE-PNFT-IPL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN-SETLP 535
           S  + + A  P+F+  PL T       +++T  C+    P     W +  E+L  SE L 
Sbjct: 402 SAQLMVLASAPHFSKTPLKTVLKARLGSEVTLECKPEASPPAISLWKKGNEILQRSERLS 461

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L         +  L I  +  + D A+Y C AKNQ  +  +S +L ++T       RP  
Sbjct: 462 L-------FSNGTLQIANVT-KWDAAIYTCVAKNQFGSASTSGRL-IITEPTRLTMRPTN 512

Query: 596 SETYAGEGGNVTIFCNPEAAPK--PKFVWKKDGNIIGSGGRRKIFE------NGNLLISP 647
            E   GE  ++ + C   + P     F W  +G +I        +E      +G+L+I  
Sbjct: 513 MEIIVGE--SIVLPCQIASDPALDVTFSWAFNGQLIDFRRDGDHYERVGGSLSGDLMIRN 570

Query: 648 VSRDDSGIYSCTA-TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
           +     G Y C   T+V  +  S   ++V+  P      P K+T+              E
Sbjct: 571 IQLKHGGKYVCVIDTDVESLSTSA--ILVVKAP---PGPPDKVTV--------------E 611

Query: 707 ELLD--VAYIWT---HNGVRIGNMDLNE----------LETPNINIDGGLLEITNASFAD 751
           E+ D      WT    NG  I    +            ++T    + G +L  T      
Sbjct: 612 EITDSTAQLSWTPGRDNGSPITGYSVQARTPFTVGWQAMDTVPEAVTGNMLTATVVGLNA 671

Query: 752 AGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT- 799
             EYE   V ++ VG         K  T+ T+    P  + GG       K+   I W  
Sbjct: 672 WVEYEFRVVARNAVGLGEPSPSSAKTRTEDTIPDTAPTDVGGGGGT----KSELVITWEP 727

Query: 800 --DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
             +   NG     Y I  R     TW        G  V RY  R +      + P+S ++
Sbjct: 728 VPEELQNGDGF-GYIIAFRPAGAVTWTRAVISTPG--VSRYVFRND-----TIPPFSPFD 779

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            KV A N  G G  S+ +  Y+   D P   P R+         + + WE +    +   
Sbjct: 780 IKVGAYNNRGEGPFSTITTVYSA-EDVPSVPPKRVWARSLSAAQIEVMWEAVSDMPERVL 838

Query: 918 NIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
             Y  ++W    K DT  +      Y  V I  ++  + FY     + V A N  GPGP+
Sbjct: 839 G-YEVVYWEDDTKPDTIGKVRITGNYTLVNITGLKANTAFY-----LSVAAFNTAGPGPQ 892

Query: 976 S 976
           S
Sbjct: 893 S 893


>gi|301612220|ref|XP_002935618.1| PREDICTED: contactin-5-like [Xenopus (Silurana) tropicalis]
          Length = 1097

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 257/796 (32%), Positives = 391/796 (49%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P ++VF +   S    + L+C A G P P Y W +            ID  +D
Sbjct: 96  GPVFVQEPENIVFPMD--SGEKKVALNCEARGVPTPIYRWLRN--------GTEIDLEND 145

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R+++  GN II+ P +++D G Y C A+N FGSI+S    L F ++G F+ + R+    
Sbjct: 146 YRYSMIDGNFIISSPNEMKDSGQYQCLAANSFGSILSREATLQFAYLGNFSGRIRSAVSV 205

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S   G LY S  +  D G+Y
Sbjct: 206 REGQGVVLMCSPPHHSPELIYSWVFNEFPSFVAEDSRRFISQQTGNLYISKAQASDVGSY 265

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ +++T    P  PL +       +   K   +FP TF  A   G  V++EC A 
Sbjct: 266 ICLVKNPLTNTRVMSPPTPLTLRNDGVMGEYEPKIEVHFPYTFTAA--QGTTVKMECFAL 323

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+ +W +    +P  A       +L IPNV++ED G Y C+A N R        + 
Sbjct: 324 GNPVPTISWRKVSGFIPSKARLRKAQAVLEIPNVQLEDAGTYECKAENSRGKNAFRGQLQ 383

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +  +P +   + D  +D+   L W C+A   P   Y W +NG       LPL  Q+R  +
Sbjct: 384 VYTQPQWIEKINDTQLDSGDQLRWECKAEAKPRPIYRWLKNG-------LPLMPQNRIEM 436

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + +LTI  +N + D  MYQC A+N     Y SA+L+VL   P+F+    +      +G 
Sbjct: 437 VNGMLTIHNVN-QSDAGMYQCLAENIYGIIYGSAELKVLASAPTFELSQKQKTVVITKGK 495

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V + C P A+PKP   W K    +    R  +  +G+L I   S+ D G Y+C   N+ 
Sbjct: 496 EVVLECKPSASPKPSISWMKGEKAVRQNKRVAVLPDGSLRILNASKSDEGRYTCRGENIF 555

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G+ E    + V   P+  E  P +  +    ++ L C A  + LLDV++ W  NG  +  
Sbjct: 556 GLAEIVASVFVTE-PTKIELTPKRTELTVGESIVLSCKAIHDPLLDVSFSWILNGQPVSF 614

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  V+V GPPG PG 
Sbjct: 615 EKEDGHFESIRTQASSADLMIRNILLMHAGRYGCRVQTTADTVSDEAEVLVRGPPGPPGV 674

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ +++AT+ W+ GA N  PI  Y + AR+ ++  W  V      K V +   G  
Sbjct: 675 VIVEEITESTATLSWSPGAENHSPILCYNLQARSPFSLGWQTV------KTVPEIINGEM 728

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS PS    T    P   P+ + GG G+  +L
Sbjct: 729 ESAMVVDLNPWVEYEFRVVATNSIGTGDPSVPSRVIRTKEAVPKTPPANVSGGSGRRHEL 788

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N+T    E +    +    + R  S    T +EV
Sbjct: 789 VITWEPVSEEFQNGEGFGYIVAFR-PNNTRGWKEKMVTSSDASKFIYRDESTPPLTPFEV 847

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 848 KVGVYNNKGDGPFSDI 863



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 171/768 (22%), Positives = 280/768 (36%), Gaps = 104/768 (13%)

Query: 256 GNLIINDPRQVEDRGSYHCKASNKFGS--IISESVQLAF---GFIGEFNLKRAPEI---- 306
           GNL I+   Q  D GSY C   N   +  ++S    L     G +GE+  K         
Sbjct: 250 GNLYISKA-QASDVGSYICLVKNPLTNTRVMSPPTPLTLRNDGVMGEYEPKIEVHFPYTF 308

Query: 307 -GNQNWGKAMFCDPPTN-YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG 364
              Q     M C    N  P +++     + P+     K         L    ++  DAG
Sbjct: 309 TAAQGTTVKMECFALGNPVPTISWRKVSGFIPS-----KARLRKAQAVLEIPNVQLEDAG 363

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
            Y C  ++     G+N     L+V+          P    K       +GD++R EC A 
Sbjct: 364 TYECKAEN---SRGKNAFRGQLQVYTQ--------PQWIEKINDTQLDSGDQLRWECKAE 412

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
             P P Y W + G PL      E  N +LTI NV   D G Y C A N    +  S  + 
Sbjct: 413 AKPRPIYRWLKNGLPLMPQNRIEMVNGMLTIHNVNQSDAGMYQCLAENIYGIIYGSAELK 472

Query: 485 IQAE-PNFTIPLTDKH--MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           + A  P F +    K   +    ++   C+    P  + SW +  + +       +++  
Sbjct: 473 VLASAPTFELSQKQKTVVITKGKEVVLECKPSASPKPSISWMKGEKAVR------QNKRV 526

Query: 542 YFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             + D   ++R LN  + D   Y CR +N        A + V T     +  P  +E   
Sbjct: 527 AVLPDG--SLRILNASKSDEGRYTCRGENIFGLAEIVASVFV-TEPTKIELTPKRTELTV 583

Query: 601 GEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFEN-------GNLLISPVSRD 651
           GE  ++ + C     P     F W  +G  +        FE+        +L+I  +   
Sbjct: 584 GE--SIVLSCKAIHDPLLDVSFSWILNGQPVSFEKEDGHFESIRTQASSADLMIRNILLM 641

Query: 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA-----AHRNLQLRCSAHTE 706
            +G Y C           +  ++V   P      PP + I      +   L     A   
Sbjct: 642 HAGRYGCRVQTTADTVSDEAEVLVRGPPG-----PPGVVIVEEITESTATLSWSPGAENH 696

Query: 707 ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG-----EYECVVKS 761
             +    +   +   +G   +  +  P I I+G   E+ +A   D       E+  V  +
Sbjct: 697 SPILCYNLQARSPFSLGWQTVKTV--PEI-ING---EMESAMVVDLNPWVEYEFRVVATN 750

Query: 762 TVGK---------ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW---TDGATNGRPIT 809
           ++G          I TK  V    P  + GG       +    I W   ++   NG    
Sbjct: 751 SIGTGDPSVPSRVIRTKEAVPKTPPANVSGG----SGRRHELVITWEPVSEEFQNGEGF- 805

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y +  R N    W    + V   +  ++  R E++      P + +E KV   N  G G
Sbjct: 806 GYIVAFRPNNTRGWKE--KMVTSSDASKFIYRDEST-----PPLTPFEVKVGVYNNKGDG 858

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN-APNIYYKIFWRKK 928
            P S      +   +P  AP+ + G G    ++ ++W+P+   K+N   ++ Y++ + K 
Sbjct: 859 -PFSDIVFICSAEGEPTTAPADVKGTGLSASEIVVAWKPM---KENLGKSLGYEVSYWKD 914

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            + E  SE +K  GN   + V +      T Y + V+A N  G GP S
Sbjct: 915 MEQEEASEKVKTAGNE--SSVILTDLDGNTLYHITVRAYNKAGYGPPS 960


>gi|334335510|ref|XP_001373638.2| PREDICTED: contactin-3 [Monodelphis domestica]
          Length = 1031

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 270/815 (33%), Positives = 403/815 (49%), Gaps = 36/815 (4%)

Query: 172 RTYQYGMDIENP--DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWF 229
           R Y   + + +P  D   +GP FI++P++ +F +        ITL+C A G P+P Y W 
Sbjct: 8   RLYLPSLSLYHPTGDVSLQGPVFIREPSNNIFPVGSEE--KKITLNCEAKGNPSPHYRW- 64

Query: 230 KEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQ 289
                  +L  + ID   D R+ L GGNL++ +P +  D G+Y C A+N  G+++S+  +
Sbjct: 65  -------QLNGSDIDLSMDYRYKLIGGNLVVINPSRNRDIGTYQCFATNSLGTVVSKEAK 117

Query: 290 LAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS 348
           L F ++  F  K    +   +  G  + C PP +   ++Y W  + +P+FV+ED R FVS
Sbjct: 118 LQFAYLEHFKTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVQEDSRRFVS 177

Query: 349 YD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPK 405
            + G LY + +E  D GNY+C V S V++    G   PL +       +   K    FP+
Sbjct: 178 QETGHLYIAKVEPSDVGNYTCVVTSTVTNNRVLGSPTPLVLRTDGVMGEYEPKIEVQFPE 237

Query: 406 TFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQG 464
           T P A   G  V+LEC A G PVP  NW R  G P          N +L IPN + ED G
Sbjct: 238 TLPAA--KGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKMRKSNGMLEIPNFQQEDTG 295

Query: 465 EYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR 524
            Y C A N R    +   ++  A+P++   + D     + +L W C A G P  +Y W +
Sbjct: 296 LYECIAENSRGKNIARGRLTYYAKPHWVQMIKDIEAAVEDNLYWECRASGKPKPSYRWLK 355

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG+ L  E       +R  I +  L+I  LN   D  MYQC A+N+    YSSA+L+V+ 
Sbjct: 356 NGDGLIVE-------ERVQIDNGALSIAVLN-VNDSGMYQCIAENKHGLIYSSAELKVVA 407

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 644
             P F K P++       G  V   C P+A+PK    WKK   I+ S  R  I ++G L 
Sbjct: 408 SAPDFSKNPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKKGDEILQSSERTAILKDGGLQ 467

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I+ V++ D G Y+C A N  G   S  +L+V   P+     P  + ++   ++ L C   
Sbjct: 468 IANVTKLDVGTYTCIAENQFGKASSSTKLVVTE-PTRITLAPSNMDVSVGESVILPCQVQ 526

Query: 705 TEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            + LLD+ + W  NG       D +  E    +  G L+ I N     +G+Y C+V++ V
Sbjct: 527 HDPLLDIVFTWYFNGAITDFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTEV 585

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 823
             +S+   +IV G PG P  V+V E+  T+A + W +G  N  PIT Y I ART ++  W
Sbjct: 586 DSVSSAADLIVRGSPGPPESVKVDEITDTTAQLSWKEGTDNHSPITSYVIQARTPFSVGW 645

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
                 ++    D   G+   +    L PW  YEF+V+A N++G GEPS PS +  T   
Sbjct: 646 -----QIVTTVPDTIDGKTFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEA 700

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 943
            P   PS + GGGG   +L I+W+P+P E QN     Y + +R    T +  +T+    +
Sbjct: 701 VPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPD 759

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               V R  S   ++ YEVKV   N+ G GP S V
Sbjct: 760 TPRYVFRNESILSFSPYEVKVGVYNNKGEGPFSPV 794



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 155/652 (23%), Positives = 235/652 (36%), Gaps = 64/652 (9%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q D G Y C  ++     G+N     L  +   ++ Q+       K    
Sbjct: 281 NGMLEIPNFQQEDTGLYECIAEN---SRGKNIARGRLTYYAKPHWVQMI------KDIEA 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           A +  D +  EC A G P PSY W + G  L      +  N  L+I  + V D G Y C 
Sbjct: 332 AVE--DNLYWECRASGKPKPSYRWLKNGDGLIVEERVQIDNGALSIAVLNVNDSGMYQCI 389

Query: 470 ASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  + + A  P+F+     K +  Q    + + C+    P    SW +  
Sbjct: 390 AENKHGLIYSSAELKVVASAPDFSKNPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKKGD 449

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E+L S       +    ++D  L I  +  + D   Y C A+NQ     SS +L V+T  
Sbjct: 450 EILQS------SERTAILKDGGLQIANVT-KLDVGTYTCIAENQFGKASSSTKL-VVTEP 501

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE----- 639
                 P   +   GE  +V + C  +  P     F W  +G I         FE     
Sbjct: 502 TRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIVFTWYFNGAITDFKKDGSHFEKVGGS 559

Query: 640 -NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
            +G+L+I  +    SG Y C          S   LIV   P   E +           L 
Sbjct: 560 SSGDLMIRNIQLKHSGKYVCMVQTEVDSVSSAADLIVRGSPGPPESVKVDEITDTTAQLS 619

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            +        +    I       +G      + T    IDG     T        EYE  
Sbjct: 620 WKEGTDNHSPITSYVIQARTPFSVG---WQIVTTVPDTIDGKTFTATVVDLNPWVEYEFR 676

Query: 757 CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATN 804
            V  + +G         K+ T+  V    P  + GG       ++   I W    +   N
Sbjct: 677 VVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEELQN 732

Query: 805 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           G     Y +  R    +TW  +   V   +  RY  R E+     ++ +S YE KV   N
Sbjct: 733 GEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----ILSFSPYEVKVGVYN 784

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
             G G P SP     +  ++P  APS +         + +SW+ +P +  +   + Y+I 
Sbjct: 785 NKGEG-PFSPVTTVFSAEEEPTVAPSHVLANSLSSSIIEVSWDAIPWKMSSGRLLGYEIR 843

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +      E  S  +K  GN   A  R+        Y   V+A N  G GP S
Sbjct: 844 YWNNGGKEDSSNRVKVMGNETTA--RLQGLQSNLVYYTAVRAYNSAGTGPFS 893


>gi|344276490|ref|XP_003410041.1| PREDICTED: contactin-3 [Loxodonta africana]
          Length = 1042

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 263/797 (32%), Positives = 396/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        IT +C A G P+P Y W        +L  + ID   
Sbjct: 37  QGPVFIKEPSNSIFPVGSED--KKITFNCEARGNPSPHYRW--------QLNGSDIDLSL 86

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L GGNL++ +P +  D GSY C A+N  G+++S   +L F ++  F  K    + 
Sbjct: 87  EYRYKLIGGNLVVINPNRNWDIGSYQCFATNSLGTVVSREAKLQFAYLENFKTKMRSTVS 146

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 147 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 206

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 207 YTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 264

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         FN IL IPN + ED G Y C A N R    +   
Sbjct: 265 LGNPVPQINWRRSDGLPFSSKIKLRKFNGILEIPNFQQEDSGSYECIAENSRGKNVARGR 324

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 325 LTYYAKPHWVQTIKDIEIAVEDNLYWECRASGKPKPSYRWLKNGEALVLE-------ERI 377

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F + P++       
Sbjct: 378 QIENGALTISNLN-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSRNPMKKLVQVQA 436

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P     WKK   I+    R    ++  L I+ V++ D G Y+C A N
Sbjct: 437 GSLVILECKPRASPSAFSFWKKGDRIVQKSERISFLKDSGLKITNVTKADVGSYTCIAEN 496

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G      RL+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 497 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALT 555

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               + +  E    +  G L+ I N     +G+Y C+V++ V ++S+   +IV G PG P
Sbjct: 556 DFKKEGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDRVSSAADLIVRGSPGPP 614

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+VVE+  T+A + W +G  N  P+  Y + ART ++  W  V+   + + +D   G+
Sbjct: 615 ANVKVVEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTVT--TVPEVID---GK 669

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 670 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 729

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YE
Sbjct: 730 LVITWDPVPEELQNGEGFGYVVAFRPYGVTNW-IQTVVTSPDTSRYVFRNESIVPFSRYE 788

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 789 VKVGVYNNKGEGPFSPV 805



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 162/665 (24%), Positives = 254/665 (38%), Gaps = 87/665 (13%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q D+G+Y C  ++     G+N     L  +   ++ Q         T  
Sbjct: 291 FNGILEIPNFQQEDSGSYECIAEN---SRGKNVARGRLTYYAKPHWVQ---------TIK 338

Query: 409 EAPKA-GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYI 467
           +   A  D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + 
Sbjct: 339 DIEIAVEDNLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQ 398

Query: 468 CRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFR 524
           C A N    + SS  + + A  P+F+     K +  QA   +   C+    P   +S+++
Sbjct: 399 CIAENKHGLVYSSAELKVVASAPDFSRNPMKKLVQVQAGSLVILECKPRASPS-AFSFWK 457

Query: 525 NGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
            G+ +      ++  +R  F++D+ L I  +  + D   Y C A+NQ      + +L V+
Sbjct: 458 KGDRI------VQKSERISFLKDSGLKITNVT-KADVGSYTCIAENQFGKANGTTRL-VV 509

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE-- 639
           T        P   +   GE  +V + C  +  P     F W  +G +         FE  
Sbjct: 510 TEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGALTDFKKEGSHFEKV 567

Query: 640 ----NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP---KITIA 692
               +G+L+I  +    SG Y C          S   LIV   P      PP   K+   
Sbjct: 568 GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDRVSSAADLIVRGSPG-----PPANVKVVEI 622

Query: 693 AHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 750
                QL     T+    V    +       +G   +  +  P + IDG     T     
Sbjct: 623 TDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELN 679

Query: 751 DAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
              EYE   V  + +G         K+ T+  V    P  + GG       ++   I W 
Sbjct: 680 PWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWD 735

Query: 800 ---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
              +   NG     +  ++    TNW      +   V   +  RY  R E+     +VP+
Sbjct: 736 PVPEELQNGEGFGYVVAFRPYGVTNW------IQTVVTSPDTSRYVFRNES-----IVPF 784

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
           S YE KV   N  G G P SP        D+P  APS++        ++ +SW  +P + 
Sbjct: 785 SRYEVKVGVYNNKGEG-PFSPVTAVFFCRDEPAVAPSQVSADSLSSSEIEVSWNAIPWKL 843

Query: 914 QNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKVQAINDVG 971
            N   + Y++ FW      E  S  +K  GN   A +R + S      Y + V+A N  G
Sbjct: 844 SNGHLLGYEVRFWNNSGGEEESSSKVKVSGNETSARLRDLKSNL---AYYMAVRAYNSAG 900

Query: 972 PGPES 976
            GP S
Sbjct: 901 TGPFS 905


>gi|395516497|ref|XP_003762424.1| PREDICTED: contactin-3 [Sarcophilus harrisii]
          Length = 1049

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 264/801 (32%), Positives = 401/801 (50%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D   +GP FI++P++ +F +        +TL+C A G P+P Y W        +L  + I
Sbjct: 40  DVTLQGPVFIREPSNSIFPVDSEE--KKVTLNCEAKGNPSPHYRW--------QLNGSDI 89

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   + R+ L+GGNL++ +P +  D G Y C ASN  G+++S+  +L F ++  F  K  
Sbjct: 90  DLSMEYRYKLNGGNLVVINPNRNRDTGIYQCFASNSLGTVVSKEAKLQFAYLENFKTKMR 149

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P+FV+ED+R FVS + G LY + +E  
Sbjct: 150 STVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVQEDRRRFVSQETGHLYIAKVEPS 209

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V S V++    G   PL +       +   K    FP+T P A   G  V+L
Sbjct: 210 DVGNYTCVVTSTVTNNRVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA--KGSTVKL 267

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP  NW R  G P       +  N +L IPN + ED G Y C A N R    
Sbjct: 268 ECFALGNPVPQINWRRSDGLPFSSKIKMKKSNGMLEIPNFQQEDSGLYECIAENSRGKNV 327

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+P++   + D     + +L W C A G P  +Y W +NG+ L  E      
Sbjct: 328 ARGRLTYYAKPHWVQMIKDVEAAVEDNLYWECRASGKPKPSYRWLKNGDGLVIE------ 381

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
            +R  +++  L+I +LN   D  MYQC A+N+    YSSA+L+V+   P F K P++   
Sbjct: 382 -ERVQLENGALSISFLN-VNDSGMYQCIAENKHGLIYSSAELKVVASAPDFSKNPMKKLI 439

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               G  V   C P+A+PK    WKK   ++ S  R  I ++G L I+ V++ D G Y+C
Sbjct: 440 QVQIGSLVIFDCKPKASPKAHCSWKKGDEVLQSSERITILKDGELQIANVTKLDVGTYTC 499

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N  G   S   LIV   P+     P  + ++   ++ L C    + LLD+ + W  N
Sbjct: 500 LAENQFGKASSSTNLIVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIVFTWYFN 558

Query: 719 G-VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G +     D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G 
Sbjct: 559 GAITDFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTEVDSVSSAAELIVRGS 617

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V+V E+  T+A + W +G  N  P+T Y I ART ++  W      ++    D 
Sbjct: 618 PGPPESVKVDEITDTTAQLSWKEGTDNHSPVTSYVIQARTPFSVGW-----QIVTTVPDV 672

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG
Sbjct: 673 IDGKTFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG 732

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   +
Sbjct: 733 SRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESILSF 791

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + YEVKV   N+ G GP S V
Sbjct: 792 SPYEVKVGVYNNKGEGPFSPV 812



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 157/652 (24%), Positives = 242/652 (37%), Gaps = 68/652 (10%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q D+G Y C  ++     G+N     L  +   ++ Q+       K    
Sbjct: 299 NGMLEIPNFQQEDSGLYECIAEN---SRGKNVARGRLTYYAKPHWVQMI------KDVEA 349

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           A +  D +  EC A G P PSY W + G  L      +  N  L+I  + V D G Y C 
Sbjct: 350 AVE--DNLYWECRASGKPKPSYRWLKNGDGLVIEERVQLENGALSISFLNVNDSGMYQCI 407

Query: 470 ASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  + + A  P+F+     K +  Q  + + + C+    P    SW +  
Sbjct: 408 AENKHGLIYSSAELKVVASAPDFSKNPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKKGD 467

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E+L S       +    ++D  L I  +  + D   Y C A+NQ     SS  L ++T  
Sbjct: 468 EVLQS------SERITILKDGELQIANVT-KLDVGTYTCLAENQFGKASSSTNL-IVTEP 519

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE----- 639
                 P   +   GE  +V + C  +  P     F W  +G I         FE     
Sbjct: 520 TRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIVFTWYFNGAITDFKKDGSHFEKVGGS 577

Query: 640 -NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
            +G+L+I  +    SG Y C          S   LIV   P   E +  K+        Q
Sbjct: 578 SSGDLMIRNIQLKHSGKYVCMVQTEVDSVSSAAELIVRGSPGPPESV--KVDEITDTTAQ 635

Query: 699 LRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
           L     T+    V    I       +G   +  +  P++ IDG     T        EYE
Sbjct: 636 LSWKEGTDNHSPVTSYVIQARTPFSVGWQIVTTV--PDV-IDGKTFTATVVDLNPWVEYE 692

Query: 757 --CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGA 802
              V  + +G         K+ T+  V    P  + GG       ++   I W    +  
Sbjct: 693 FRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEEL 748

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            NG     Y +  R    +TW  +   V   +  RY  R E+     ++ +S YE KV  
Sbjct: 749 QNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----ILSFSPYEVKVGV 800

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P SP     +  ++P  APS +         + +SW+ +P +  +   + Y+
Sbjct: 801 YNNKGEG-PFSPVTTVFSAEEEPTVAPSHVLANSLSSSIIEVSWDAIPWKMSSGRLLGYE 859

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
           I +      E  S  +K  GN   A  R+        Y   V+A N  G GP
Sbjct: 860 IRYWNNGGKEDSSNRVKVMGNETSA--RLQGLQSNLVYYTAVRAYNSAGTGP 909


>gi|281343741|gb|EFB19325.1| hypothetical protein PANDA_017735 [Ailuropoda melanoleuca]
          Length = 1037

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 264/797 (33%), Positives = 399/797 (50%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FI++P++ +F +        ITL+C A G P+P Y W        +L  + I+   
Sbjct: 49  QGPVFIREPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDINLSM 98

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D GSY C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 99  EYRYKLNGGNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 158

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 159 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGN 218

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 219 YTCVVTSTVTNAKVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGATVKLECFA 276

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         FN +L IP+ + ED G Y C A N R    +   
Sbjct: 277 LGNPVPQINWRRSDGLPFSNKIKLRKFNGVLEIPDFQQEDTGSYECIAENSRGRNVARGR 336

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 337 LTYYAKPHWVQLIKDVEIAVEDNLFWECRASGKPKPSYRWLKNGEALVLE-------ERI 389

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 390 QIENGALTISNLN-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKTPMKKLIQVQV 448

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+PKP   WKK   I+    R    ++G L I+ V++ D G Y+C A N
Sbjct: 449 GSMVSLDCKPRASPKPLCSWKKGDVIVQENERISFLKDGGLKIANVTKADVGTYTCIAEN 508

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G      RL+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 509 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALT 567

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 568 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 626

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+
Sbjct: 627 ENVKVDEITDTTAQLSWKEGIDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GK 681

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 682 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 741

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YE
Sbjct: 742 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIVPFSLYE 800

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 801 VKVGVYNNKGEGPFSPV 817



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 160/660 (24%), Positives = 248/660 (37%), Gaps = 83/660 (12%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q D G+Y C  ++     GRN     L  +   ++ QL       K   
Sbjct: 303 FNGVLEIPDFQQEDTGSYECIAEN---SRGRNVARGRLTYYAKPHWVQLI------KDVE 353

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 354 IAVE--DNLFWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 411

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 412 IAENKHGLVYSSAELKVVASAPDFSKTPMKKLIQVQVGSMVSLDCKPRASPKPLCSWKKG 471

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
             ++       E++   F++D  L I  +  + D   Y C A+NQ      + +L V+T 
Sbjct: 472 DVIVQ------ENERISFLKDGGLKIANVT-KADVGTYTCIAENQFGKANGTTRL-VVTE 523

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 524 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALTDFKKDGSHFEKVGG 581

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +         
Sbjct: 582 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTT 638

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  +        +    +       +G      +  P + IDG     T        E
Sbjct: 639 AQLSWKEGIDNHSPVISYSVQARTPFSVGWQTATTV--PEV-IDGKTHTATVVELNPWVE 695

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 696 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPE 751

Query: 801 GATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
              NG     +  ++ +  TNW      +   V   +  RY  R E+     +VP+S YE
Sbjct: 752 ELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES-----IVPFSLYE 800

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N  
Sbjct: 801 VKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNTIPWKLSNGH 859

Query: 918 NIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            + Y++ +W   N  E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 860 LLGYEVRYW--NNGEEESSSKVKVGGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 913


>gi|410951585|ref|XP_003982475.1| PREDICTED: contactin-3 [Felis catus]
          Length = 1029

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 265/797 (33%), Positives = 399/797 (50%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FI++P++ +F +        ITL+C A G P+P Y W        +L  + I+P  
Sbjct: 24  QGPVFIREPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDINPSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D GSY C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EYRYKLNGGNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++T   G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSMVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPVA--KGATVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGLPFSSKIKLRKFNGVLEIPNFQQEDTGSYECVAENSRGRNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIRDVEIAVEDNLFWECRASGKPKPSYRWLKNGEALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLN-VTDSGMFQCIAENKHGLIYSSAELKVIASAPDFSKTPMKKLLQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+PK    WK+   I+    R    ++G L I  V++ D G Y+C A N
Sbjct: 424 GSMVSLDCKPRASPKALRSWKRGDVIVQENERISFLKDGGLQIVNVTKADVGTYTCIAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G      RL+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGTLT 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT--TVPEIID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIVPFSLYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 161/657 (24%), Positives = 244/657 (37%), Gaps = 77/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q D G+Y C  ++     GRN     L  +   ++ QL           
Sbjct: 278 FNGVLEIPNFQQEDTGSYECVAEN---SRGRNVARGRLTYYAKPHWVQLIRDVEI----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDNLFWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW R 
Sbjct: 387 IAENKHGLIYSSAELKVIASAPDFSKTPMKKLLQVQVGSMVSLDCKPRASPKALRSWKRG 446

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
             ++       E++   F++D  L I  +  + D   Y C A+NQ      + +L V+T 
Sbjct: 447 DVIVQ------ENERISFLKDGGLQIVNVT-KADVGTYTCIAENQFGKANGTTRL-VVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE---- 639
                  P   +   GE  +V + C  +  P     F W  +G +         FE    
Sbjct: 499 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGTLTDFKKDGSHFEKVGG 556

Query: 640 --NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
             +G+L+I  +    SG Y C          S   LIV   P   E +  K+        
Sbjct: 557 SSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--KVDEITDTTA 614

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE- 756
           QL     T+    V                     P I IDG     T        EYE 
Sbjct: 615 QLSWKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEI-IDGKTHTATVVELNPWVEYEF 673

Query: 757 -CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGAT 803
             V  + +G         K+ T+  V    P  + GG       ++   I W    +   
Sbjct: 674 RVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEELQ 729

Query: 804 NGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
           NG     +  ++ +  TNW      +   V   +  RY  R E+     +VP+S YE KV
Sbjct: 730 NGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES-----IVPFSLYEVKV 778

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
              N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   + 
Sbjct: 779 GVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLG 837

Query: 921 YKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           Y++ +W   N  E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 838 YEVRYW--NNGEEESSSKVKVAGNETSARLRGLKSNVAYYT----AVRAYNSAGAGP 888


>gi|345786348|ref|XP_533761.3| PREDICTED: contactin-3 [Canis lupus familiaris]
          Length = 1015

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 264/797 (33%), Positives = 398/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FI++P++ +F +        ITL+C A G P+P Y W        +L  + I+   
Sbjct: 12  QGPVFIREPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDINLSM 61

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 62  EYRYKLDGGNLVVINPNRNWDTGNYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 121

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 122 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 181

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V+     G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 182 YTCVVTSTVTKARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGATVKLECFA 239

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 240 LGNPVPQINWRRSDGLPFSSKIKLRKFNGVLEIPNFQQEDTGSYECIAENSRGRNVARGR 299

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 300 LTYYAKPHWVQLIKDVEIAVEDNLFWECRASGKPKPSYRWLKNGEALVLE-------ERI 352

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 353 QIENGALTISNLN-VTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKAPMKKLMQVQV 411

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+PKP   WKK   I+    R    ++G L I+ V++ D+G Y+C A N
Sbjct: 412 GSMVSLDCKPRASPKPVCSWKKGDMIVQENERISFLKDGGLKIANVTKADAGTYTCIAEN 471

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G      RL+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 472 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALT 530

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 531 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 589

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+
Sbjct: 590 ENVKVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GK 644

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 645 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 704

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YE
Sbjct: 705 LVITWDPVPEELQNGGGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIMPFSLYE 763

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 764 VKVGVYNNKGEGPFSPV 780



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 165/661 (24%), Positives = 250/661 (37%), Gaps = 85/661 (12%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q D G+Y C  ++     GRN     L  +   ++ QL       K   
Sbjct: 266 FNGVLEIPNFQQEDTGSYECIAEN---SRGRNVARGRLTYYAKPHWVQLI------KDVE 316

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 317 IAVE--DNLFWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 374

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K M  Q    ++  C+    P    SW + 
Sbjct: 375 IAENKHGLIYSSAELKVVASAPDFSKAPMKKLMQVQVGSMVSLDCKPRASPKPVCSW-KK 433

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           G+++  E     ++   F++D  L I  +  + D   Y C A+NQ      + +L V+T 
Sbjct: 434 GDMIVQE-----NERISFLKDGGLKIANVT-KADAGTYTCIAENQFGKANGTTRL-VVTE 486

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 487 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGG 544

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +  K+     
Sbjct: 545 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--KVDEITD 599

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
              QL     T+    V                     P + IDG     T        E
Sbjct: 600 TTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEV-IDGKTHTATVVELNPWVE 658

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW----- 798
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W     
Sbjct: 659 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPE 714

Query: 799 --TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
              +G   G  +  ++ +  TNW      +   V   +  RY  R E+     ++P+S Y
Sbjct: 715 ELQNGGGFGY-VVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES-----IMPFSLY 762

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           E KV   N  G G P SP     +  ++P  APSR+        ++ +SW  +P +  N 
Sbjct: 763 EVKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSRVSANSLSSSEIEVSWNTIPWKLSNG 821

Query: 917 PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPG 973
             + Y++ +W   N  E  S  +K  GN   A +R + S   YYT     V+A N  G G
Sbjct: 822 HLLGYEVRYW--NNGEEESSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAG 875

Query: 974 P 974
           P
Sbjct: 876 P 876


>gi|348510473|ref|XP_003442770.1| PREDICTED: contactin-3-like [Oreochromis niloticus]
          Length = 1076

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 265/802 (33%), Positives = 399/802 (49%), Gaps = 36/802 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D I +GP +  +P+D++  ++     +  T++C A G P P Y W         L   LI
Sbjct: 23  DVIFQGPRWRTEPSDLILPINSPD--HQATITCEAEGSPPPQYRW--------SLNGTLI 72

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D  +D R  +SGG+LII++  + +D G Y C A N +GSI+S    L F ++  F  +  
Sbjct: 73  DLGNDYRRHMSGGSLIISNLDKDQDTGVYQCTAFNMWGSILSRRASLQFAYLDNFKTQSV 132

Query: 304 PEIGN--QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQ 360
               N  +  G  + C PP +   + + W  + +P+FV++D R F+S + G+LY + +E+
Sbjct: 133 RSAVNVREGQGVVLLCGPPPHSGELTFAWIFNEYPHFVQQDSRRFISQETGSLYIAKVER 192

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVR 418
            D GNY+C V + V+         PL +       +   K   +FP + P A ++   V+
Sbjct: 193 SDVGNYTCVVNNTVTREKILSSPTPLVLRSDGVMGEYEPKIEVHFPDSVPAAKESA--VK 250

Query: 419 LECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC A G PVP  +W R  G P P     +N N +L IPN + ED G Y C A N R   
Sbjct: 251 LECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPNFQQEDAGTYECMAENRRGKN 310

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
            +   IS  A+P++   + D  +  + +L W C+A G P  +YSW +NGE + ++     
Sbjct: 311 AARGRISFHAKPHWLQTMADTALSIEGNLFWECKANGKPKPSYSWLKNGEQVMAD----- 365

Query: 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE 597
              R  I++  L+I  LN   D  MYQC A+N+    YSSAQL VL   P+F K PL + 
Sbjct: 366 --GRVQIENGALSISSLN-RSDSGMYQCVAENKHGIIYSSAQLMVLASPPTFSKSPLRAL 422

Query: 598 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
             A  G  VT+ C P+A+P    +WKK   I+    R  +  +G L I+ V++ D+  Y+
Sbjct: 423 LKARSGSEVTLECKPQASPPAISLWKKGNEILQRTERIALLPDGTLKIANVTKRDAASYT 482

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N  G   + GRLIV   P+     P  + I    ++ L C   ++  LDV++ W  
Sbjct: 483 CIAKNQFGTASTTGRLIVTE-PTRITMRPTNMEIIVGESIVLPCQIASDPALDVSFSWAF 541

Query: 718 NGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           NG  I    D +  E    +I G L+ I N      G+Y CV+ + V  +ST   ++V+G
Sbjct: 542 NGQLIDFQRDSDHFERVGGSISGDLM-IRNIQLNHGGKYVCVIDTDVESLSTSAILVVKG 600

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
           PPG P  V V E+  ++A + WT G  NG PIT Y + ART +   W       +    +
Sbjct: 601 PPGPPDKVSVEEITDSTAQLSWTPGRDNGSPITGYIVQARTPFTVGW-----QAVDTVPE 655

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
              G    +    L  W  YEF+V+A N +G GEPS  S +  T    P  AP+ +GGGG
Sbjct: 656 VVNGNMLTATVVGLNAWVEYEFRVVARNAVGLGEPSPASAKTRTEDAIPDTAPTDVGGGG 715

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
           G   +L I+WEP+P E QN     Y I +R      +    +    +    V R  +   
Sbjct: 716 GTKSELVITWEPVPEELQNGEGFGYIIAFRPVGTVTWTRAVIST--SAARYVFRNDTIPP 773

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
           ++ ++VKV A N+ G GP S +
Sbjct: 774 FSPFDVKVGAYNNRGEGPFSSI 795



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 161/666 (24%), Positives = 251/666 (37%), Gaps = 95/666 (14%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +  L     +Q DAG Y C  +++       G     ++  H+       P+        
Sbjct: 283 NAVLEIPNFQQEDAGTYECMAENRRGKNAARG-----RISFHAK------PHWLQTMADT 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           A      +  EC A G P PSY+W + G  +  +   +  N  L+I ++   D G Y C 
Sbjct: 332 ALSIEGNLFWECKANGKPKPSYSWLKNGEQVMADGRVQIENGALSISSLNRSDSGMYQCV 391

Query: 470 ASNDRSALESSVTISIQAEP-NFT-IPLTDK-HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  + + A P  F+  PL       + +++T  C+    P     W +  
Sbjct: 392 AENKHGIIYSSAQLMVLASPPTFSKSPLRALLKARSGSEVTLECKPQASPPAISLWKKGN 451

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E+L         +    + D  L I  +  +RD A Y C AKNQ  T  ++ +L ++T  
Sbjct: 452 EILQ------RTERIALLPDGTLKIANVT-KRDAASYTCIAKNQFGTASTTGRL-IVTEP 503

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKDGNIIGSGGRRKIFE----- 639
                RP   E   GE  ++ + C   + P     F W  +G +I        FE     
Sbjct: 504 TRITMRPTNMEIIVGE--SIVLPCQIASDPALDVSFSWAFNGQLIDFQRDSDHFERVGGS 561

Query: 640 -NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
            +G+L+I  +  +  G Y C   T+V  +  S   ++V+ GP      P K+++      
Sbjct: 562 ISGDLMIRNIQLNHGGKYVCVIDTDVESLSTSA--ILVVKGP---PGPPDKVSV------ 610

Query: 698 QLRCSAHTEELLD--VAYIWT---HNGVRIG----------NMDLNELETPNINIDGGLL 742
                   EE+ D      WT    NG  I            +    ++T    ++G +L
Sbjct: 611 --------EEITDSTAQLSWTPGRDNGSPITGYIVQARTPFTVGWQAVDTVPEVVNGNML 662

Query: 743 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 795
             T        EYE   V ++ VG       S KT      P   P  V      K+   
Sbjct: 663 TATVVGLNAWVEYEFRVVARNAVGLGEPSPASAKTRTEDAIPDTAPTDVGGGGGTKSELV 722

Query: 796 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
           I W    +   NG     Y I  R     TW   +  VI     RY  R +      + P
Sbjct: 723 ITWEPVPEELQNGEGF-GYIIAFRPVGTVTW---TRAVISTSAARYVFRND-----TIPP 773

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           +S ++ KV A N  G G  SS +  Y+   + P  AP R+         + +SWE LP  
Sbjct: 774 FSPFDVKVGAYNNRGEGPFSSIAVVYSA-EEVPSVAPKRVRARSVSAAQIEVSWEALPTI 832

Query: 913 KQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            +     Y  ++W    K DT  +      Y  V I  ++  + +Y     + V A N  
Sbjct: 833 PERVLG-YEVMYWEDDTKPDTIGKVRLSGNYTLVNITGLKANTAYY-----LSVAAFNTA 886

Query: 971 GPGPES 976
           GPGP+S
Sbjct: 887 GPGPQS 892


>gi|358418120|ref|XP_600040.6| PREDICTED: contactin-4 [Bos taurus]
          Length = 1026

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 264/794 (33%), Positives = 396/794 (49%), Gaps = 35/794 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 25  GPIFIQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVEGSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLQFAYLENFKPRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RQGQGMVLLCGPPAHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P A   G  V+LEC A 
Sbjct: 193 TCVVTNTVTNQKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+   A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTIIWRRADGKPIATKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVAKGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN++  + D H+  + ++ W C+A G P  TY W +NGE       PL  +DR  
Sbjct: 311 TFYAQPNWSQKINDIHVAIEENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIH 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+ + P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+PKP   WKK  +++    R  I E+G+L I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPKPVHTWKKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L+V   P+     P  + +    ++ L C    +  L++ + W+ NG  I 
Sbjct: 483 FGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GPPG P 
Sbjct: 542 FDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W  V  + + + +D   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+ E +P E QN     Y + +R      +    L    +    V R  S   ++ +EV
Sbjct: 717 VITCETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEV 775

Query: 963 KVQAINDVGPGPES 976
           KV   N+ G GP S
Sbjct: 776 KVGVFNNKGEGPFS 789



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 147/650 (22%), Positives = 235/650 (36%), Gaps = 60/650 (9%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVAKGQLTFYAQPNWSQKI--NDIHVAIEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL            L I  V + D G Y C 
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIHIEQGTLNITIVNLSDAGMYQCV 385

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   ++W +  
Sbjct: 386 AENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVHTWKKGR 445

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 446 DVL-------KENERITISEDG-SLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G +I        FE      
Sbjct: 497 PTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGQD 556

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 557 SAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 616

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 617 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 673

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLP-----GGVQVVEVHKTSATIQWTDGATNGR 806
            V  + +G     + S K       P   P     GG    E+  T  T+   +   NGR
Sbjct: 674 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITCETVP--EELQNGR 731

Query: 807 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
               Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  
Sbjct: 732 GF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNK 783

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + 
Sbjct: 784 GEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYW 841

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 842 RHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPAS 889


>gi|301784957|ref|XP_002927893.1| PREDICTED: contactin-3-like [Ailuropoda melanoleuca]
          Length = 1027

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 264/797 (33%), Positives = 399/797 (50%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FI++P++ +F +        ITL+C A G P+P Y W        +L  + I+   
Sbjct: 24  QGPVFIREPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDINLSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D GSY C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EYRYKLNGGNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSTVTNAKVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGATVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         FN +L IP+ + ED G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGLPFSNKIKLRKFNGVLEIPDFQQEDTGSYECIAENSRGRNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVEIAVEDNLFWECRASGKPKPSYRWLKNGEALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLN-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKTPMKKLIQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+PKP   WKK   I+    R    ++G L I+ V++ D G Y+C A N
Sbjct: 424 GSMVSLDCKPRASPKPLCSWKKGDVIVQENERISFLKDGGLKIANVTKADVGTYTCIAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G      RL+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALT 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGIDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIVPFSLYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 160/660 (24%), Positives = 248/660 (37%), Gaps = 83/660 (12%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q D G+Y C  ++     GRN     L  +   ++ QL       K   
Sbjct: 278 FNGVLEIPDFQQEDTGSYECIAEN---SRGRNVARGRLTYYAKPHWVQLI------KDVE 328

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 329 IAVE--DNLFWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKTPMKKLIQVQVGSMVSLDCKPRASPKPLCSWKKG 446

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
             ++       E++   F++D  L I  +  + D   Y C A+NQ      + +L V+T 
Sbjct: 447 DVIVQ------ENERISFLKDGGLKIANVT-KADVGTYTCIAENQFGKANGTTRL-VVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 499 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALTDFKKDGSHFEKVGG 556

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +         
Sbjct: 557 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTT 613

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  +        +    +       +G      +  P + IDG     T        E
Sbjct: 614 AQLSWKEGIDNHSPVISYSVQARTPFSVGWQTATTV--PEV-IDGKTHTATVVELNPWVE 670

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 671 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPE 726

Query: 801 GATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
              NG     +  ++ +  TNW      +   V   +  RY  R E+     +VP+S YE
Sbjct: 727 ELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES-----IVPFSLYE 775

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N  
Sbjct: 776 VKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNTIPWKLSNGH 834

Query: 918 NIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            + Y++ +W   N  E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 835 LLGYEVRYW--NNGEEESSSKVKVGGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 888


>gi|395520400|ref|XP_003764321.1| PREDICTED: contactin-5 [Sarcophilus harrisii]
          Length = 1015

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 267/809 (33%), Positives = 397/809 (49%), Gaps = 37/809 (4%)

Query: 176 YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 235
           + + IE+ D    GP F+++P D++F     S    + L+C A G P P+Y W +     
Sbjct: 3   FSVSIESVD---YGPVFVQEPDDIIFPTD--SDEKKVALNCEARGNPVPNYRWLRN---- 53

Query: 236 DRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
                  +D  SD R++L  GNLIIN+P + +D G Y C  +N  GSI+S    L F ++
Sbjct: 54  ----GTELDLESDYRYSLIEGNLIINNPSEAKDAGHYQCLTANSLGSILSREAILQFAYL 109

Query: 296 GEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GAL 353
           G F+ + R+     +  G  + C PP + P + Y W  + FP+FV ED R F+S + G L
Sbjct: 110 GNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNL 169

Query: 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAP 411
           Y S ++  D G+Y C V++ V++     P  PL +       +   K   +FP  F    
Sbjct: 170 YISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFP--FMVTA 227

Query: 412 KAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRAS 471
             G  V++EC A G PVP+ +W +    +P  A       +L IPNV+++D G Y CRA 
Sbjct: 228 AKGMTVKMECFALGNPVPTISWMKVNGYIPSKARLRKSQGVLEIPNVQLDDAGIYECRAE 287

Query: 472 NDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
           N R        + +   P++   L D H+D+ + L W C+A G P  TY W +NG     
Sbjct: 288 NSRGRNSFRGQLQVYNYPHWVEKLNDTHLDSGSPLRWECKATGKPRPTYRWLKNG----- 342

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
             +PL  Q R  + + VL I  +N + D  MYQC A+N+  + Y+SA+L+VL   P F  
Sbjct: 343 --VPLLAQSRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGSIYASAELKVLASAPVFAL 399

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 651
             L+      +G  V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ 
Sbjct: 400 NQLKKTIIITKGQEVLIECKPQGSPKPTISWKKGDKAVRESKRIAILPDGSLRILNASKP 459

Query: 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
           D G Y C   NV G  E    + V   P+  E  P KI +    ++ L C A  +  LDV
Sbjct: 460 DEGKYICRGENVFGSAEILASVFVKE-PTRIELTPKKIELTVGESIVLNCKAIHDASLDV 518

Query: 712 AYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           ++ WT  G  I    +    E+         L I N     AG Y C V++T   +S + 
Sbjct: 519 SFYWTLKGQPIDFEKERGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 578

Query: 771 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 830
            ++V GPPG PG V V E+  ++AT+ W+  A N  PI+ Y + AR+ ++  W  V    
Sbjct: 579 DLLVRGPPGPPGIVIVEEITDSTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV---- 634

Query: 831 IGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
             K V +  TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP
Sbjct: 635 --KTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 692

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           + + G  G+  +L I+WEP+  E QN     Y + +R  N T    E +    +    + 
Sbjct: 693 ANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIY 751

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           R  S    T +EVKV   N+ G GP S +
Sbjct: 752 RDESVPPLTPFEVKVGVYNNKGDGPFSNI 780


>gi|200057|gb|AAA17403.1| neuronal glycoprotein [Mus musculus]
          Length = 1028

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 266/797 (33%), Positives = 394/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVDSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDTSL 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           D R+ L+GGNLI+ +P +  D GSY C A+N  G+I+S   +L F ++  F  +    + 
Sbjct: 74  DHRYKLNGGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R  VS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRLVSQETGHLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++T   G   PL +       +   K    FP+T P A   G  VRLEC A
Sbjct: 194 YTCVVTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVRLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P P       FN +L I N + ED G Y   A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGMPFPNKIKLRKFNGMLEIQNFQQEDTGSYEGIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P +   L D  +  +  L W C A G P  +Y W +NG+ L  E       +R 
Sbjct: 312 LTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKNGDALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F + P++       
Sbjct: 365 QIENGALTITNLN-VTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNPMKKMVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P+    WKK   ++    R     +G L I  V++ D+G Y+CTA N
Sbjct: 424 GSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + +A   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALT 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + WT+G  +  P+  Y + ART ++  W +V    + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSV--RTVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+++A N++G GEPS PS +  T    P  APS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +    +    N    V R  S   ++ YE
Sbjct: 717 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 149/599 (24%), Positives = 227/599 (37%), Gaps = 77/599 (12%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C A N  
Sbjct: 333 DSLYWECRASGKPKPSYRWLKNGDALVLEERIQIENGALTITNLNVTDSGMFQCIAENKH 392

Query: 475 SALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNS 531
             + SS  + + A  P+F+     K +  Q    +   C+    P    S+++ G+++  
Sbjct: 393 GLIYSSAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRA-LSFWKKGDMM-- 449

Query: 532 ETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
               + +Q R  F+ D  L I  +  + D   Y C A+NQ      +  L V+T      
Sbjct: 450 ----VREQARVSFLNDGGLKIMNVT-KADAGTYTCTAENQFGKANGTTHL-VVTEPTRII 503

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW---------KKDGNIIGSGGRRKIFE 639
             P   +   GE  +V + C  +  P     F W         KKDG+     G      
Sbjct: 504 LAPSNMDVAVGE--SVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSS--- 558

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
           +G+L+I  +    SG Y C          S   LIV   P   E +  K+        QL
Sbjct: 559 SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDEITDTTAQL 616

Query: 700 RCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE- 756
             +  T+    V    +       +G   +  +  P + IDG     T        EYE 
Sbjct: 617 SWTEGTDSHSPVISYAVQARTPFSVGWQSVRTV--PEV-IDGKTHTATVVELNPWVEYEF 673

Query: 757 -CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------T 799
             V  + +G         K+ T+       P  + GG       ++   I W        
Sbjct: 674 RIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGG----SRSELVITWDPVPEELQ 729

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +G   G  +  ++ +  T W      +   V   +  RY  R E+     +VP+S YE K
Sbjct: 730 NGGGFGY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IVPFSPYEVK 777

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  APS I        ++ +SW  +P +  N   +
Sbjct: 778 VGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSNGHLL 836

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPES 976
            Y++ +      E  S  +K  GN   AV+R + S   YYT     V+A N  G GP S
Sbjct: 837 GYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYT----AVRAYNSAGAGPFS 891


>gi|126327110|ref|XP_001364316.1| PREDICTED: contactin-5 [Monodelphis domestica]
          Length = 1015

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 264/809 (32%), Positives = 397/809 (49%), Gaps = 37/809 (4%)

Query: 176 YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 235
           + + IE+ D    GP F+++P D++F     S    + L+C A G P P+Y W +     
Sbjct: 3   FSVSIESVD---YGPVFVQEPDDIIFPTD--SDEKKVALNCEARGNPVPNYRWLRN---- 53

Query: 236 DRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
                  ID  SD R++L  GNLII++P + +D G Y C  +N  GSI+S    L F ++
Sbjct: 54  ----GTEIDLESDYRYSLIEGNLIISNPSEAKDSGHYQCLTANFLGSILSREAVLQFAYL 109

Query: 296 GEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GAL 353
           G F+ +    +   +  G  + C PP + P + Y W  + FP+FV ED R F+S + G L
Sbjct: 110 GNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNL 169

Query: 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAP 411
           Y S ++  D G+Y C V++ V++     P  PL +       +   K   +FP     A 
Sbjct: 170 YISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYMVTAA- 228

Query: 412 KAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRAS 471
             G  V++EC A G PVP+ +W +    +P  A       +L IPNV+++D G Y CRA 
Sbjct: 229 -KGMTVKMECFALGNPVPTISWMKVNGYIPSKARLRKSQGVLEIPNVQLDDAGIYECRAE 287

Query: 472 NDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
           N R        + +   P++   L D H+D+ + L W C+A G P  TY W +NG     
Sbjct: 288 NSRGRNSFRGQLQVYNYPHWVEKLNDTHLDSGSALRWECKATGKPRPTYRWLKNG----- 342

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
             +PL  Q R  + + +L I  +N + D  MYQC A+N+  + Y+SA+L+VL   P+F  
Sbjct: 343 --VPLLSQSRVEMVNGILMIHNVN-QSDAGMYQCLAENKYGSIYASAELKVLASAPAFAL 399

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 651
             L+      +G  V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ 
Sbjct: 400 NQLKKTIIITKGQEVLIECKPQGSPKPTISWKKGDKAVRESKRIAILPDGSLRILNASKS 459

Query: 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
           D G Y C   NV G  E    + V   P+  E  P +  +    ++ L C A  +  LDV
Sbjct: 460 DEGKYICQGENVFGSAEILASVFVKE-PTRIELTPKRTELTVGESVVLNCKAIHDTSLDV 518

Query: 712 AYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           ++ WT  G  I    +    E+         L I N     AG Y C V++T   +S + 
Sbjct: 519 SFYWTLKGQPIDFEKERGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEA 578

Query: 771 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 830
            ++V GPPG PG V V E+ +T+AT+ W+  A N  PI+ Y + AR+ ++  W  V    
Sbjct: 579 DLLVRGPPGPPGIVIVEEITETTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV---- 634

Query: 831 IGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
             K V +  TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP
Sbjct: 635 --KTVPEVITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAP 692

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           + + G  G+  +L I+WEP+  E QN     Y + +R  N T    E +    +    + 
Sbjct: 693 ANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIY 751

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           R  S    T +EVKV   N+ G GP S +
Sbjct: 752 RDESVPPLTPFEVKVGVYNNKGDGPFSNI 780


>gi|355786012|gb|EHH66195.1| Neural cell surface protein F3 [Macaca fascicularis]
          Length = 1018

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 277/835 (33%), Positives = 419/835 (50%), Gaps = 43/835 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKTWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A ++  LD+ ++W+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           I NA    AG Y C  ++ V   S    ++V GPPG PGG+++ ++  TS  + W+ G+ 
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSD 629

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           N  PI+ Y I  +T  +  W +        +     G  EA+    L+PW  YEF+V+A 
Sbjct: 630 NHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N LG GEPS PS +  T    P  APS +GGGGG+  +L+I+W PL RE     N  Y +
Sbjct: 685 NTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIV 744

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            ++  +  E++  T+    + G  V +  +    T ++VKV+A N+ G GP S V
Sbjct: 745 AFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 136/596 (22%), Positives = 231/596 (38%), Gaps = 78/596 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 397 YGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITDPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 508 ILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 567

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 568 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 625

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 626 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 761 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD-GATNGR---------PIT- 809
           +T+G+          G P +P     ++    +  +  +D G   GR         P++ 
Sbjct: 685 NTLGR----------GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSR 732

Query: 810 --HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV 
Sbjct: 733 EYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVK 785

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N  G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y
Sbjct: 786 AFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRY 844

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
                K+        T +EY        R+ +    T+Y ++V A N  G GP S+
Sbjct: 845 WAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSD 894


>gi|7657361|ref|NP_055276.1| contactin-6 precursor [Homo sapiens]
 gi|55976622|sp|Q9UQ52.1|CNTN6_HUMAN RecName: Full=Contactin-6; AltName: Full=Neural recognition
           molecule NB-3; Short=hNB-3; Flags: Precursor
 gi|5631291|dbj|BAA82612.1| neural adhesion molecule NB-3 [Homo sapiens]
 gi|86577727|gb|AAI13119.1| Contactin 6 [Homo sapiens]
 gi|119584275|gb|EAW63871.1| contactin 6, isoform CRA_a [Homo sapiens]
 gi|119584276|gb|EAW63872.1| contactin 6, isoform CRA_a [Homo sapiens]
          Length = 1028

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 267/805 (33%), Positives = 396/805 (49%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    +++ L+C A GYP+P Y W +           
Sbjct: 20  DGLLSRPIFTQEPHDVIFPLDLSK----SEVILNCAANGYPSPHYRWKQN--------GT 67

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 68  DIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 127

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 128 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 187

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 188 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 245

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 246 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 305

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + H+    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 306 NLAKGQLIFYAPPEWEQKIQNTHLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE---- 361

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 362 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 417

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
           +++   GG++ I C P A P+    WK+    +    R  + E+G+L I  ++R D+G Y
Sbjct: 418 KSFVQVGGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSY 477

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 478 TCIATNQFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 536

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 537 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADII 593

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 594 VRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVAT 648

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 649 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIH 708

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S
Sbjct: 709 GGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNES 767

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 768 IIPLSPFEVKVGVYNNEGEGSLSTV 792



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 291/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 262 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N     +       D +  EC A G P P Y W + G  L      +
Sbjct: 314 FYAPPEWEQ-KIQNTHLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 366 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 426 DIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 479 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 536 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 596 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 653 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 766 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGTGPSS 891


>gi|380788833|gb|AFE66292.1| contactin-3 precursor [Macaca mulatta]
          Length = 1028

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 397/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--EKITLNCEARGNPSPHYRW--------QLNGSDIDTTM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGAYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D     +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+ +  WKK    +    R  + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 160/656 (24%), Positives = 246/656 (37%), Gaps = 74/656 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL       K   
Sbjct: 278 FNGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLI------KDVE 328

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 329 TAVE--DSLYWECRASGKPKPSYRWLKNGAALVLEERIQIENGALTISNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-KK 445

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           G++   E   +       ++D  L I  +  + D   Y C A+NQ      +  L V+T 
Sbjct: 446 GDVSVQEHARIS-----LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 499 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGG 556

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +         
Sbjct: 557 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTT 613

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  +        +    I       +G   +  +  P + IDG     T        E
Sbjct: 614 AQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVE 670

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 671 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPE 726

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
              NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE KV
Sbjct: 727 ELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKV 778

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
              N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   + 
Sbjct: 779 GVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLG 837

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 838 YEVRYWNGGGKEKSSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 889


>gi|109035942|ref|XP_001101862.1| PREDICTED: contactin-3-like [Macaca mulatta]
          Length = 1028

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 397/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--EKITLNCEARGNPSPHYRW--------QLNGSDIDTTM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D     +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTITNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+ +  WKK    +    R  + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 160/656 (24%), Positives = 246/656 (37%), Gaps = 74/656 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL       K   
Sbjct: 278 FNGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLI------KDVE 328

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 329 TAVE--DSLYWECRASGKPKPSYRWLKNGAALVLEERIQIENGALTITNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-KK 445

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           G++   E   +       ++D  L I  +  + D   Y C A+NQ      +  L V+T 
Sbjct: 446 GDVSVQEHARIS-----LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 499 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGG 556

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +         
Sbjct: 557 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTT 613

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  +        +    I       +G   +  +  P + IDG     T        E
Sbjct: 614 AQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVE 670

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 671 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPE 726

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
              NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE KV
Sbjct: 727 ELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKV 778

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
              N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   + 
Sbjct: 779 GVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLG 837

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 838 YEVRYWNGGGKEESSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 889


>gi|387762905|ref|NP_001248680.1| contactin 1 precursor [Macaca mulatta]
 gi|402885642|ref|XP_003906258.1| PREDICTED: contactin-1 isoform 1 [Papio anubis]
 gi|355564139|gb|EHH20639.1| Neural cell surface protein F3 [Macaca mulatta]
 gi|380787725|gb|AFE65738.1| contactin-1 isoform 1 precursor [Macaca mulatta]
          Length = 1018

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 277/835 (33%), Positives = 419/835 (50%), Gaps = 43/835 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A ++  LD+ ++W+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           I NA    AG Y C  ++ V   S    ++V GPPG PGG+++ ++  TS  + W+ G+ 
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSD 629

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           N  PI+ Y I  +T  +  W +        +     G  EA+    L+PW  YEF+V+A 
Sbjct: 630 NHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N LG GEPS PS +  T    P  APS +GGGGG+  +L+I+W PL RE     N  Y +
Sbjct: 685 NTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIV 744

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            ++  +  E++  T+    + G  V +  +    T ++VKV+A N+ G GP S V
Sbjct: 745 AFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 136/596 (22%), Positives = 231/596 (38%), Gaps = 78/596 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 397 YGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITDPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 508 ILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 567

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 568 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 625

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 626 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 761 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD-GATNGR---------PIT- 809
           +T+G+          G P +P     ++    +  +  +D G   GR         P++ 
Sbjct: 685 NTLGR----------GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSR 732

Query: 810 --HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV 
Sbjct: 733 EYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVK 785

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N  G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y
Sbjct: 786 AFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRY 844

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
                K+        T +EY        R+ +    T+Y ++V A N  G GP S+
Sbjct: 845 WAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSD 894


>gi|355559498|gb|EHH16226.1| hypothetical protein EGK_11479 [Macaca mulatta]
          Length = 1028

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 397/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--EKITLNCEARGNPSPHYRW--------QLNGSDIDTSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D     +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+ +  WKK    +    R  + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 160/656 (24%), Positives = 246/656 (37%), Gaps = 74/656 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL       K   
Sbjct: 278 FNGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLI------KDVE 328

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 329 TAVE--DSLYWECRASGKPKPSYRWLKNGAALVLEERIQIENGALTISNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-KK 445

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           G++   E   +       ++D  L I  +  + D   Y C A+NQ      +  L V+T 
Sbjct: 446 GDVSVQEHARIS-----LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 499 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGG 556

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +         
Sbjct: 557 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTT 613

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  +        +    I       +G   +  +  P + IDG     T        E
Sbjct: 614 AQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVE 670

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 671 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPE 726

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
              NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE KV
Sbjct: 727 ELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKV 778

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
              N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   + 
Sbjct: 779 GVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLG 837

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 838 YEVRYWNGGGKEESSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 889


>gi|426341233|ref|XP_004035953.1| PREDICTED: contactin-3 [Gorilla gorilla gorilla]
          Length = 1028

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 263/797 (32%), Positives = 398/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDMSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERT 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+ +  WKK    +    R  +  +G L I+ V++ D+GIY+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGIYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 158/657 (24%), Positives = 246/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FSGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDSLYWECRASGKPKPSYRWLKNGAALVLEERTQIENGALTISNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-KK 445

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   + D  L I  +  + D  +Y C A+NQ      +  L V+T
Sbjct: 446 GDV------SVQEHERISLLNDGGLKIANVT-KADAGIYTCMAENQFGKANGTTHL-VVT 497

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGG 633
                   P   +   GE  +V + C  +  P     F W         KKDG+     G
Sbjct: 498 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVG 555

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
                 +G+L+I  +    SG Y C          S   LIV   P   E +        
Sbjct: 556 GSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDT 612

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
              L  +        +    I       +G   +  +  P + IDG     T        
Sbjct: 613 TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWV 669

Query: 754 EYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT--- 799
           EYE   V  + +G         K+ T+  V    P  + GG       ++   I W    
Sbjct: 670 EYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVP 725

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE K
Sbjct: 726 EELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVK 777

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   +
Sbjct: 778 VGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLL 836

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            Y++ +   +  E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 837 GYEVRYWNGSGKEESSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 889


>gi|291392425|ref|XP_002712732.1| PREDICTED: contactin 1 [Oryctolagus cuniculus]
          Length = 1076

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 269/795 (33%), Positives = 401/795 (50%), Gaps = 41/795 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S+   ++L+C A   P P Y+W        R+    +D  SD
Sbjct: 115 GPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD 164

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 165 -RYSMVGGNLVINNPDKQKDAGVYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 223

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 224 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGN 283

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 284 YSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFAL 341

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R   +    I 
Sbjct: 342 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIINIQLEDEGLYECEAENIRGRDKHQAKIY 401

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 402 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHRGELRLYD------ 455

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 456 ------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGG 505

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +G R  I+E+G+L I+ ++R D G+Y+C A N  
Sbjct: 506 RVIIECKPKAAPKPKFSWSKGTEWLVNGSRILIWEDGSLEINNITRSDGGVYTCFAENNR 565

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L++   P+     P    I    N  ++C+A  +  LD+ ++W+ NG  I  
Sbjct: 566 GKANSTGTLVITD-PTRIILAPLNADITVGENATMQCAASFDSALDLTFVWSFNGYVIDF 624

Query: 725 MDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 625 NKENIHYQRNFMLDNNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 684

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ +V  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 685 LRIEDVRATSVALTWSRGSDNHSPISKYTIQTKTQLSDGWKDAK-----TDPPIIEGNME 739

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 740 AAKAVDLIPWMEYEFRVVATNTLGLGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELT 799

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  S    T ++VK
Sbjct: 800 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDESMSPSTAFQVK 858

Query: 964 VQAINDVGPGPESEV 978
           V+A N  G GP S +
Sbjct: 859 VKAFNSKGDGPYSLI 873



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 134/595 (22%), Positives = 224/595 (37%), Gaps = 74/595 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    R          L + +V  E+ G Y C A N 
Sbjct: 420 GSDLYWPCVATGKPIPTIRWLKNGYAYHRGE--------LRLYDVTFENAGMYQCIAENT 471

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLN 530
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L 
Sbjct: 472 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 531

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           + +  L  +D     +N+          D  +Y C A+N      S+  L V+T      
Sbjct: 532 NGSRILIWEDGSLEINNIT-------RSDGGVYTCFAENNRGKANSTGTL-VITDPTRII 583

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGNL 643
             PL ++   GE   +    + ++A    FVW  +G +I        ++       NG L
Sbjct: 584 LAPLNADITVGENATMQCAASFDSALDLTFVWSFNGYVIDFNKENIHYQRNFMLDNNGEL 643

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S 
Sbjct: 644 LIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDVRATSVALTWSR 701

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
            ++    ++        ++ +   +    P I I+G +            EYE   V  +
Sbjct: 702 GSDNHSPISKYTIQTKTQLSDGWKDAKTDPPI-IEGNMEAAKAVDLIPWMEYEFRVVATN 760

Query: 762 TVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT--- 809
           T+G         KI T        P  + GG           TI W        P++   
Sbjct: 761 TLGLGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSREY 809

Query: 810 HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           HY      I+A   ++   W  V+  V   +  RY  + E+     + P + ++ KV A 
Sbjct: 810 HYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDES-----MSPSTAFQVKVKAF 862

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N  G G P S     N+  D P +AP+ +G       ++S+ W+ +  +      I Y  
Sbjct: 863 NSKGDG-PYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVENYQIRYWA 921

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              K+        + +EY        R+ +    T+Y V+V A N  G GP S+V
Sbjct: 922 AHDKEAAAHRVQVSSQEYS------ARLENLLPDTQYFVEVGACNSAGCGPSSDV 970


>gi|395733521|ref|XP_002813554.2| PREDICTED: LOW QUALITY PROTEIN: contactin-4 isoform 2 [Pongo
           abelii]
          Length = 1026

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 262/791 (33%), Positives = 397/791 (50%), Gaps = 36/791 (4%)

Query: 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRF 251
           FI++P+ V+F L        + L+C       P   W        +L    +D   D R+
Sbjct: 29  FIQEPSPVMFPLDSEE--KKVKLNCEVKEIQKPHIRW--------KLNGTDVDTGMDFRY 78

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQN 310
           ++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +   + 
Sbjct: 79  SVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRG 138

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCN 369
            G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY+C 
Sbjct: 139 QGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNYTCV 196

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYP 427
           V + V++    GP  PL +       +   K    FP+T P A   G  V+LEC A G P
Sbjct: 197 VTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKLECFALGNP 254

Query: 428 VPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
           VP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   ++  
Sbjct: 255 VPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFY 314

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
           A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  +DR  I+ 
Sbjct: 315 AQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQ 367

Query: 547 NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV 606
             L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T    GG V
Sbjct: 368 GTLNITIVNLS-DAGMYQCLAENKHGVIFSNAELNVIAVGPDFSRTLLKRVTLVKVGGEV 426

Query: 607 TIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
            I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C A+N  G 
Sbjct: 427 VIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIASNHFGT 486

Query: 667 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NM 725
             S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ NG  I  + 
Sbjct: 487 ASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDR 545

Query: 726 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 785
           D +  E    +  G L+ I N     AG+Y C+V+++V ++S    +IV GPPG P  V 
Sbjct: 546 DGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVT 604

Query: 786 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
           + E+  T+A + W  G  N  PIT Y I ART ++  W  VS   + + +D   G+   +
Sbjct: 605 IDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTA 659

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
               L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L I+
Sbjct: 660 TVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVIT 719

Query: 906 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
           WE +P E QN     Y + +R      +    L    +    V R  S   ++ +EVKV 
Sbjct: 720 WETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVG 778

Query: 966 AINDVGPGPES 976
             N+ G GP S
Sbjct: 779 VFNNKGEGPFS 789



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 146/648 (22%), Positives = 235/648 (36%), Gaps = 57/648 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 278 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 332

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 333 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCL 386

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +++ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 387 AENKHGVIFSNAELNVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 446

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 447 DIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIASNHFGTASSTGNL-VVKD 497

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 498 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDS 557

Query: 641 -GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+L+I  +    +G Y C          +   LIV   P   E +           L  
Sbjct: 558 AGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSW 617

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
           R        + +  I       +G   ++ +  P + IDG     T        EYE   
Sbjct: 618 RPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFRT 674

Query: 758 VVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPIT 809
           V  + +G     + S K       P   P  V      K+   I W    +   NGR   
Sbjct: 675 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF- 733

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G G
Sbjct: 734 GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG 786

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKK 928
            P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR +
Sbjct: 787 -PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRHE 844

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 845 -DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 889


>gi|355746565|gb|EHH51179.1| hypothetical protein EGM_10513 [Macaca fascicularis]
          Length = 1028

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 397/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--EKITLNCEARGNPSPHYRW--------QLNGSDIDTSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D     +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVETAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTITNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+ +  WKK    +    R  + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 160/656 (24%), Positives = 246/656 (37%), Gaps = 74/656 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL       K   
Sbjct: 278 FNGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLI------KDVE 328

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 329 TAVE--DSLYWECRASGKPKPSYRWLKNGAALVLEERIQIENGALTITNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-KK 445

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           G++   E   +       ++D  L I  +  + D   Y C A+NQ      +  L V+T 
Sbjct: 446 GDVSVQEHARIS-----LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 499 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGG 556

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +         
Sbjct: 557 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTT 613

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  +        +    I       +G   +  +  P + IDG     T        E
Sbjct: 614 AQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVE 670

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 671 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPE 726

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
              NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE KV
Sbjct: 727 ELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKV 778

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
              N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   + 
Sbjct: 779 GVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLG 837

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 838 YEVRYWNGGGKEESSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGVGP 889


>gi|317418928|emb|CBN80966.1| Contactin-3 [Dicentrarchus labrax]
          Length = 1026

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 268/802 (33%), Positives = 397/802 (49%), Gaps = 35/802 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D I +GP +  +P+D++  ++      + T++C A G     Y W         L   LI
Sbjct: 23  DVIFQGPRWRTEPSDLILPINSPD--QEATITCEAEGSSPLQYRW--------SLNGTLI 72

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D  +D R  +SGG+LII++  + +D G Y C A N +G+I+S    L F ++  F  +  
Sbjct: 73  DLGNDYRRHMSGGSLIISNLDKDQDTGVYQCTAFNTWGAILSRRASLQFAYLDNFKSQTV 132

Query: 304 PEIGN--QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQ 360
               N  +  G  + C PP +   + + W  + +P FV++D R F+S + G+LY + +E 
Sbjct: 133 RSAVNVREGQGVVLLCGPPAHSGELTFAWIFNEYPYFVQQDSRRFISQETGSLYIAKVES 192

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVR 418
            D GNY+C V + V+         PL +       +   K   +FP + P A ++   V+
Sbjct: 193 SDVGNYTCVVNNTVTREKVLSSPTPLVLRSDGVMGEYEPKIEVHFPDSVPAAKES--VVK 250

Query: 419 LECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC A G PVP  +W R  G P P     +N N +L IPN++ ED G Y C A N R   
Sbjct: 251 LECFALGNPVPEISWRRTSGIPFPSKVKMKNSNAVLEIPNLQQEDAGTYECMAENRRGKN 310

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
            +   IS  A+P++   +TD  +  + +L W C+A G P  +YSW +NG+ + +E     
Sbjct: 311 AARGRISFHAKPHWLQTMTDTALSIEENLFWECKATGKPKPSYSWLKNGDQVVAE----- 365

Query: 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE 597
              R  I++  L+I  LN   D  MYQC A+N+    YSSAQL VL   PSF K PL + 
Sbjct: 366 --GRVQIENGALSIAALN-LSDSGMYQCVAENKHGIIYSSAQLMVLASPPSFSKSPLRAL 422

Query: 598 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
             A  G  VT+ C P+A+P    +WKK   I+    R  +  NG L I+ V+R D+  Y+
Sbjct: 423 LKARSGSEVTLECKPQASPPAISLWKKGNEILQRTERITLLPNGTLKITNVTRRDAASYT 482

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N  G   + GRLI+   P+     P  + I    ++ L C    +  LDV++ W  
Sbjct: 483 CVAKNQFGTASTTGRLIITE-PTRITMRPTNMEIIVGESIVLPCQIACDPALDVSFSWAF 541

Query: 718 NGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           NG  I    D +  E    +I G L+ I N      G+Y CV+ + V  +ST   ++V+G
Sbjct: 542 NGQLIDFQRDSDHFERVGGSISGDLM-IRNIQLNHGGKYVCVIDTDVESLSTSAILVVKG 600

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
           PPG P  V V E+  ++A + WT G  NG PIT Y I ART +   W       +    +
Sbjct: 601 PPGPPDKVAVEEITDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGW-----QAVDTVPE 655

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
              G    +    L  W  YEF+V+A N +G GEPS  S +  T    P  AP+ +GGGG
Sbjct: 656 VVNGNMLTATVVGLNAWVEYEFRVVARNTVGLGEPSPASTKTRTEDAIPDTAPTDVGGGG 715

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
           G   +L I+WEP+P E QN     Y I +R      +    +   G V   V R  +   
Sbjct: 716 GTKSELVITWEPVPEELQNGEGFGYIIAFRPVGTVTWTRAVISTPG-VARYVFRNDTIPP 774

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
           ++ ++VKV A N+ G GP S +
Sbjct: 775 FSPFDVKVGAYNNRGEGPFSSI 796



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 164/666 (24%), Positives = 252/666 (37%), Gaps = 94/666 (14%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +  L    L+Q DAG Y C  +++       G     ++  H+    L+   +   +  E
Sbjct: 283 NAVLEIPNLQQEDAGTYECMAENRRGKNAARG-----RISFHAKPHWLQTMTDTALSIEE 337

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  +  EC A G P PSY+W + G  +      +  N  L+I  + + D G Y C 
Sbjct: 338 ------NLFWECKATGKPKPSYSWLKNGDQVVAEGRVQIENGALSIAALNLSDSGMYQCV 391

Query: 470 ASNDRSALESSVTISIQAEP-NFT-IPLTDK-HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  + + A P +F+  PL       + +++T  C+    P     W +  
Sbjct: 392 AENKHGIIYSSAQLMVLASPPSFSKSPLRALLKARSGSEVTLECKPQASPPAISLWKKGN 451

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E+L         +    + +  L I  +   RD A Y C AKNQ  T  ++ +L ++T  
Sbjct: 452 EILQ------RTERITLLPNGTLKITNVT-RRDAASYTCVAKNQFGTASTTGRL-IITEP 503

Query: 587 PSFKKRPLESETYAGEGGNV--TIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE----- 639
                RP   E   GE   +   I C+P  A    F W  +G +I        FE     
Sbjct: 504 TRITMRPTNMEIIVGESIVLPCQIACDP--ALDVSFSWAFNGQLIDFQRDSDHFERVGGS 561

Query: 640 -NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
            +G+L+I  +  +  G Y C   T+V  +  S   ++V+ GP      P K+ +      
Sbjct: 562 ISGDLMIRNIQLNHGGKYVCVIDTDVESLSTSA--ILVVKGP---PGPPDKVAV------ 610

Query: 698 QLRCSAHTEELLD--VAYIWT---HNGVRIG----------NMDLNELETPNINIDGGLL 742
                   EE+ D      WT    NG  I            +    ++T    ++G +L
Sbjct: 611 --------EEITDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVVNGNML 662

Query: 743 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 795
             T        EYE   V ++TVG       STKT      P   P  V      K+   
Sbjct: 663 TATVVGLNAWVEYEFRVVARNTVGLGEPSPASTKTRTEDAIPDTAPTDVGGGGGTKSELV 722

Query: 796 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
           I W    +   NG     Y I  R     TW        G  V RY  R +      + P
Sbjct: 723 ITWEPVPEELQNGEGF-GYIIAFRPVGTVTWTRAVISTPG--VARYVFRNDT-----IPP 774

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           +S ++ KV A N  G G  SS +  Y+   + P  AP R+         + + WE LP  
Sbjct: 775 FSPFDVKVGAYNNRGEGPFSSIATVYSA-EEVPSVAPKRVRTRSVSAVQIEVIWEALPAI 833

Query: 913 KQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            +     Y  ++W    K DT  +      Y  V I  ++  + +Y     + V A N  
Sbjct: 834 PERVLG-YEAVYWEDDTKPDTVGKVRISGNYTLVNITGLKANTVYY-----LSVAAFNTA 887

Query: 971 GPGPES 976
           GPGP+S
Sbjct: 888 GPGPQS 893


>gi|291384023|ref|XP_002708477.1| PREDICTED: contactin 5 [Oryctolagus cuniculus]
          Length = 1108

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 260/796 (32%), Positives = 389/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C + G P PSY W +            ID  SD
Sbjct: 107 GPVFVQEPDDIIFPTD--SDEKKVALNCESRGNPVPSYRWLRN--------GTEIDLESD 156

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N FGSI+S    L F ++G F+ + R+    
Sbjct: 157 YRYSLIEGTFIISNPSEAKDAGHYQCLATNTFGSILSREAILQFAYLGNFSGRTRSAVSV 216

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 217 REGQGVVLLCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQASDVGSY 276

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 277 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 334

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  +       +L IPNV+++D G Y CRA N R        + 
Sbjct: 335 GNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNVQLDDAGIYECRAENARGKNSFRGQLQ 394

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  T+ W +NG        PL  Q R  +
Sbjct: 395 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTFRWLKNGA-------PLLPQSRVEM 447

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +G 
Sbjct: 448 VNGVLMIHSVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFAPNQLKKTIIVTKGR 506

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +GNL I   S+ D G Y C   N+ 
Sbjct: 507 EVEIECKPQGSPKPAISWKKGDKAVRENKRIAILPDGNLRILNASKSDEGKYVCRGENIF 566

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    + V   P+  E  P +I +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 567 GSAEIVASVSVKE-PTRIELTPKRIELTVGESIVLNCKAIHDASLDVNFFWTLKGQPIEF 625

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 626 EKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGV 685

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ +++AT+ W+  A N  P+T Y + AR+ ++  W  V      K V +  TG  
Sbjct: 686 VIVEEITESTATLSWSPAADNHSPVTSYNLQARSPFSLGWQTV------KTVPEIITGDM 739

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L
Sbjct: 740 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHEL 799

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EV
Sbjct: 800 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 858

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 859 KVGVYNNKGDGPFSQI 874



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 15/124 (12%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 913
            Y F V A N  GYG PSS      T    P QAPS  R    G ++   S+ WEP+    
Sbjct: 955  YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVRSLA 1010

Query: 914  QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
              +  + YK+F+R++  T  Q  ET K       AVV +P    Y    ++V+A ++ G 
Sbjct: 1011 NESEVLGYKVFYRQEGHTNSQVIETQKPQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1062

Query: 973  GPES 976
            G  S
Sbjct: 1063 GTNS 1066


>gi|348575287|ref|XP_003473421.1| PREDICTED: contactin-6-like [Cavia porcellus]
          Length = 1067

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 269/799 (33%), Positives = 395/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P F ++P DV+F  DLS+    ++I L+C A GYP+P Y W +            ID   
Sbjct: 65  PIFTQEPQDVIFPLDLSR----SEIILNCAASGYPSPHYRWKQN--------GTYIDFTR 112

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           +  + L GG L I+ P   +D G+Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 113 NYHYKLDGGRLAISSPHTDQDIGTYQCLATNVLGTILSRKAKLQFAYIEDFETKTRSTVS 172

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+EDKR FVS + G LY + +E  D GN
Sbjct: 173 VREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDVGN 232

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C V +K +     GP  PL     ++    ++       FPE  +A     V+LEC A
Sbjct: 233 YTCFVTNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 290

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  GS LP          IL IPN + ED+G Y C A N R    +   
Sbjct: 291 LGNPVPDISWRRLDGSLLPGKVKHSKSQAILEIPNFQEEDEGFYECIAGNLRGRNLAKGQ 350

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + H+     L W C+A G P+  Y W +NGE LNSE       +R 
Sbjct: 351 LIFYAPPEWEQKIQNTHLSIYDSLYWECKASGKPNPWYMWLKNGERLNSE-------ERI 403

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++  +    
Sbjct: 404 QIENGTLTISMLN-MSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKSPIKKNSIVQI 462

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG++TI C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y+C ATN
Sbjct: 463 GGDITIECKPNAFPRAAISWKRGTENVRQSKRVFLSEDGSLKIHNVTRSDAGPYTCVATN 522

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W+ NGV I
Sbjct: 523 QFGNAKNTGSLIVKE-RTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVIFVWSFNGVII 581

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +  T    I G   G L I N   + +G+Y C V++T+  +S    +IV GPPG
Sbjct: 582 ---DLQKRVTHFERIGGESVGDLMIRNIQLSHSGKYLCTVQTTLESLSAVADIIVRGPPG 638

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ I W  G  N  PI  + +  RT ++  W       +    +   
Sbjct: 639 PPEDVRVEHISSTTSQISWRPGPDNNSPIQIFTVQTRTPFSVGW-----QAVATVPEILN 693

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L  W  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG  
Sbjct: 694 GQTYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNINGGGGGR 753

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S    + 
Sbjct: 754 YELVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVALVESSRF-VYRNESIMSLSP 812

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G GP S +
Sbjct: 813 FEVKVGVYNNEGEGPLSTM 831



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 184/795 (23%), Positives = 288/795 (36%), Gaps = 100/795 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNK 279
           SY W   D   YVQ+           DKR  +S   GNL I    +  D G+Y C  +NK
Sbjct: 193 SYAWTFNDNPLYVQE-----------DKRRFVSQETGNLYIAK-VEPSDVGNYTCFVTNK 240

Query: 280 FGSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYY 329
                 +      VQ   G +GE+  K   R PE     ++    + C    N P  +  
Sbjct: 241 EAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDIS 299

Query: 330 WAR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
           W R      P  V+  K         L     ++ D G Y C   +     GRN     L
Sbjct: 300 WRRLDGSLLPGKVKHSKS-----QAILEIPNFQEEDEGFYECIAGNL---RGRNLAKGQL 351

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
             +    ++Q K  N     +       D +  EC A G P P Y W + G  L      
Sbjct: 352 IFYAPPEWEQ-KIQNTHLSIY-------DSLYWECKASGKPNPWYMWLKNGERLNSEERI 403

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ-- 503
           +  N  LTI  + + D G Y C A N    + ++  + + A  P+F+     K+   Q  
Sbjct: 404 QIENGTLTISMLNMSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKSPIKKNSIVQIG 463

Query: 504 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
            D+T  C+    P    SW R  E +       + +  +  +D  L I  +    D   Y
Sbjct: 464 GDITIECKPNAFPRAAISWKRGTENVR------QSKRVFLSEDGSLKIHNVT-RSDAGPY 516

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 621
            C A NQ     ++  L ++  +      P + +   GE  ++ + C     P  +  FV
Sbjct: 517 TCVATNQFGNAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVIFV 573

Query: 622 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           W  +G II    R   FE       G+L+I  +    SG Y CT         +   +IV
Sbjct: 574 WSFNGVIIDLQKRVTHFERIGGESVGDLMIRNIQLSHSGKYLCTVQTTLESLSAVADIIV 633

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735
              P   E +  +   +    +  R        + +  + T     +G   +  +  P I
Sbjct: 634 RGPPGPPEDVRVEHISSTTSQISWRPGPDNNSPIQIFTVQTRTPFSVGWQAVATV--PEI 691

Query: 736 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 784
            ++G     T    +   EYE   V  +++G          + TK +V    P  + GG 
Sbjct: 692 -LNGQTYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNINGGG 750

Query: 785 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
                 +    I W    +   NG     Y I+ R   ++TW    E V   E  R+  R
Sbjct: 751 G----GRYELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVALVESSRFVYR 803

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            E+     ++  S +E KV   N  G G  S+ S  Y +  D+P  AP  +        +
Sbjct: 804 NES-----IMSLSPFEVKVGVYNNEGEGPLSTMSIVY-SGEDEPQLAPRGMSVQSFSASE 857

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           + +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y 
Sbjct: 858 MEVSWNAVAWNRNTGRVLGYEVLYWTDDSKESTVGKIRVSGNV--TTKNITGLKANTIYF 915

Query: 962 VKVQAINDVGPGPES 976
             V+A N  G GP S
Sbjct: 916 ASVRAYNTAGTGPSS 930


>gi|6981246|ref|NP_037357.1| contactin-6 precursor [Rattus norvegicus]
 gi|55976162|sp|P97528.1|CNTN6_RAT RecName: Full=Contactin-6; AltName: Full=Neural recognition
           molecule NB-3; Flags: Precursor
 gi|1752645|dbj|BAA13320.1| NB-3 [Rattus norvegicus]
          Length = 1028

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 268/799 (33%), Positives = 395/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P FI++P DV+F  DLS+    ++I LSC A GYP+P Y W +            ID   
Sbjct: 26  PIFIQEPQDVIFPLDLSR----SEIILSCTASGYPSPHYRWKQN--------GTDIDFSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L I+ PR  +D G Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 74  TYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKSRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+EDKR FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C V +K +     GP  PL     ++    ++       FPE  +A     V+LEC A
Sbjct: 194 YTCFVTNKEAHRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  GSP+P    + N    L IP  + ED+G Y C A N R    +   
Sbjct: 252 LGNPVPDISWRRLDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C+A G P+ +Y+W +NGE LN+E       +R 
Sbjct: 312 LIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGERLNTE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
             ++  L I  LN   D  +YQC A+N+ +T Y++A+LRVL   P F K P++  +    
Sbjct: 365 QTENGTLIITMLNVS-DSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+++I C P A PK    WK+    +    R    E+G+L I  V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G  +S G LIV    +     P K+ +    ++ L C    +  ++V ++W  NG  I
Sbjct: 484 QFGNGKSSGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVI 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +       I G   G L I N     +G+Y C V++T+ ++S    +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G  N  PI  + I  RT ++  W       +    +   
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG  
Sbjct: 655 GQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSR 714

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WEP+P E QN     Y I +R    T +  E +    +    + R  S    + 
Sbjct: 715 SELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVALVESSKF-IYRNESIMPLSP 773

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S V
Sbjct: 774 FEVKVGVYNNEGEGSLSTV 792



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 190/793 (23%), Positives = 293/793 (36%), Gaps = 96/793 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNK 279
           SY+W   D   YVQ+           DKR  +S   GNL I    +  D G+Y C  +NK
Sbjct: 154 SYDWTFNDNPLYVQE-----------DKRRFVSQNTGNLYIAK-VEPSDVGNYTCFVTNK 201

Query: 280 FGSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYY 329
                 +      VQ   G +GE+  K   R PE     ++    + C    N P  +  
Sbjct: 202 EAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDIS 260

Query: 330 WAR-DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
           W R D  P      K  + +    L     +Q D G Y C   +     GRN     L  
Sbjct: 261 WRRLDGSP---MPGKVKYSNSQATLEIPKFQQEDEGFYECVAGNL---RGRNLAKGQLIF 314

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN 448
           +    ++Q K  N +   +       D +  EC A G P PSY W + G  L      + 
Sbjct: 315 YAPPEWEQ-KIQNTYLSIY-------DSLFWECKASGNPNPSYTWLKNGERLNTEERIQT 366

Query: 449 FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--AD 505
            N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   D
Sbjct: 367 ENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGD 426

Query: 506 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 565
           ++  C+    P  + SW R  E L       + +  +F++D  L I  +    D   Y C
Sbjct: 427 ISIECKPNAFPKASISWKRGTENLK------QSKRVFFLEDGSLKICNVT-RSDAGSYTC 479

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWK 623
            A NQ     SS  L ++  +      P + +   GE  ++ + C     P  +  FVW 
Sbjct: 480 VATNQFGNGKSSGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPTMEVLFVWY 536

Query: 624 KDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677
            +G++I        FE       G+L+I  +    SG Y CT         +   +IV  
Sbjct: 537 FNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRG 596

Query: 678 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 737
            P   E +  +   +    L  R        + +  I T     +G   +  +  P I +
Sbjct: 597 PPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI-L 653

Query: 738 DGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQV 786
           +G     T    +   EYE   V  + +G          + TK ++    P  + GG   
Sbjct: 654 NGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGG- 712

Query: 787 VEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
               ++   I W    +   NG     Y I+ R   ++TW    E V   E  ++  R E
Sbjct: 713 ---SRSELVITWEPIPEELQNGEGF-GYIIMFRPVGSTTWMK--EKVALVESSKFIYRNE 766

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           +     ++P S +E KV   N  G G  S+ S  Y+   D+P  AP           D+ 
Sbjct: 767 S-----IMPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPRLAPRGTSVQSFSASDME 820

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           +SW  +   +     + Y++ +   N  E     ++  GNV      I      T Y   
Sbjct: 821 VSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRANTIYFAS 878

Query: 964 VQAINDVGPGPES 976
           V+A N  G GP S
Sbjct: 879 VRAYNTAGTGPSS 891


>gi|31980846|ref|NP_059079.2| contactin-6 precursor [Mus musculus]
 gi|55976601|sp|Q9JMB8.2|CNTN6_MOUSE RecName: Full=Contactin-6; AltName: Full=Neural recognition
           molecule NB-3; Short=mNB-3; Flags: Precursor
 gi|26343141|dbj|BAC35227.1| unnamed protein product [Mus musculus]
 gi|49903291|gb|AAH76594.1| Contactin 6 [Mus musculus]
          Length = 1028

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 266/799 (33%), Positives = 396/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P FI++P DV+F  DLS+    ++I L+C A GYP+P Y W +            ID   
Sbjct: 26  PIFIQEPQDVIFPLDLSR----SEIILTCTANGYPSPHYRWKQN--------GTDIDFGM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L I+ PR  +D G Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 74  TYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+EDKR FVS D G LYF+ +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V +K +     GP  PL +       +   K    FP+T   A  +   ++LEC A
Sbjct: 194 YTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDS--SIKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  GSP+P    +     IL IP  + ED+G Y C A N R    +   
Sbjct: 252 LGNPVPDISWKRLDGSPMPGKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C+A G P+ +Y+W +NG+ LN+E       +R 
Sbjct: 312 LIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGQRLNTE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +T Y++A+LRVL   P F K P++  +    
Sbjct: 365 QIENGTLIITMLNIS-DSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+++I C P A PK    WK+    +    R    E+G+L I  V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G  +S G L+V    +     P K+ +    ++ L C    +  ++V ++W  NG  I
Sbjct: 484 QFGNGKSSGGLVVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +       I G   G L I N     +G+Y C V++T+ ++S    +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G  N  PI  + I  RT ++  W       +    +   
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG  
Sbjct: 655 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSR 714

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y + +R    T +  E +    +    + R  S    + 
Sbjct: 715 SELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSP 773

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S V
Sbjct: 774 FEVKVGVYNNEGEGSLSTV 792



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 218/590 (36%), Gaps = 59/590 (10%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  EC A G P PSY W + G  L      +  N  L I  + + D G Y C A N  
Sbjct: 333 DSLFWECKASGNPNPSYTWLKNGQRLNTEERIQIENGTLIITMLNISDSGIYQCAAENKY 392

Query: 475 SALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + ++  + + A  P+F+     K    Q   D++  C+    P  + SW R  E L  
Sbjct: 393 QTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLK- 451

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                + +   F++D  L I  +    D   Y C A NQ     SS  L V+  +     
Sbjct: 452 -----QSKRVLFLEDGSLKICNVT-RADAGSYTCVATNQFGNGKSSGGL-VVKERTIITV 504

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GNL 643
            P + +   GE  ++ + C     P  +  FVW  +G+II        FE       G+L
Sbjct: 505 PPSKMDVTVGE--SIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGESVGDL 562

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I  +    SG Y CT         +   +IV   P   E +  +   +    L  R   
Sbjct: 563 MIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGP 622

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
                + +  I T     +G   +  +  P I ++G     T    +   EYE   V  +
Sbjct: 623 DNNSPIQIFTIQTRTPFSVGWQAVATV--PEI-LNGQTYNATVVGLSPWVEYEFRVVAGN 679

Query: 762 TVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP-- 807
            +G          + TK +V    P   PG +      ++   I W    +   NG    
Sbjct: 680 NIGIGEPSKPSELLRTKASV----PNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFG 735

Query: 808 -ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
            I  ++ +  T W      + E V   E  ++  R E+     ++P S +E KV   N  
Sbjct: 736 YIVMFRPVGTTAW------MKERVALVESSKFIYRNES-----IMPLSPFEVKVGVYNNE 784

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G G  S+ +  Y+   D+P  AP           ++ +SW  +   +     + Y++ + 
Sbjct: 785 GEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYW 843

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
             N  E     ++  GNV      I      T Y   V+A N  G GP S
Sbjct: 844 TDNSKESMIGKIRVSGNV--TTKNITGLRANTIYFASVRAYNTAGTGPSS 891


>gi|114645302|ref|XP_509005.2| PREDICTED: contactin-1 isoform 12 [Pan troglodytes]
 gi|410352791|gb|JAA42999.1| contactin 1 [Pan troglodytes]
          Length = 1018

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 277/835 (33%), Positives = 418/835 (50%), Gaps = 43/835 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ ++W+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           I NA    AG Y C  ++ V   S    ++V GPPG PGG+++ ++  TS  + W+ G+ 
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSD 629

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           N  PI+ Y I  +T  +  W +        +     G  EA+    L+PW  YEF+V+A 
Sbjct: 630 NHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N LG GEPS PS +  T    P  APS +GGGGG+  +L+I+W PL RE     N  Y +
Sbjct: 685 NTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIV 744

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            ++  +  E++  T+    + G  V +  +    T ++VKV+A N+ G GP S V
Sbjct: 745 AFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 134/596 (22%), Positives = 231/596 (38%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLN 530
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L 
Sbjct: 397 YGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           + +  L  +D     +N+          D  +Y C A+N      S+  L V+T      
Sbjct: 457 NSSRILIWEDGSLEINNIT-------RNDGGIYTCFAENNRGKANSTGTL-VITDPTRII 508

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGNL 643
             P+ ++   GE   +    + + A    FVW  +G +I        ++       NG L
Sbjct: 509 LAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGEL 568

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S 
Sbjct: 569 LIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWSR 626

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
            ++    ++  +T     I + D  + +T    I+G +            EYE   V  +
Sbjct: 627 GSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATN 685

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD-GATNGR---------PIT-- 809
           T+G+          G P +P     ++    +  +  +D G   GR         P++  
Sbjct: 686 TLGR----------GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSRE 733

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 734 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDE-----TMSPSTAFQVKVKA 786

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 787 FNNKGDG-PYSLVAVINSAQDAPSEAPTEVGAKVLSSSEISVHWEHVLEKIVESYQIRYW 845

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+        T +EY        R+ +    T+Y ++V A N  G GP S++
Sbjct: 846 AAHDKEEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSDM 895


>gi|395841521|ref|XP_003793583.1| PREDICTED: contactin-1 isoform 1 [Otolemur garnettii]
          Length = 1018

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 273/807 (33%), Positives = 409/807 (50%), Gaps = 42/807 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S+   ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    +D  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVESSDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 TLMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R        I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENIRGKDRHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D          +T  +        MYQC A+N     Y++A+L++L L P+F+
Sbjct: 373 KGELRLYD----------VTFDH------AGMYQCIAENTHGAIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L IS ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEISNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D+GIY+C A N  G   + G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 477 NDAGIYTCFAENNRGKANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + ++W+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 536 LTFVWSFNGYVIDFTRENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSAS 595

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
             ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I A+T  +  W +V   
Sbjct: 596 ADLVVRGPPGPPGGLRIDDIRATSVGLTWSRGSDNHSPISKYTIQAKTILSDDWKDVK-- 653

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
               +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  AP
Sbjct: 654 ---TDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSVPSNKIRTDGAAPNVAP 710

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           S +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V 
Sbjct: 711 SDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVH 769

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  +    T ++VKV+A N+ G GP S
Sbjct: 770 KDETMSPSTAFQVKVKAFNNKGDGPYS 796



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 133/596 (22%), Positives = 226/596 (37%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    +          L + +V  +  G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGYSYHKGE--------LRLYDVTFDHAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 397 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      ++  L V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEISNIT-RNDAGIYTCFAENNRGKANNTGTL-VITDPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 508 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFTRENIHYQRNFMLDSNGE 567

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 568 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIDDIRATSVGLTWS 625

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  +++T    I+G +            EYE   V  
Sbjct: 626 RGSDNHSPISK-YTIQAKTILSDDWKDVKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 685 NTLGIGEPSVPSNKIRTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSRE 733

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 734 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVKA 786

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   N+  D P +AP+ +G       ++S+ W+ +  +      I Y 
Sbjct: 787 FNNKGDG-PYSLTAVINSAQDAPSEAPTEVGLKVLSSSEISVYWKHVLEKVVETYQIRYW 845

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               ++        + +EY        R+ +    T+Y V+V A N  G GP S+V
Sbjct: 846 AGHDREEAAHRIQVSSQEYS------ARLENLLPDTQYFVEVGACNSAGCGPPSDV 895


>gi|397489669|ref|XP_003815845.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Pan paniscus]
          Length = 1028

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 397/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDMSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCXPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERT 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+ +  WKK    +    R  +  +G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 158/657 (24%), Positives = 244/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FSGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDSLYWECRASGKPKPSYRWLKNGAALVLEERTQIENGALTISNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-KK 445

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   + D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 446 GDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVT 497

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGG 633
                   P   +   GE  +V + C  +  P     F W         KKDG+     G
Sbjct: 498 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVG 555

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
                 +G+L+I  +    SG Y C          S   LIV   P   E +        
Sbjct: 556 GSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDT 612

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
              L  +        +    I       +G   +  +  P + IDG     T        
Sbjct: 613 TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWV 669

Query: 754 EYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT--- 799
           EYE   V  + +G         K+ T+  V    P  + GG       ++   I W    
Sbjct: 670 EYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVP 725

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE K
Sbjct: 726 EELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVK 777

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   +
Sbjct: 778 VGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLL 836

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 837 GYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGTGP 889


>gi|7209914|dbj|BAA92367.1| neural recognition molecule NB-3 [Mus musculus]
          Length = 1028

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 266/799 (33%), Positives = 396/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P FI++P DV+F  DLS+    ++I L+C A GYP+P Y W +            ID   
Sbjct: 26  PIFIQEPQDVIFPLDLSR----SEIILTCTANGYPSPHYRWKQN--------GTDIDFGM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L I+ PR  +D G Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 74  TYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+EDKR FVS D G LYF+ +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V +K +     GP  PL +       +   K    FP+T   A  +   ++LEC A
Sbjct: 194 YTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDS--SIKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  GSP+P    +     IL IP  + ED+G Y C A N R    +   
Sbjct: 252 LGNPVPDISWRRLDGSPMPGKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C+A G P+ +Y+W +NG+ LN+E       +R 
Sbjct: 312 LIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGQRLNTE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +T Y++A+LRVL   P F K P++  +    
Sbjct: 365 QIENGTLIITMLNIS-DSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+++I C P A PK    WK+    +    R    E+G+L I  V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G  +S G L+V    +     P K+ +    ++ L C    +  ++V ++W  NG  I
Sbjct: 484 QFGNGKSSGGLVVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +       I G   G L I N     +G+Y C V++T+ ++S    +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G  N  PI  + I  RT ++  W       +    +   
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG  
Sbjct: 655 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSR 714

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y + +R    T +  E +    +    + R  S    + 
Sbjct: 715 SELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSP 773

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S V
Sbjct: 774 FEVKVGVYNNEGEGSLSTV 792



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 218/590 (36%), Gaps = 59/590 (10%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  EC A G P PSY W + G  L      +  N  L I  + + D G Y C A N  
Sbjct: 333 DSLFWECKASGNPNPSYTWLKNGQRLNTEERIQIENGTLIITMLNISDSGIYQCAAENKY 392

Query: 475 SALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + ++  + + A  P+F+     K    Q   D++  C+    P  + SW R  E L  
Sbjct: 393 QTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLK- 451

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                + +   F++D  L I  +    D   Y C A NQ     SS  L V+  +     
Sbjct: 452 -----QSKRVLFLEDGSLKICNVT-RADAGSYTCVATNQFGNGKSSGGL-VVKERTIITV 504

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GNL 643
            P + +   GE  ++ + C     P  +  FVW  +G+II        FE       G+L
Sbjct: 505 PPSKMDVTVGE--SIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGESVGDL 562

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I  +    SG Y CT         +   +IV   P   E +  +   +    L  R   
Sbjct: 563 MIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGP 622

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
                + +  I T     +G   +  +  P I ++G     T    +   EYE   V  +
Sbjct: 623 DNNSPIQIFTIQTRTPFSVGWQAVATV--PEI-LNGQTYNATVVGLSPWVEYEFRVVAGN 679

Query: 762 TVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP-- 807
            +G          + TK +V    P   PG +      ++   I W    +   NG    
Sbjct: 680 NIGIGEPSKPSELLRTKASV----PNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFG 735

Query: 808 -ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
            I  ++ +  T W      + E V   E  ++  R E+     ++P S +E KV   N  
Sbjct: 736 YIVMFRPVGTTAW------MKERVALVESSKFIYRNES-----IMPLSPFEVKVGVYNNE 784

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G G  S+ +  Y+   D+P  AP           ++ +SW  +   +     + Y++ + 
Sbjct: 785 GEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYW 843

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
             N  E     ++  GNV      I      T Y   V+A N  G GP S
Sbjct: 844 TDNSKESMIGKIRVSGNV--TTKNITGLRANTIYFASVRAYNTAGTGPSS 891


>gi|397522455|ref|XP_003831282.1| PREDICTED: contactin-6 isoform 1 [Pan paniscus]
          Length = 1028

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 266/805 (33%), Positives = 396/805 (49%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    +++ L+C A GYP+P Y W +           
Sbjct: 20  DGLLSRPIFTQEPHDVIFPLDLSK----SEVVLNCAANGYPSPRYRWKQN--------GT 67

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 68  DIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 127

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 128 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 187

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 188 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 245

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 246 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 305

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 306 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE---- 361

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 362 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 417

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
           +++   GG++ I C P A P+    WK+    +    R  + E+G+L I  ++R D+G Y
Sbjct: 418 KSFVQVGGDIVIGCKPNAFPRAAISWKRGRETLRQSKRIFLLEDGSLKIYNITRSDAGSY 477

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 478 TCIATNQFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 536

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 537 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADII 593

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 594 VRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVAT 648

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 649 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIH 708

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S
Sbjct: 709 GGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNES 767

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 768 IIPLSPFEVKVGVYNNEGEGSLSTV 792



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 292/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 262 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 314 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 366 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 426 DIVIGCKPNAFPRAAISWKRGRETLR------QSKRIFLLEDGSLKI-YNITRSDAGSYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 479 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 536 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 596 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 653 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 766 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGTGPSS 891


>gi|28373117|ref|NP_001834.2| contactin-1 isoform 1 precursor [Homo sapiens]
 gi|397510800|ref|XP_003825775.1| PREDICTED: contactin-1 isoform 1 [Pan paniscus]
 gi|2497301|sp|Q12860.1|CNTN1_HUMAN RecName: Full=Contactin-1; AltName: Full=Glycoprotein gp135;
           AltName: Full=Neural cell surface protein F3; Flags:
           Precursor
 gi|469043|gb|AAA67920.1| h-contactin 1 precursor [Homo sapiens]
 gi|119578226|gb|EAW57822.1| contactin 1, isoform CRA_a [Homo sapiens]
 gi|119578227|gb|EAW57823.1| contactin 1, isoform CRA_a [Homo sapiens]
          Length = 1018

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 277/835 (33%), Positives = 418/835 (50%), Gaps = 43/835 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ ++W+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           I NA    AG Y C  ++ V   S    ++V GPPG PGG+++ ++  TS  + W+ G+ 
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSD 629

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           N  PI+ Y I  +T  +  W +        +     G  EA+    L+PW  YEF+V+A 
Sbjct: 630 NHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N LG GEPS PS +  T    P  APS +GGGGG+  +L+I+W PL RE     N  Y +
Sbjct: 685 NTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIV 744

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            ++  +  E++  T+    + G  V +  +    T ++VKV+A N+ G GP S V
Sbjct: 745 AFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 134/596 (22%), Positives = 231/596 (38%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLN 530
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L 
Sbjct: 397 YGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           + +  L  +D     +N+          D  +Y C A+N      S+  L V+T      
Sbjct: 457 NSSRILIWEDGSLEINNIT-------RNDGGIYTCFAENNRGKANSTGTL-VITDPTRII 508

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGNL 643
             P+ ++   GE   +    + + A    FVW  +G +I        ++       NG L
Sbjct: 509 LAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGEL 568

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S 
Sbjct: 569 LIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWSR 626

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
            ++    ++  +T     I + D  + +T    I+G +            EYE   V  +
Sbjct: 627 GSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATN 685

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD-GATNGR---------PIT-- 809
           T+G+          G P +P     ++    +  +  +D G   GR         P++  
Sbjct: 686 TLGR----------GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSRE 733

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 734 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVKA 786

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 787 FNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYW 845

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+        T +EY        R+ +    T+Y ++V A N  G GP S++
Sbjct: 846 AAHDKEEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSDM 895


>gi|114587894|ref|XP_526232.2| PREDICTED: contactin-3 isoform 3 [Pan troglodytes]
 gi|410212392|gb|JAA03415.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
 gi|410251446|gb|JAA13690.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
 gi|410291610|gb|JAA24405.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
 gi|410329979|gb|JAA33936.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
          Length = 1028

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 397/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDMSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERT 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+ +  WKK    +    R  +  +G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 158/657 (24%), Positives = 244/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FSGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDSLYWECRASGKPKPSYRWLKNGAALVLEERTQIENGALTISNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-KK 445

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   + D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 446 GDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVT 497

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGG 633
                   P   +   GE  +V + C  +  P     F W         KKDG+     G
Sbjct: 498 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVG 555

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
                 +G+L+I  +    SG Y C          S   LIV   P   E +        
Sbjct: 556 GSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDT 612

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
              L  +        +    I       +G   +  +  P + IDG     T        
Sbjct: 613 TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWV 669

Query: 754 EYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT--- 799
           EYE   V  + +G         K+ T+  V    P  + GG       ++   I W    
Sbjct: 670 EYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVP 725

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE K
Sbjct: 726 EELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVK 777

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   +
Sbjct: 778 VGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLL 836

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 837 GYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 889


>gi|444727037|gb|ELW67545.1| Contactin-3 [Tupaia chinensis]
          Length = 996

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 399/797 (50%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        +TL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVGSED--KKVTLNCEARGNPSPHYRW--------QLNGSDIDMSL 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           +  + L+GGNL++ +P +  D GSY C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHHYKLNGGNLVVFNPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++T   G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         FN +L IPN + +D G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGLPFSSKIKQRKFNGVLEIPNFQQDDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKNGEALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  +TI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGAITISNLN-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+    WKK    +    R    ++G L I+ V++ D+G Y+CTA N
Sbjct: 424 GSLVSLDCKPRASPRALSSWKKGEVAVQEHERITFLKDGGLKIANVTKADTGSYTCTAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTLLVVTE-PTKITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALT 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               + +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKEGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   GR
Sbjct: 602 ENVKVDEITDTTAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTVT--TVPETID---GR 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ Y+
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIMPFSPYQ 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 154/657 (23%), Positives = 244/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FNGVLEIPNFQQDDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G  L      +  N  +TI N+ V D G + C
Sbjct: 330 ---AVEDNLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGAITISNLNVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-KK 445

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           GE+       +++ +R  F++D  L I  +  + D   Y C A+NQ   + +   L V+T
Sbjct: 446 GEVA------VQEHERITFLKDGGLKIANVT-KADTGSYTCTAENQFG-KANGTTLLVVT 497

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE--- 639
                   P   +   GE  +V + C  +  P     F W  +G +         FE   
Sbjct: 498 EPTKITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGALTDFKKEGSHFEKVG 555

Query: 640 ---NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
              +G+L+I  +    SG Y C          S   LIV   P   E +  K+       
Sbjct: 556 GSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--KVDEITDTT 613

Query: 697 LQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
            QL     T+    V    I       +G      + T    IDG     T        E
Sbjct: 614 AQLSWKEGTDNHSPVISYSIQARTPFSVG---WQTVTTVPETIDGRTHTATVVELNPWVE 670

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 671 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPE 726

Query: 801 GATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
              NG     +  ++ +  TNW      +   V   +  RY  R E+     ++P+S Y+
Sbjct: 727 ELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES-----IMPFSPYQ 775

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N  
Sbjct: 776 VKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIKVSWNTIPWKLSNGH 834

Query: 918 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            + Y++ +      E  S  +K  GN      R+        Y   V+A N  G GP
Sbjct: 835 LLGYEVRYWNDGGEEESSNKVKVAGNE--TSTRLQGLKSNLAYYTAVRAYNSAGAGP 889


>gi|148666976|gb|EDK99392.1| contactin 6, isoform CRA_b [Mus musculus]
          Length = 1033

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 266/799 (33%), Positives = 396/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P FI++P DV+F  DLS+    ++I L+C A GYP+P Y W +            ID   
Sbjct: 31  PIFIQEPQDVIFPLDLSR----SEIILTCTANGYPSPHYRWKQN--------GTDIDFGM 78

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L I+ PR  +D G Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 79  TYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVS 138

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+EDKR FVS D G LYF+ +E  D GN
Sbjct: 139 VREGQGVVLLCGPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGN 198

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V +K +     GP  PL +       +   K    FP+T   A  +   ++LEC A
Sbjct: 199 YTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDS--SIKLECFA 256

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  GSP+P    +     IL IP  + ED+G Y C A N R    +   
Sbjct: 257 LGNPVPDISWRRLDGSPMPGKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQ 316

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C+A G P+ +Y+W +NG+ LN+E       +R 
Sbjct: 317 LIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGQRLNTE-------ERI 369

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +T Y++A+LRVL   P F K P++  +    
Sbjct: 370 QIENGTLIITMLNIS-DSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQV 428

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+++I C P A PK    WK+    +    R    E+G+L I  V+R D+G Y+C ATN
Sbjct: 429 GGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATN 488

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G  +S G L+V    +     P K+ +    ++ L C    +  ++V ++W  NG  I
Sbjct: 489 QFGNGKSSGGLVVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII 547

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +       I G   G L I N     +G+Y C V++T+ ++S    +IV GPPG
Sbjct: 548 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 604

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G  N  PI  + I  RT ++  W       +    +   
Sbjct: 605 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 659

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG  
Sbjct: 660 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSR 719

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y + +R    T +  E +    +    + R  S    + 
Sbjct: 720 SELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSP 778

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S V
Sbjct: 779 FEVKVGVYNNEGEGSLSTV 797



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 218/590 (36%), Gaps = 59/590 (10%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  EC A G P PSY W + G  L      +  N  L I  + + D G Y C A N  
Sbjct: 338 DSLFWECKASGNPNPSYTWLKNGQRLNTEERIQIENGTLIITMLNISDSGIYQCAAENKY 397

Query: 475 SALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + ++  + + A  P+F+     K    Q   D++  C+    P  + SW R  E L  
Sbjct: 398 QTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLK- 456

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                + +   F++D  L I  +    D   Y C A NQ     SS  L V+  +     
Sbjct: 457 -----QSKRVLFLEDGSLKICNVT-RADAGSYTCVATNQFGNGKSSGGL-VVKERTIITV 509

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GNL 643
            P + +   GE  ++ + C     P  +  FVW  +G+II        FE       G+L
Sbjct: 510 PPSKMDVTVGE--SIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGESVGDL 567

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I  +    SG Y CT         +   +IV   P   E +  +   +    L  R   
Sbjct: 568 MIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGP 627

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
                + +  I T     +G   +  +  P I ++G     T    +   EYE   V  +
Sbjct: 628 DNNSPIQIFTIQTRTPFSVGWQAVATV--PEI-LNGQTYNATVVGLSPWVEYEFRVVAGN 684

Query: 762 TVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP-- 807
            +G          + TK +V    P   PG +      ++   I W    +   NG    
Sbjct: 685 NIGIGEPSKPSELLRTKASV----PNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFG 740

Query: 808 -ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
            I  ++ +  T W      + E V   E  ++  R E+     ++P S +E KV   N  
Sbjct: 741 YIVMFRPVGTTAW------MKERVALVESSKFIYRNES-----IMPLSPFEVKVGVYNNE 789

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G G  S+ +  Y+   D+P  AP           ++ +SW  +   +     + Y++ + 
Sbjct: 790 GEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYW 848

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
             N  E     ++  GNV      I      T Y   V+A N  G GP S
Sbjct: 849 TDNSKESMIGKIRVSGNV--TTKNITGLRANTIYFASVRAYNTAGTGPSS 896


>gi|297690021|ref|XP_002822428.1| PREDICTED: contactin-5 isoform 1 [Pongo abelii]
          Length = 1100

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 256/795 (32%), Positives = 383/795 (48%), Gaps = 32/795 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L C   G P+PSY W +            ID  SD
Sbjct: 98  GPVFVQEPDDIIFPTD--SDEKKVALKCEVRGNPDPSYRWLRN--------GTEIDLESD 147

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ +    +  
Sbjct: 148 YRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSAVSV 207

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 208 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 267

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 268 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 325

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R        + 
Sbjct: 326 GNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 385

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 386 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEM 438

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +  
Sbjct: 439 VNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDR 497

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 498 EVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVF 557

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 558 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 616

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 617 EEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 676

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W       +    +  TG  E
Sbjct: 677 VIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDME 731

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           +++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L 
Sbjct: 732 SAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELV 791

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EVK
Sbjct: 792 IAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVK 850

Query: 964 VQAINDVGPGPESEV 978
           V   N+ G GP S++
Sbjct: 851 VGVYNNKGDGPFSQI 865


>gi|296216730|ref|XP_002754694.1| PREDICTED: contactin-5 isoform 1 [Callithrix jacchus]
 gi|296216732|ref|XP_002754695.1| PREDICTED: contactin-5 isoform 2 [Callithrix jacchus]
          Length = 1100

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/811 (31%), Positives = 391/811 (48%), Gaps = 34/811 (4%)

Query: 174 YQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           Y    D    + +  GP F+++P D++F     S    + L+C   G P PSY W +   
Sbjct: 83  YHSSDDFRQDESVDYGPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN-- 138

Query: 234 VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                    ID  SD R++L  G  II++P + +D G Y C A+N  GSI+S+   L F 
Sbjct: 139 ------GTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSKEATLQFA 192

Query: 294 FIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-G 351
           ++G F+ + R+     +  G  + C PP + P + Y W  + FP+FV ED R F+S D G
Sbjct: 193 YLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQDTG 252

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPE 409
            LY S ++  D G+Y C V++ V++     P  PL +       +   K   +FP T   
Sbjct: 253 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 312

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           A   G  V++EC A G PVP+  W +    +P  A       +L IPNV+++D G Y CR
Sbjct: 313 A--KGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECR 370

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           A N R        + +   P++   L D  +D+ + L W C+A G P  TY W +NG   
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG--- 427

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
               +P   Q R  + + +L I  +N + D  MYQC A+N+    Y+SA+L++L   P+F
Sbjct: 428 ----VPFSPQSRVEMVNGLLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILAAAPTF 482

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
               L+      +   V I C P+ +PKP   WKK    +    R  I  +G+L I   S
Sbjct: 483 ALNQLKKTIIVTKDQEVVIECTPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNAS 542

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           + D G Y C   N+ G  E    L+ +  P+  E  P +  +    ++ L C A  +  L
Sbjct: 543 KSDEGKYVCRGENIFGSAEIIA-LLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSL 601

Query: 710 DVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           DV + WT  G  I    +    E+         L I N     AG Y C V++T   +S 
Sbjct: 602 DVTFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSD 661

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
           +  ++V GPPG PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V  
Sbjct: 662 EAELLVRGPPGPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV-- 719

Query: 829 HVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
               K V +  TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  
Sbjct: 720 ----KTVPEIITGDMESAMAVDLNPWVEYEFRVVATNLIGTGDPSTPSRMIRTNEAVPKT 775

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
           AP+ + G  G+  +L I+WEP+  E QN     Y + +R  N T    E +         
Sbjct: 776 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKF 834

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + R  S    T +EVKV   N+ G GP S++
Sbjct: 835 IYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 865


>gi|73996768|ref|XP_851830.1| PREDICTED: contactin-1 isoform 3 [Canis lupus familiaris]
          Length = 1018

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 278/833 (33%), Positives = 417/833 (50%), Gaps = 43/833 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I      L++   Y+ YG  +   DK   GP F +QP + ++   + S 
Sbjct: 1   MKMWLLVSHLVIISFTSCLSEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESP 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    ID  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDIDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPLPERTTK--PYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N+R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N   T Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTHGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   + G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ +IW+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           I NA    AG Y C  ++ V   S    ++V GPPG PGG+++ ++  TS  + W+ G+ 
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSD 629

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           N  PI+ Y I  +T  +  W +        +     G  EA+    L+PW  YEF+V+A 
Sbjct: 630 NHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N LG GEPS PS +  T    P  APS +GGGGG   +L+I+W PL RE     N  Y +
Sbjct: 685 NTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIV 744

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            ++  +  E++  T+    + G  V +  +    T ++VKV+A N+ G GP S
Sbjct: 745 AFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYS 796



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 134/595 (22%), Positives = 229/595 (38%), Gaps = 74/595 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLN 530
              + ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L 
Sbjct: 397 HGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           + +  L  +D     +N+          D  +Y C A+N  + R ++    V+T      
Sbjct: 457 NSSRILIWEDGSLEINNIT-------RNDGGIYTCFAENN-RGRANNTGTLVITDPTRII 508

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGNL 643
             P+ ++   GE   +    + + A    F+W  +G +I        ++       NG L
Sbjct: 509 LAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGEL 568

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S 
Sbjct: 569 LIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWSR 626

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
            ++    ++  +T     I + D  + +T    I+G +            EYE   V  +
Sbjct: 627 GSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATN 685

Query: 762 TVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT--- 809
           T+G         KI T        P  + GG           TI W        P++   
Sbjct: 686 TLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWV-------PLSREY 734

Query: 810 HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A 
Sbjct: 735 HYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKAF 787

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N  G G P S +   N+  D P +AP+ +G       ++S+ WE +  +   +  I Y  
Sbjct: 788 NNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVVEKIVESYQIRYWA 846

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              K+        T +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 847 AHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 895


>gi|414791|emb|CAA79696.1| contactin [Homo sapiens]
          Length = 1018

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 276/833 (33%), Positives = 417/833 (50%), Gaps = 43/833 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ ++W+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           I NA    AG Y C  ++ V   S    ++V GPPG PGG+++ ++  TS  + W+ G+ 
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSD 629

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           N  PI+ Y I  +T  +  W +        +     G  EA+    L+PW  YEF+V+A 
Sbjct: 630 NHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N LG GEPS PS +  T    P  APS +GGGGG+  +L+I+W PL RE     N  Y +
Sbjct: 685 NTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNFGYIV 744

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            ++  +  E++  T+    + G  V +  +    T ++VKV+A N+ G GP S
Sbjct: 745 AFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYS 796



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 134/596 (22%), Positives = 231/596 (38%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLN 530
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L 
Sbjct: 397 YGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           + +  L  +D     +N+          D  +Y C A+N      S+  L V+T      
Sbjct: 457 NSSRILIWEDGSLEINNIT-------RNDGGIYTCFAENNRGKANSTGTL-VITDPTRII 508

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGNL 643
             P+ ++   GE   +    + + A    FVW  +G +I        ++       NG L
Sbjct: 509 LAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGEL 568

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S 
Sbjct: 569 LIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWSR 626

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
            ++    ++  +T     I + D  + +T    I+G +            EYE   V  +
Sbjct: 627 GSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATN 685

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD-GATNGR---------PIT-- 809
           T+G+          G P +P     ++    +  +  +D G   GR         P++  
Sbjct: 686 TLGR----------GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSRE 733

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 734 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVKA 786

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 787 FNNKGDG-PYSLLAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYW 845

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+        T +EY        R+ +    T+Y ++V A N  G GP S++
Sbjct: 846 AAHDKEEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSDM 895


>gi|397516456|ref|XP_003828446.1| PREDICTED: contactin-5 [Pan paniscus]
          Length = 911

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 257/795 (32%), Positives = 384/795 (48%), Gaps = 32/795 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C   G P PSY W +            ID  SD
Sbjct: 98  GPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEIDLESD 147

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R+    
Sbjct: 148 YRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSAVSV 207

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 208 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 267

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 268 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 325

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R        + 
Sbjct: 326 GNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 385

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 386 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEM 438

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +  
Sbjct: 439 VNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDR 497

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  +  +G+L I   S+ D G Y C   NV 
Sbjct: 498 EVVIECKPQGSPKPTISWKKGDRAVRENKRIAVLPDGSLRILNASKSDEGKYVCRGENVF 557

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 558 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 616

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 617 EEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 676

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V V E+ ++SAT+ W+  A N  PI+ Y + AR+ ++  W       +    +  TG  E
Sbjct: 677 VIVEEITESSATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDME 731

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           +++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L 
Sbjct: 732 SAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELV 791

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EVK
Sbjct: 792 IAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVK 850

Query: 964 VQAINDVGPGPESEV 978
           V   N+ G GP S++
Sbjct: 851 VGVYNNKGDGPFSQI 865


>gi|148666975|gb|EDK99391.1| contactin 6, isoform CRA_a [Mus musculus]
          Length = 1028

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 266/799 (33%), Positives = 396/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P FI++P DV+F  DLS+    ++I L+C A GYP+P Y W +            ID   
Sbjct: 26  PIFIQEPQDVIFPLDLSR----SEIILTCTANGYPSPHYRWKQN--------GTDIDFGM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L I+ PR  +D G Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 74  TYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKTRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+EDKR FVS D G LYF+ +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V +K +     GP  PL +       +   K    FP+T   A  +   ++LEC A
Sbjct: 194 YTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDS--SIKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  GSP+P    +     IL IP  + ED+G Y C A N R    +   
Sbjct: 252 LGNPVPDISWRRLDGSPMPGKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C+A G P+ +Y+W +NG+ LN+E       +R 
Sbjct: 312 LIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGQRLNTE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +T Y++A+LRVL   P F K P++  +    
Sbjct: 365 QIENGTLIITMLNIS-DSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+++I C P A PK    WK+    +    R    E+G+L I  V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G  +S G L+V    +     P K+ +    ++ L C    +  ++V ++W  NG  I
Sbjct: 484 QFGNGKSSGGLVVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +       I G   G L I N     +G+Y C V++T+ ++S    +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G  N  PI  + I  RT ++  W       +    +   
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG  
Sbjct: 655 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSR 714

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y + +R    T +  E +    +    + R  S    + 
Sbjct: 715 SELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSP 773

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S V
Sbjct: 774 FEVKVGVYNNEGEGSLSTV 792



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 137/590 (23%), Positives = 218/590 (36%), Gaps = 59/590 (10%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  EC A G P PSY W + G  L      +  N  L I  + + D G Y C A N  
Sbjct: 333 DSLFWECKASGNPNPSYTWLKNGQRLNTEERIQIENGTLIITMLNISDSGIYQCAAENKY 392

Query: 475 SALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + ++  + + A  P+F+     K    Q   D++  C+    P  + SW R  E L  
Sbjct: 393 QTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLK- 451

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                + +   F++D  L I  +    D   Y C A NQ     SS  L V+  +     
Sbjct: 452 -----QSKRVLFLEDGSLKICNVT-RADAGSYTCVATNQFGNGKSSGGL-VVKERTIITV 504

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GNL 643
            P + +   GE  ++ + C     P  +  FVW  +G+II        FE       G+L
Sbjct: 505 PPSKMDVTVGE--SIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGESVGDL 562

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I  +    SG Y CT         +   +IV   P   E +  +   +    L  R   
Sbjct: 563 MIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGP 622

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
                + +  I T     +G   +  +  P I ++G     T    +   EYE   V  +
Sbjct: 623 DNNSPIQIFTIQTRTPFSVGWQAVATV--PEI-LNGQTYNATVVGLSPWVEYEFRVVAGN 679

Query: 762 TVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP-- 807
            +G          + TK +V    P   PG +      ++   I W    +   NG    
Sbjct: 680 NIGIGEPSKPSELLRTKASV----PNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFG 735

Query: 808 -ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
            I  ++ +  T W      + E V   E  ++  R E+     ++P S +E KV   N  
Sbjct: 736 YIVMFRPVGTTAW------MKERVALVESSKFIYRNES-----IMPLSPFEVKVGVYNNE 784

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G G  S+ +  Y+   D+P  AP           ++ +SW  +   +     + Y++ + 
Sbjct: 785 GEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYW 843

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
             N  E     ++  GNV      I      T Y   V+A N  G GP S
Sbjct: 844 TDNSKESMIGKIRVSGNV--TTKNITGLRANTIYFASVRAYNTAGTGPSS 891


>gi|348525482|ref|XP_003450251.1| PREDICTED: contactin-5-like [Oreochromis niloticus]
          Length = 1100

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 265/798 (33%), Positives = 387/798 (48%), Gaps = 40/798 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P DV+F L   S    + + C A G P P+Y W+        +    +D  +D
Sbjct: 100 GPVFIQEPDDVIFPLD--SDEKKVVMHCEARGNPPPTYSWY--------INGTQVDSEAD 149

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R+T   GNLII++  ++ D G Y CKA N  G ++S    L F ++G F+ K R     
Sbjct: 150 YRYTFIDGNLIISNASEITDYGKYQCKAENSIGIVLSRDALLQFAYLGAFSTKARGGVSV 209

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S D G LY S ++  D G+Y
Sbjct: 210 REGQGVVLMCTPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQDTGNLYISKVQPSDVGSY 269

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP +   A   G  VRLEC A 
Sbjct: 270 ICLVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEVHFPTSVLVA--KGVTVRLECFAL 327

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P+ A       +L IPN+++ED G Y C+A N R +      + 
Sbjct: 328 GNPVPTITWRKINGNIPKKARLRKSQAVLEIPNIQLEDSGTYECKAENPRGSTAFKGHLQ 387

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P +   + D  MD+   L W C+A G P  TY W RNG       LPL  Q R  I
Sbjct: 388 VYTLPQWVRMINDTQMDSGEKLQWECKAIGRPRPTYRWLRNG-------LPLTSQGRLEI 440

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            +  LTI  +  + D  MYQC A+N+    YS+A+L++L   P F   P+     A  G 
Sbjct: 441 VNGELTIHKVQ-QADSGMYQCVAENKYAAIYSNAELQILASAPVFVPNPI--RVIATLGK 497

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           +V++ C P+A+PKP+  WK+    I    R  +  N  L I   SR D G Y C A N  
Sbjct: 498 DVSLDCKPKASPKPRITWKRGDRRIIPNKRIMLLRNNTLKIVNSSRADEGNYVCRAENQL 557

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V          P ++ +    ++ L C A  +  LDVA+ W  N   I  
Sbjct: 558 GSAEMTAILWVKEAMRVVLS-PSRVEVTVGESVVLSCKATHDTSLDVAFQWFFNQKPINF 616

Query: 724 ---NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
                    ++T +  +D   L I N     AG+Y C  +++   +  +  ++V GPPG 
Sbjct: 617 QYDGGHFEYIQTQSSTVD---LMIRNILLKHAGKYGCRAQTSADTVFAEAELLVRGPPGP 673

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           PG V V E+  T+AT+ WT G  N  PI+ Y I AR+ ++  W       +  + +  TG
Sbjct: 674 PGVVIVEEITDTTATLSWTRGVDNHSPISTYNIQARSPFSLGW-----QTVKTDPEPVTG 728

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
             E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  APS + GG G+  
Sbjct: 729 DMESAMAVELNPWVEYEFRVVATNAIGTGDPSAPSRGVRTKEAVPSVAPSNVSGGNGRRH 788

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           +L ISWEP+  E QN     Y + +R  N T    E +    +  +   R  +    T +
Sbjct: 789 ELVISWEPVSEEFQNGEGFGYIVAFR-ANGTRGWKEKMVTSADSTMYKYRDETFPPLTPF 847

Query: 961 EVKVQAINDVGPGPESEV 978
           EVKV   N+ G GP S+V
Sbjct: 848 EVKVGVYNNKGDGPFSKV 865


>gi|402885644|ref|XP_003906259.1| PREDICTED: contactin-1 isoform 2 [Papio anubis]
          Length = 1007

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 268/795 (33%), Positives = 404/795 (50%), Gaps = 41/795 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S+   ++L+C A   P P Y+W        R+    +D  SD
Sbjct: 29  GPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD 78

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 79  -RYSMVGGNLVINNPDKQKDAGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 138 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R   +    I 
Sbjct: 256 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 316 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------ 369

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 370 ------VTFENA----GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D GIY+C A N  
Sbjct: 420 RVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNR 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L++   P+     P    I    N  ++C+A ++  LD+ ++W+ NG  I  
Sbjct: 480 GKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYVIDF 538

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 539 NKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 598

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 599 LRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 653

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG+  +L+
Sbjct: 654 AARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELT 713

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 714 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVK 772

Query: 964 VQAINDVGPGPESEV 978
           V+A N+ G GP S V
Sbjct: 773 VKAFNNKGDGPYSLV 787



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 136/596 (22%), Positives = 231/596 (38%), Gaps = 78/596 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 334 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 385

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 386 YGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 445

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 446 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITDPTRI 496

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 497 ILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 556

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 557 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 614

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 615 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 673

Query: 761 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD-GATNGR---------PIT- 809
           +T+G+          G P +P     ++    +  +  +D G   GR         P++ 
Sbjct: 674 NTLGR----------GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSR 721

Query: 810 --HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV 
Sbjct: 722 EYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVK 774

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N  G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y
Sbjct: 775 AFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRY 833

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
                K+        T +EY        R+ +    T+Y ++V A N  G GP S+
Sbjct: 834 WAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSD 883


>gi|403269328|ref|XP_003926701.1| PREDICTED: contactin-1 isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1018

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 272/809 (33%), Positives = 409/809 (50%), Gaps = 42/809 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S+   ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    +D  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNSYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 373 KGELRLYD------------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C A N  G   S G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 477 NDGGIYTCFAENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + ++W+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 536 LTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTCTAQTIVDNSSAS 595

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
             ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +    
Sbjct: 596 ADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-- 653

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
               +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  AP
Sbjct: 654 ---TDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIKTDGAAPNVAP 710

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           S +GGGGG+  +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V 
Sbjct: 711 SDVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVH 769

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +  +    T ++VKV+A N+ G GP S V
Sbjct: 770 KDETMSPSTAFQVKVKAFNNKGDGPYSLV 798



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 226/591 (38%), Gaps = 68/591 (11%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 397 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITDPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 508 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 567

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 568 LLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 625

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 626 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 761 STVGK-----ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT---HYK 812
           +T+G+      S K       P   P  V          TI W        P++   HY 
Sbjct: 685 NTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNRELTITWA-------PLSREYHYG 737

Query: 813 -----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
                I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A N  
Sbjct: 738 NNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVKAFNNK 790

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y     
Sbjct: 791 GDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHD 849

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           ++        T +EY        R+ +    T+Y ++V A N  G GP S+
Sbjct: 850 REEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSD 894


>gi|348573577|ref|XP_003472567.1| PREDICTED: contactin-5-like [Cavia porcellus]
          Length = 1133

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 256/795 (32%), Positives = 382/795 (48%), Gaps = 32/795 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P  ++F     S  N + L+C     P PSY W +            ID  SD
Sbjct: 132 GPVFVQEPDGIIFPTD--SDENKVALNCEVRANPVPSYRWLRN--------GTQIDLESD 181

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R++L  G  IIN+P + +D G Y C A+N FGSI+S    L F ++G F+ +    +  
Sbjct: 182 YRYSLIDGTFIINNPSEAKDSGQYQCLATNSFGSILSREATLQFAYLGNFSGRTRSAVSV 241

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 242 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVVEDSRRFISQETGNLYISKVQTSDVGSY 301

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 302 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 359

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  +       +L IPNV++ED G Y CRA N R        + 
Sbjct: 360 GNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNVQLEDAGIYECRAENSRGKNSFRGQLQ 419

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           I   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R   
Sbjct: 420 IYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLLPQTRIHT 472

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +  
Sbjct: 473 VNGVLMIHSVN-QSDSGMYQCLAENKYGAIYASAELKILASAPTFAPNQLKKTVIVTKDQ 531

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    +  I  +G+L I   S+ D G Y C   N+ 
Sbjct: 532 EVIIECKPQGSPKPNISWKKGDKAVRESKKIAILPDGSLRILNASKSDEGKYVCRGENIF 591

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    + V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 592 GSAEIVASVSVKE-PTKIELTPKRTELTVGESIVLNCKAIHDATLDVNFYWTLKGQPIDF 650

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             D    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 651 EKDGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 710

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W       +    +  TG  E
Sbjct: 711 VIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPETITGDME 765

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           +++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L 
Sbjct: 766 SAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELV 825

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EVK
Sbjct: 826 IAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVK 884

Query: 964 VQAINDVGPGPESEV 978
           V   N+ G GP S++
Sbjct: 885 VGVYNNKGDGPFSQI 899


>gi|403262979|ref|XP_003923841.1| PREDICTED: contactin-5 [Saimiri boliviensis boliviensis]
          Length = 1100

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/796 (32%), Positives = 387/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C   G P PSY W +            ID  SD
Sbjct: 98  GPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEIDLESD 147

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R+    
Sbjct: 148 YRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSAVSV 207

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 208 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 267

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 268 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPVTVTAA--KGTTVKMECFAL 325

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R        + 
Sbjct: 326 GNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 385

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 386 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEM 438

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL IR +N + D  MYQC A+N+    Y+SA+L++L   P+F    ++      +  
Sbjct: 439 VNGVLMIRNVN-QSDAGMYQCLAENKYGAIYASAELKILAAAPTFALNQVKKTIIVTKDR 497

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 498 EVIIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYICRGENVF 557

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 558 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPIDF 616

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 617 EEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 676

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 677 VIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEIITGDM 730

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L
Sbjct: 731 ESAMAVDLNPWVEYEFRVVATNLIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHEL 790

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EV
Sbjct: 791 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 849

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 850 KVGVYNNKGDGPFSQI 865


>gi|403297272|ref|XP_003939499.1| PREDICTED: contactin-3 [Saimiri boliviensis boliviensis]
          Length = 1028

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 396/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL+C A G P P Y W        +L  + ID  +
Sbjct: 24  QGPVFIKEPSNSIFPVGSED--KKITLNCEARGNPLPHYRW--------QLNGSDIDTNT 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDAGTYQCFATNSLGTIVSREAKLQFAYLDNFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YMCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDAEIAVEDNLYWECRASGKPKPSYRWLKNGAALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKSPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P     WKK    +    R  + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPTAHSFWKKGDVNVQEHERITLLKDGELKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  ++   + + +D   G+
Sbjct: 602 ENVRVDEITDTTAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTIT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 162/660 (24%), Positives = 254/660 (38%), Gaps = 82/660 (12%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FNGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQL---------IK 325

Query: 409 EAPKA-GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYI 467
           +A  A  D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + 
Sbjct: 326 DAEIAVEDNLYWECRASGKPKPSYRWLKNGAALVLEERIQIENGALTISNLSVTDSGMFQ 385

Query: 468 CRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFR 524
           C A N    + SS  + + A  P+F+     K +  Q    ++  C+    P   +S+++
Sbjct: 386 CIAENKHGLIYSSAELKVVASAPDFSKSPMKKLVQVQVGSLVSLDCKPRASP-TAHSFWK 444

Query: 525 NGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
            G++       +++ +R   ++D  L I  +  + D   Y C A+NQ      +  L V+
Sbjct: 445 KGDV------NVQEHERITLLKDGELKIANVT-KADAGTYTCMAENQFGKANGTTHL-VV 496

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSG 632
           T        P   +   GE  +V + C  +  P     F W         KKDG+     
Sbjct: 497 TEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKV 554

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
           G      +G+L+I  +    SG Y C          S   LIV   P   E +  ++   
Sbjct: 555 GGSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--RVDEI 609

Query: 693 AHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 750
                QL     T+    V    I       +G   +  +  P + IDG     T     
Sbjct: 610 TDTTAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTITTV--PEV-IDGKTHTATVVELN 666

Query: 751 DAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
              EYE   V  + +G         K+ T+  V    P  + GG       ++   I W 
Sbjct: 667 PWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWD 722

Query: 800 ---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
              +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S Y
Sbjct: 723 PVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPY 774

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           E KV   N  G G P SP     +  ++P  APS +        ++ +SW  +P +  N 
Sbjct: 775 EVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSHVSANSLSSSEIEVSWNTIPWKLSNG 833

Query: 917 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
             + Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 834 HLLGYEVRYWNSGGKEESSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 889


>gi|426244438|ref|XP_004016029.1| PREDICTED: contactin-5 [Ovis aries]
          Length = 1025

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 261/796 (32%), Positives = 389/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C A G P P+Y W +            ID  SD
Sbjct: 24  GPVFVQEPEDIIFPTD--SDEKKVALNCEARGNPVPNYRWLRN--------GTEIDLESD 73

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N FG+I+S  V L F ++G F+ + R+    
Sbjct: 74  YRYSLIDGAFIISNPSEAKDSGHYQCLAANTFGTILSREVILQFAYLGNFSGRTRSAVSV 133

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 134 REGQGVVLLCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 193

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 194 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 251

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  +       +L IPNV+++D G Y CRA N R        + 
Sbjct: 252 GNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNTFRGQLQ 311

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 312 VYTYPHWVEKLNDTQLDSGSHLRWECKATGKPRPTYRWLKNG-------VPLLLQSRVEM 364

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+  T Y+SA+L++L   P+F    L       +  
Sbjct: 365 VNGVLMIHNVN-QSDAGMYQCLAENKYGTIYASAELKILASAPTFALNQLRKTIIIPKDQ 423

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 424 EVIIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVF 483

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    + V   P+  E  P K  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 484 GSAEITATVSVKE-PTRIELTPKKTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPIDF 542

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 543 EKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 602

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 603 VIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPETITGDM 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L
Sbjct: 657 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EV
Sbjct: 717 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 775

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 776 KVGVYNNKGDGPFSQI 791


>gi|44890693|gb|AAH66864.1| Cntn1 protein [Mus musculus]
 gi|148672348|gb|EDL04295.1| contactin 1 [Mus musculus]
          Length = 1020

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 270/811 (33%), Positives = 414/811 (51%), Gaps = 44/811 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S+   ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    +D L++ R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDVD-LTNDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 TMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCIATGKPIPTIRWLKNGYSYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N   + Y++A+L++L L P+F+
Sbjct: 373 KGELRLYD------------VTFENA----GMYQCIAENAYGSIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVVIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C A N  G   S G L++ + P+     P    I    N  ++C+A  +  LD
Sbjct: 477 NDGGIYTCFAENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKIS 767
           + ++W+ NG  I  N ++  +    N  +D  G L I NA    AG Y C  ++ V   S
Sbjct: 536 LTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSS 595

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
               ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +  
Sbjct: 596 ASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK 655

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
                 +     G  E++    L+PW  YEF+V+A N LG GEPS PS +  T    P  
Sbjct: 656 -----TDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNV 710

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
           APS +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  
Sbjct: 711 APSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRY 769

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V +  +    T ++VKV+A N+ G GP S V
Sbjct: 770 VHKDETMTPSTAFQVKVKAFNNKGDGPYSLV 800



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 134/598 (22%), Positives = 226/598 (37%), Gaps = 78/598 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   C+A G P+P+  W + G    +          L + +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCIATGKPIPTIRWLKNGYSYHKGE--------LRLYDVTFENAGMYQCIAENA 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             ++ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 397 YGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVVIECKPKAAPKPKFSWSKGTEWLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITNPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG-------RRKIF--EN 640
              P+ ++   GE   +    + + A    FVW  +G +I           +R      N
Sbjct: 508 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDAN 567

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L 
Sbjct: 568 GELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALT 625

Query: 701 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CV 758
            S  ++    ++  +T     I + D  + +T    I+G +            EYE   V
Sbjct: 626 WSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVV 684

Query: 759 VKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 809
             +T+G         +I T        P  + GG           TI W        P++
Sbjct: 685 ATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGT----NRELTITWA-------PLS 733

Query: 810 ---HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
              HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV
Sbjct: 734 REYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MTPSTAFQVKV 786

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
            A N  G G P S     N+  D P +AP+ +G       ++S+ W+ +  +   +  I 
Sbjct: 787 KAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVESYQIR 845

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           Y     K+        T +EY        R+ +    T+Y ++V A N  G GP S+V
Sbjct: 846 YWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPSSDV 897


>gi|114639974|ref|XP_001148002.1| PREDICTED: contactin-5 isoform 2 [Pan troglodytes]
 gi|332837597|ref|XP_001147868.2| PREDICTED: contactin-5 isoform 1 [Pan troglodytes]
          Length = 1100

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/796 (32%), Positives = 385/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C   G P PSY W +            ID  SD
Sbjct: 98  GPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEIDLESD 147

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ +    +  
Sbjct: 148 YRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSAVSV 207

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 208 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 267

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 268 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 325

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R        + 
Sbjct: 326 GNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 385

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 386 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEM 438

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +  
Sbjct: 439 VNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDR 497

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 498 EVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVF 557

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 558 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 616

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 617 EEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 676

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ ++SAT+ W+  A N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 677 VIVEEITESSATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEIITGDM 730

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L
Sbjct: 731 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVRGRSGRRHEL 790

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EV
Sbjct: 791 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 849

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 850 KVGVYNNKGDGPFSQI 865


>gi|114585170|ref|XP_516244.2| PREDICTED: contactin-6 isoform 2 [Pan troglodytes]
          Length = 1028

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 265/805 (32%), Positives = 395/805 (49%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    +++ L+C A GYP+P Y W +           
Sbjct: 20  DGLLSRPIFTQEPHDVIFPLDLSK----SEVVLNCAANGYPSPRYRWKQN--------GT 67

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 68  DIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 127

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 128 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 187

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 188 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 245

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 246 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 305

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 306 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE---- 361

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 362 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 417

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
           +++   GG++ I C P   P+    WK+    +    R  + E+G+L I  ++R D+G Y
Sbjct: 418 KSFVQVGGDIVIGCKPNGFPRAAISWKRGTETLRQSKRVFLLEDGSLKIYNITRSDAGSY 477

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 478 TCIATNQFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 536

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 537 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADII 593

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 594 VRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVAT 648

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 649 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIH 708

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S
Sbjct: 709 GGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNES 767

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 768 IIPLSPFEVKVGVYNNEGEGSLSTV 792



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 188/794 (23%), Positives = 293/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 262 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 314 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 366 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+  G P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 426 DIVIGCKPNGFPRAAISWKRGTETLR------QSKRVFLLEDGSLKI-YNITRSDAGSYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 479 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 536 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 596 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 653 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 766 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGTGPSS 891


>gi|338714572|ref|XP_001497209.2| PREDICTED: contactin-6 [Equus caballus]
          Length = 1030

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 271/834 (32%), Positives = 407/834 (48%), Gaps = 54/834 (6%)

Query: 155 FICEAS-IQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDIT 213
           F+C AS +Q L   +  D             ++ R P F ++P DV+F L   +  ++I 
Sbjct: 4   FVCSASAVQGLQTRIPGD------------SRLSR-PIFTQEPQDVIFPLELSN--SEII 48

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYH 273
           L+C A GYP+P Y W +            ID      + L GG+L I+ P+  +D G+Y 
Sbjct: 49  LNCAADGYPSPHYRWKQN--------GRDIDFTMSYHYRLDGGSLAISSPQTDQDIGTYQ 100

Query: 274 CKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWAR 332
           C A+N  G+I+S   +L F +I +F  K    +   +  G  + C PP ++  ++Y W  
Sbjct: 101 CLATNPLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGPPPHFGDLSYAWTF 160

Query: 333 DYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 391
           +  P +V+ED R FVS + G LY + +E  D GNY+C + +K +     GP  PL     
Sbjct: 161 NDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQKSVQGPPTPL--VQR 218

Query: 392 SNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFEN 448
           ++    ++       FPE  +A  G  V+LEC A G PVP  +W R  GSPLP    +  
Sbjct: 219 TDGVMGEYEPKIEVRFPETIQAAKGSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSK 278

Query: 449 FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTW 508
              IL IPN + ED+G Y C A N R    +   +   A P +   + + ++     L W
Sbjct: 279 SQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYALPEWEQKIQNTYLSIYDSLLW 338

Query: 509 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 568
            C+A G P+  Y+W +NGE L+ E       +R  I++  L I  LN   D  +YQC A+
Sbjct: 339 ECKARGKPNPWYTWLKNGERLSPE-------ERIQIENGTLIITMLNLS-DSGVYQCAAE 390

Query: 569 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
           N+ +  Y++A+LRVL   P F K P++  +    GG++ I C P A P+    WK+    
Sbjct: 391 NKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGDIAIECKPIAFPRAAISWKRRAES 450

Query: 629 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP- 687
           +    R  + E+G+L I  V+R D+G Y+C ATN  G+  + G L+V         LPP 
Sbjct: 451 LKQSKRVSLLEDGSLKIYNVTRSDAGSYTCIATNQFGVARNTGSLVVKE--RTIITLPPS 508

Query: 688 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLLEI 744
           K+ +    ++ L C    +  ++V ++W+ NG  I   DL +       I G   G L I
Sbjct: 509 KMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI---DLKKGVAHFERIGGESVGDLMI 565

Query: 745 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 804
            N     +G+Y C VK+T+  +S    +IV GPPG P  V+V  +  T++ + W  G+ N
Sbjct: 566 RNIQLNHSGKYLCTVKTTLESLSAAADIIVRGPPGPPDDVRVEHISSTTSQLSWRPGSDN 625

Query: 805 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
             PI  + + ART ++  W       +    +  +G+   +    L PW  YEF+V+AGN
Sbjct: 626 NSPIQIFTVQARTPFSVGW-----QAVSTVPEILSGKTYNATVVGLSPWVEYEFRVVAGN 680

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            +G GEPS PS    T A  P  AP+ I GGGG   +L I+WE +P E QN     Y I 
Sbjct: 681 SIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYIIM 740

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            R    T +  E +    +    V R  S    + +EVKV   N  G G  S V
Sbjct: 741 LRPVGSTTWIKERVPSVESSRF-VYRNESIIPLSPFEVKVGVYNKEGEGSLSTV 793



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 187/799 (23%), Positives = 293/799 (36%), Gaps = 108/799 (13%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 155 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 203

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEIGNQNWGKA--MFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE      G +  + C    N P  +  W
Sbjct: 204 AQKSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKGSSVKLECFALGN-PVPDISW 262

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C   +     GRN     L 
Sbjct: 263 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYECIAGNL---RGRNLAKGQLI 314

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 315 FYALPEWEQ-KIQNTYLSIY-------DSLLWECKARGKPNPWYTWLKNGERLSPEERIQ 366

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + + D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 367 IENGTLIITMLNLSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVGG 426

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +    ++D  L I Y     D   Y 
Sbjct: 427 DIAIECKPIAFPRAAISWKRRAESLK------QSKRVSLLEDGSLKI-YNVTRSDAGSYT 479

Query: 565 CRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 619
           C A NQ     ++  L V     +TL PS      + +   GE  ++ + C     P  +
Sbjct: 480 CIATNQFGVARNTGSLVVKERTIITLPPS------KMDVTVGE--SIVLPCQVSHDPSIE 531

Query: 620 --FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKG 671
             FVW  +G++I        FE       G+L+I  +  + SG Y CT         +  
Sbjct: 532 VVFVWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAAA 591

Query: 672 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 731
            +IV   P   + +  +   +    L  R  +     + +  +       +G   ++ + 
Sbjct: 592 DIIVRGPPGPPDDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTV- 650

Query: 732 TPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGL 780
            P I + G     T    +   EYE   V  +++G          + TK +V V  P  +
Sbjct: 651 -PEI-LSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNI 708

Query: 781 PGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            GG       ++   I W    +   NG     Y I+ R   ++TW  + E V   E  R
Sbjct: 709 NGGGG----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTTW--IKERVPSVESSR 761

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
           +  R E+     ++P S +E KV   N+ G G  S+ S  Y+   D+P  AP        
Sbjct: 762 FVYRNES-----IIPLSPFEVKVGVYNKEGEGSLSTVSIVYSG-EDEPQLAPRGTSVQSF 815

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              ++ +SW  +   +     + Y++ +   +  E      +  GNV      I      
Sbjct: 816 SASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKTRVSGNV--TTKNITGLKAN 873

Query: 958 TEYEVKVQAINDVGPGPES 976
           T Y   V+A N  G GP S
Sbjct: 874 TVYFASVRAYNTAGTGPSS 892


>gi|6680954|ref|NP_031753.1| contactin-1 precursor [Mus musculus]
 gi|227497224|ref|NP_001153119.1| contactin-1 precursor [Mus musculus]
 gi|227497226|ref|NP_001153120.1| contactin-1 precursor [Mus musculus]
 gi|116918|sp|P12960.1|CNTN1_MOUSE RecName: Full=Contactin-1; AltName: Full=Neural cell surface
           protein F3; Flags: Precursor
 gi|50938|emb|CAA33075.1| F3 preprotein (AA -20 to 1000) [Mus musculus]
          Length = 1020

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 270/811 (33%), Positives = 414/811 (51%), Gaps = 44/811 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S+   ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    +D L++ R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDVD-LTNDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 TMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCIATGKPIPTIRWLKNGYSYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N   + Y++A+L++L L P+F+
Sbjct: 373 KGELRLYD------------VTFENA----GMYQCIAENAYGSIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C A N  G   S G L++ + P+     P    I    N  ++C+A  +  LD
Sbjct: 477 NDGGIYTCFAENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKIS 767
           + ++W+ NG  I  N ++  +    N  +D  G L I NA    AG Y C  ++ V   S
Sbjct: 536 LTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSS 595

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
               ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +  
Sbjct: 596 ASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK 655

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
                 +     G  E++    L+PW  YEF+V+A N LG GEPS PS +  T    P  
Sbjct: 656 -----TDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNV 710

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
           APS +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  
Sbjct: 711 APSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRY 769

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V +  +    T ++VKV+A N+ G GP S V
Sbjct: 770 VHKDETMTPSTAFQVKVKAFNNKGDGPYSLV 800



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 134/598 (22%), Positives = 226/598 (37%), Gaps = 78/598 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   C+A G P+P+  W + G    +          L + +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCIATGKPIPTIRWLKNGYSYHKGE--------LRLYDVTFENAGMYQCIAENA 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             ++ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 397 YGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITNPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG-------RRKIF--EN 640
              P+ ++   GE   +    + + A    FVW  +G +I           +R      N
Sbjct: 508 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDAN 567

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L 
Sbjct: 568 GELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALT 625

Query: 701 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CV 758
            S  ++    ++  +T     I + D  + +T    I+G +            EYE   V
Sbjct: 626 WSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVV 684

Query: 759 VKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 809
             +T+G         +I T        P  + GG           TI W        P++
Sbjct: 685 ATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGT----NRELTITWA-------PLS 733

Query: 810 ---HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
              HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV
Sbjct: 734 REYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MTPSTAFQVKV 786

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
            A N  G G P S     N+  D P +AP+ +G       ++S+ W+ +  +   +  I 
Sbjct: 787 KAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVESYQIR 845

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           Y     K+        T +EY        R+ +    T+Y ++V A N  G GP S+V
Sbjct: 846 YWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPSSDV 897


>gi|343168759|ref|NP_001230200.1| contactin-5 isoform 3 precursor [Homo sapiens]
          Length = 911

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 257/795 (32%), Positives = 384/795 (48%), Gaps = 32/795 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C   G P PSY W +            ID  SD
Sbjct: 98  GPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEIDLESD 147

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R+    
Sbjct: 148 YRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTRSAVSV 207

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 208 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 267

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 268 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 325

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R        + 
Sbjct: 326 GNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 385

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 386 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEM 438

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +  
Sbjct: 439 VNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQ 497

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 498 EVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVF 557

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 558 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 616

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 617 EEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 676

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W       +    +  TG  E
Sbjct: 677 VIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDME 731

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           +++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L 
Sbjct: 732 SAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELV 791

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EVK
Sbjct: 792 IAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVK 850

Query: 964 VQAINDVGPGPESEV 978
           V   N+ G GP S++
Sbjct: 851 VGVYNNKGDGPFSQI 865


>gi|332815945|ref|XP_003309633.1| PREDICTED: contactin-6 [Pan troglodytes]
          Length = 1019

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 265/805 (32%), Positives = 395/805 (49%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    +++ L+C A GYP+P Y W +           
Sbjct: 11  DGLLSRPIFTQEPHDVIFPLDLSK----SEVVLNCAANGYPSPRYRWKQN--------GT 58

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 59  DIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 118

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 119 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 178

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 179 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 236

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 237 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 296

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 297 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE---- 352

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 353 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 408

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
           +++   GG++ I C P   P+    WK+    +    R  + E+G+L I  ++R D+G Y
Sbjct: 409 KSFVQVGGDIVIGCKPNGFPRAAISWKRGTETLRQSKRVFLLEDGSLKIYNITRSDAGSY 468

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 469 TCIATNQFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 527

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 528 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADII 584

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 585 VRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVAT 639

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 640 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIH 699

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S
Sbjct: 700 GGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNES 758

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 759 IIPLSPFEVKVGVYNNEGEGSLSTV 783



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 188/794 (23%), Positives = 293/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 145 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 193

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 194 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 252

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 253 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 304

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 305 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 356

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 357 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 416

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+  G P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 417 DIVIGCKPNGFPRAAISWKRGTETLR------QSKRVFLLEDGSLKI-YNITRSDAGSYT 469

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 470 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 526

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 527 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 586

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 587 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 643

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 644 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGG 703

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 704 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 756

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 757 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 810

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 811 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 868

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 869 SVRAYNTAGTGPSS 882


>gi|223462499|gb|AAI50609.1| Contactin 3 (plasmacytoma associated) [Homo sapiens]
          Length = 1028

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 395/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVGSED--KKITLHCEARGNPSPHYRW--------QLNGSDIDMSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERT 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+    WKK    +    R  +  +G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 158/657 (24%), Positives = 244/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FSGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDSLYWECRASGKPKPSYRWLKNGAALVLEERTQIENGALTISNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-KK 445

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   + D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 446 GDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVT 497

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGG 633
                   P   +   GE  +V + C  +  P     F W         KKDG+     G
Sbjct: 498 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVG 555

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
                 +G+L+I  +    SG Y C          S   LIV   P   E +        
Sbjct: 556 GSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDT 612

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
              L  +        +    I       +G   +  +  P + IDG     T        
Sbjct: 613 TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWV 669

Query: 754 EYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT--- 799
           EYE   V  + +G         K+ T+  V    P  + GG       ++   I W    
Sbjct: 670 EYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVP 725

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE K
Sbjct: 726 EELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVK 777

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   +
Sbjct: 778 VGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLL 836

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 837 GYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 889


>gi|395841523|ref|XP_003793584.1| PREDICTED: contactin-1 isoform 2 [Otolemur garnettii]
          Length = 1007

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 269/793 (33%), Positives = 403/793 (50%), Gaps = 41/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S+   ++L+C A   P P Y+W        R+    +D  SD
Sbjct: 29  GPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD 78

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 79  -RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 138 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIYTLMGQNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R        I 
Sbjct: 256 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDRHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 316 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYHKGELRLYD------ 369

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               +T  +        MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 370 ----VTFDH------AGMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+E+G+L IS ++R+D+GIY+C A N  
Sbjct: 420 RVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEISNITRNDAGIYTCFAENNR 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   + G L++   P+     P    I    N  ++C+A  +  LD+ ++W+ NG  I  
Sbjct: 480 GKANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDF 538

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 539 TRENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 598

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I A+T  +  W +V       +     G  E
Sbjct: 599 LRIDDIRATSVGLTWSRGSDNHSPISKYTIQAKTILSDDWKDVK-----TDPPIIEGNME 653

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 654 AARAVDLIPWMEYEFRVVATNTLGIGEPSVPSNKIRTDGAAPNVAPSDVGGGGGSNRELT 713

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 714 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVK 772

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 773 VKAFNNKGDGPYS 785



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 133/596 (22%), Positives = 226/596 (37%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    +          L + +V  +  G Y C A N 
Sbjct: 334 GSDLYWPCVATGKPIPTIRWLKNGYSYHKGE--------LRLYDVTFDHAGMYQCIAENT 385

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 386 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 445

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      ++  L V+T     
Sbjct: 446 NSSRI-------LIWEDGSLEISNIT-RNDAGIYTCFAENNRGKANNTGTL-VITDPTRI 496

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 497 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFTRENIHYQRNFMLDSNGE 556

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 557 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIDDIRATSVGLTWS 614

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  +++T    I+G +            EYE   V  
Sbjct: 615 RGSDNHSPISK-YTIQAKTILSDDWKDVKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 673

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 674 NTLGIGEPSVPSNKIRTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSRE 722

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 723 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVKA 775

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   N+  D P +AP+ +G       ++S+ W+ +  +      I Y 
Sbjct: 776 FNNKGDG-PYSLTAVINSAQDAPSEAPTEVGLKVLSSSEISVYWKHVLEKVVETYQIRYW 834

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               ++        + +EY        R+ +    T+Y V+V A N  G GP S+V
Sbjct: 835 AGHDREEAAHRIQVSSQEYS------ARLENLLPDTQYFVEVGACNSAGCGPPSDV 884


>gi|335294754|ref|XP_003129849.2| PREDICTED: contactin-5 [Sus scrofa]
          Length = 1026

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/796 (32%), Positives = 388/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C A G P P+Y W +            ID  SD
Sbjct: 24  GPVFLQEPDDIIFPTD--SDEKKVALNCEARGNPVPNYRWLRN--------GTEIDLESD 73

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N FGS++S    L F ++G F+ + R+    
Sbjct: 74  YRYSLIDGTFIISNPSEAKDSGHYQCLAANTFGSVLSREAILQFAYLGNFSGRTRSAVSV 133

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 134 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 193

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 194 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 251

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  +       +L IPNV+++D G Y CRA N R        + 
Sbjct: 252 GNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 311

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 312 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLLLQSRIEM 364

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +G 
Sbjct: 365 VNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKGQ 423

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 424 EVVIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCQGENVF 483

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    + V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 484 GSAEIIASISVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 542

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 543 QKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 602

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+  ++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 603 VIVEEITDSTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEIITGDM 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L
Sbjct: 657 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EV
Sbjct: 717 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 775

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 776 KVGVYNNKGDGPFSQI 791


>gi|109108423|ref|XP_001094872.1| PREDICTED: contactin-5 isoform 3 [Macaca mulatta]
          Length = 1026

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/801 (32%), Positives = 388/801 (48%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P D++F     S    + L+C   G P PSY W +            I
Sbjct: 19  ESVDYGPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEI 68

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-R 302
           D  SD R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R
Sbjct: 69  DLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTR 128

Query: 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
           +     +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  
Sbjct: 129 SAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 188

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP T   A   G  V++
Sbjct: 189 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKM 246

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+  W +    +P  +       +L IPNV+++D G Y CRA N R     
Sbjct: 247 ECFALGNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSF 306

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q
Sbjct: 307 RGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSSQ 359

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
            R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+    
Sbjct: 360 SRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTII 418

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             +   V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C 
Sbjct: 419 VTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCR 478

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
             NV G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G
Sbjct: 479 GENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKG 537

Query: 720 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I    +    E+         L I N     AG Y C V++T   +S +  ++V GPP
Sbjct: 538 QPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPP 597

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DR 837
           G PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V + 
Sbjct: 598 GPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEI 651

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G
Sbjct: 652 ITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSG 711

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           +  +L I+WEP+  E QN     Y + +R  N T    E +         + R  S    
Sbjct: 712 RRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPL 770

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           T +EVKV   N+ G GP S++
Sbjct: 771 TPFEVKVGVYNNKGDGPFSQI 791


>gi|149728474|ref|XP_001493497.1| PREDICTED: contactin-3 [Equus caballus]
          Length = 1026

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/797 (32%), Positives = 396/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FI++P++ +F +        +TL+C A G P+P Y W        +L  + I+   
Sbjct: 22  QGPVFIREPSNSIFPVGSED--KKVTLNCEARGNPSPHYRW--------QLNGSDINLSM 71

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D GSY C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 72  EYRYKLNGGNLVVLNPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 131

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 132 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 191

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 192 YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 249

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         FN +L IPN + ED G Y C A N R    +   
Sbjct: 250 LGNPIPQINWRRSDGLPFSSKIKSRKFNGVLEIPNFQQEDAGSYECLAENSRGKNVARGR 309

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 310 LTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKNGEALVLE-------ERI 362

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 363 QIENGALTISNLN-VTDSGMFQCIAENKHGLVYSSAELKVVAAAPDFSKTPMKKLIQVQV 421

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+    WKK   I+    R    + G L I+ V++ D G Y+C A N
Sbjct: 422 GSVVSLDCKPRASPRALSSWKKGDAIVQENERISFLKGGGLKIANVTKADVGTYTCIAEN 481

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 482 QFGKANGTTYLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALT 540

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 541 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 599

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+
Sbjct: 600 ENVKVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GK 654

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 655 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 714

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YE
Sbjct: 715 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIMPFSLYE 773

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 774 VKVGVYNNKGEGPFSPV 790



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 161/663 (24%), Positives = 250/663 (37%), Gaps = 82/663 (12%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL       K   
Sbjct: 276 FNGVLEIPNFQQEDAGSYECLAEN---SRGKNVARGRLTYYAKPHWVQLI------KDVE 326

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 327 IAVE--DNLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 384

Query: 469 RASNDRSALESSVTISI-QAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + +  A P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 385 IAENKHGLVYSSAELKVVAAAPDFSKTPMKKLIQVQVGSVVSLDCKPRASPRALSSWKKG 444

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
             ++       E++   F++   L I  +  + D   Y C A+NQ      +  L V+T 
Sbjct: 445 DAIVQ------ENERISFLKGGGLKIANVT-KADVGTYTCIAENQFGKANGTTYL-VVTE 496

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 497 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGG 554

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +  K+     
Sbjct: 555 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--KVDEITD 609

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
              QL     T+    V                     P + IDG     T        E
Sbjct: 610 TTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEV-IDGKTHTATVVELNPWVE 668

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 669 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPE 724

Query: 801 GATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
              NG     +  ++ +  TNW      +   V   +  RY  R E+     ++P+S YE
Sbjct: 725 ELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES-----IMPFSLYE 773

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N  
Sbjct: 774 VKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNAVPWKLSNGH 832

Query: 918 NIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            + Y++ +W    + E  S+ +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 833 LLGYEVRYWNNGGEEELSSK-VKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGTGP 887

Query: 975 ESE 977
            S+
Sbjct: 888 FSD 890


>gi|75709184|ref|NP_065923.1| contactin-3 precursor [Homo sapiens]
 gi|296439395|sp|Q9P232.3|CNTN3_HUMAN RecName: Full=Contactin-3; AltName: Full=Brain-derived
           immunoglobulin superfamily protein 1; Short=BIG-1;
           AltName: Full=Plasmacytoma-associated neuronal
           glycoprotein; Flags: Precursor
 gi|168275494|dbj|BAG10467.1| contactin-3 precursor [synthetic construct]
          Length = 1028

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 395/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVGSED--KKITLHCEARGNPSPHYRW--------QLNGSDIDMSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERT 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+    WKK    +    R  +  +G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 158/657 (24%), Positives = 244/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FSGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDSLYWECRASGKPKPSYRWLKNGAALVLEERTQIENGALTISNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-KK 445

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   + D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 446 GDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVT 497

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGG 633
                   P   +   GE  +V + C  +  P     F W         KKDG+     G
Sbjct: 498 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVG 555

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
                 +G+L+I  +    SG Y C          S   LIV   P   E +        
Sbjct: 556 GSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDT 612

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
              L  +        +    I       +G   +  +  P + IDG     T        
Sbjct: 613 TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWV 669

Query: 754 EYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT--- 799
           EYE   V  + +G         K+ T+  V    P  + GG       ++   I W    
Sbjct: 670 EYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVP 725

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE K
Sbjct: 726 EELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVK 777

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   +
Sbjct: 778 VGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLL 836

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 837 GYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 889


>gi|363738791|ref|XP_425170.3| PREDICTED: contactin-6 [Gallus gallus]
          Length = 1054

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 258/799 (32%), Positives = 395/799 (49%), Gaps = 38/799 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
            GP FI++P D+ + +   S+  ++ L+C A GYP PSY W +            ID   
Sbjct: 50  HGPIFIQEPYDITYSMG--SVNPEVLLNCTAKGYPLPSYRWKQN--------GTDIDLTM 99

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L IN+PR+ +D G+Y C A+N FG+I+S   +L F ++  F +K    + 
Sbjct: 100 SYHYRLVGGSLAINNPRKKQDIGTYQCLATNSFGTILSRKAKLQFAYLENFEMKTRSTVS 159

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++ G+++ W  +    +V+ED+R FVS + G LY + +E  D GN
Sbjct: 160 VREGQGVVLLCGPPPHHGGLSFAWTFNNNTLYVQEDRRRFVSQETGNLYIAKVEPWDVGN 219

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVA 423
           Y+C V +  +     GP  PL +   S+    ++       FPE   A  G   +LEC A
Sbjct: 220 YTCVVTNSKAGRSVQGPPTPLTL--RSDGVMGEYEPKIEARFPETTYAAKGSSAKLECFA 277

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVPS +W R  G+ L +    +    +L IP+V+ ED G Y C A N R    +   
Sbjct: 278 LGNPVPSISWRRSDGNSLTKKIKHDKNKGVLEIPDVQQEDGGSYECIAENIRGRNIARGQ 337

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           + + A P +   + +  +     L W C+A G P  +YSW +NG+       PL  ++R 
Sbjct: 338 LFVYALPEWDKKIENAFLSLYDSLFWECKAKGKPTPSYSWLKNGQ-------PLMSEERI 390

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            +++  L I  LN   D  +YQC A+N+  T Y+SA+LRV+   P F K P++  +    
Sbjct: 391 QVENGTLIIPMLN-MSDSGLYQCVAENKYDTIYASAELRVIAAAPDFSKNPVKKTSIVQV 449

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG VTI C P A+P+    W+K   ++    R  + E+G+L +  +++ D+G+Y+C ATN
Sbjct: 450 GGEVTIGCRPSASPRAAIDWRKGPEVLRLNKRALLLEDGSLRLYNITKSDAGVYTCIATN 509

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G+  + G LIV    +     P  + +    ++ L C    +  + VA+ W+ +G +I
Sbjct: 510 QFGVARNSGNLIVKER-TVITIAPSNMDVTVGESIVLPCQVSHDPSIAVAFTWSFSGNQI 568

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              D          I G   G L I N     +G+Y C+V++T+   ST   +IV GPPG
Sbjct: 569 ---DFKRGMPHFERIGGESVGDLMIRNIQLHHSGKYVCMVQTTLDSQSTAVDIIVRGPPG 625

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T+A + W  G  N  P+  Y I  RT ++  W  VS        +   
Sbjct: 626 PPEDVRVEHISSTTAVLSWKSGKDNNSPVQIYSIQTRTPFSVGWQAVS-----TVPEVLN 680

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           GR   +    L PW  YEF+V+A N +G GEPS PS    T A  P  AP+ + GGGG  
Sbjct: 681 GRTHKATVVDLSPWVEYEFRVVARNSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGGSR 740

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WEP+P E QN     Y I +R    T +    +         V R  S    + 
Sbjct: 741 SELVITWEPVPEELQNGEGFGYIIMFRPLGSTTWTKAAVAPI-EASKYVYRNESITPLSP 799

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S +
Sbjct: 800 FEVKVGVYNNEGEGTLSSI 818



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 189/772 (24%), Positives = 289/772 (37%), Gaps = 110/772 (14%)

Query: 256 GNLIINDPRQVE--DRGSYHCKASNKFGSIISESVQ--------LAFGFIGEFNLK---R 302
           GNL I    +VE  D G+Y C  +N   S    SVQ         + G +GE+  K   R
Sbjct: 205 GNLYI---AKVEPWDVGNYTCVVTN---SKAGRSVQGPPTPLTLRSDGVMGEYEPKIEAR 258

Query: 303 APEIGNQNWGKA--MFCDPPTNYPGVNYYWAR---DYFPNFVEEDKRVFVSYDGALYFSA 357
            PE      G +  + C    N P  +  W R   +     ++ DK       G L    
Sbjct: 259 FPETTYAAKGSSAKLECFALGN-PVPSISWRRSDGNSLTKKIKHDKN-----KGVLEIPD 312

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 417
           ++Q D G+Y C  ++     GRN     L V+    + + K  N F   +       D +
Sbjct: 313 VQQEDGGSYECIAENI---RGRNIARGQLFVYALPEWDK-KIENAFLSLY-------DSL 361

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
             EC A G P PSY+W + G PL      +  N  L IP + + D G Y C A N    +
Sbjct: 362 FWECKAKGKPTPSYSWLKNGQPLMSEERIQVENGTLIIPMLNMSDSGLYQCVAENKYDTI 421

Query: 478 ESSVTIS-IQAEPNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELL--NSE 532
            +S  +  I A P+F+     K    Q   ++T  C     P     W +  E+L  N  
Sbjct: 422 YASAELRVIAAAPDFSKNPVKKTSIVQVGGEVTIGCRPSASPRAAIDWRKGPEVLRLNKR 481

Query: 533 TLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQL-----RVLTLK 586
            L LED           ++R  N  + D  +Y C A NQ     +S  L      V+T+ 
Sbjct: 482 ALLLEDG----------SLRLYNITKSDAGVYTCIATNQFGVARNSGNLIVKERTVITIA 531

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKDGNIIGSGGRRKIFEN---- 640
           PS        +   GE  ++ + C     P     F W   GN I        FE     
Sbjct: 532 PS------NMDVTVGE--SIVLPCQVSHDPSIAVAFTWSFSGNQIDFKRGMPHFERIGGE 583

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    SG Y C          +   +IV   P   E +  +   +    L 
Sbjct: 584 SVGDLMIRNIQLHHSGKYVCMVQTTLDSQSTAVDIIVRGPPGPPEDVRVEHISSTTAVLS 643

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            +        + +  I T     +G   ++ +  P + ++G   + T    +   EYE  
Sbjct: 644 WKSGKDNNSPVQIYSIQTRTPFSVGWQAVSTV--PEV-LNGRTHKATVVDLSPWVEYEFR 700

Query: 757 CVVKSTVGK---------ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATN 804
            V +++VG          + TK  V    P  + GG       ++   I W    +   N
Sbjct: 701 VVARNSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGG----SRSELVITWEPVPEELQN 756

Query: 805 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           G     Y I+ R   ++TW   +   I  E  +Y  R E+     + P S +E KV   N
Sbjct: 757 GEGF-GYIIMFRPLGSTTWTKAAVAPI--EASKYVYRNES-----ITPLSPFEVKVGVYN 808

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
             G G  SS S  Y    D+P  AP+          ++ +SW+P+   +     + Y++ 
Sbjct: 809 NEGEGTLSSISIVY-AGEDEPQIAPAGTSALSISAAEVEVSWQPVAWNRHTGRVLGYEVL 867

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +   +  E  +  ++  GNV      I      T Y   V+A N  G GP S
Sbjct: 868 YWTDDPKESTAGKVRVNGNV--TAKNITGLKANTVYFATVRAYNTAGTGPSS 917


>gi|109108421|ref|XP_001094748.1| PREDICTED: contactin-5 isoform 2 [Macaca mulatta]
          Length = 1100

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 258/801 (32%), Positives = 387/801 (48%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P D++F     S    + L+C   G P PSY W +            I
Sbjct: 93  ESVDYGPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEI 142

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D  SD R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ +  
Sbjct: 143 DLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTR 202

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  
Sbjct: 203 SAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 262

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP T   A   G  V++
Sbjct: 263 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKM 320

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+  W +    +P  +       +L IPNV+++D G Y CRA N R     
Sbjct: 321 ECFALGNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSF 380

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q
Sbjct: 381 RGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSSQ 433

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
            R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+    
Sbjct: 434 SRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTII 492

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             +   V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C 
Sbjct: 493 VTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCR 552

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
             NV G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G
Sbjct: 553 GENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKG 611

Query: 720 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I    +    E+         L I N     AG Y C V++T   +S +  ++V GPP
Sbjct: 612 QPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPP 671

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DR 837
           G PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V + 
Sbjct: 672 GPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEI 725

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G
Sbjct: 726 ITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSG 785

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           +  +L I+WEP+  E QN     Y + +R  N T    E +         + R  S    
Sbjct: 786 RRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPL 844

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           T +EVKV   N+ G GP S++
Sbjct: 845 TPFEVKVGVYNNKGDGPFSQI 865


>gi|296225698|ref|XP_002758609.1| PREDICTED: contactin-3 [Callithrix jacchus]
          Length = 1028

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/797 (32%), Positives = 397/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDTKM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           +  + L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHHYKLNGGNLLVINPNRNWDAGTYQCFATNSLGTIVSREAKLQFAYLDNFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSMVTNARVLGSPTPLMLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         FN +L I N + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFNGVLEIANFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  + +L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVEIAVEDNLYWECRASGKPKPSYRWLKNGAALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+ +  WKK    +    R  + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSFWKKGDMNVQEHERITLLKDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  ++   + + +D   G+
Sbjct: 602 ENVRVDEITDTTAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTIT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 159/657 (24%), Positives = 249/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L  +  +Q DAG+Y C  ++     G+N     L  +   ++ QL       K   
Sbjct: 278 FNGVLEIANFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLI------KDVE 328

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 329 IAVE--DNLYWECRASGKPKPSYRWLKNGAALVLEERIQIENGALTISNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P     W + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSFW-KK 445

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   ++D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 446 GDM------NVQEHERITLLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVT 497

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGG 633
                   P   +   GE  +V + C  +  P     F W         KKDG+     G
Sbjct: 498 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVG 555

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
                 +G+L+I  +    SG Y C          S   LIV   P   E +  ++    
Sbjct: 556 GSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--RVDEIT 610

Query: 694 HRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 751
               QL     T+    V    I       +G   +  +  P + IDG     T      
Sbjct: 611 DTTAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTITTV--PEV-IDGKTHTATVVELNP 667

Query: 752 AGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT- 799
             EYE   V  + +G         K+ T+  V    P  + GG       ++   I W  
Sbjct: 668 WVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDP 723

Query: 800 --DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
             +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE
Sbjct: 724 VPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYE 775

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N  
Sbjct: 776 VKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGH 834

Query: 918 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            + Y++ +      E  S  +K  GN   A  R+        Y   V+A N  G GP
Sbjct: 835 LLGYEVRYWNSGGKEESSSKVKVAGNETSA--RLLGLKSNLAYYTAVRAYNSAGAGP 889


>gi|149716431|ref|XP_001499480.1| PREDICTED: contactin-5 isoform 3 [Equus caballus]
          Length = 1026

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 258/796 (32%), Positives = 385/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C   G P P+Y W +            ID  SD
Sbjct: 24  GPVFVQEPDDIIFPAD--SDEKKVALNCEVRGNPAPNYRWLRN--------GTEIDLESD 73

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R++L  G  II++P + +D G Y C A N FGSI+S    L F ++G F+ +    +  
Sbjct: 74  YRYSLIDGTFIISNPSEAKDSGHYQCLAVNTFGSILSREAILQFAYLGNFSGRTRSAVSV 133

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 134 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 193

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP  F      G  V++EC A 
Sbjct: 194 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFP--FMVTAAKGTTVKMECFAL 251

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R        + 
Sbjct: 252 GNPVPTITWMKVNGYVPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 311

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 312 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLLPQSRVEM 364

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +G 
Sbjct: 365 VNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNHLKKTIIVTKGQ 423

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            VT+ C P+ +PKP   WKK    +    R  I  +G L I   S+ D G Y C   NV 
Sbjct: 424 EVTMECKPQGSPKPTISWKKGDKAVRENKRIAILPDGTLRILNASKSDEGKYICQGENVF 483

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 484 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 542

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 543 EKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 602

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V + E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 603 VIIEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEIITGDM 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L
Sbjct: 657 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EV
Sbjct: 717 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 775

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 776 KVGVYNNKGDGPFSQI 791



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 11/144 (7%)

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           E  +  G + + I   L   + Y F V A N  GYG PSS      T    P QAPS + 
Sbjct: 850 ETVKTRGNESSVILTGLEGNTLYHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLR 908

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIP 952
               +  +LS+ WEP+      +  + YK+F+R++  +  Q  ET K       AVV +P
Sbjct: 909 WEQ-QGSELSLGWEPVRPLANESEVLGYKVFYRQEGHSNSQVIETQKPQ-----AVVPLP 962

Query: 953 SEFYYTEYEVKVQAINDVGPGPES 976
               Y    ++V+A ++ G G  S
Sbjct: 963 DAGVYI---IEVRAYSEGGDGTAS 983


>gi|28373129|ref|NP_780775.1| contactin-5 isoform 2 precursor [Homo sapiens]
 gi|5672494|dbj|BAA36580.2| hNB-2s [Homo sapiens]
 gi|119587397|gb|EAW66993.1| contactin 5, isoform CRA_b [Homo sapiens]
          Length = 1026

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/796 (32%), Positives = 386/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C   G P PSY W +            ID  SD
Sbjct: 24  GPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEIDLESD 73

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R+    
Sbjct: 74  YRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTRSAVSV 133

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 134 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 193

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 194 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 251

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R        + 
Sbjct: 252 GNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 311

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 312 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEM 364

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +  
Sbjct: 365 VNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQ 423

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 424 EVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVF 483

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 484 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 542

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 543 EEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 602

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 603 VIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEIITGDM 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L
Sbjct: 657 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHEL 716

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EV
Sbjct: 717 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 775

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 776 KVGVYNNKGDGPFSQI 791


>gi|16923964|ref|NP_476459.1| contactin-1 precursor [Rattus norvegicus]
 gi|17432928|sp|Q63198.2|CNTN1_RAT RecName: Full=Contactin-1; AltName: Full=Neural cell surface
           protein F3; Flags: Precursor
 gi|1498194|dbj|BAA07504.1| F3 [Rattus norvegicus]
 gi|149017608|gb|EDL76612.1| contactin 1 [Rattus norvegicus]
          Length = 1021

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 270/811 (33%), Positives = 414/811 (51%), Gaps = 44/811 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S+   ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    +D L++ R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDVD-LTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEDRPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 TMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTSGAVLKIFNIQLEDEGLYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N   T Y++A+L++L L P+F+
Sbjct: 373 KGELRLYD------------VTFENA----GMYQCIAENAYGTIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C A N  G   S G L++ + P+     P    I    N  ++C+A  +  LD
Sbjct: 477 NDGGIYTCFAENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPSLD 535

Query: 711 VAYIWTHNGVRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKIS 767
           + ++W+ NG  I  N ++  +    N  +D  G L I NA    AG Y C  ++ V   S
Sbjct: 536 LTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSS 595

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
               ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +  
Sbjct: 596 ASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK 655

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
                 +     G  E++    L+PW  YEF+V+A N LG GEPS PS +  T    P  
Sbjct: 656 -----TDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNV 710

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
           APS +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  
Sbjct: 711 APSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRY 769

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V +  +    T ++VKV+A N+ G GP S +
Sbjct: 770 VHKDETMTPSTAFQVKVKAFNNKGDGPYSLI 800



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 138/599 (23%), Positives = 227/599 (37%), Gaps = 80/599 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENA 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLN 530
              + ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L 
Sbjct: 397 YGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           + +  L  +D     +N+          D  +Y C A+N      S+  L V+T      
Sbjct: 457 NSSRILIWEDGSLEINNIT-------RNDGGIYTCFAENNRGKANSTGTL-VITNPTRII 508

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGG-------RRKIF--E 639
             P+ ++   GE  N T+ C     P     FVW  +G +I           +R      
Sbjct: 509 LAPINADITVGE--NATMQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDA 566

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
           NG LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L
Sbjct: 567 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVAL 624

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
             S  ++    ++  +T     I + D  + +T    I+G +            EYE   
Sbjct: 625 TWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRV 683

Query: 758 VVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
           V  +T+G         +I T        P  + GG           TI W        P+
Sbjct: 684 VATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGT----NRELTITWA-------PL 732

Query: 809 T---HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ K
Sbjct: 733 SREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MTPSTAFQVK 785

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V A N  G G P S     N+  D P +AP+ +G       ++S+ W+ +  +   +  I
Sbjct: 786 VKAFNNKGDG-PYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVESYQI 844

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            Y     K+        T +EY        R+ +    T+Y ++V A N  G GP S+V
Sbjct: 845 RYWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPSSDV 897


>gi|28373119|ref|NP_778203.1| contactin-1 isoform 2 precursor [Homo sapiens]
 gi|397510802|ref|XP_003825776.1| PREDICTED: contactin-1 isoform 2 [Pan paniscus]
 gi|469045|gb|AAA67921.1| h-contactin 2 precursor [Homo sapiens]
 gi|119578228|gb|EAW57824.1| contactin 1, isoform CRA_b [Homo sapiens]
          Length = 1007

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 268/795 (33%), Positives = 403/795 (50%), Gaps = 41/795 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S+   ++L+C A   P P Y+W        R+    +D  SD
Sbjct: 29  GPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD 78

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 79  -RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 138 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R   +    I 
Sbjct: 256 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 316 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------ 369

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 370 ------VTFENA----GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D GIY+C A N  
Sbjct: 420 RVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNR 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L++   P+     P    I    N  ++C+A  +  LD+ ++W+ NG  I  
Sbjct: 480 GKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDF 538

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 539 NKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 598

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 599 LRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 653

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG+  +L+
Sbjct: 654 AARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELT 713

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 714 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVK 772

Query: 964 VQAINDVGPGPESEV 978
           V+A N+ G GP S V
Sbjct: 773 VKAFNNKGDGPYSLV 787



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 232/597 (38%), Gaps = 78/597 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 334 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 385

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 386 YGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 445

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 446 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITDPTRI 496

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 497 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 556

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 557 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 614

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 615 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 673

Query: 761 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD-GATNGR---------PIT- 809
           +T+G+          G P +P     ++    +  +  +D G   GR         P++ 
Sbjct: 674 NTLGR----------GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSR 721

Query: 810 --HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV 
Sbjct: 722 EYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVK 774

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N  G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y
Sbjct: 775 AFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRY 833

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                K+        T +EY        R+ +    T+Y ++V A N  G GP S++
Sbjct: 834 WAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSDM 884


>gi|219518168|gb|AAI44187.1| Contactin 5 [Homo sapiens]
          Length = 1100

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/801 (32%), Positives = 388/801 (48%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P D++F     S    + L+C   G P PSY W +            I
Sbjct: 93  ESVDYGPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEI 142

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-R 302
           D  SD R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R
Sbjct: 143 DLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTR 202

Query: 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
           +     +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  
Sbjct: 203 SAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 262

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP T   A   G  V++
Sbjct: 263 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKM 320

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R     
Sbjct: 321 ECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSREKNSF 380

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q
Sbjct: 381 RGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQ 433

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
            R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+    
Sbjct: 434 SRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTII 492

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             +   V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C 
Sbjct: 493 VTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCR 552

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
             NV G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G
Sbjct: 553 GENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKG 611

Query: 720 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I    +    E+         L I N     AG Y C V++T   +S +  ++V GPP
Sbjct: 612 QPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPP 671

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DR 837
           G PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V + 
Sbjct: 672 GPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEI 725

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G
Sbjct: 726 ITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSG 785

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           +  +L I+WEP+  E QN     Y + +R  N T    E +         + R  S    
Sbjct: 786 RRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPL 844

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           T +EVKV   N+ G GP S++
Sbjct: 845 TPFEVKVGVYNNKGDGPFSQI 865


>gi|134054436|emb|CAM73212.1| zgc:55318 [Danio rerio]
          Length = 937

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 264/806 (32%), Positives = 387/806 (48%), Gaps = 56/806 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P D +F L        I ++C A G P P+Y W         +    +D  +D
Sbjct: 56  GPVFIQEPDDAIFSLDSDD--KKIIMNCEARGNPVPTYSWL--------INGTNVDTEAD 105

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  GNLII++  +V D G Y C+A N  G ++S    L F ++G F+ K R     
Sbjct: 106 FRYSLIDGNLIIHNASEVIDYGRYQCRAENSIGIVLSRDALLQFAYLGPFSGKTRGAVSV 165

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP++ P + Y W  +  P+FV ED R F+S + G LY   ++  D G+Y
Sbjct: 166 REGQGVVLMCAPPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSY 225

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP+T   A   G  VRLEC A 
Sbjct: 226 VCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAA--KGVTVRLECFAL 283

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P+ A       +L IPN+++ED G Y C+A N R        + 
Sbjct: 284 GNPVPTITWRKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYECKAENTRGGTAFRGHLQ 343

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P +   + D  +D+   L W C A G P  TY W RNGE       PL  Q R  +
Sbjct: 344 VYTLPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLRNGE-------PLSTQSRVEM 396

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            +  LTI  L  + D  MYQC A+N+    YSSA+L++L   P F   P+     A  G 
Sbjct: 397 VNGELTIHRLQ-QADSGMYQCIAENKYGAIYSSAELKILASAPMFNNNPV--RLIATVGK 453

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           +V++ C P A+PKP+  W+K+   +    R  +  N  L I   SR D G Y C A N  
Sbjct: 454 DVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAENQF 513

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G  E    L+V   P   E  P ++ +    ++ L C    +  LDV+++W  N     N
Sbjct: 514 GSAELTTVLLVKE-PMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN-----N 567

Query: 725 MDLNELETPNINIDGGLLEI--TNASFAD----------AGEYECVVKSTVGKISTKTTV 772
             LN  +      DGG  E   T +S AD          AG+Y C  +++   +  +  +
Sbjct: 568 QPLNTQQ------DGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEAEL 621

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
           +V GPPG PG V V E+  ++AT+ W+ G  N  PIT Y + AR+  +  W       + 
Sbjct: 622 LVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QTVK 676

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
            + D  TG  E+++   L PW  YEF+V+A N +G G+PS PS    T    P  AP+ +
Sbjct: 677 TDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPANV 736

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
            GG G+  +L ISWEP+  E QN     Y + +R  N T    E +    +      R  
Sbjct: 737 RGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFR-VNGTRGWKEKMVTSADSTTYKYRDE 795

Query: 953 SEFYYTEYEVKVQAINDVGPGPESEV 978
           +    T +EV+V   N+ G GP SEV
Sbjct: 796 TFPPLTPFEVRVGVYNNKGDGPFSEV 821


>gi|355566984|gb|EHH23363.1| hypothetical protein EGK_06815, partial [Macaca mulatta]
          Length = 1084

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/796 (32%), Positives = 386/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C   G P PSY W +            ID  SD
Sbjct: 82  GPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEIDLESD 131

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R+    
Sbjct: 132 YRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSAVSV 191

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 192 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 251

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 252 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 309

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  +       +L IPNV+++D G Y CRA N R        + 
Sbjct: 310 GNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 369

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 370 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSSQSRVEM 422

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +  
Sbjct: 423 VNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQ 481

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 482 EVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVF 541

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 542 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 600

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 601 EEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 660

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 661 VIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEIITGDM 714

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L
Sbjct: 715 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHEL 774

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EV
Sbjct: 775 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 833

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 834 KVGVYNNKGDGPFSQI 849


>gi|114645304|ref|XP_001168046.1| PREDICTED: contactin-1 isoform 3 [Pan troglodytes]
          Length = 1007

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 268/795 (33%), Positives = 403/795 (50%), Gaps = 41/795 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S+   ++L+C A   P P Y+W        R+    +D  SD
Sbjct: 29  GPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD 78

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 79  -RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 138 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R   +    I 
Sbjct: 256 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 316 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------ 369

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 370 ------VTFENA----GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D GIY+C A N  
Sbjct: 420 RVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNR 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L++   P+     P    I    N  ++C+A  +  LD+ ++W+ NG  I  
Sbjct: 480 GKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDF 538

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 539 NKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 598

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 599 LRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 653

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG+  +L+
Sbjct: 654 AARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELT 713

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 714 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVK 772

Query: 964 VQAINDVGPGPESEV 978
           V+A N+ G GP S V
Sbjct: 773 VKAFNNKGDGPYSLV 787



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 232/597 (38%), Gaps = 78/597 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 334 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 385

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 386 YGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 445

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 446 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITDPTRI 496

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 497 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 556

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 557 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 614

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 615 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 673

Query: 761 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD-GATNGR---------PIT- 809
           +T+G+          G P +P     ++    +  +  +D G   GR         P++ 
Sbjct: 674 NTLGR----------GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSR 721

Query: 810 --HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV 
Sbjct: 722 EYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MSPSTAFQVKVK 774

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N  G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y
Sbjct: 775 AFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGAKVLSSSEISVHWEHVLEKIVESYQIRY 833

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                K+        T +EY        R+ +    T+Y ++V A N  G GP S++
Sbjct: 834 WAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSDM 884


>gi|7657359|ref|NP_055176.1| contactin-5 isoform 1 precursor [Homo sapiens]
 gi|343168755|ref|NP_001230199.1| contactin-5 isoform 1 precursor [Homo sapiens]
 gi|55976223|sp|O94779.2|CNTN5_HUMAN RecName: Full=Contactin-5; AltName: Full=Neural recognition
           molecule NB-2; Short=hNB-2; Flags: Precursor
 gi|5672487|dbj|BAA36579.2| hNB-2 [Homo sapiens]
 gi|119587396|gb|EAW66992.1| contactin 5, isoform CRA_a [Homo sapiens]
          Length = 1100

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/801 (32%), Positives = 387/801 (48%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P D++F     S    + L+C   G P PSY W +            I
Sbjct: 93  ESVDYGPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEI 142

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D  SD R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ +  
Sbjct: 143 DLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTR 202

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  
Sbjct: 203 SAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 262

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP T   A   G  V++
Sbjct: 263 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKM 320

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R     
Sbjct: 321 ECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSF 380

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q
Sbjct: 381 RGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQ 433

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
            R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+    
Sbjct: 434 SRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTII 492

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             +   V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C 
Sbjct: 493 VTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCR 552

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
             NV G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G
Sbjct: 553 GENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKG 611

Query: 720 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I    +    E+         L I N     AG Y C V++T   +S +  ++V GPP
Sbjct: 612 QPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPP 671

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DR 837
           G PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V + 
Sbjct: 672 GPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEI 725

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G
Sbjct: 726 ITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSG 785

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           +  +L I+WEP+  E QN     Y + +R  N T    E +         + R  S    
Sbjct: 786 RRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPL 844

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           T +EVKV   N+ G GP S++
Sbjct: 845 TPFEVKVGVYNNKGDGPFSQI 865


>gi|120659964|gb|AAI30620.1| CNTN5 protein [Homo sapiens]
          Length = 1100

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/801 (32%), Positives = 387/801 (48%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P D++F     S    + L+C   G P PSY W +            I
Sbjct: 93  ESVDYGPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEI 142

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D  SD R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ +  
Sbjct: 143 DLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTR 202

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  
Sbjct: 203 SAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 262

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP T   A   G  V++
Sbjct: 263 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKM 320

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R     
Sbjct: 321 ECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSF 380

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q
Sbjct: 381 RGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQ 433

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
            R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+    
Sbjct: 434 SRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTII 492

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             +   V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C 
Sbjct: 493 VTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCR 552

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
             NV G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G
Sbjct: 553 GENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKG 611

Query: 720 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I    +    E+         L I N     AG Y C V++T   +S +  ++V GPP
Sbjct: 612 QPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPP 671

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DR 837
           G PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V + 
Sbjct: 672 GPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEI 725

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G
Sbjct: 726 ITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSG 785

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           +  +L I+WEP+  E QN     Y + +R  N T    E +         + R  S    
Sbjct: 786 RRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPL 844

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           T +EVKV   N+ G GP S++
Sbjct: 845 TPFEVKVGVYNNKGDGPFSQI 865


>gi|395824571|ref|XP_003785536.1| PREDICTED: contactin-6 [Otolemur garnettii]
          Length = 1029

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 264/805 (32%), Positives = 395/805 (49%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D++   P F ++P DV+F  DLSK    ++I L+C A GYP+P Y W +           
Sbjct: 20  DRLLSRPVFTQEPEDVIFPLDLSK----SEIILNCAANGYPSPHYRWKQN--------GT 67

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L+I+ P   +D G+Y C A+N  G+++S   +L F +I +F  K
Sbjct: 68  DIDFSMSYHYRLDGGSLVISSPHTDQDIGTYQCLATNLLGTVLSRKAKLQFAYIDDFETK 127

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P  V+ED R FVS + G LY + +E
Sbjct: 128 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLHVQEDNRRFVSQETGNLYIAKVE 187

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 188 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRADGVMGEYEPKIEVRFPETIQAAKDSSV 245

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C A N R  
Sbjct: 246 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGR 305

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++     L W C+A G P+  Y WF+NGE LN E    
Sbjct: 306 NLAKGQLIFYAPPEWEQKIQNTYLSIYDSLLWECKASGKPNPWYMWFKNGERLNPE---- 361

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 362 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKTPIKK 417

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
            +    GGN+ I C P A P+    WK+    +    R  + E+G+L I  V+R D G Y
Sbjct: 418 NSVVQVGGNIVIECKPNAFPRAAISWKRGAENLRQSRRVFLLEDGSLKIYNVTRSDGGSY 477

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G+ ++ G LIV    +     P ++ +    ++ L C    +  ++V ++W+
Sbjct: 478 TCIATNQFGIAKNTGSLIVKER-TVITVPPSRMDVTVGESIVLPCQVSHDPTIEVIFVWS 536

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 537 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADII 593

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  V+V  +  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 594 VRGPPGPPEDVKVDHISSTTSQLSWRPGPNNNSPIQIFTIQTRTPFSVGW-----QAVAT 648

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +  +G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 649 VPEILSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIN 708

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y + +R    T +  E +    +    V R  S
Sbjct: 709 GGGGSRSELVITWESIPEELQNGEGFGYVVMFRPVGSTTWNKEKVASVESSRF-VYRNES 767

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 768 IIPLSPFEVKVGVYNNEGEGALSTV 792



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 178/771 (23%), Positives = 283/771 (36%), Gaps = 91/771 (11%)

Query: 248 DKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISES-----VQLAFGFIGEFNLK 301
           ++RF +   GNL I    +  D G+Y C  +NK      +      VQ A G +GE+  K
Sbjct: 170 NRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKEAQRSVQGPPTPLVQRADGVMGEYEPK 228

Query: 302 ---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYWAR---DYFPNFVEEDKRVFVSYDGAL 353
              R PE     ++    + C    N P  +  W R      P  V+  K         L
Sbjct: 229 IEVRFPETIQAAKDSSVKLECFALGN-PVPDISWRRLDGSPLPGKVKYSKS-----QAIL 282

Query: 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413
                +Q D G Y C   +     GRN     L  +    ++Q K  N +   +      
Sbjct: 283 EIPNFQQEDEGFYECIAGNL---RGRNLAKGQLIFYAPPEWEQ-KIQNTYLSIY------ 332

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
            D +  EC A G P P Y W + G  L      +  N  L I  + V D G Y C A N 
Sbjct: 333 -DSLLWECKASGKPNPWYMWFKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENK 391

Query: 474 RSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLN 530
              + ++  + + A  P+F+     K+   Q   ++   C+    P    SW R  E L 
Sbjct: 392 YQIIYANAELRVLASAPDFSKTPIKKNSVVQVGGNIVIECKPNAFPRAAISWKRGAENLR 451

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
                 + +  + ++D  L I Y     D   Y C A NQ     ++  L ++  +    
Sbjct: 452 ------QSRRVFLLEDGSLKI-YNVTRSDGGSYTCIATNQFGIAKNTGSL-IVKERTVIT 503

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GN 642
             P   +   GE  ++ + C     P  +  FVW  +G++I        FE       G+
Sbjct: 504 VPPSRMDVTVGE--SIVLPCQVSHDPTIEVIFVWSFNGDVIDLKKGVAHFERIGGESVGD 561

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L+I  +  + SG Y CT         +   +IV   P   E +      +    L  R  
Sbjct: 562 LMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVKVDHISSTTSQLSWRPG 621

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
            +    + +  I T     +G   +  +  P I + G     T    +   EYE   V  
Sbjct: 622 PNNNSPIQIFTIQTRTPFSVGWQAVATV--PEI-LSGKTYNATVVGLSPWVEYEFRVVAG 678

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP- 807
           +++G          + TK +V V  P  + GG       ++   I W    +   NG   
Sbjct: 679 NSIGIGEPSKPSELLRTKASVPVVAPVNINGGGG----SRSELVITWESIPEELQNGEGF 734

Query: 808 --ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
             +  ++ +  T WN       E V   E  R+  R E+     ++P S +E KV   N 
Sbjct: 735 GYVVMFRPVGSTTWNK------EKVASVESSRFVYRNES-----IIPLSPFEVKVGVYNN 783

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
            G G  S+ S  Y+   D+P  AP +I        ++ +SW  +   +     + Y++ +
Sbjct: 784 EGEGALSTVSIVYSG-EDEPQLAPRKISVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLY 842

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
              +  E     ++  GNV      I      T Y   V+A N  G GP S
Sbjct: 843 WTDDARESMIGKIRVSGNV--TTKNITGLKANTIYFASVRAYNTAGTGPSS 891


>gi|41054217|ref|NP_956098.1| contactin-5 [Danio rerio]
 gi|55976499|sp|Q7ZW34.1|CNTN5_DANRE RecName: Full=Contactin-5; Flags: Precursor
 gi|28279510|gb|AAH45307.1| Zgc:55318 [Danio rerio]
          Length = 1056

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 264/806 (32%), Positives = 387/806 (48%), Gaps = 56/806 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P D +F L        I ++C A G P P+Y W         +    +D  +D
Sbjct: 56  GPVFIQEPDDAIFSLDSDD--KKIIMNCEARGNPVPTYSWL--------INGTNVDTEAD 105

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  GNLII++  +V D G Y C+A N  G ++S    L F ++G F+ K R     
Sbjct: 106 FRYSLIDGNLIIHNASEVIDYGRYQCRAENSIGIVLSRDALLQFAYLGPFSGKTRGAVSV 165

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP++ P + Y W  +  P+FV ED R F+S + G LY   ++  D G+Y
Sbjct: 166 REGQGVVLMCAPPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSY 225

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP+T   A   G  VRLEC A 
Sbjct: 226 VCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAA--KGVTVRLECFAL 283

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P+ A       +L IPN+++ED G Y C+A N R        + 
Sbjct: 284 GNPVPTITWRKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYECKAENTRGGTAFRGHLQ 343

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P +   + D  +D+   L W C A G P  TY W RNGE       PL  Q R  +
Sbjct: 344 VYTLPQWISMINDTQLDSGEQLRWECRATGKPRPTYRWLRNGE-------PLSTQSRVEM 396

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            +  LTI  L  + D  MYQC A+N+    YSSA+L++L   P F   P+     A  G 
Sbjct: 397 VNGELTIHRLQ-QADSGMYQCIAENKYGAIYSSAELKILASAPMFNNNPV--RLIATVGK 453

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           +V++ C P A+PKP+  W+K+   +    R  +  N  L I   SR D G Y C A N  
Sbjct: 454 DVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAENQF 513

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G  E    L+V   P   E  P ++ +    ++ L C    +  LDV+++W  N     N
Sbjct: 514 GSAELTTVLLVKE-PMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN-----N 567

Query: 725 MDLNELETPNINIDGGLLEI--TNASFAD----------AGEYECVVKSTVGKISTKTTV 772
             LN  +      DGG  E   T +S AD          AG+Y C  +++   +  +  +
Sbjct: 568 QPLNTQQ------DGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEAEL 621

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
           +V GPPG PG V V E+  ++AT+ W+ G  N  PIT Y + AR+  +  W       + 
Sbjct: 622 LVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QTVK 676

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
            + D  TG  E+++   L PW  YEF+V+A N +G G+PS PS    T    P  AP+ +
Sbjct: 677 TDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPANV 736

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
            GG G+  +L ISWEP+  E QN     Y + +R  N T    E +    +      R  
Sbjct: 737 RGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFR-VNGTRGWKEKMVTSADSTTYKYRDE 795

Query: 953 SEFYYTEYEVKVQAINDVGPGPESEV 978
           +    T +EV+V   N+ G GP SEV
Sbjct: 796 TFPPLTPFEVRVGVYNNKGDGPFSEV 821



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 154/647 (23%), Positives = 237/647 (36%), Gaps = 81/647 (12%)

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC 421
           D+G+Y C  ++      R G  F        + Q    P            +G+++R EC
Sbjct: 321 DSGSYECKAENT-----RGGTAF------RGHLQVYTLPQWISMINDTQLDSGEQLRWEC 369

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
            A G P P+Y W R G PL   +  E  N  LTI  ++  D G Y C A N   A+ SS 
Sbjct: 370 RATGKPRPTYRWLRNGEPLSTQSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSA 429

Query: 482 TISIQAE-PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
            + I A  P F             D++  C     P    SW +N   L         + 
Sbjct: 430 ELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRLQP------SRR 483

Query: 541 RYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLR-VLTLKPSFKKR--PLES 596
              +++N  T+R +N  R D   Y CRA+NQ    + SA+L  VL +K   +    PL  
Sbjct: 484 IMLLRNN--TLRIINSSRSDEGSYVCRAENQ----FGSAELTTVLLVKEPMRVELSPLRV 537

Query: 597 ETYAGEGGNVTIFCNPEAAPK--PKFVWKKDG---NIIGSGGRRKIFEN----GNLLISP 647
           E   GE  +V + C     P     F+W  +    N    GG  +  +      +L+I  
Sbjct: 538 EVTVGE--SVVLSCKVTHDPSLDVSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRS 595

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
           +    +G Y C A        ++  L+V   P      PP + I           + +  
Sbjct: 596 ILLKHAGKYGCRAQTSTDSVLAEAELLVRGPPG-----PPGVVIVEEITASTATLSWSHG 650

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG-----EYECVVKST 762
           + + + I T+N      + L   +T   + D     + +A   D       E+  V  ++
Sbjct: 651 VDNHSPITTYNVQARSPVSLG-WQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNS 709

Query: 763 VG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW---TDGATNGRPITH 810
           +G          + TK  V    P  + GG       +    I W   ++   NG     
Sbjct: 710 IGTGDPSPPSRAVRTKEAVPSVAPANVRGG----NGRRHELVISWEPVSEEYQNGEGF-G 764

Query: 811 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
           Y +  R N    W    + V   +   Y  R E        P + +E +V   N  G G 
Sbjct: 765 YIVAFRVNGTRGWKE--KMVTSADSTTYKYRDE-----TFPPLTPFEVRVGVYNNKGDG- 816

Query: 871 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930
           P S      +   +P + PS +        ++ + W+P P      P  Y   FW+   D
Sbjct: 817 PFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWKP-PSPGLGRPQGYEVSFWK---D 872

Query: 931 TEFQSETLKEYGNVGIAVVRIPSEF-YYTEYEVKVQAINDVGPGPES 976
            E Q E  K+   +G     + S     T+Y V V+  N  G GP S
Sbjct: 873 VE-QEELGKKKRTLGNETNMLLSGLDGNTQYLVSVKGFNSAGQGPSS 918


>gi|410964133|ref|XP_003988610.1| PREDICTED: contactin-1 isoform 1 [Felis catus]
          Length = 1018

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 277/833 (33%), Positives = 416/833 (49%), Gaps = 43/833 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I      L++   Y+ YG  +   DK   GP F +QP + ++   + S 
Sbjct: 1   MKMWLLVSHLVIISFTTCLSEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESP 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    ID  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDIDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPLPERTTK--PYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N+R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   + G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ +IW+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           I NA    AG Y C  ++ V   S    ++V GPPG PGG+++ ++  TS  + W+ G+ 
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSD 629

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           N  PI+ Y I  +T  +  W +        +     G  EA+    L+PW  YEF+V+A 
Sbjct: 630 NHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N LG GEPS PS +  T    P  APS +GGGGG   +L+I+W PL RE     N  Y +
Sbjct: 685 NTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIV 744

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            ++  +  E++  T+    + G  V +  +    T ++VKV+A N+ G GP S
Sbjct: 745 AFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYS 796



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 132/594 (22%), Positives = 233/594 (39%), Gaps = 72/594 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLN 530
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L 
Sbjct: 397 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           + +  L  +D     +N+          D  +Y C A+N  + R ++    V+T      
Sbjct: 457 NSSRILIWEDGSLEINNIT-------RNDGGIYTCFAENN-RGRANNTGTLVITDPTRII 508

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGNL 643
             P+ ++   GE   +    + + A    F+W  +G +I        ++       NG L
Sbjct: 509 LAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGEL 568

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S 
Sbjct: 569 LIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWSR 626

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            ++    ++  +T     I + D  + +T    I+G +            EYE  V    
Sbjct: 627 GSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRV---- 681

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPIT----------H 810
             ++T T  I  G P +P     ++    +  +  +D   G  + R +T          H
Sbjct: 682 --VATNTLGI--GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYH 735

Query: 811 YK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           Y      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A N
Sbjct: 736 YGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKAFN 788

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
             G G P S +   N+  D P +AP+ +G       ++S+ W+ +  +   +  I Y   
Sbjct: 789 NKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWDHVVEKIVESYQIRYWAA 847

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             K+        T +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 848 HDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 895


>gi|332231546|ref|XP_003264956.1| PREDICTED: contactin-3 [Nomascus leucogenys]
          Length = 1028

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/797 (32%), Positives = 398/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDMSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSAVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W ++G  L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKDGAALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P A+P+ +  WKK    +    R  + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLKDGGLKIANVTKADAGTYTCMAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKASGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               + +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKEGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 153/652 (23%), Positives = 240/652 (36%), Gaps = 66/652 (10%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FSGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDSLYWECRASGKPKPSYRWLKDGAALVLEERIQIENGALTISNLSVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-KK 445

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   ++D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 446 GDV------SVQEHERISLLKDGGLKIANVT-KADAGTYTCMAENQFGKASGTTHL-VVT 497

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFE--- 639
                   P   +   GE  +V + C  +  P     F W  +G +         FE   
Sbjct: 498 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKEGSHFEKVG 555

Query: 640 ---NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
              +G+L+I  +    SG Y C          S   LIV   P   E +           
Sbjct: 556 GSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQ 615

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
           L  +        +    I       +G   +  +  P + IDG     T        EYE
Sbjct: 616 LSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVEYE 672

Query: 757 --CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGA 802
              V  + +G         K+ T+  V    P  + GG       ++   I W    +  
Sbjct: 673 FRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPEEL 728

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE KV  
Sbjct: 729 QNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKVGV 780

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   + Y+
Sbjct: 781 YNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYE 839

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
           + +      E  S  +K  GN   A  R+        Y   V+A N  G GP
Sbjct: 840 VRYWNGGGKEESSSKVKVAGNETSA--RLQGLKSNLAYYTAVRAYNSAGSGP 889


>gi|301778243|ref|XP_002924539.1| PREDICTED: contactin-1-like [Ailuropoda melanoleuca]
          Length = 1121

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 272/807 (33%), Positives = 407/807 (50%), Gaps = 42/807 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S    ++L+C A   P P Y+W      
Sbjct: 130 RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW------ 180

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    ID  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 181 --RMNNGDIDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 237

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 238 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 297

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 298 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDIY 355

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 356 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEA 415

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N+R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 416 ENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYH 475

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 476 KGELRLYD------------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFE 519

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R
Sbjct: 520 MNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITR 579

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C A N  G   + G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 580 NDGGIYTCFAENNRGRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 638

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + +IW+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 639 LTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSAS 698

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
             ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +    
Sbjct: 699 ADLVVRGPPGPPGGLRIEDIRATSVALSWSRGSDNHSPISKYTIQTKTILSDDWKDAK-- 756

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
               +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  AP
Sbjct: 757 ---TDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAP 813

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           S +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V 
Sbjct: 814 SDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVH 872

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  +    T ++VKV+A N+ G GP S
Sbjct: 873 KDETMRPSTAFQVKVKAFNNKGDGPYS 899



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 231/596 (38%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 448 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 499

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 500 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 559

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N  + R ++    V+T     
Sbjct: 560 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENN-RGRANNTGTLVITDPTRI 610

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    F+W  +G +I        ++       NG 
Sbjct: 611 ILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGE 670

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 671 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALSWS 728

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 729 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 787

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 788 NTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWV-------PLSRE 836

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 837 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDE-----TMRPSTAFQVKVKA 889

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   N+  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 890 FNNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVVEKIVESYQIRYW 948

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+        T +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 949 AAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 998


>gi|1095168|prf||2107324A neural adhesion molecule F3
          Length = 1021

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 270/811 (33%), Positives = 414/811 (51%), Gaps = 44/811 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S+   ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESLDGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    +D L++ R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDVD-LTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEDRPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 TMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTSGAVLKIFNIQLEDEGLYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N   T Y++A+L++L L P+F+
Sbjct: 373 KGELRLYD------------VTFENA----GMYQCIAENAYGTIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C A N  G   S G L++ + P+     P    I    N  ++C+A  +  LD
Sbjct: 477 NDGGIYTCFAENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPSLD 535

Query: 711 VAYIWTHNGVRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKIS 767
           + ++W+ NG  I  N ++  +    N  +D  G L I NA    AG Y C  ++ V   S
Sbjct: 536 LTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSS 595

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
               ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +  
Sbjct: 596 ASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK 655

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
                 +     G  E++    L+PW  YEF+V+A N LG GEPS PS +  T    P  
Sbjct: 656 -----TDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNV 710

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
           APS +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  
Sbjct: 711 APSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRY 769

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V +  +    T ++VKV+A N+ G GP S +
Sbjct: 770 VHKDETMTPSTAFQVKVKAFNNKGDGPYSLI 800



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 138/599 (23%), Positives = 227/599 (37%), Gaps = 80/599 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENA 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLN 530
              + ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L 
Sbjct: 397 YGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 456

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           + +  L  +D     +N+          D  +Y C A+N      S+  L V+T      
Sbjct: 457 NSSRILIWEDGSLEINNIT-------RNDGGIYTCFAENNRGKANSTGTL-VITNPTRII 508

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGG-------RRKIF--E 639
             P+ ++   GE  N T+ C     P     FVW  +G +I           +R      
Sbjct: 509 LAPINADITVGE--NATMQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDA 566

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
           NG LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L
Sbjct: 567 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVAL 624

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--C 757
             S  ++    ++  +T     I + D  + +T    I+G +            EYE   
Sbjct: 625 TWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRV 683

Query: 758 VVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
           V  +T+G         +I T        P  + GG           TI W        P+
Sbjct: 684 VATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGT----NRELTITWA-------PL 732

Query: 809 T---HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ K
Sbjct: 733 SREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MTPSTAFQVK 785

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V A N  G G P S     N+  D P +AP+ +G       ++S+ W+ +  +   +  I
Sbjct: 786 VKAFNNKGDG-PYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVESYQI 844

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            Y     K+        T +EY        R+ +    T+Y ++V A N  G GP S+V
Sbjct: 845 RYWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPSSDV 897


>gi|426249271|ref|XP_004018373.1| PREDICTED: contactin-3 [Ovis aries]
          Length = 1028

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 262/797 (32%), Positives = 392/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDLSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L  GNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EYRYKLIRGNLVVMNPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSAVTNDRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGLPFSSKVKLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNGEALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLN-VTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P+    WKK   I+    R     +G L I  V++ D+GIY+C A N
Sbjct: 424 GSEVNLDCKPRASPRALSSWKKGEVIVQESERTSFLNDGGLKIVNVTKADAGIYTCIAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       LIV   P+     P  + ++   ++ L C    + LLD  + W  NG   
Sbjct: 484 QFGKANGTTHLIVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDTIFTWYFNGALT 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+
Sbjct: 602 ESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESILPFSLYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 163/661 (24%), Positives = 252/661 (38%), Gaps = 84/661 (12%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q D+G+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FSGVLEIPNFQQEDSGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEL----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDSLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q  +++   C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KK 445

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           GE++  E+     +   F+ D  L I  +  + D  +Y C A+NQ      +  L ++T 
Sbjct: 446 GEVIVQES-----ERTSFLNDGGLKIVNVT-KADAGIYTCIAENQFGKANGTTHL-IVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 499 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDTIFTWYFNGALTDFKKDGSHFEKVGG 556

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +  K+     
Sbjct: 557 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESV--KVDEITD 611

Query: 695 RNLQLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 752
              QL     T+    V AY +       +G      +  P + IDG     T       
Sbjct: 612 TTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--PEV-IDGKTHTATVVELNPW 668

Query: 753 GEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT-- 799
            EYE   V  + +G         K+ T+  V    P  + GG       ++   I W   
Sbjct: 669 VEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPV 724

Query: 800 -DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
            +   NG     +  ++ +  TNW      +   V   +  RY  R E+     ++P+S 
Sbjct: 725 PEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES-----ILPFSL 773

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           YE KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N
Sbjct: 774 YEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAIPWKLSN 832

Query: 916 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPG 973
              + Y++ +      E  S  LK  GNV  A +R + S   YYT     V+A N  G G
Sbjct: 833 GHLLGYEVRYWNNGGEEESSSKLKVAGNVTSARLRGLKSNLAYYT----AVRAFNSAGTG 888

Query: 974 P 974
           P
Sbjct: 889 P 889


>gi|332207987|ref|XP_003253076.1| PREDICTED: contactin-5 isoform 1 [Nomascus leucogenys]
 gi|332207989|ref|XP_003253077.1| PREDICTED: contactin-5 isoform 2 [Nomascus leucogenys]
          Length = 1100

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/801 (32%), Positives = 387/801 (48%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P D++F     S    + L+C   G P PSY W +            I
Sbjct: 93  ESVDYGPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPIPSYRWLRN--------GTEI 142

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D  SD R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ +  
Sbjct: 143 DLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTR 202

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  
Sbjct: 203 SAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 262

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP T   A   G  V++
Sbjct: 263 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKV 320

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R     
Sbjct: 321 ECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSF 380

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q
Sbjct: 381 RGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQ 433

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
            R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+    
Sbjct: 434 SRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTII 492

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             +   V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C 
Sbjct: 493 VTKDREVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCR 552

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
             NV G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G
Sbjct: 553 GENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKG 611

Query: 720 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I    +    E+         L I N     AG Y C V++T   +S +  ++V GPP
Sbjct: 612 QPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPP 671

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DR 837
           G PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V + 
Sbjct: 672 GPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEI 725

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G
Sbjct: 726 ITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSG 785

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           +  +L I+WEP+  E QN     Y + +R  N T    E +         + R  S    
Sbjct: 786 RRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPL 844

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           T +EVKV   N+ G GP S++
Sbjct: 845 TPFEVKVGVYNNKGDGPFSQI 865


>gi|219520630|gb|AAI44186.1| CNTN5 protein [Homo sapiens]
          Length = 1100

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/801 (32%), Positives = 388/801 (48%), Gaps = 34/801 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P D++F     S    + L+C   G P PSY W +            I
Sbjct: 93  ESVDYGPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPVPSYRWLRN--------GTEI 142

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-R 302
           D  SD R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R
Sbjct: 143 DLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTVGSILSREATLQFAYLGNFSGRTR 202

Query: 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
           +     +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  
Sbjct: 203 SAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 262

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP T   A   G  V++
Sbjct: 263 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKM 320

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R     
Sbjct: 321 ECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSF 380

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q
Sbjct: 381 RGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQ 433

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
            R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+    
Sbjct: 434 SRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTII 492

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             +   V I C P+ +PKP   WKK    +    R  +  +G+L I   S+ D G Y C 
Sbjct: 493 VTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAVLPDGSLRILNASKSDEGKYVCR 552

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
             NV G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G
Sbjct: 553 GENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKG 611

Query: 720 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I    +    E+         L I N     AG Y C V++T   +S +  ++V GPP
Sbjct: 612 QPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPP 671

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DR 837
           G PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V + 
Sbjct: 672 GPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEI 725

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G
Sbjct: 726 ITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSG 785

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           +  +L I+WEP+  E QN     Y + +R  N T    E +         + R  S    
Sbjct: 786 RRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPL 844

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           T +EVKV   N+ G GP S++
Sbjct: 845 TPFEVKVGVYNNKGDGPFSQI 865


>gi|426224671|ref|XP_004006492.1| PREDICTED: contactin-1 isoform 1 [Ovis aries]
 gi|426224673|ref|XP_004006493.1| PREDICTED: contactin-1 isoform 2 [Ovis aries]
          Length = 1018

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 271/807 (33%), Positives = 406/807 (50%), Gaps = 42/807 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S    ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    ID  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDIDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDVY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N+R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 373 RGELRLYD------------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF+W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D G+Y+C   N  G   S G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 477 SDGGVYTCFVENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + ++W+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 536 LTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSAS 595

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
             ++V GPPG PGG+++ +V  TS  + W+ G+ N  PI+ Y I  +T  +  W +    
Sbjct: 596 ADLVVRGPPGPPGGLRIEDVRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-- 653

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
               +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  AP
Sbjct: 654 ---TDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGMGEPSIPSNKIKTDGAAPNVAP 710

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           S +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V 
Sbjct: 711 SDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVH 769

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  +    T ++VKV+A N+ G GP S
Sbjct: 770 KDETMRPSTAFQVKVKAFNNKGDGPYS 796



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 134/596 (22%), Positives = 226/596 (37%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    R          L + +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGYSYHRGE--------LRLYDVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   + W +  E L+
Sbjct: 397 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C  +N  K + +S    V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVENN-KGKANSTGTLVITDPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 508 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 567

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 568 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDVRATSVALTWS 625

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 626 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 685 NTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSRE 733

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 734 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKA 786

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   ++  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 787 FNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHWEHVVEKIVESYQIRYW 845

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+          +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 846 ASHDKEAAAHRVQVASQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 895


>gi|426339218|ref|XP_004033555.1| PREDICTED: contactin-6 isoform 1 [Gorilla gorilla gorilla]
          Length = 1028

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 265/805 (32%), Positives = 395/805 (49%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    +++ L+C A  YP+P Y W +           
Sbjct: 20  DGLLSRPIFTQEPHDVIFPLDLSK----SEVILNCAANSYPSPHYRWKQN--------GT 67

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 68  DIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 127

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 128 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 187

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 188 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 245

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 246 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 305

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 306 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE---- 361

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 362 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 417

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
           +++   GG++ I C P A P+    WK+    +    R  + E+G+L I  ++R D+G Y
Sbjct: 418 KSFVQVGGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSY 477

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 478 TCIATNQFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 536

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 537 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADII 593

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 594 VRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVAT 648

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 649 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIH 708

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S
Sbjct: 709 GGGGSRSELVITWESIPEELQNGDGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNES 767

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 768 IIPLSPFEVKVGVYNNEGEGSLSTV 792



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 292/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 262 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 314 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 366 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 426 DIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 479 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 536 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 596 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 653 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELVITWESIPEELQNGDGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 766 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGTGPSS 891


>gi|73996774|ref|XP_534836.2| PREDICTED: contactin-1 isoform 1 [Canis lupus familiaris]
          Length = 1007

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 269/793 (33%), Positives = 402/793 (50%), Gaps = 41/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S    ++L+C A   P P Y+W        R+    ID  SD
Sbjct: 29  GPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW--------RMNNGDIDLTSD 78

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 79  -RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 138 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDIYALMGQNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N+R   +    I 
Sbjct: 256 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 316 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------ 369

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N   T Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 370 ------VTFENA----GMYQCIAENTHGTIYANAELKILALAPTFEMNPMKKKILAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D GIY+C A N  
Sbjct: 420 RVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNR 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   + G L++   P+     P    I    N  ++C+A  +  LD+ +IW+ NG  I  
Sbjct: 480 GRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDF 538

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 539 NKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 598

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 599 LRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 653

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 654 AARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELT 713

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 714 ITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVK 772

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 773 VKAFNNKGDGPYS 785



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 136/596 (22%), Positives = 230/596 (38%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 334 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 385

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
              + ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 386 HGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 445

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N  + R ++    V+T     
Sbjct: 446 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENN-RGRANNTGTLVITDPTRI 496

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    F+W  +G +I        ++       NG 
Sbjct: 497 ILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGE 556

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 557 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 614

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 615 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 673

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 674 NTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWV-------PLSRE 722

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 723 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKA 775

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   N+  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 776 FNNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVVEKIVESYQIRYW 834

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+        T +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 835 AAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 884


>gi|426339222|ref|XP_004033557.1| PREDICTED: contactin-6 isoform 3 [Gorilla gorilla gorilla]
          Length = 1019

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 265/805 (32%), Positives = 395/805 (49%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    +++ L+C A  YP+P Y W +           
Sbjct: 11  DGLLSRPIFTQEPHDVIFPLDLSK----SEVILNCAANSYPSPHYRWKQN--------GT 58

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 59  DIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 118

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 119 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 178

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 179 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 236

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 237 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 296

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 297 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE---- 352

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 353 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 408

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
           +++   GG++ I C P A P+    WK+    +    R  + E+G+L I  ++R D+G Y
Sbjct: 409 KSFVQVGGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSY 468

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 469 TCIATNQFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 527

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 528 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADII 584

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 585 VRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVAT 639

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 640 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIH 699

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S
Sbjct: 700 GGGGSRSELVITWESIPEELQNGDGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNES 758

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 759 IIPLSPFEVKVGVYNNEGEGSLSTV 783



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 292/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 145 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 193

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 194 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 252

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 253 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 304

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 305 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 356

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 357 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 416

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 417 DIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSYT 469

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 470 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 526

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 527 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 586

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 587 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 643

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 644 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGG 703

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 704 ----SRSELVITWESIPEELQNGDGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 756

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 757 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 810

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 811 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 868

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 869 SVRAYNTAGTGPSS 882


>gi|403269330|ref|XP_003926702.1| PREDICTED: contactin-1 isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1007

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 268/795 (33%), Positives = 403/795 (50%), Gaps = 41/795 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S+   ++L+C A   P P Y+W        R+    +D  SD
Sbjct: 29  GPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD 78

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 79  -RYSMVGGNLVINNPDKQKDAGIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERPEVRV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 138 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIYALMGQNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R   +    I 
Sbjct: 256 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 316 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------ 369

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 370 ------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D GIY+C A N  
Sbjct: 420 RVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNR 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L++   P+     P    I    N  ++C+A  +  LD+ ++W+ NG  I  
Sbjct: 480 GKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDF 538

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 539 NKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 598

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 599 LRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 653

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG+  +L+
Sbjct: 654 AARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNRELT 713

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 714 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVK 772

Query: 964 VQAINDVGPGPESEV 978
           V+A N+ G GP S V
Sbjct: 773 VKAFNNKGDGPYSLV 787



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 136/591 (23%), Positives = 226/591 (38%), Gaps = 68/591 (11%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 334 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 385

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 386 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 445

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 446 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITDPTRI 496

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 497 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 556

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 557 LLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 614

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 615 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 673

Query: 761 STVGK-----ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT---HYK 812
           +T+G+      S K       P   P  V          TI W        P++   HY 
Sbjct: 674 NTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNRELTITWA-------PLSREYHYG 726

Query: 813 -----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
                I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A N  
Sbjct: 727 NNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDE-----TMSPSTAFQVKVKAFNNK 779

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G G P S     N+  D P +AP+ +G       ++S+ WE +  +   +  I Y     
Sbjct: 780 GDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHD 838

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           ++        T +EY        R+ +    T+Y ++V A N  G GP S+
Sbjct: 839 REEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACNSAGCGPPSD 883


>gi|426249261|ref|XP_004018368.1| PREDICTED: contactin-6 isoform 1 [Ovis aries]
          Length = 1028

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 264/797 (33%), Positives = 394/797 (49%), Gaps = 42/797 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P F ++P D +F  DLSK    ++I L+C A GYP P Y W K++          ID   
Sbjct: 26  PIFTQEPQDAIFPLDLSK----SEIILNCAANGYPLPHYRW-KQNGAD-------IDFTM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L I+ PR  +D G+Y C A+N  G+I+S+  +L F +I +F  K    + 
Sbjct: 74  SYHYRLDGGSLAISSPRTDQDIGTYQCLATNSLGTILSQKAKLQFAYIEDFETKTRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHFGDLSYAWIFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A
Sbjct: 194 YTCLITNKEAQRRVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  GSPLP    +      L IPN + ED+G Y C ASN R    +   
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQATLEIPNFQQEDEGFYECIASNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C+A G PD  Y+W +NGE LN E       +R 
Sbjct: 312 LIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPDPWYTWLKNGERLNPE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K PL+  +    
Sbjct: 365 QIENGTLIITMLNVS-DSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG++ I C P A P+    WK+    +    R  + E+G+L I  V+R D+G+Y+C ATN
Sbjct: 424 GGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRSDAGVYTCIATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G+ ++ G LI+    +     P K+ +    ++ L C    +  ++V ++W+ NG  I
Sbjct: 484 QFGVAKNTGSLIIKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              D  +       I G   G L I N     +G+Y C VK+T+  +S    +IV GPPG
Sbjct: 543 ---DFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +   S  + W  G+ N  PI  + I ART ++  W       +    +   
Sbjct: 600 PPEDVRVTHISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGW-----QAVSTVPEILN 654

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP+ I GGGG  
Sbjct: 655 GKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGGSR 714

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN  +  Y +  R    T +  E +    +    + R  +    + 
Sbjct: 715 SELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIPLSP 773

Query: 960 YEVKVQAINDVGPGPES 976
           +EVKV   N  G GP S
Sbjct: 774 FEVKVGVYNKEGEGPLS 790



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 296/794 (37%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWIFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCLITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRRVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 262 RRLDGSPLPGKVKYSKS-----QATLEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 314 FYAPPEWEQ-KIQNTYLSIY-------DSLFWECKASGKPDPWYTWLKNGERLNPEERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 366 IENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P  T SW R  E L       + +  + ++D  L I Y     D  +Y 
Sbjct: 426 DIVIECKPNAFPRATISWKRGIESLR------QSKRVFLLEDGSLKI-YNVTRSDAGVYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ     ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 479 CIATNQFGVAKNTGSL-IIKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +  + SG Y CT         + G +IV 
Sbjct: 536 SFNGDVIDFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +      +A   L  R  +     + +  I       +G   ++ +  P I 
Sbjct: 596 GPPGPPEDVRVTHISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T  +     EYE   V  +++G          + TK +V    P  + GG  
Sbjct: 653 LNGKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y ++ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELIITWESIPEELQNGEDF-GYIVMLRPVGSTTW--TKERVPSVESSRFIYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E      ++P S +E KV   N+ G G  S+ S  Y+   D+P  AP           ++
Sbjct: 766 EN-----IIPLSPFEVKVGVYNKEGEGPLSTASIIYSG-EDEPQLAPRGTSVQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GN  I    I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGN--ITTKNITGLKANTVYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGTGPSS 891


>gi|395815721|ref|XP_003781372.1| PREDICTED: contactin-5 [Otolemur garnettii]
          Length = 1110

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 259/811 (31%), Positives = 389/811 (47%), Gaps = 34/811 (4%)

Query: 174 YQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           Y     ++  + +  GP F+++P D++F     S    + L+C   G P PSY W +   
Sbjct: 93  YHSSDALKQDESVDYGPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPIPSYRWLRN-- 148

Query: 234 VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                    ID  SD R++L  G  II++P + +D G Y C A+N FGS++S    L F 
Sbjct: 149 ------GTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNSFGSVLSREATLQFA 202

Query: 294 FIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-G 351
           ++G F+ +    +   +  G  + C PP + P + Y W  + FP+FV ED R F+S + G
Sbjct: 203 YLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETG 262

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPE 409
            LY S ++  D G+Y C V++ V++     P  PL +       +   K   +FP T   
Sbjct: 263 NLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTA 322

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           A   G  V++EC A G PVP+  W +    +P  A       +L IPNV+++D G Y CR
Sbjct: 323 A--KGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGFYECR 380

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           A N R        + +   P++   L D  +D+ + L W C+A G P  TY W +NG   
Sbjct: 381 AENSRGKNSFRGQLQVYTYPHWLEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGA-- 438

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
                P   Q R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F
Sbjct: 439 -----PYSPQSRVEMVNGVLMIHSVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTF 492

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
               L+      +G  V I C P+ +PKP   WKK    +    R  I  +G+L I   S
Sbjct: 493 PLNHLKKTIIVTKGREVVIECKPQGSPKPIISWKKGDKAVRENKRIAILPDGSLRILNAS 552

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           + D G Y C   N+ G  E    + V   P+  E  P +  +    ++ L C A  +  L
Sbjct: 553 KSDEGKYVCRGENIFGSAEIIASVSVKE-PTKIELTPKRTELTVGESVVLSCKAIHDSSL 611

Query: 710 DVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           DV + WT  G  I    D    E          L I N     AG Y C V++T   +S 
Sbjct: 612 DVTFYWTLKGQPIDFEKDGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSD 671

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
           +  ++V GPPG PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V  
Sbjct: 672 EAELLVRGPPGPPGVVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV-- 729

Query: 829 HVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
               K V +  TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  
Sbjct: 730 ----KTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRVIRTNEAVPKT 785

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
           AP+ + G  G+  +L I+WEP+  E QN     Y + +R  N T    E +         
Sbjct: 786 APTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKF 844

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + R  S    T +EVKV   N+ G GP S++
Sbjct: 845 IYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 875



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 176/762 (23%), Positives = 281/762 (36%), Gaps = 92/762 (12%)

Query: 256 GNLIINDPRQVEDRGSYHCKASNKF--GSIISESVQLAF---GFIGEFNLK---RAPEIG 307
           GNL I+   Q  D GSY C   N      ++S    L     G +GE+  K     P   
Sbjct: 262 GNLYISK-VQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTV 320

Query: 308 NQNWGKA--MFCDPPTN-YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG 364
               G    M C    N  P + +     Y P+     K         L    ++  DAG
Sbjct: 321 TAAKGTTVKMECFALGNPVPTITWMKVNGYIPS-----KARLRKSQAVLEIPNVQLDDAG 375

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
            Y C  ++     G+N     L+V+         +P+   K       +G  +R EC A 
Sbjct: 376 FYECRAEN---SRGKNSFRGQLQVY--------TYPHWLEKLNDTQLDSGSPLRWECKAT 424

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G P P+Y W + G+P    +  E  N +L I +V   D G Y C A N   A+ +S  + 
Sbjct: 425 GKPRPTYRWLKNGAPYSPQSRVEMVNGVLMIHSVNQSDAGMYQCLAENKYGAIYASAELK 484

Query: 485 IQAE-PNFTIPLTDKHM--DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           I A  P F +    K +      ++   C+  G P    SW +  + +       E++  
Sbjct: 485 ILASAPTFPLNHLKKTIIVTKGREVVIECKPQGSPKPIISWKKGDKAVR------ENKRI 538

Query: 542 YFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPS-FKKRPLESETY 599
             + D   ++R LN  + D   Y CR +N   +    A + V   +P+  +  P  +E  
Sbjct: 539 AILPDG--SLRILNASKSDEGKYVCRGENIFGSAEIIASVSVK--EPTKIELTPKRTELT 594

Query: 600 AGEGGNVTIFCNP--EAAPKPKFVWKKDGNII---GSGGR----RKIFENGNLLISPVSR 650
            GE  +V + C    +++    F W   G  I     GG     R    + +L+I  +  
Sbjct: 595 VGE--SVVLSCKAIHDSSLDVTFYWTLKGQPIDFEKDGGHFENIRAQASSADLMIRNILL 652

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA-----AHRNLQLRCSAHT 705
             +G Y C           +  L+V   P      PP + I      +   L    +A  
Sbjct: 653 MHAGRYGCRVQTTADSVSDEAELLVRGPPG-----PPGVVIVEEITESTATLSWSPAADN 707

Query: 706 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST--- 762
              +    +   +   +G   +  +  P I I G +            EYE  V +T   
Sbjct: 708 HSPISSYNLQARSPFSLGWQTVKTV--PEI-ITGDMESAMAVDLNPWVEYEFRVVATNPI 764

Query: 763 -VGKISTKTTVIVEG---PPGLPGGVQVVEVHKTSATIQW---TDGATNGRPITHYKIIA 815
             G  ST + VI      P   P  V      +    I W   ++   NG     Y +  
Sbjct: 765 GTGDPSTPSRVIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGF-GYIVAF 823

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           R N    W    + V   E  ++  R E+     + P + +E KV   N  G G P S  
Sbjct: 824 RPNGTRGWKE--KMVTSSEASKFIYRDES-----VPPLTPFEVKVGVYNNKGDG-PFSQI 875

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
               +   +P  AP+ +   G  + ++ ++W+ + +E    P  +   +W K  + E  +
Sbjct: 876 VVICSAEGEPSAAPTDVKATGVSVSEILVAWKHV-KESLGRPQGFEVGYW-KDTEQEDSA 933

Query: 936 ETLKEYGN-VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           ET+K  GN   I +  +      T Y + V+A N  G GP S
Sbjct: 934 ETVKTRGNDSSIILTGLEGN---TRYHLTVRAYNGAGYGPPS 972


>gi|149714159|ref|XP_001487987.1| PREDICTED: contactin-1 isoform 1 [Equus caballus]
          Length = 1019

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 272/807 (33%), Positives = 406/807 (50%), Gaps = 42/807 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S    ++L+C A   P P Y+W      
Sbjct: 28  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW------ 78

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    +D  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 79  --RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 135

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 136 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 195

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 196 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDVY 253

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 254 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEA 313

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 314 ENIRGKDKHHGRIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYH 373

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 374 KGELRLYD------------VTFENA----GMYQCIAENTHGVIYANAELKILALAPTFE 417

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R
Sbjct: 418 MNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITR 477

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C A N  G   S G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 478 NDGGIYTCFAENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 536

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + +IW+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 537 LTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSAS 596

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
             ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +    
Sbjct: 597 ADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYSIQTKTILSDDWKDAK-- 654

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
               +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  AP
Sbjct: 655 ---TDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAP 711

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           S +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V 
Sbjct: 712 SDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVH 770

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  +    T ++VKV+A N+ G GP S
Sbjct: 771 KDETMRPSTAFQVKVKAFNNKGDGPYS 797



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 148/668 (22%), Positives = 246/668 (36%), Gaps = 96/668 (14%)

Query: 347 VSYDGA-LYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP----HSNFQQLKFPN 401
           +S  GA L    ++  D G Y C  ++       +G  + ++ FP    H N  ++    
Sbjct: 289 ISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHHGRIY-VQAFPEWVEHINDTEVDI-- 345

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVE 461
                       G  +   CVA G P+P+  W + G    +          L + +V  E
Sbjct: 346 ------------GSDLYWPCVATGKPIPTIRWLKNGYSYHKGE--------LRLYDVTFE 385

Query: 462 DQGEYICRASNDRSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDV 518
           + G Y C A N    + ++  + I A  P F + P+  K +  +   +   C+    P  
Sbjct: 386 NAGMYQCIAENTHGVIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKP 445

Query: 519 TYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            +SW +  E L+NS  +          +D  L I  +    D  +Y C A+N      S+
Sbjct: 446 KFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANST 497

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
             L V+T        P+ ++   GE   +    + + A    F+W  +G +I        
Sbjct: 498 GTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIH 556

Query: 638 FE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 690
           ++       NG LLI       +G Y+CTA  +     +   L+V   P     L  +  
Sbjct: 557 YQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDI 616

Query: 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 750
            A    L     +     +    I T     I + D  + +T    I+G +         
Sbjct: 617 RATSVALTWSRGSDNHSPISKYSIQTKT---ILSDDWKDAKTDPPIIEGNMEAARAVDLI 673

Query: 751 DAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
              EYE   V  +T+G         KI T        P  + GG           TI W 
Sbjct: 674 PWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA 729

Query: 800 DGATNGRPIT---HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVL 850
                  P++   HY      I+A   ++   W  V+  V   +  RY  + E      +
Sbjct: 730 -------PLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----M 775

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P + ++ KV A N  G G P S +   N+  D P +AP+ +G       ++S+ WE + 
Sbjct: 776 RPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPAEVGVKVLSSSEISVHWEHVV 834

Query: 911 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            +   +  I Y     K+        T +EY        R+ +    T+Y V+V+A N  
Sbjct: 835 EKIVESYQIRYWSAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVRACNSA 888

Query: 971 GPGPESEV 978
           G GP S++
Sbjct: 889 GCGPPSDM 896


>gi|326668796|ref|XP_684096.5| PREDICTED: contactin-3-like [Danio rerio]
          Length = 1026

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 266/801 (33%), Positives = 387/801 (48%), Gaps = 44/801 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP + ++P D++  +   S   +  LSC A G P+P Y W         L   LID   D
Sbjct: 28  GPSWKREPEDLILPI--YSPQQEAVLSCEASGAPSPQYRW--------SLNGTLIDLGGD 77

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
           +R  LSGGNLII    + +D G Y C A N  G+I+S+   L F ++  F  +    +  
Sbjct: 78  ERRRLSGGNLIITGLDRDQDSGVYQCTAFNTRGTILSQRATLQFAYLENFKTQTRSAVNV 137

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C  P +   + + W  + +P+FV++D R FVS + G LY + +E  D GNY
Sbjct: 138 REGQGVVLLCGTPLHSGELTFTWVFNEYPHFVQQDSRRFVSQETGNLYIAKVEPSDVGNY 197

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + ++         PL +       +   K   +FP T P A   G  ++LEC A 
Sbjct: 198 TCVVNNTITKERVFSSPTPLVLRNDGAMGEYEPKIELHFPDTIPAA--KGSALKLECFAL 255

Query: 425 GYPVPSYNWTRRGS-PLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP  +W R      P     +N N IL IP+ + ED G Y C A N R    +   +
Sbjct: 256 GNPVPRISWRRTSDVSFPNKVKLKNSNAILEIPSFQQEDTGTYECIAENSRGKNAARGRV 315

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           S  A P++   +TD  M  + +L W C+A G P  +YSW +NGE L SE        R  
Sbjct: 316 SFHATPHWLQTMTDTAMSIEENLFWECKANGKPKPSYSWLKNGESLISE-------GRVQ 368

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I++  L+I  LN   D  MYQC A+N+    YSSA+L VL   PSF + PL     A  G
Sbjct: 369 IENGALSIFSLNLS-DGGMYQCVAENKHGIIYSSAELMVLASAPSFSQNPLSQTLKARSG 427

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
            +V++ C P A+P+   +WK+   I+    R  +F NG L I+ +++ D G Y+C A N 
Sbjct: 428 SDVSLDCRPHASPRAISLWKRGTEILQRNERTFLFPNGTLKITNITKRDGGSYTCVAKNQ 487

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   + G+LI+   P+   Q P    I    ++ L C    +  LDVA+ W  NG  I 
Sbjct: 488 FGTASTTGKLIITE-PTRISQSPSSTEITVGESVVLPCQVTADPALDVAFSWAFNGQPID 546

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E    +  G L+ I N      G+Y C+V + V  +S    ++V+GPP  P 
Sbjct: 547 FHQDADHFERVGGSFSGDLM-IRNIQLNHGGKYVCLVDTDVESLSADAILVVKGPPSPPD 605

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V V EV  ++A + W+ G  NG PIT Y I  RT +   W       +    +   G  
Sbjct: 606 MVVVEEVTDSTAQLSWSPGQDNGSPITGYAIQGRTPFTVGW-----QAVDTVPEVINGNT 660

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L  W  YEF+V+A N +G GEPS PS +  T    P  AP+ +GGGGG   +L
Sbjct: 661 LTATVVGLNAWVEYEFRVLASNSVGMGEPSPPSTKIRTEDSMPDAAPTDVGGGGGTKSEL 720

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEF-----QSETLKEYGNVGIAVVRIPSEFYY 957
            I+WEP+P E QN     Y I +R      +      + +L  Y      V R  +   +
Sbjct: 721 VITWEPVPEELQNGEGFGYIIAFRPVGMVTWTRVVISAPSLTRY------VFRNDTIPPF 774

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + + VKV A N+ G GP S +
Sbjct: 775 SPFNVKVGAFNNRGEGPFSTI 795



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 156/673 (23%), Positives = 258/673 (38%), Gaps = 83/673 (12%)

Query: 335 FPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF 394
           FPN V+       + +  L   + +Q D G Y C  ++        G     +V  H+  
Sbjct: 272 FPNKVK-----LKNSNAILEIPSFQQEDTGTYECIAENSRGKNAARG-----RVSFHATP 321

Query: 395 QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILT 454
             L+   +   +  E       +  EC A G P PSY+W + G  L      +  N  L+
Sbjct: 322 HWLQTMTDTAMSIEE------NLFWECKANGKPKPSYSWLKNGESLISEGRVQIENGALS 375

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTI-PLTDK-HMDNQADLTWTCE 511
           I ++ + D G Y C A N    + SS  + + A  P+F+  PL+      + +D++  C 
Sbjct: 376 IFSLNLSDGGMYQCVAENKHGIIYSSAELMVLASAPSFSQNPLSQTLKARSGSDVSLDCR 435

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQL 571
               P     W R  E+L        ++  +   +  L I  +  +RD   Y C AKNQ 
Sbjct: 436 PHASPRAISLWKRGTEILQ------RNERTFLFPNGTLKITNIT-KRDGGSYTCVAKNQF 488

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKDGNII 629
            T  ++ +L ++T      + P  +E   GE  +V + C   A P     F W  +G  I
Sbjct: 489 GTASTTGKL-IITEPTRISQSPSSTEITVGE--SVVLPCQVTADPALDVAFSWAFNGQPI 545

Query: 630 GSGGRRKIFE------NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLIVLHGPSYY 682
                   FE      +G+L+I  +  +  G Y C   T+V  +  S   ++V+ GP   
Sbjct: 546 DFHQDADHFERVGGSFSGDLMIRNIQLNHGGKYVCLVDTDVESL--SADAILVVKGPPS- 602

Query: 683 EQLPPKITIA---AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 739
              PP + +         QL  S   +    +   +   G     +    ++T    I+G
Sbjct: 603 ---PPDMVVVEEVTDSTAQLSWSPGQDNGSPITG-YAIQGRTPFTVGWQAVDTVPEVING 658

Query: 740 GLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVE 788
             L  T        EYE   +  ++VG         KI T+ ++    P  + GG     
Sbjct: 659 NTLTATVVGLNAWVEYEFRVLASNSVGMGEPSPPSTKIRTEDSMPDAAPTDVGGGGGT-- 716

Query: 789 VHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
             K+   I W    +   NG     Y I  R     TW  V   +    + RY  R +  
Sbjct: 717 --KSELVITWEPVPEELQNGEGF-GYIIAFRPVGMVTWTRVV--ISAPSLTRYVFRND-- 769

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
               + P+S +  KV A N  G G P S      +  + P  AP ++        D+ ++
Sbjct: 770 ---TIPPFSPFNVKVGAFNNRGEG-PFSTIATVFSAEEVPSIAPEKVSAKSLSAADIEVT 825

Query: 906 WEPLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           WEP+    +     Y  ++W    K DT  +      Y  V ++ ++  +++Y     + 
Sbjct: 826 WEPIASIPERVLG-YEVVYWEDDTKPDTVGKVRITGNYTAVNVSGLQGNTQYY-----LA 879

Query: 964 VQAINDVGPGPES 976
           V A N  G GP+S
Sbjct: 880 VCAFNTAGTGPQS 892


>gi|149036846|gb|EDL91464.1| rCG56227 [Rattus norvegicus]
          Length = 1041

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 268/801 (33%), Positives = 394/801 (49%), Gaps = 44/801 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P FI++P DV+F  DLS+    ++I LSC A GYP+P Y W +            ID   
Sbjct: 37  PIFIQEPQDVIFPLDLSR----SEIILSCTASGYPSPHYRWKQN--------GTDIDFSM 84

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L I+ PR  +D G Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 85  TYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAYIEDFETKSRSTVS 144

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+EDKR FVS + G LY + +E  D GN
Sbjct: 145 VREGQGVVLLCGPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGN 204

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C V +K +     GP  PL     ++    ++       FPE  +A     V+LEC A
Sbjct: 205 YTCFVTNKEAHRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 262

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  GSP+P    + N    L IP  + ED+G Y C A N R    +   
Sbjct: 263 LGNPVPDISWRRLDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQ 322

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C+A G P+ +Y+W +NGE LN+E       +R 
Sbjct: 323 LIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGERLNTE-------ERI 375

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
             ++  L I  LN   D  +YQC A+N+ +T Y++A+LRVL   P F K P++       
Sbjct: 376 QTENGTLIITMLNVS-DSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKXXXXXX 434

Query: 603 --GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
             GG+++I C P A PK    WK+    +    R    E+G+L I  V+R D+G Y+C A
Sbjct: 435 XXGGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVA 494

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
           TN  G  +S G LIV    +     P K+ +    ++ L C    +  ++V ++W  NG 
Sbjct: 495 TNQFGNGKSSGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGD 553

Query: 721 RIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
            I   DL +       I G   G L I N     +G+Y C V++T+ ++S    +IV GP
Sbjct: 554 VI---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGP 610

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V+V  +  T++ + W  G  N  PI  + I  RT ++  W       +    + 
Sbjct: 611 PGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEI 665

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG
Sbjct: 666 LNGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGG 725

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WEP+P E QN     Y I +R    T +  E +    +    + R  S    
Sbjct: 726 SRSELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVALVESSKF-IYRNESIMPL 784

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + +EVKV   N+ G G  S V
Sbjct: 785 SPFEVKVGVYNNEGEGSLSTV 805



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 189/795 (23%), Positives = 292/795 (36%), Gaps = 98/795 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNK 279
           SY+W   D   YVQ+           DKR  +S   GNL I    +  D G+Y C  +NK
Sbjct: 165 SYDWTFNDNPLYVQE-----------DKRRFVSQNTGNLYIAK-VEPSDVGNYTCFVTNK 212

Query: 280 FGSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYY 329
                 +      VQ   G +GE+  K   R PE     ++    + C    N P  +  
Sbjct: 213 EAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDIS 271

Query: 330 WAR-DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
           W R D  P      K  + +    L     +Q D G Y C   +     GRN     L  
Sbjct: 272 WRRLDGSP---MPGKVKYSNSQATLEIPKFQQEDEGFYECVAGNL---RGRNLAKGQLIF 325

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN 448
           +    ++Q K  N +   +       D +  EC A G P PSY W + G  L      + 
Sbjct: 326 YAPPEWEQ-KIQNTYLSIY-------DSLFWECKASGNPNPSYTWLKNGERLNTEERIQT 377

Query: 449 FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ---- 503
            N  L I  + V D G Y C A N    + ++  + + A  P+F+     K         
Sbjct: 378 ENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKXXXXXXXXG 437

Query: 504 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
            D++  C+    P  + SW R  E L       + +  +F++D  L I  +    D   Y
Sbjct: 438 GDISIECKPNAFPKASISWKRGTENLK------QSKRVFFLEDGSLKICNVT-RSDAGSY 490

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 621
            C A NQ     SS  L ++  +      P + +   GE  ++ + C     P  +  FV
Sbjct: 491 TCVATNQFGNGKSSGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPTMEVLFV 547

Query: 622 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           W  +G++I        FE       G+L+I  +    SG Y CT         +   +IV
Sbjct: 548 WYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIV 607

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735
              P   E +  +   +    L  R        + +  I T     +G   +  +  P I
Sbjct: 608 RGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI 665

Query: 736 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 784
            ++G     T    +   EYE   V  + +G          + TK ++    P  + GG 
Sbjct: 666 -LNGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGG 724

Query: 785 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
                 ++   I W    +   NG     Y I+ R   ++TW    E V   E  ++  R
Sbjct: 725 G----SRSELVITWEPIPEELQNGEGF-GYIIMFRPVGSTTWMK--EKVALVESSKFIYR 777

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            E+     ++P S +E KV   N  G G  S+ S  Y+   D+P  AP           D
Sbjct: 778 NES-----IMPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPRLAPRGTSVQSFSASD 831

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           + +SW  +   +     + Y++ +   N  E     ++  GNV      I      T Y 
Sbjct: 832 MEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRANTIYF 889

Query: 962 VKVQAINDVGPGPES 976
             V+A N  G GP S
Sbjct: 890 ASVRAYNTAGTGPSS 904


>gi|109035933|ref|XP_001101681.1| PREDICTED: contactin-6 isoform 2 [Macaca mulatta]
 gi|355559496|gb|EHH16224.1| Neural recognition molecule NB-3 [Macaca mulatta]
          Length = 1029

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 264/805 (32%), Positives = 394/805 (48%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    +++ L C A GYP+P Y W +           
Sbjct: 20  DGLLSRPIFTQEPHDVIFPLDLSK----SEVILKCAANGYPSPHYRWKQN--------GT 67

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L I+ P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 68  DIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 127

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 128 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 187

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 188 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 245

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 246 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 305

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 306 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNGERLNPE---- 361

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 362 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 417

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
            ++   GG++ I C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y
Sbjct: 418 NSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSDAGSY 477

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 478 TCIATNQFGTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 536

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 537 FNGDII---DLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADII 593

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  V+V E+  T++ + W  G  N  PI  + I  +T ++  W       +  
Sbjct: 594 VRGPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGW-----QAVAT 648

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  + 
Sbjct: 649 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVN 708

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S
Sbjct: 709 GGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRF-VYRNES 767

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 768 IIPLSPFEVKVGVYNNEGEGSLSTV 792



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 186/794 (23%), Positives = 293/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 262 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  +C A G P P Y W + G  L      +
Sbjct: 314 FYAPPEWEQ-KIQNTYLSIY-------DNLLWKCKASGKPNPWYTWLKNGERLNPEERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 366 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 426 DIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 479 CIATNQFGTAKNAGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G+II        FE       G+L+I  +  + SG Y CT         +   +IV 
Sbjct: 536 FFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 596 GPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGWQAVATV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V    P  + GG  
Sbjct: 653 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVASVESSRFVYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 766 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGTGPSS 891


>gi|109035936|ref|XP_001101588.1| PREDICTED: contactin-6 isoform 1 [Macaca mulatta]
          Length = 1024

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 264/809 (32%), Positives = 396/809 (48%), Gaps = 42/809 (5%)

Query: 180 IENPDKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDR 237
           ++  D +   P F ++P DV+F  DLSK    +++ L C A GYP+P Y W +       
Sbjct: 11  LQRGDGLLSRPIFTQEPHDVIFPLDLSK----SEVILKCAANGYPSPHYRWKQN------ 60

Query: 238 LVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE 297
                ID      + L GG+L I+ P   +D G Y C A+N  G+I+S   +L F +I +
Sbjct: 61  --GTDIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIED 118

Query: 298 FNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYF 355
           F  K    +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY 
Sbjct: 119 FETKTRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYI 178

Query: 356 SALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG- 414
           + +E  D GNY+C + +K +     GP  PL     ++    ++       FPE  +A  
Sbjct: 179 AKVEPSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAK 236

Query: 415 -DKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASN 472
              V+LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN
Sbjct: 237 DSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASN 296

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
            R    +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E
Sbjct: 297 LRGRNLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNGERLNPE 356

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
                  +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K 
Sbjct: 357 -------ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKS 408

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDD 652
           P++  ++   GG++ I C P A P+    WK+    +    R  + E+G+L I  V+R D
Sbjct: 409 PVKKNSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSD 468

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V 
Sbjct: 469 AGSYTCIATNQFGTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVV 527

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTK 769
           ++W  NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S  
Sbjct: 528 FVWFFNGDII---DLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAV 584

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
             +IV GPPG P  V+V E+  T++ + W  G  N  PI  + I  +T ++  W      
Sbjct: 585 ADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGW-----Q 639

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
            +    +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP
Sbjct: 640 AVATVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAP 699

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
             + GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V 
Sbjct: 700 VNVNGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRF-VY 758

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           R  S    + +EVKV   N+ G G  S V
Sbjct: 759 RNESIIPLSPFEVKVGVYNNEGEGSLSTV 787



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 186/794 (23%), Positives = 293/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 149 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 197

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 198 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 256

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 257 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 308

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  +C A G P P Y W + G  L      +
Sbjct: 309 FYAPPEWEQ-KIQNTYLSIY-------DNLLWKCKASGKPNPWYTWLKNGERLNPEERIQ 360

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 361 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGG 420

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 421 DIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSYT 473

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 474 CIATNQFGTAKNAGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 530

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G+II        FE       G+L+I  +  + SG Y CT         +   +IV 
Sbjct: 531 FFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVR 590

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 591 GPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGWQAVATV--PEI- 647

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V    P  + GG  
Sbjct: 648 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGG 707

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 708 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVASVESSRFVYRN 760

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 761 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEM 814

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 815 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 872

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 873 SVRAYNTAGTGPSS 886


>gi|330688421|ref|NP_001178388.1| contactin-6 precursor [Bos taurus]
          Length = 1030

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 267/800 (33%), Positives = 399/800 (49%), Gaps = 48/800 (6%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P F ++P D +F  DLSK    ++I L+C A GYP P Y W K +          ID   
Sbjct: 26  PIFTQEPQDAIFPLDLSK----SEIILNCAANGYPLPHYRW-KHNGAD-------IDFSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L I+ PR  +D G+Y C A+N  G+I+S+  +L F +I +F  K    + 
Sbjct: 74  SYHYRLDGGSLAISSPRTDQDIGTYQCLATNSLGTILSQKAKLQFAYIEDFETKTRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A
Sbjct: 194 YTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R    +   
Sbjct: 252 LGNPIPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + D ++     L W C+A G PD  Y+W +NGE LN +       +R 
Sbjct: 312 LIFYAPPEWEQKIQDTYLSIYDSLFWECKASGKPDPWYTWLKNGERLNLD-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K PL+  +    
Sbjct: 365 QIENGTLIITMLNVS-DSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG++ I C P A P+    WK+    +    R  + E+G+L I  V+R D+G+Y+C ATN
Sbjct: 424 GGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRSDAGLYTCIATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G+ ++ G LI+    +     P  + +    ++ L C    +  +DV ++W+ NG  I
Sbjct: 484 QFGVAKNTGSLIIKER-TVITVPPSTMDVTVGESIVLPCQVSRDPSVDVVFVWSFNGDVI 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              D  +       I G   G L I N     +G+Y C VK+T+  +S    +IV GPPG
Sbjct: 543 ---DFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS---EHVIGKEVD 836
            P  V+V  +  T+  + W  G+ N  PI  + I ART ++  W  VS   E + GK  +
Sbjct: 600 PPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFN 659

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
                  A++   L PW  YEF+V+AGN +G GEPS PS    T +  P  AP+ I GGG
Sbjct: 660 -------ATVVG-LNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGG 711

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
           G   +L I+WE +P E QN  +  Y +  R    T +  E +    +    + R  +   
Sbjct: 712 GSRSELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIP 770

Query: 957 YTEYEVKVQAINDVGPGPES 976
            + +E+KV   N  G GP S
Sbjct: 771 LSPFEIKVGVYNKEGEGPLS 790



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 186/794 (23%), Positives = 295/794 (37%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PIPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 262 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  + +   +       D +  EC A G P P Y W + G  L  +   +
Sbjct: 314 FYAPPEWEQ-KIQDTYLSIY-------DSLFWECKASGKPDPWYTWLKNGERLNLDERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 366 IENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P  T SW R  E L       + +  + ++D  L I Y     D  +Y 
Sbjct: 426 DIVIECKPNAFPRATISWKRGIESLR------QSKRVFLLEDGSLKI-YNVTRSDAGLYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ     ++  L ++  +      P   +   GE  ++ + C     P     FVW
Sbjct: 479 CIATNQFGVAKNTGSL-IIKERTVITVPPSTMDVTVGE--SIVLPCQVSRDPSVDVVFVW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +  + SG Y CT         + G +IV 
Sbjct: 536 SFNGDVIDFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  K   +    L  R  +     + +  I       +G   ++ +  P I 
Sbjct: 596 GPPGPPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T        EYE   V  +++G          + TK++V    P  + GG  
Sbjct: 653 LNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y ++ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELIITWESIPEELQNGEDF-GYIVMLRPVGSTTW--TKERVPSVESSRFIYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E      ++P S +E KV   N+ G G  S+ S  Y+   D+P  AP           ++
Sbjct: 766 EN-----IIPLSPFEIKVGVYNKEGEGPLSTASIIYSG-EDEPQLAPRGTSVQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GN  I    I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGN--ITTKNITGLKANTVYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGTGPSS 891


>gi|402859564|ref|XP_003894224.1| PREDICTED: contactin-6 [Papio anubis]
          Length = 1045

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 265/805 (32%), Positives = 393/805 (48%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    +++ L C A GYP+P Y W +           
Sbjct: 36  DGLLSRPIFTQEPHDVIFPLDLSK----SEVILKCAANGYPSPHYRWKQN--------GT 83

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L I+ P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 84  DIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 143

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 144 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 203

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 204 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 261

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 262 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 321

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 322 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNGERLNPE---- 377

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I +  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 378 ---ERIQIDNGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 433

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
            ++   GG++ I C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y
Sbjct: 434 NSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSDAGSY 493

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 494 TCIATNQFGTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 552

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 553 FNGDII---DLKKGIAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADII 609

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  V+V E+  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 610 VRGPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVAT 664

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 665 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNIN 724

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y + +R    T +  E +    +    V R  S
Sbjct: 725 GGGGSRSELVITWESIPEELQNGEGFGYIVMFRPVGSTTWTKEKVASVESSRF-VYRNES 783

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 784 IIPLSPFEVKVGVYNNEGEGSLSTV 808



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 185/794 (23%), Positives = 293/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 170 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 218

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 219 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 277

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 278 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 329

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  +C A G P P Y W + G  L      +
Sbjct: 330 FYAPPEWEQ-KIQNTYLSIY-------DNLLWKCKASGKPNPWYTWLKNGERLNPEERIQ 381

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 382 IDNGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGG 441

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 442 DIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSYT 494

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 495 CIATNQFGTAKNAGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 551

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G+II        FE       G+L+I  +  + SG Y CT         +   +IV 
Sbjct: 552 FFNGDIIDLKKGIAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVR 611

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 612 GPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 668

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V    P  + GG  
Sbjct: 669 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNINGGGG 728

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y ++ R   ++TW    E V   E  R+  R 
Sbjct: 729 ----SRSELVITWESIPEELQNGEGF-GYIVMFRPVGSTTW--TKEKVASVESSRFVYRN 781

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 782 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEM 835

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 836 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 893

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 894 SVRAYNTAGTGPSS 907


>gi|281337428|gb|EFB13012.1| hypothetical protein PANDA_013904 [Ailuropoda melanoleuca]
          Length = 967

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 268/793 (33%), Positives = 401/793 (50%), Gaps = 41/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S    ++L+C A   P P Y+W        R+    ID  SD
Sbjct: 9   GPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW--------RMNNGDIDLTSD 58

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 59  -RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 117

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 118 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 177

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 178 YSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDIYALMGQNVTLECFAL 235

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N+R   +    I 
Sbjct: 236 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIY 295

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 296 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------ 349

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 350 ------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGG 399

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D GIY+C A N  
Sbjct: 400 RVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNR 459

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   + G L++   P+     P    I    N  ++C+A  +  LD+ +IW+ NG  I  
Sbjct: 460 GRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDF 518

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 519 NKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 578

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 579 LRIEDIRATSVALSWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 633

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 634 AARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELT 693

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 694 ITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVK 752

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 753 VKAFNNKGDGPYS 765



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 231/596 (38%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 314 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 365

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 366 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 425

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N  + R ++    V+T     
Sbjct: 426 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENN-RGRANNTGTLVITDPTRI 476

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    F+W  +G +I        ++       NG 
Sbjct: 477 ILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGE 536

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 537 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALSWS 594

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 595 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 653

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 654 NTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWV-------PLSRE 702

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 703 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDE-----TMRPSTAFQVKVKA 755

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   N+  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 756 FNNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVVEKIVESYQIRYW 814

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+        T +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 815 AAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 864


>gi|354489954|ref|XP_003507125.1| PREDICTED: contactin-6-like [Cricetulus griseus]
          Length = 1028

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 266/806 (33%), Positives = 392/806 (48%), Gaps = 56/806 (6%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P FI++P DV+F  DLS+    ++I L+C A GYP+P Y W +            ID   
Sbjct: 26  PIFIQEPQDVIFPLDLSR----SEIILTCTANGYPSPHYRWKQN--------GTDIDFSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GGNL I+ PR  +D G+Y C  +N  G+I+S   +L F +I +F  K    + 
Sbjct: 74  TYHYRLDGGNLAISSPRTDQDIGTYQCLVTNTVGTILSRKAKLQFAYIEDFETKTRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+EDKR FVS   G LY + +E  D GN
Sbjct: 134 VREGQGGTVLCGPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQVTGNLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C V +K +     GP  PL     ++    ++       FPE  +A     V+LEC A
Sbjct: 194 YTCFVTNKEAHRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  G+P+P    +     IL IP    ED+G Y C A N R    +   
Sbjct: 252 LGNPVPDISWRRLDGNPMPGKVKYSKSQAILEIPEFHQEDEGYYECIAGNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C+A G P+  Y+W +NGE L+ E       +R 
Sbjct: 312 LIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPNPWYTWLKNGERLHPE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +T Y++A+LRVL   P F K P++  +    
Sbjct: 365 QIENGTLIITMLNVS-DSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKTSVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+++I C P A PK    WK+    +    R  + E+G+L I  V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTESLRQSKRVFLLEDGSLKICNVTRSDAGSYTCVATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G  +S G LIV    +     P K+ +    ++ L C    +  ++V ++W  NG  I
Sbjct: 484 QFGNGKSSGSLIVKE-KTVITTPPSKMDVTVGESIVLPCQVSHDPTMEVVFVWYFNGDVI 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +       I G   G L I N     +G+Y C V++T+ ++S    +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G  N  PI  + I  RT ++  W       +    +   
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVTTIPEILN 654

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG  
Sbjct: 655 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPIVAPVNINGGGGSR 714

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y + +R    T +  E         +A+V      Y  E
Sbjct: 715 SELVITWESIPEELQNGEGFGYIVMFRPVGSTTWMKER--------VALVESSRYIYRNE 766

Query: 960 -------YEVKVQAINDVGPGPESEV 978
                  +EVKV   N+ G G  S V
Sbjct: 767 SIMPLSPFEVKVGVYNNEGEGSLSTV 792



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 190/795 (23%), Positives = 289/795 (36%), Gaps = 100/795 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNK 279
           SY W   D   YVQ+           DKR  +S   GNL I    +  D G+Y C  +NK
Sbjct: 154 SYAWTFNDNPLYVQE-----------DKRRFVSQVTGNLYIAK-VEPSDVGNYTCFVTNK 201

Query: 280 FGSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYY 329
                 +      VQ   G +GE+  K   R PE     ++    + C    N P  +  
Sbjct: 202 EAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDIS 260

Query: 330 WAR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
           W R   +  P  V+  K         L      Q D G Y C   +     GRN     L
Sbjct: 261 WRRLDGNPMPGKVKYSKS-----QAILEIPEFHQEDEGYYECIAGNL---RGRNLAKGQL 312

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
             +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      
Sbjct: 313 IFYAPPEWEQ-KIQNTYLSIY-------DSLFWECKASGKPNPWYTWLKNGERLHPEERI 364

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ-- 503
           +  N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q  
Sbjct: 365 QIENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKTSVVQVG 424

Query: 504 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
            D++  C+    P  + SW R  E L       + +  + ++D  L I  +    D   Y
Sbjct: 425 GDISIECKPNAFPKASISWKRGTESLR------QSKRVFLLEDGSLKICNVT-RSDAGSY 477

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 621
            C A NQ     SS  L ++  K      P + +   GE  ++ + C     P  +  FV
Sbjct: 478 TCVATNQFGNGKSSGSL-IVKEKTVITTPPSKMDVTVGE--SIVLPCQVSHDPTMEVVFV 534

Query: 622 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           W  +G++I        FE       G+L+I  +    SG Y CT         +   +IV
Sbjct: 535 WYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIV 594

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735
              P   E +  +   +    L  R        + +  I T     +G   +  +  P I
Sbjct: 595 RGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVTTI--PEI 652

Query: 736 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 784
            ++G     T    +   EYE   V  + +G          + TK +V +  P  + GG 
Sbjct: 653 -LNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPIVAPVNINGGG 711

Query: 785 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
                 ++   I W    +   NG     Y ++ R   ++TW    E V   E  RY  R
Sbjct: 712 G----SRSELVITWESIPEELQNGEGF-GYIVMFRPVGSTTWMK--ERVALVESSRYIYR 764

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            E+     ++P S +E KV   N  G G  S+ S  Y+   D+P  AP           +
Sbjct: 765 NES-----IMPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQLAPRGTSVQSFSASE 818

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           + +SW  +   +     + Y++ +   N  E      +  GNV      I      T Y 
Sbjct: 819 MEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKSRVSGNV--TTKNITGLRANTIYF 876

Query: 962 VKVQAINDVGPGPES 976
             V+A N  G GP S
Sbjct: 877 ASVRAYNTAGTGPSS 891


>gi|354467484|ref|XP_003496199.1| PREDICTED: contactin-5-like [Cricetulus griseus]
          Length = 1089

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 260/825 (31%), Positives = 394/825 (47%), Gaps = 35/825 (4%)

Query: 159 ASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYA 218
            + Q+ H  +N    Y      +  + +  GP F+++P DV+F     S   ++ L+C  
Sbjct: 61  GAAQQYHSPVN---LYHSSDAFKQDESVDYGPVFMQEPDDVIFPTD--SDEKNVALNCEV 115

Query: 219 GGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASN 278
            G P P+Y W +            ID  SD R++L  G  II++P +V D G Y C A+N
Sbjct: 116 RGNPTPTYRWLRN--------GTEIDLESDYRYSLIDGTFIISNPNEVRDSGLYQCLATN 167

Query: 279 KFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPN 337
            FGSI+S    L F ++G F+ + R+     +  G  + C PP + P + Y W  + FP+
Sbjct: 168 TFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPS 227

Query: 338 FVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ 396
           FV ED R F+S + G LY S ++  D G+Y C V++ V++     P  PL +       +
Sbjct: 228 FVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGE 287

Query: 397 L--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILT 454
              K   +FP T   A   G  V++EC A G PVP+  W +    +P  +       +L 
Sbjct: 288 YEPKIEVHFPFTVTAA--KGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQAVLE 345

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG 514
           IPN++++D G Y C A N R        + I   P++   L D  +D+ + L W C+A G
Sbjct: 346 IPNLQLDDAGLYECTAENSRGRNSFRGQLQIYTYPHWVQKLNDTQLDSGSPLQWECKATG 405

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  TY W +NG        P+  Q R    + +L I  +N + D  MYQC A+N+    
Sbjct: 406 KPKPTYRWLKNGA-------PILPQSRVDTVNGILAIHSVN-QSDAGMYQCLAENKYGAI 457

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR 634
           Y+SA+L+VL   PSF+   ++      +   V I C P+ APKP   W+K    + S  R
Sbjct: 458 YASAELKVLASPPSFELNQVKKTIIVTKDREVLIECQPQGAPKPAISWRKGDKAVRSNKR 517

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
             I  +G+L I   S+ D G Y C   N+ G  E    L V   P+  E  P +  +   
Sbjct: 518 IAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-PTRIELTPKRTELTVG 576

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAG 753
            ++ L C A  +  LDV + WT  G  I    +    E+         L I N     AG
Sbjct: 577 ESIVLNCKAIHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAG 636

Query: 754 EYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI 813
            Y C V++T   +S +  ++V GPPG PG V V E+ +++AT+ W+    N  PI+ Y +
Sbjct: 637 RYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWSPATDNHSPISSYNL 696

Query: 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
            AR+ ++  W      ++    +  TG  E+++   L PW  YEF+V+A N +G G+PS 
Sbjct: 697 QARSPFSLGW-----QIVKTVPEVITGDMESAMAVDLNPWVEYEFRVVASNPIGTGDPSI 751

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
           PS    T    P  APS + G  G+  +L I+WEP+  E QN     Y + +R  N T  
Sbjct: 752 PSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRG 810

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             E +         + R  S    T +EVKV   N+ G GP S++
Sbjct: 811 WKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 855


>gi|16758574|ref|NP_446198.1| contactin-5 precursor [Rattus norvegicus]
 gi|55976161|sp|P97527.1|CNTN5_RAT RecName: Full=Contactin-5; AltName: Full=Neural recognition
           molecule NB-2; Flags: Precursor
 gi|1752643|dbj|BAA13311.1| NB-2 [Rattus norvegicus]
 gi|149020699|gb|EDL78504.1| rCG31728 [Rattus norvegicus]
          Length = 1099

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 256/796 (32%), Positives = 385/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C   G P+P+Y W +            ID  SD
Sbjct: 98  GPVFVQEPDDIIFPTD--SDEKKVALNCEVRGNPSPTYRWLRN--------GTEIDLESD 147

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R+++  G  IIN+P +  D G Y C A+N FGSI+S    L F ++G F+ + R+    
Sbjct: 148 YRYSMIDGTFIINNPSESRDSGLYQCLATNTFGSILSREATLQFAYLGNFSGRTRSAVSV 207

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 208 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 267

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 268 ICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPTTVTAA--KGTTVKMECFAL 325

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  +       +L IPN++++D G Y C A N R        + 
Sbjct: 326 GNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQ 385

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           I   P++   L D  +D+ + L W C+A G P  TY W +NG        PL  Q R   
Sbjct: 386 IYTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDT 438

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   PSF+   ++      +  
Sbjct: 439 ANGVLAIHSVN-QSDAGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDR 497

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   W+K    +    R  I  +G+L I   S+ D G Y C   N+ 
Sbjct: 498 EVLIECKPQGSPKPAISWRKGDKAVRGNKRIAILPDGSLRILNASKADEGKYICQGVNIF 557

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    + V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 558 GSAEIIASVSVKE-PTRIELTPKRTELTVGESIVLNCKAMHDSSLDVTFYWTLKGQPIDF 616

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 617 EKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGV 676

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ +++AT+ W+    N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 677 VIVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGWQTV------KTVPEVITGDM 730

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS PS    T    P  APS + GG G+  +L
Sbjct: 731 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGGSGRRHEL 790

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +    +    + R  S    T +EV
Sbjct: 791 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEV 849

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 850 KVGVYNNKGDGPFSQI 865


>gi|345786236|ref|XP_541801.3| PREDICTED: contactin-6 isoform 1 [Canis lupus familiaris]
          Length = 1028

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 266/799 (33%), Positives = 395/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P F ++P DV+F  DL K    ++I L+C A GYP+P Y W +            ID + 
Sbjct: 26  PIFTEEPQDVIFPLDLPK----SEIILNCAATGYPSPHYRWKQN--------GTDIDFIM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GGNL I+ PR  +D G Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 74  SYHYRLDGGNLAISSPRTDQDIGIYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSMVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+EDKR FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A
Sbjct: 194 YTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  G+PLP    +     IL IPN + ED+G Y C A N R    +   
Sbjct: 252 LGNPVPDISWRRLDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C A G P+  Y+W +NGE LN E       +R 
Sbjct: 312 LIFYAPPEWEQKIQNTYLSIYDSLFWECRASGKPNPWYTWLKNGERLNPE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++  +    
Sbjct: 365 QIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG++TI C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y+C ATN
Sbjct: 424 GGDITIECKPNAFPRAVISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G+ ++ G L+V    +     P K+ +    ++ L C    +  ++V +IW+ NG  I
Sbjct: 484 QFGVAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +  T    I G   G L I N     +G+Y C VK+T+  +S    +IV GPPG
Sbjct: 543 ---DLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G+ N  PI  + + ART ++  W       +    +   
Sbjct: 600 PPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILN 654

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS  S    T A  P  AP+ I GGGG  
Sbjct: 655 GKTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSR 714

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y I  R    T +  + +    +    V R  S    + 
Sbjct: 715 SELVITWESIPEELQNGEEFGYIIMLRPVGSTSWTKKRVPSVESSRF-VYRNESITPLSP 773

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S V
Sbjct: 774 FEVKVGVYNNEGEGSLSTV 792



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 184/795 (23%), Positives = 290/795 (36%), Gaps = 100/795 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNK 279
           SY W   D   YVQ+           DKR  +S   GNL I    +  D G+Y C  +NK
Sbjct: 154 SYAWTFNDNPLYVQE-----------DKRRFVSQETGNLYIAK-VEPSDVGNYTCFITNK 201

Query: 280 FGSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYY 329
                 +      VQ   G +GE+  K   R PE     ++    + C    N P  +  
Sbjct: 202 EAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDIS 260

Query: 330 WAR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
           W R   +  P  V+  K         L     +Q D G Y C   +     GRN     L
Sbjct: 261 WRRLDGNPLPGKVKYSKS-----QAILEIPNFQQEDEGFYECIAGNL---RGRNLAKGQL 312

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
             +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      
Sbjct: 313 IFYAPPEWEQ-KIQNTYLSIY-------DSLFWECRASGKPNPWYTWLKNGERLNPEERI 364

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ-- 503
           +  N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q  
Sbjct: 365 QIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVG 424

Query: 504 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
            D+T  C+    P    SW R  E        L    R F+ ++     Y     D   Y
Sbjct: 425 GDITIECKPNAFPRAVISWKRGME-------SLRQSKRVFLSEDGSLKIYNVTRSDAGSY 477

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 621
            C A NQ     ++  L V+  +      P + +   GE  ++ + C     P  +  F+
Sbjct: 478 TCIATNQFGVAKNTGSL-VVKERTVITIPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFI 534

Query: 622 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           W  +G++I        FE       G+L+I  +  + SG Y CT         +   +IV
Sbjct: 535 WSFNGDVIDLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIV 594

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735
              P   E +  +   +    L  R  +     + +  +       +G   ++ +  P I
Sbjct: 595 RGPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTV--PEI 652

Query: 736 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 784
            ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG 
Sbjct: 653 -LNGKTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGG 711

Query: 785 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
                 ++   I W    +   NG     Y I+ R   +++W    + V   E  R+  R
Sbjct: 712 G----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTSW--TKKRVPSVESSRFVYR 764

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            E+     + P S +E KV   N  G G  S+ S  Y+   D+P  AP           +
Sbjct: 765 NES-----ITPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQLAPGGTSVQSFSASE 818

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           + +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y 
Sbjct: 819 MEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYF 876

Query: 962 VKVQAINDVGPGPES 976
             V+A N  G GP S
Sbjct: 877 ASVRAYNSAGAGPSS 891


>gi|296475001|tpg|DAA17116.1| TPA: contactin 6 [Bos taurus]
          Length = 1018

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 266/800 (33%), Positives = 398/800 (49%), Gaps = 48/800 (6%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P F ++P D +F  DLSK    ++I L+C A GYP P Y W        +     ID   
Sbjct: 16  PIFTQEPQDAIFPLDLSK----SEIILNCAANGYPLPHYRW--------KHNGADIDFSM 63

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GG+L I+ PR  +D G+Y C A+N  G+I+S+  +L F +I +F  K    + 
Sbjct: 64  SYHYRLDGGSLAISSPRTDQDIGTYQCLATNSLGTILSQKAKLQFAYIEDFETKTRSTVS 123

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GN
Sbjct: 124 VREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGN 183

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A
Sbjct: 184 YTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 241

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R    +   
Sbjct: 242 LGNPIPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQ 301

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + D ++     L W C+A G PD  Y+W +NGE LN +       +R 
Sbjct: 302 LIFYAPPEWEQKIQDTYLSIYDSLFWECKASGKPDPWYTWLKNGERLNLD-------ERI 354

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K PL+  +    
Sbjct: 355 QIENGTLIITMLNVS-DSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQV 413

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG++ I C P A P+    WK+    +    R  + E+G+L I  V+R D+G+Y+C ATN
Sbjct: 414 GGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRSDAGLYTCIATN 473

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G+ ++ G LI+    +     P  + +    ++ L C    +  +DV ++W+ NG  I
Sbjct: 474 QFGVAKNTGSLIIKER-TVITVPPSTMDVTVGESIVLPCQVSRDPSVDVVFVWSFNGDVI 532

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              D  +       I G   G L I N     +G+Y C VK+T+  +S    +IV GPPG
Sbjct: 533 ---DFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPG 589

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS---EHVIGKEVD 836
            P  V+V  +  T+  + W  G+ N  PI  + I ART ++  W  VS   E + GK  +
Sbjct: 590 PPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFN 649

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
                  A++   L PW  YEF+V+AGN +G GEPS PS    T +  P  AP+ I GGG
Sbjct: 650 -------ATVVG-LNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGG 701

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
           G   +L I+WE +P E QN  +  Y +  R    T +  E +    +    + R  +   
Sbjct: 702 GSRSELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIP 760

Query: 957 YTEYEVKVQAINDVGPGPES 976
            + +E+KV   N  G GP S
Sbjct: 761 LSPFEIKVGVYNKEGEGPLS 780



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 186/794 (23%), Positives = 295/794 (37%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 144 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 192

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 193 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PIPDISW 251

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 252 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 303

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  + +   +       D +  EC A G P P Y W + G  L  +   +
Sbjct: 304 FYAPPEWEQ-KIQDTYLSIY-------DSLFWECKASGKPDPWYTWLKNGERLNLDERIQ 355

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 356 IENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQVGG 415

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P  T SW R  E L       + +  + ++D  L I Y     D  +Y 
Sbjct: 416 DIVIECKPNAFPRATISWKRGIESLR------QSKRVFLLEDGSLKI-YNVTRSDAGLYT 468

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ     ++  L ++  +      P   +   GE  ++ + C     P     FVW
Sbjct: 469 CIATNQFGVAKNTGSL-IIKERTVITVPPSTMDVTVGE--SIVLPCQVSRDPSVDVVFVW 525

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +  + SG Y CT         + G +IV 
Sbjct: 526 SFNGDVIDFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVR 585

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  K   +    L  R  +     + +  I       +G   ++ +  P I 
Sbjct: 586 GPPGPPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTV--PEI- 642

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T        EYE   V  +++G          + TK++V    P  + GG  
Sbjct: 643 LNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGGG 702

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y ++ R   ++TW    E V   E  R+  R 
Sbjct: 703 ----SRSELIITWESIPEELQNGEDF-GYIVMLRPVGSTTW--TKERVPSVESSRFIYRN 755

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E      ++P S +E KV   N+ G G  S+ S  Y+   D+P  AP           ++
Sbjct: 756 EN-----IIPLSPFEIKVGVYNKEGEGPLSTASIIYSG-EDEPQLAPRGTSVQSFSASEM 809

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GN  I    I      T Y  
Sbjct: 810 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGN--ITTKNITGLKANTVYFA 867

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 868 SVRAYNTAGTGPSS 881


>gi|410964135|ref|XP_003988611.1| PREDICTED: contactin-1 isoform 2 [Felis catus]
          Length = 1007

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 268/793 (33%), Positives = 401/793 (50%), Gaps = 41/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S    ++L+C A   P P Y+W        R+    ID  SD
Sbjct: 29  GPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW--------RMNNGDIDLTSD 78

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 79  -RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 138 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDIYALMGQNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N+R   +    I 
Sbjct: 256 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 316 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------ 369

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 370 ------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D GIY+C A N  
Sbjct: 420 RVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNR 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   + G L++   P+     P    I    N  ++C+A  +  LD+ +IW+ NG  I  
Sbjct: 480 GRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDF 538

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 539 NKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 598

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 599 LRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 653

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 654 AARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELT 713

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 714 ITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVK 772

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 773 VKAFNNKGDGPYS 785



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 134/595 (22%), Positives = 234/595 (39%), Gaps = 74/595 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 334 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 385

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 386 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 445

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N  + R ++    V+T     
Sbjct: 446 NSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENN-RGRANNTGTLVITDPTRI 496

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    F+W  +G +I        ++       NG 
Sbjct: 497 ILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGE 556

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 557 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 614

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             ++    ++  +T     I + D  + +T    I+G +            EYE  V   
Sbjct: 615 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRV--- 670

Query: 763 VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPIT---------- 809
              ++T T  I  G P +P     ++    +  +  +D   G  + R +T          
Sbjct: 671 ---VATNTLGI--GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREY 723

Query: 810 HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A 
Sbjct: 724 HYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKAF 776

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N  G G P S +   N+  D P +AP+ +G       ++S+ W+ +  +   +  I Y  
Sbjct: 777 NNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWDHVVEKIVESYQIRYWA 835

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              K+        T +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 836 AHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 884


>gi|426224675|ref|XP_004006494.1| PREDICTED: contactin-1 isoform 3 [Ovis aries]
          Length = 1007

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 267/793 (33%), Positives = 400/793 (50%), Gaps = 41/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S    ++L+C A   P P Y+W        R+    ID  SD
Sbjct: 29  GPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW--------RMNNGDIDLTSD 78

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 79  -RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 138 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDVYALMGQNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N+R   +    I 
Sbjct: 256 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 316 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------ 369

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 370 ------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF+W K    + +  R  I+E+G+L I+ ++R D G+Y+C   N  
Sbjct: 420 RVIIECKPKAAPKPKFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCFVENNK 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L++   P+     P    I    N  ++C+A  +  LD+ ++W+ NG  I  
Sbjct: 480 GKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDF 538

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 539 NKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 598

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ +V  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 599 LRIEDVRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 653

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 654 AARAVDLIPWMEYEFRVVATNTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELT 713

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 714 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVK 772

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 773 VKAFNNKGDGPYS 785



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 134/596 (22%), Positives = 226/596 (37%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    R          L + +V  E+ G Y C A N 
Sbjct: 334 GSDLYWPCVATGKPIPTIRWLKNGYSYHRGE--------LRLYDVTFENAGMYQCIAENT 385

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   + W +  E L+
Sbjct: 386 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLV 445

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C  +N  K + +S    V+T     
Sbjct: 446 NSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVENN-KGKANSTGTLVITDPTRI 496

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 497 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 556

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 557 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDVRATSVALTWS 614

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 615 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 673

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 674 NTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSRE 722

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 723 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKA 775

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   ++  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 776 FNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHWEHVVEKIVESYQIRYW 834

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+          +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 835 ASHDKEAAAHRVQVASQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 884


>gi|197097634|ref|NP_001124558.1| contactin-6 precursor [Pongo abelii]
 gi|55731108|emb|CAH92269.1| hypothetical protein [Pongo abelii]
 gi|55731947|emb|CAH92682.1| hypothetical protein [Pongo abelii]
          Length = 1028

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 262/805 (32%), Positives = 395/805 (49%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P D++F  DLSK    +++ L+C A GYP+P Y W +           
Sbjct: 20  DGLLSRPIFTQEPHDIIFPLDLSK----SEVILNCAANGYPSPHYRWKQN--------GT 67

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L I+ P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 68  DIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 127

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 128 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 187

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 188 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 245

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 246 KLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 305

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 306 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE---- 361

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 362 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 417

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
           +++   GG++ I C P A P+    WK+    +    R  + E+G+L I  ++R D+G Y
Sbjct: 418 KSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSY 477

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 478 TCIATNQFGTTKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 536

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 537 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADII 593

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V  PPG P  V+V ++  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 594 VRAPPGPPEDVKVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVAT 648

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 649 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIN 708

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S
Sbjct: 709 GGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNES 767

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 768 IIPLSPFEVKVGVYNNEGEGSLSTV 792



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 293/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 262 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 314 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 366 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 426 DIVIECKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 479 CIATNQFGTTKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +  + SG Y CT         +   +IV 
Sbjct: 536 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 596 APPGPPEDVKVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 653 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 766 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGTGPSS 891


>gi|296487720|tpg|DAA29833.1| TPA: contactin-1 precursor [Bos taurus]
          Length = 1018

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 269/807 (33%), Positives = 405/807 (50%), Gaps = 42/807 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S    ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    ID  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDIDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDVY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N+R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 373 RGELRLYD------------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKP F+W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D G+Y+C   N  G   S G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 477 SDGGVYTCFVENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + ++W+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 536 LTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSAS 595

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
             ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +    
Sbjct: 596 ADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-- 653

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
               +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  AP
Sbjct: 654 ---TDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAP 710

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           S +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V 
Sbjct: 711 SDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVH 769

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  +    T ++VKV+A N+ G GP S
Sbjct: 770 KDETMRPSTAFQVKVKAFNNKGDGPYS 796



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 135/596 (22%), Positives = 227/596 (38%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    R          L + +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGYSYHRGE--------LRLYDVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P  T+ W +  E L+
Sbjct: 397 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C  +N  K + +S    V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVENN-KGKANSTGTLVITDPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 508 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 567

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 568 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 625

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 626 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 685 NTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSRE 733

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 734 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKA 786

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   ++  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 787 FNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHWEHVVEKIVESYQIRYW 845

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+          +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 846 ASHDKEAAAHRVQVASQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 895


>gi|350584500|ref|XP_003355665.2| PREDICTED: contactin-1-like isoform 2 [Sus scrofa]
          Length = 1018

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 270/807 (33%), Positives = 405/807 (50%), Gaps = 42/807 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S    ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    ID  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDIDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDIY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 373 RGELRLYD------------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF+W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D G Y+C   N  G   S G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 477 NDGGTYTCFVENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + ++W+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 536 LTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSAS 595

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
             ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +    
Sbjct: 596 ADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYNIQTKTILSDDWKDAK-- 653

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
               +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  AP
Sbjct: 654 ---TDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAP 710

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           S +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V 
Sbjct: 711 SDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVH 769

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  +    T ++VKV+A N+ G GP S
Sbjct: 770 KDETMRPSTAFQVKVKAFNNKGDGPYS 796



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 135/596 (22%), Positives = 221/596 (37%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    R          L + +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGYSYHRGE--------LRLYDVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   + W +  E L+
Sbjct: 397 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D   Y C  +N  K + +S    V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEINNIT-RNDGGTYTCFVENN-KGKANSTGTLVITDPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 508 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 567

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +   A    L     
Sbjct: 568 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRG 627

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
           +     +    I T     I + D  + +T    I+G +            EYE   V  
Sbjct: 628 SDNHSPISKYNIQTKT---ILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 685 NTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSRE 733

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 734 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKA 786

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   ++  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 787 FNNKGDG-PYSLTAVIHSAQDAPSEAPTEVGVKVLSSSEISVHWEHVVEKIVESYQIRYW 845

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+        T +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 846 AAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 895


>gi|296225710|ref|XP_002758613.1| PREDICTED: contactin-6 [Callithrix jacchus]
          Length = 1029

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 262/803 (32%), Positives = 391/803 (48%), Gaps = 38/803 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D +   P F ++P DV+F L      ++I L+C A G+P+P Y W +            I
Sbjct: 20  DGLLSRPIFTQEPHDVIFPLGLSK--SEIILNCAANGHPSPHYRWKQN--------GTDI 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D      + L GG+L I+ P   +D G Y C A+N  G+I+S   +L F +I +F  K  
Sbjct: 70  DFTMSYHYRLEGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  
Sbjct: 130 STVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS 189

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRL 419
           D GNY+C + +K +     GP  PL     ++ + + +       FPE  +A     V+L
Sbjct: 190 DVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGKIMSYXXKIEVRFPETIQAAKDSSVKL 247

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R    
Sbjct: 248 ECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNL 307

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   +   A P +   + + ++     L W C+A G P+  Y+W +NGE LN E      
Sbjct: 308 AKGQLIFYAPPEWEQKIQNTYLSIYDSLLWECKANGKPNPWYTWLKNGERLNPE------ 361

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
            +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++  +
Sbjct: 362 -ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKNS 419

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           +   GG++ I C P A P+    WK+    +    R  + E+G+L I  V+R  +G Y+C
Sbjct: 420 FVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNVTRSHAGSYTC 479

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W  N
Sbjct: 480 IATNQFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFMWFFN 538

Query: 719 GVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
           G  I   DL +       I G   G L I N     +G+Y C VK+T+  +S    +IV 
Sbjct: 539 GDVI---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVR 595

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG P  V+V ++  T++ + W  G  N  PI  + I  RT ++  W       +    
Sbjct: 596 GPPGPPEDVKVEDISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVP 650

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
           +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GG
Sbjct: 651 EILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSALLRTKASVPVVAPVNINGG 710

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG   +L I+WE +P E QN     Y + +R    T +  E +    +    V R  S  
Sbjct: 711 GGSRSELVITWESIPEELQNGEGFGYIVMFRPVGLTAWTKEKVASVESSRF-VYRNESII 769

Query: 956 YYTEYEVKVQAINDVGPGPESEV 978
             + +EVKV   ND G G  S V
Sbjct: 770 PLSPFEVKVGVYNDEGEGSLSTV 792



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 146/647 (22%), Positives = 240/647 (37%), Gaps = 70/647 (10%)

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 417
            +Q D G Y C + S +   GRN     L  +    ++Q K  N +   +       D +
Sbjct: 287 FQQEDEGFYEC-IASNLR--GRNLAKGQLIFYAPPEWEQ-KIQNTYLSIY-------DSL 335

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
             EC A G P P Y W + G  L      +  N  L I  + V D G Y C A N    +
Sbjct: 336 LWECKANGKPNPWYTWLKNGERLNPEERIQIENGTLIITMLNVSDSGVYQCAAENKYQII 395

Query: 478 ESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
            ++  + + A  P+F+     K+   Q   D+   C+    P    SW R  E L     
Sbjct: 396 YANAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKRGTETLR---- 451

Query: 535 PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
             + +  + ++D  L I Y         Y C A NQ  T  ++  L ++  +      P 
Sbjct: 452 --QSKRIFLLEDGSLKI-YNVTRSHAGSYTCIATNQFGTAKNTGSL-IVKERTVITVPPS 507

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GNLLIS 646
           + +   GE  ++ + C     P  +  F+W  +G++I        FE       G+L+I 
Sbjct: 508 KMDVTVGE--SIVLPCQVSHDPSIEVVFMWFFNGDVIDLKKGVAHFERIGGESVGDLMIR 565

Query: 647 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
            +  + SG Y CT         +   +IV   P   E +  +   +    L  R      
Sbjct: 566 NIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVKVEDISSTTSQLSWRPGPDNN 625

Query: 707 ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG 764
             + +  I T     +G   +  +  P I ++G     T    +   EYE   V  +++G
Sbjct: 626 SPIQIFTIQTRTPFSVGWQAVATV--PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIG 682

Query: 765 ---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP---IT 809
                     + TK +V V  P  + GG       ++   I W    +   NG     I 
Sbjct: 683 IGEPSKPSALLRTKASVPVVAPVNINGGGG----SRSELVITWESIPEELQNGEGFGYIV 738

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            ++ +  T W        E V   E  R+  R E+     ++P S +E KV   N+ G G
Sbjct: 739 MFRPVGLTAWTK------EKVASVESSRFVYRNES-----IIPLSPFEVKVGVYNDEGEG 787

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
             S+ +  Y+   D+P  AP           ++ +SW  +   +     + Y++ +   +
Sbjct: 788 SLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDD 846

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
             E     ++  GN  I    I      T Y   V+A N  G GP S
Sbjct: 847 SKESMIGKIRVSGN--ITTKNITGLKANTIYFASVRAYNTAGTGPSS 891


>gi|348513041|ref|XP_003444051.1| PREDICTED: contactin-1a-like [Oreochromis niloticus]
          Length = 1095

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 260/803 (32%), Positives = 399/803 (49%), Gaps = 59/803 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    IT++C A   P  +Y+W K D+++  L A        
Sbjct: 115 GPVFEEQPVDTIY--PEESPEAKITMNCRARANPPATYKW-KLDHMEIDLNAE------G 165

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
             ++L+GGNL+I++P +    G Y C A+N +G++IS    + FG++  F+ + R+    
Sbjct: 166 SHYSLAGGNLVISNPDKTVHVGKYSCLATNTYGTVISREASVQFGYLDLFSSEERSSVYV 225

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGN 365
            +  G  + C PP +YP  +++ W  + FP F+  DKR FVS   G LY S ++  D GN
Sbjct: 226 KEGQGAVLLCAPPPHYPAELSFRWILNEFPTFIIPDKRRFVSQITGNLYISKVDSSDRGN 285

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-AGDKVRLECVAF 424
           YSC   S          + PL+  P +     K+P +    FP+     G  V LEC A 
Sbjct: 286 YSCIASSPSISKSVFSNYIPLE--PQTERPIRKYPADLRVKFPDTTALVGQNVTLECFAL 343

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +    LP N         L + NV+ ED G Y C A N +     +  +S
Sbjct: 344 GNPVPEVRWKKIDGHLPSNHEVRMTGTQLHLYNVQFEDGGTYKCEAVNSKGKDYHTARVS 403

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++A P +   ++    D ++D T +C+A G P     W +NGE +          DR  +
Sbjct: 404 VEAFPEWVEHISSTEKDLRSDYTMSCKASGKPKPHIRWLKNGEPV----------DRNEM 453

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           + + LT        D  MYQC A+N+    Y++A+LRV    P+F++ P++    A + G
Sbjct: 454 RFSSLTFD------DSGMYQCIAENRHGVIYANAELRVFACAPTFERNPVK-RVLAAKNG 506

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKP F W KD  ++ +  R  I+E+G+L I  V+R D G Y+C A N  
Sbjct: 507 RVVIECRPKAAPKPAFSWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRYTCFAENDR 566

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G   S G L+V+   +     P    +    N  ++C+A  ++ LD+ +IW+ +G  I  
Sbjct: 567 GKANSTGDLLVMDS-TKITLAPSNTDVKVGENTSMQCAASHDQSLDITFIWSLDGRVIDL 625

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           + D    E        G L I N     AG+Y C  ++ V  I+    ++V GPPG PGG
Sbjct: 626 HKDSQHYERTTNGSSNGELLIKNVQLKHAGQYTCTAQTPVDNITASAHLVVRGPPGAPGG 685

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRK 842
           V+++E    S  +QW+ GA N  PI+ Y I  +  + N  W N +   +  E     G  
Sbjct: 686 VRIIEKTDKSVKLQWSRGADNHSPISKYTIQYKDQFSNDVWKNATTFPVNVE-----GNA 740

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E +    L+PW+ YEF+VIA N LG G+PS+PSP   T    P  APS +GGGGG   +L
Sbjct: 741 EMTTVVDLIPWTDYEFRVIATNTLGTGDPSNPSPIIKTLEAVPVVAPSDVGGGGGASREL 800

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 956
           +I+W P+  +    PN  Y + ++ +++ E++           +AV    +  Y      
Sbjct: 801 TITWTPVKPKYYYGPNFGYIVAFKPQDEQEWKR----------VAVADPQARRYVHKASD 850

Query: 957 ---YTEYEVKVQAINDVGPGPES 976
               TE++VKV+A N  G GP S
Sbjct: 851 IPPLTEFQVKVKAFNVQGEGPYS 873



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 134/591 (22%), Positives = 223/591 (37%), Gaps = 80/591 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           + C A G P P   W + G P+ RN         +   ++  +D G Y C A N    + 
Sbjct: 427 MSCKASGKPKPHIRWLKNGEPVDRNE--------MRFSSLTFDDSGMYQCIAENRHGVIY 478

Query: 479 SSVTISIQA-EPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           ++  + + A  P F   P+          +   C     P   +SW ++ ELL++ T   
Sbjct: 479 ANAELRVFACAPTFERNPVKRVLAAKNGRVVIECRPKAAPKPAFSWSKDTELLSNST--- 535

Query: 537 EDQDRYFI-QDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVL-----TLKPSF 589
               R FI +D  L I  LN  R D   Y C A+N      S+  L V+     TL PS 
Sbjct: 536 ----RVFIWEDGSLEI--LNVTRADEGRYTCFAENDRGKANSTGDLLVMDSTKITLAPS- 588

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
                 ++   GE  ++    + + +    F+W  DG +I      + +E       NG 
Sbjct: 589 -----NTDVKVGENTSMQCAASHDQSLDITFIWSLDGRVIDLHKDSQHYERTTNGSSNGE 643

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI  V    +G Y+CTA        +   L+V   P     +  +I     ++++L+ S
Sbjct: 644 LLIKNVQLKHAGQYTCTAQTPVDNITASAHLVVRGPPGAPGGV--RIIEKTDKSVKLQWS 701

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
              +    ++        +  N       T  +N++G     T        +YE   +  
Sbjct: 702 RGADNHSPISKYTIQYKDQFSNDVWKNATTFPVNVEGNAEMTTVVDLIPWTDYEFRVIAT 761

Query: 761 STVGK---------ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG--RPIT 809
           +T+G          I T   V V  P  + GG           TI WT         P  
Sbjct: 762 NTLGTGDPSNPSPIIKTLEAVPVVAPSDVGGGGGA----SRELTITWTPVKPKYYYGPNF 817

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y +  +      W  V+  V   +  RY  +        + P + ++ KV A N  G G
Sbjct: 818 GYIVAFKPQDEQEWKRVA--VADPQARRYVHKASD-----IPPLTEFQVKVKAFNVQGEG 870

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            P S +    +  D P +AP+ +          ++SW PL     +     Y++ + +  
Sbjct: 871 -PYSLTAIIYSAQDAPAEAPAVVEARALSAKAATVSWMPLSYSNLDG----YQVKYWESG 925

Query: 930 DTEFQSETLKEYGNVGIAV----VRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +E Q+ET      +G++      ++ +   YTEY ++V+  N  G GP S
Sbjct: 926 QSEGQAET------IGVSSRENHTKLENLRPYTEYIIEVRGYNSAGYGPPS 970


>gi|149714162|ref|XP_001487999.1| PREDICTED: contactin-1 isoform 2 [Equus caballus]
          Length = 1008

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 268/793 (33%), Positives = 400/793 (50%), Gaps = 41/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S    ++L+C A   P P Y+W        R+    +D  SD
Sbjct: 30  GPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD 79

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 80  -RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 138

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 139 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 198

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 199 YSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDVYALMGQNVTLECFAL 256

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R   +    I 
Sbjct: 257 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHHGRIY 316

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 317 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYHKGELRLYD------ 370

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 371 ------VTFENA----GMYQCIAENTHGVIYANAELKILALAPTFEMNPMKKKILAAKGG 420

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D GIY+C A N  
Sbjct: 421 RVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNR 480

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L++   P+     P    I    N  ++C+A  +  LD+ +IW+ NG  I  
Sbjct: 481 GKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDF 539

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 540 NKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 599

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 600 LRIEDIRATSVALTWSRGSDNHSPISKYSIQTKTILSDDWKDAK-----TDPPIIEGNME 654

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 655 AARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELT 714

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 715 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVK 773

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 774 VKAFNNKGDGPYS 786



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 148/668 (22%), Positives = 246/668 (36%), Gaps = 96/668 (14%)

Query: 347 VSYDGA-LYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP----HSNFQQLKFPN 401
           +S  GA L    ++  D G Y C  ++       +G  + ++ FP    H N  ++    
Sbjct: 278 ISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHHGRIY-VQAFPEWVEHINDTEVDI-- 334

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVE 461
                       G  +   CVA G P+P+  W + G    +          L + +V  E
Sbjct: 335 ------------GSDLYWPCVATGKPIPTIRWLKNGYSYHKGE--------LRLYDVTFE 374

Query: 462 DQGEYICRASNDRSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDV 518
           + G Y C A N    + ++  + I A  P F + P+  K +  +   +   C+    P  
Sbjct: 375 NAGMYQCIAENTHGVIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKP 434

Query: 519 TYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            +SW +  E L+NS  +          +D  L I  +    D  +Y C A+N      S+
Sbjct: 435 KFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANST 486

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
             L V+T        P+ ++   GE   +    + + A    F+W  +G +I        
Sbjct: 487 GTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIH 545

Query: 638 FE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 690
           ++       NG LLI       +G Y+CTA  +     +   L+V   P     L  +  
Sbjct: 546 YQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDI 605

Query: 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 750
            A    L     +     +    I T     I + D  + +T    I+G +         
Sbjct: 606 RATSVALTWSRGSDNHSPISKYSIQTKT---ILSDDWKDAKTDPPIIEGNMEAARAVDLI 662

Query: 751 DAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
              EYE   V  +T+G         KI T        P  + GG           TI W 
Sbjct: 663 PWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA 718

Query: 800 DGATNGRPIT---HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVL 850
                  P++   HY      I+A   ++   W  V+  V   +  RY  + E      +
Sbjct: 719 -------PLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----M 764

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P + ++ KV A N  G G P S +   N+  D P +AP+ +G       ++S+ WE + 
Sbjct: 765 RPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPAEVGVKVLSSSEISVHWEHVV 823

Query: 911 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            +   +  I Y     K+        T +EY        R+ +    T+Y V+V+A N  
Sbjct: 824 EKIVESYQIRYWSAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVRACNSA 877

Query: 971 GPGPESEV 978
           G GP S++
Sbjct: 878 GCGPPSDM 885


>gi|355746564|gb|EHH51178.1| Neural recognition molecule NB-3 [Macaca fascicularis]
          Length = 1029

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 263/805 (32%), Positives = 393/805 (48%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    +++ L C A GYP+P Y W +           
Sbjct: 20  DGLLSRPIFTQEPHDVIFPLDLSK----SEVILKCAANGYPSPHYRWKQN--------GT 67

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L I+ P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 68  DIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 127

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 128 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 187

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 188 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 245

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  G PLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 246 KLECFALGNPVPDISWRRLDGRPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGR 305

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 306 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNGERLNPE---- 361

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 362 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 417

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
            ++   GG++ I C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y
Sbjct: 418 NSFVQVGGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSDAGSY 477

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W 
Sbjct: 478 TCIATNQFGTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWF 536

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 537 FNGDII---DLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADII 593

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  V+V E+  T++ + W  G  N  PI  + I  +T ++  W       +  
Sbjct: 594 VRGPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGW-----QAVAT 648

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  + 
Sbjct: 649 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVN 708

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +    V R  S
Sbjct: 709 GGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRF-VYRNES 767

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   N+ G G  S V
Sbjct: 768 IIPLSPFEVKVGVYNNEGEGSLSTV 792



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 186/794 (23%), Positives = 293/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 262 RRLDGRPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  +C A G P P Y W + G  L      +
Sbjct: 314 FYAPPEWEQ-KIQNTYLSIY-------DNLLWKCKASGKPNPWYTWLKNGERLNPEERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 366 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 426 DIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 479 CIATNQFGTAKNAGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G+II        FE       G+L+I  +  + SG Y CT         +   +IV 
Sbjct: 536 FFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 596 GPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGWQAVATV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V    P  + GG  
Sbjct: 653 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVASVESSRFVYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 766 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGTGPSS 891


>gi|432891359|ref|XP_004075560.1| PREDICTED: contactin-5-like [Oryzias latipes]
          Length = 1054

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 262/795 (32%), Positives = 380/795 (47%), Gaps = 34/795 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P D++F L   S    + L C A G P P+Y W+        +    +D  +D
Sbjct: 58  GPVFIQEPDDIIFSLG--SGERKVMLHCEARGNPPPTYSWY--------INGTRVDSDTD 107

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++   G+LII +  ++ D G Y CK+ N FGSI+S    L F ++G F+ K R     
Sbjct: 108 YRYSFIDGDLIITNASEITDFGKYQCKSENSFGSILSRDALLQFAYLGAFSTKSRGAVSV 167

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S D G LY S ++  D G+Y
Sbjct: 168 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQDTGNLYISKVQPSDVGSY 227

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP +   A   G  VRLEC A 
Sbjct: 228 ICLVKNPVTNARVLSPPTPLTLKTDGVMGEYEPKIEVHFPSSVLAA--KGVTVRLECFAL 285

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P+ A       +L IPN++ +D G Y C+A N R        + 
Sbjct: 286 GNPVPTITWRKINGNIPKRARLRKSQAVLEIPNIQQDDSGVYECKAENPRGGTAFKGHLQ 345

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P +   + D  MD+   L W C+A   P  TY W RNG       LPL  Q R  I
Sbjct: 346 VYTLPQWVRMINDTQMDSGEKLQWECKAISRPRPTYRWLRNG-------LPLASQGRVEI 398

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            +  L+I  +  + D  MYQC A+N+    YS+A+L++L   P F   P+     A  G 
Sbjct: 399 MNGELSIHKVQ-QTDSGMYQCVAENKYGAIYSNAELKILASAPVFFHNPV--RVIATLGK 455

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           +  + C P A+PKP+  WK++   I    R  +  N  L I   SR D G Y C A N  
Sbjct: 456 DAFLECKPRASPKPRITWKREDRRIQPNKRIILLRNNTLKIVNSSRADEGNYVCRAENQL 515

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR-IG 723
           G  E    L V          P K+ +    ++ L C A  +  LDVA+ W  N    I 
Sbjct: 516 GSAELTAVLWVKEAMRVVLS-PSKVEVTVGESVVLSCKATHDTSLDVAFQWFFNQKPIIF 574

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             D N  E          L I +     AG+Y C  +++   + T+  ++V GPPG PG 
Sbjct: 575 QQDGNHFEYIQTQSSTVDLMIRSILLRHAGKYGCRAQTSADSVFTEAELLVRGPPGPPGV 634

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V V E+   +AT+ WT G  N  PI+ Y + AR+ ++  W       +  + D  TG  E
Sbjct: 635 VIVEEITDHTATLSWTRGLDNHSPISTYNLQARSPFSLGW-----QTVKTDPDPVTGDME 689

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           +++   L PW  YEF+V+A N +G G+PS+PS +  T    P  APS + GG G+  +L 
Sbjct: 690 SAMAVELNPWVEYEFRVVASNAIGTGDPSAPSRRVRTKEAVPSVAPSNVSGGDGRRHELV 749

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           ISWEP+  E QN     Y + +R  N T    E +    +      R  +    T +EVK
Sbjct: 750 ISWEPVSEEFQNGEGFGYIVAFR-ANGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVK 808

Query: 964 VQAINDVGPGPESEV 978
           V   N+ G GP S+V
Sbjct: 809 VGVYNNKGDGPFSQV 823


>gi|326928156|ref|XP_003210247.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6-like [Meleagris
           gallopavo]
          Length = 1057

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 256/801 (31%), Positives = 398/801 (49%), Gaps = 40/801 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P D+ + +   S+  ++ L+C A GYP P+Y W +            ID    
Sbjct: 50  GPIFIQEPYDITYSMG--SVNPEVLLNCTAKGYPLPNYRWKQN--------GTDIDLTMS 99

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
             + L GG+L IN+PR+ +D G+Y C A+N FG+I+S   +L F ++  F +K    +  
Sbjct: 100 YHYRLVGGSLAINNPRKKQDIGTYQCLATNSFGTILSRKAKLQFAYLENFEMKTRSTVSV 159

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP ++ G+++ W  +    +V+ED+R FVS + G LY + +E  D GNY
Sbjct: 160 REGQGVVLLCGPPPHHGGLSFAWTFNKNTLYVQEDRRRFVSQETGNLYIAKVEPWDVGNY 219

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAF 424
           +C V +  +     GP  PL +   S+    ++       FPE   A  G  V+LEC A 
Sbjct: 220 TCVVTNSKAGQSVQGPPTPLTL--RSDGVMGEYEPKIEARFPETTYAAKGSSVKLECFAL 277

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKV----EDQGEYICRASNDRSALES 479
           G PVP+ +W R  GS L +    +    +L IP+V+     ED+G Y C A N R    +
Sbjct: 278 GNPVPNISWRRSDGSSLTKKIERDKNKGVLEIPDVQQXVQQEDEGSYECIAENIRGRNIA 337

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + + A P +   + +  +     L W C+A   P  +YSW +NG+       PL  +
Sbjct: 338 RGQLFVYALPEWDKKIENAFLSLYDSLFWECKAKXKPTPSYSWLKNGQ-------PLMSE 390

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           +R  +++  L I  +N   D  +YQC A+N+  T Y+SA+LRV+   P F K P++  + 
Sbjct: 391 ERIQVENGTLIIPMVN-MSDSGLYQCVAENKYDTIYASAELRVIAAAPDFSKNPVKKTSV 449

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
              GG VTI C P A+P+    W+K   ++    R  + E+G+L +  +++ D+G+Y+C 
Sbjct: 450 VQVGGEVTIACRPSASPRAAIDWRKGPEVLRLNKRALLLEDGSLRLYNITKSDAGVYTCI 509

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
           ATN  G+  + G LIV         +PP  + +    ++ L C    +  + V + W+ N
Sbjct: 510 ATNQFGVARNSGNLIVKE--RTVITIPPSNMDVTVGESIVLPCQVSHDPSIAVVFTWSFN 567

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G +I    +++  E       G L+ I N      G+Y C+V++T+   ST   VIV GP
Sbjct: 568 GNKIDFKREMHHFERIGGESVGDLM-IRNIQLHHTGKYVCMVQTTLDSQSTAVDVIVRGP 626

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V+V  +  T+A + W  G  N  P+  Y I  RT ++  W  VS        + 
Sbjct: 627 PGPPENVRVEHISSTTAVLSWKSGIDNNSPVQIYSIQTRTPFSVGWQAVS-----TVPEV 681

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            +GR   +    L PW  YEF+V+A N +G GEPS PS    T A  P  AP+ + GGGG
Sbjct: 682 LSGRTHKATLVDLSPWVEYEFRVVASNSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGG 741

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WEP+P E QN     Y + +R    T +    +         V R  S    
Sbjct: 742 SRSELVITWEPVPEELQNGEGFGYIVMFRPLGSTTWTKAAVAPV-EASKYVYRNESITPL 800

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + +EVKV   N+ G G  S V
Sbjct: 801 SPFEVKVGVYNNEGEGTLSSV 821



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 189/776 (24%), Positives = 288/776 (37%), Gaps = 114/776 (14%)

Query: 256 GNLIINDPRQVE--DRGSYHCKASNKFGSIISESVQ--------LAFGFIGEFNLK---R 302
           GNL I    +VE  D G+Y C  +N   S   +SVQ         + G +GE+  K   R
Sbjct: 204 GNLYI---AKVEPWDVGNYTCVVTN---SKAGQSVQGPPTPLTLRSDGVMGEYEPKIEAR 257

Query: 303 APEIGNQNWGKA--MFCDPPTNYPGVNYYWARD---YFPNFVEEDKRVFVSYDGALYF-- 355
            PE      G +  + C    N P  N  W R         +E DK       G L    
Sbjct: 258 FPETTYAAKGSSVKLECFALGN-PVPNISWRRSDGSSLTKKIERDKN-----KGVLEIPD 311

Query: 356 --SALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413
               ++Q D G+Y C  ++     GRN     L V+    + + K  N F   +      
Sbjct: 312 VQQXVQQEDEGSYECIAENI---RGRNIARGQLFVYALPEWDK-KIENAFLSLY------ 361

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
            D +  EC A   P PSY+W + G PL      +  N  L IP V + D G Y C A N 
Sbjct: 362 -DSLFWECKAKXKPTPSYSWLKNGQPLMSEERIQVENGTLIIPMVNMSDSGLYQCVAENK 420

Query: 474 RSALESSVTIS-IQAEPNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELL- 529
              + +S  +  I A P+F+     K    Q   ++T  C     P     W +  E+L 
Sbjct: 421 YDTIYASAELRVIAAAPDFSKNPVKKTSVVQVGGEVTIACRPSASPRAAIDWRKGPEVLR 480

Query: 530 -NSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQL-----RV 582
            N   L LED           ++R  N  + D  +Y C A NQ     +S  L      V
Sbjct: 481 LNKRALLLEDG----------SLRLYNITKSDAGVYTCIATNQFGVARNSGNLIVKERTV 530

Query: 583 LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN 640
           +T+ PS        +   GE  ++ + C     P     F W  +GN I        FE 
Sbjct: 531 ITIPPS------NMDVTVGE--SIVLPCQVSHDPSIAVVFTWSFNGNKIDFKREMHHFER 582

Query: 641 ------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                 G+L+I  +    +G Y C          +   +IV   P   E +  +   +  
Sbjct: 583 IGGESVGDLMIRNIQLHHTGKYVCMVQTTLDSQSTAVDVIVRGPPGPPENVRVEHISSTT 642

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  +        + +  I T     +G   ++ +  P + + G   + T    +   E
Sbjct: 643 AVLSWKSGIDNNSPVQIYSIQTRTPFSVGWQAVSTV--PEV-LSGRTHKATLVDLSPWVE 699

Query: 755 YE--CVVKSTVGK---------ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  ++VG          + TK  V    P  + GG       ++   I W    +
Sbjct: 700 YEFRVVASNSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGG----SRSELVITWEPVPE 755

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
              NG     Y ++ R   ++TW   +  V   E  +Y  R E+     + P S +E KV
Sbjct: 756 ELQNGEGF-GYIVMFRPLGSTTWTKAA--VAPVEASKYVYRNES-----ITPLSPFEVKV 807

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
              N  G G  SS S  Y+   D+P  AP+          ++ +SW+P+   +     + 
Sbjct: 808 GVYNNEGEGTLSSVSIVYSG-EDEPQIAPAGTSALSISAAEVEVSWQPVAWNRHTGRVLG 866

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           Y++ +   +  E  +  ++  GN  I    I      T Y   V+A N  G GP S
Sbjct: 867 YEVLYWTDDPKESTAGKVRVNGN--ITAQNITGLKANTVYFATVRAYNTAGMGPSS 920


>gi|27805871|ref|NP_776705.1| contactin-1 precursor [Bos taurus]
 gi|55976304|sp|Q28106.1|CNTN1_BOVIN RecName: Full=Contactin-1; AltName: Full=Neural cell surface
           protein F3; Flags: Precursor
 gi|1060861|dbj|BAA06861.1| F3/F11/Contactin [Bos taurus]
          Length = 1018

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 269/807 (33%), Positives = 405/807 (50%), Gaps = 42/807 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S    ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    ID  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDIDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDVY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N+R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 373 RGELRLYD------------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKP F+W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D G+Y+C   N  G   S G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 477 SDGGVYTCFVENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + ++W+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 536 LTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSAS 595

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
             ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +    
Sbjct: 596 ADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-- 653

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
               +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  AP
Sbjct: 654 ---TDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAP 710

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           S +GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V 
Sbjct: 711 SDVGGGGGSNRELTITWAPLSREYHYFNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVH 769

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  +    T ++VKV+A N+ G GP S
Sbjct: 770 KDETMRPSTAFQVKVKAFNNKGDGPYS 796



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 132/589 (22%), Positives = 225/589 (38%), Gaps = 62/589 (10%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    R          L + +V  E+ G Y C A N 
Sbjct: 345 GSDLYWPCVATGKPIPTIRWLKNGYSYHRGE--------LRLYDVTFENAGMYQCIAENT 396

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P  T+ W +  E L+
Sbjct: 397 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLV 456

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C  +N  K + +S    V+T     
Sbjct: 457 NSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVENN-KGKANSTGTLVITDPTRI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 508 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 567

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 568 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 625

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 626 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 684

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
           +T+G         KI T        P  + GG           TI W   +       ++
Sbjct: 685 NTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWAPLSREYHYFNNF 740

Query: 812 K-IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
             I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A N  G G
Sbjct: 741 GYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKAFNNKGDG 793

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            P S +   ++  D P +AP+ +G       ++S+ WE +  +   +  I Y     K+ 
Sbjct: 794 -PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHWEHVVEKIVESYQIRYWASHDKEA 852

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                    +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 853 AAHRVQVASQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 895


>gi|410951589|ref|XP_003982477.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6-like [Felis catus]
          Length = 1028

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 267/799 (33%), Positives = 393/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P F ++P D+ F  DLSK    ++I L+C A GYP+PSY W +            ID   
Sbjct: 26  PVFTQEPQDIXFPLDLSK----SEIILNCAATGYPSPSYRWKQN--------GTDIDFTM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L  GNL I+ PR  +D G Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 74  SYHYRLDEGNLAISSPRTDQDIGMYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C V +K +     GP  PL     ++    ++       FPE  +A     V+LEC A
Sbjct: 194 YTCFVTNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  G+PLP    +     IL IPN + ED+G Y C A N R    +   
Sbjct: 252 LGNPVPDISWRRLDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++     L W C+A G P+  Y+W +NGE L  E       +R 
Sbjct: 312 LIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPNPWYTWLKNGERLTPE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K PL+  +    
Sbjct: 365 QIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKTSVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG++TI C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y+CTATN
Sbjct: 424 GGDITIECKPAAFPRAAISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCTATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G+ ++ G L+V    +     P K+ +    ++ L C    +  ++V +IW+ NG  I
Sbjct: 484 QFGIAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVIFIWSFNGDVI 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +       I G   G L I N     +G+Y C VK+T+  +S    +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G+ N  PI  + + ART ++  W       +    +   
Sbjct: 600 PPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILN 654

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS  S    T A  P  AP+ I GGGG  
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSR 714

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y I  R    T +  E +    +    V R  S    + 
Sbjct: 715 SELVITWESIPEELQNGEEFGYIIMLRPVGSTTWTKERVPSVESSRF-VYRNESITPLSP 773

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S V
Sbjct: 774 FEVKVGVYNNEGEGSLSTV 792



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 184/794 (23%), Positives = 290/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFVTNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 261

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R   +  P  V+  K         L     +Q D G Y C   +     GRN     L 
Sbjct: 262 RRLDGNPLPGKVKYSKS-----QAILEIPNFQQEDEGFYECIAGNL---RGRNLAKGQLI 313

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 314 FYAPPEWEQ-KIQNTYLSIY-------DSLFWECKASGKPNPWYTWLKNGERLTPEERIQ 365

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTI-PLTDKHMDN-QA 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+  PL    +     
Sbjct: 366 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKTSVVQVGG 425

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+T  C+    P    SW R  E        L    R F+ ++     Y     D   Y 
Sbjct: 426 DITIECKPAAFPRAAISWKRGME-------SLRQSKRVFLSEDGSLKIYNVTRSDAGSYT 478

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ     ++  L V+  +      P + +   GE  ++ + C     P  +  F+W
Sbjct: 479 CTATNQFGIAKNTGSL-VVKERTVITIPPSKMDVTVGE--SIVLPCQVSHDPSIEVIFIW 535

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +  + SG Y CT         +   +IV 
Sbjct: 536 SFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVR 595

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R  +     + +  +       +G   ++ +  P I 
Sbjct: 596 GPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTV--PEI- 652

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 653 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGG 712

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 713 ----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTTW--TKERVPSVESSRFVYRN 765

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     + P S +E KV   N  G G  S+ S  Y+   D+P  AP           ++
Sbjct: 766 ES-----ITPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQLAPRGTSVQSFSASEM 819

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 820 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 877

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 878 SVRAYNTAGAGPSS 891


>gi|301760361|ref|XP_002915991.1| PREDICTED: contactin-6-like [Ailuropoda melanoleuca]
          Length = 1028

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 265/799 (33%), Positives = 395/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P F ++P DV+F  DLS+    ++I L+C A GYP+P Y W +            ID   
Sbjct: 26  PIFTQEPQDVIFPLDLSE----SEIILNCAASGYPSPHYRWKQN--------GTDIDFTM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEI 306
              + L GGNL I+ P   +D G Y C A+N  G+I+S   +L F +I +F  K R+   
Sbjct: 74  SYHYRLDGGNLAISSPHTDQDIGMYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSAVS 133

Query: 307 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  + Y W  +  P +V+ED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHFGDLFYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C + +K +     GP  PL     ++    ++       FPE  +A     ++LEC A
Sbjct: 194 YTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  G+PLP    +     IL IPN + ED+G Y C A N R    +   
Sbjct: 252 LGNPVPDISWRRLDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQ 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E       +R 
Sbjct: 312 LIFYAPPEWEQKIQNTYLSIYDNLFWECKASGKPNPLYTWLKNGERLNPE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++  +    
Sbjct: 365 QIENGTLVITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG++TI C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y+C ATN
Sbjct: 424 GGDITIECKPNAFPRATISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G+ ++ G L+V    +     P K+ +    ++ L C    +  ++V +IW+ NG  I
Sbjct: 484 QFGVAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI 542

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +       I G   G L I N     +G+Y C VK+T+  +S    +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 599

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G+ N  PI  + I ART ++  W       +    +  +
Sbjct: 600 PPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTIQARTPFSVGW-----QAVSTVPEILS 654

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS  S    T A  P  AP+ I GGGG  
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSR 714

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y I  R    T +  E +    +    V R  S    + 
Sbjct: 715 SELVITWESIPEELQNGEEFGYIIMLRPVGSTAWTKERVPSVESSRF-VYRNESITPLSP 773

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S V
Sbjct: 774 FEVKVGVYNNEGEGSLSTV 792



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 179/768 (23%), Positives = 283/768 (36%), Gaps = 85/768 (11%)

Query: 248 DKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISES-----VQLAFGFIGEFNLK 301
           ++RF +   GNL I    +  D G+Y C  +NK      +      VQ   G +GE+  K
Sbjct: 170 NRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPK 228

Query: 302 ---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYWAR---DYFPNFVEEDKRVFVSYDGAL 353
              R PE     ++    + C    N P  +  W R   +  P  V+  K         L
Sbjct: 229 IEVRFPETIQAAKDSSIKLECFALGN-PVPDISWRRLDGNPLPGKVKYSKS-----QAIL 282

Query: 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413
                +Q D G Y C   +     GRN     L  +    ++Q K  N +   +      
Sbjct: 283 EIPNFQQEDEGFYECIAGNL---RGRNLAKGQLIFYAPPEWEQ-KIQNTYLSIY------ 332

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
            D +  EC A G P P Y W + G  L      +  N  L I  + V D G Y C A N 
Sbjct: 333 -DNLFWECKASGKPNPLYTWLKNGERLNPEERIQIENGTLVITMLNVSDSGVYQCAAENK 391

Query: 474 RSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLN 530
              + ++  + + A  P+F+     K+   Q   D+T  C+    P  T SW R  E   
Sbjct: 392 YQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRATISWKRGME--- 448

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
                L    R F+ ++     Y     D   Y C A NQ     ++  L V+  +    
Sbjct: 449 ----SLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATNQFGVAKNTGSL-VVKERTVIT 503

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GN 642
             P + +   GE  ++ + C     P  +  F+W  +G++I        FE       G+
Sbjct: 504 IPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVAHFERIGGESVGD 561

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L+I  +  + SG Y CT         +   +IV   P   E +  +   +    L  R  
Sbjct: 562 LMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPG 621

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
           +     + +  I       +G   ++ +  P I + G     T    +   EYE   V  
Sbjct: 622 SDNNSPIQIFTIQARTPFSVGWQAVSTV--PEI-LSGKTYNATVVGLSPWVEYEFRVVAG 678

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
           +++G          + TK +V V  P  + GG       ++   I W    +   NG   
Sbjct: 679 NSIGIGEPSKASELLRTKASVPVVAPTNINGGGG----SRSELVITWESIPEELQNGEEF 734

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y I+ R   ++ W    E V   E  R+  R E+     + P S +E KV   N  G 
Sbjct: 735 -GYIIMLRPVGSTAW--TKERVPSVESSRFVYRNES-----ITPLSPFEVKVGVYNNEGE 786

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           G  S+ S  Y+   D+P QAP           ++ +SW+ +   +     + Y++ +   
Sbjct: 787 GSLSTVSIVYSG-EDEPQQAPRGTSVQSFSASEMEVSWKAIAWNRNTGRVLGYEVLYWTD 845

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  E     ++  GNV      I      T Y   V+A N  G GP S
Sbjct: 846 DSKESMIGKIRVSGNV--TTKNITGLKANTIYFASVRAYNTAGAGPSS 891


>gi|358418126|ref|XP_605070.5| PREDICTED: contactin-3, partial [Bos taurus]
          Length = 912

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 259/797 (32%), Positives = 391/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDLSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L  GNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EYRYKLIRGNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNGEALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLN-VTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P+    WKK   I+    R     +G L I  V++ D+GIY+C A N
Sbjct: 424 GSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LL   + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFRKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+
Sbjct: 602 ESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    + R  S   ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYIFRNESILPFSLYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 162/658 (24%), Positives = 251/658 (38%), Gaps = 78/658 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q D+G+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FSGVLEIPNFQQEDSGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEL----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDSLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q  +++   C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KK 445

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           GE++  E     ++   F+ D  L I  +  + D  +Y C A+NQ      +  L V+T 
Sbjct: 446 GEVIVQE-----NERTSFLNDGGLKIVNVT-KADAGIYTCIAENQFGKANGTTHL-VVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE---- 639
                  P   +   GE  +V + C  +  P     F W  +G +         FE    
Sbjct: 499 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGG 556

Query: 640 --NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
             +G+L+I  +    SG Y C          S   LIV   P   E +  K+        
Sbjct: 557 SSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESV--KVDEITDTTA 614

Query: 698 QLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
           QL     T+    V AY +       +G      +  P + IDG     T        EY
Sbjct: 615 QLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--PEV-IDGKTHTATVVELNPWVEY 671

Query: 756 E--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DG 801
           E   V  + +G         K+ T+  V    P  + GG       ++   I W    + 
Sbjct: 672 EFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEE 727

Query: 802 ATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
             NG     +  ++ +  TNW      +   V   +  RY  R E+     ++P+S YE 
Sbjct: 728 LQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYIFRNES-----ILPFSLYEV 776

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   
Sbjct: 777 KVGVYNNKGEG-PFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSNGHL 835

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           + Y++ +      E  S  LK  GNV  A +R + S   YYT     V+A N  G GP
Sbjct: 836 LGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNLAYYT----AVRAFNSAGTGP 889


>gi|327266142|ref|XP_003217865.1| PREDICTED: contactin-6-like [Anolis carolinensis]
          Length = 1036

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 260/798 (32%), Positives = 388/798 (48%), Gaps = 36/798 (4%)

Query: 187 PRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P GP FI++P DV + ++      ++ L+C   G P+P Y W +            ID  
Sbjct: 21  PHGPIFIQEPFDVTYSVNSED--PEVILNCTGRGRPSPFYRWKRN--------GTDIDLT 70

Query: 247 SDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEI 306
               + L GG+L IN+P + +D G+Y C  +N FG+I+S   +L F ++  F  K    +
Sbjct: 71  MSYHYRLDGGSLAINNPHKKQDIGTYQCLVTNSFGTILSRKAKLQFAYLENFETKARSTV 130

Query: 307 G-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAG 364
              +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D G
Sbjct: 131 SVREGQGVVLLCGPPPHHGDLSYAWIFNDNPLYVQEDSRRFVSQETGNLYIAKVEPSDVG 190

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECV 422
           NY+C V +  +     GP  PL +   S+    ++       FPEA +   G  ++LEC 
Sbjct: 191 NYTCVVINTEAKQSVQGPPTPLVL--RSDGVMGEYEPKIEVRFPEAIQVAKGSSIKLECF 248

Query: 423 AFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G PVPS +W R  G+PL R      F  IL IPN + ED+  Y C A N R    +  
Sbjct: 249 ALGNPVPSISWRRIDGNPLSRK--ISTFKGILEIPNFQQEDEATYECIAGNVRGRNAARG 306

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            + I A P +   L + H+       W C+A G P  +Y W +NG+       PL  ++R
Sbjct: 307 QLFIYALPEWNKGLENAHVSLYDTFMWECKATGKPMPSYYWLKNGQ-------PLSPEER 359

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             I++  LTI  LN   D  +YQC A+N+  + YS+A+LRV+   P F K  ++  +   
Sbjct: 360 IQIENGTLTITMLNIS-DSGLYQCVAENKYGSIYSNAELRVIASAPDFSKNLMKKISVVH 418

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 661
            GG +TI C P+A+PK    WKK    +    R  I ++G+L I  V++ D+GIY+C A 
Sbjct: 419 MGGEITIECKPDASPKAAITWKKGTESLKQSKRICILDDGSLKIYNVTKSDAGIYTCIAM 478

Query: 662 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 721
           N  G+  + G LIV    +     P  + +    ++ L C    +  ++VA+IW+ NG  
Sbjct: 479 NQFGVARNSGNLIVKER-TIINTPPSNMDVTVGESIVLPCQVSKDPSVEVAFIWSFNGDV 537

Query: 722 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
           I     +   E       G L+ I N     +G+Y C V++ +  +S    +IV G PG 
Sbjct: 538 IDFKRKITHFERAGGESVGDLM-IRNIQLNHSGKYTCTVQTAMDILSETAEIIVRGTPGP 596

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           P  V +  V  T+A + W  G  N  PI  Y I  RT ++  W  VS        +   G
Sbjct: 597 PKDVSIEHVSSTTAVLNWRSGTDNNSPIQIYTIQTRTPFSVGWQAVS-----TVPEVING 651

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
           R   +    L PW  YEF+V+AGN +G GEPS+PS    T A  P  AP+ + GGGG   
Sbjct: 652 RTHTATVVDLNPWVEYEFRVVAGNSVGIGEPSAPSELLRTKASIPTVAPANVSGGGGSRS 711

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           +L I+WEP+P E QN     Y I +R    T + ++ +         + R  S      +
Sbjct: 712 ELVITWEPIPEELQNGDGFGYIIMFRPLGSTSW-TKAVAASVEASKYIYRNDSITPLFPF 770

Query: 961 EVKVQAINDVGPGPESEV 978
           EVKV   N  G G  S +
Sbjct: 771 EVKVGVFNHEGVGTLSPI 788



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 153/670 (22%), Positives = 251/670 (37%), Gaps = 88/670 (13%)

Query: 344 RVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP 400
           R   ++ G L     +Q D   Y C   NV+      GRN     L ++    + +    
Sbjct: 269 RKISTFKGILEIPNFQQEDEATYECIAGNVR------GRNAARGQLFIYALPEWNK-GLE 321

Query: 401 NNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKV 460
           N     +       D    EC A G P+PSY W + G PL      +  N  LTI  + +
Sbjct: 322 NAHVSLY-------DTFMWECKATGKPMPSYYWLKNGQPLSPEERIQIENGTLTITMLNI 374

Query: 461 EDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDK----HMDNQADLTWTCEAFGV 515
            D G Y C A N   ++ S+  + + A  P+F+  L  K    HM    ++T  C+    
Sbjct: 375 SDSGLYQCVAENKYGSIYSNAELRVIASAPDFSKNLMKKISVVHMG--GEITIECKPDAS 432

Query: 516 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 575
           P    +W +  E        L+   R  I D+     Y   + D  +Y C A NQ     
Sbjct: 433 PKAAITWKKGTE-------SLKQSKRICILDDGSLKIYNVTKSDAGIYTCIAMNQFGVAR 485

Query: 576 SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGG 633
           +S  L ++  +      P   +   GE  ++ + C     P  +  F+W  +G++I    
Sbjct: 486 NSGNL-IVKERTIINTPPSNMDVTVGE--SIVLPCQVSKDPSVEVAFIWSFNGDVIDFKR 542

Query: 634 RRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 687
           +   FE       G+L+I  +  + SG Y+CT      +      +IV   P      PP
Sbjct: 543 KITHFERAGGESVGDLMIRNIQLNHSGKYTCTVQTAMDILSETAEIIVRGTPG-----PP 597

Query: 688 KITIAAHRN-----LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
           K     H +     L  R        + +  I T     +G   ++ +  P + I+G   
Sbjct: 598 KDVSIEHVSSTTAVLNWRSGTDNNSPIQIYTIQTRTPFSVGWQAVSTV--PEV-INGRTH 654

Query: 743 EITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHK 791
             T        EYE   V  ++VG          + TK ++    P  + GG       +
Sbjct: 655 TATVVDLNPWVEYEFRVVAGNSVGIGEPSAPSELLRTKASIPTVAPANVSGGGG----SR 710

Query: 792 TSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 848
           +   I W    +   NG     Y I+ R   +++W       +  E  +Y  R ++    
Sbjct: 711 SELVITWEPIPEELQNGDGF-GYIIMFRPLGSTSWTKAVAASV--EASKYIYRNDS---- 763

Query: 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQY--NTPADKPYQAPSRIGGGGGKIGDLSISW 906
            + P   +E KV   N  G G   + SP Y   +  D+P  AP+          ++ +SW
Sbjct: 764 -ITPLFPFEVKVGVFNHEGVG---TLSPIYIVYSGEDEPQIAPTGASVQSISASEMEVSW 819

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
            P+   +     + Y++ +   +  +  +  +K  GN  I V  I +    T Y   V+A
Sbjct: 820 NPVAWNRHTGRVLGYEVLYWTDDSRDSTTSKVKVSGN--ITVRNITNLKPNTLYFASVRA 877

Query: 967 INDVGPGPES 976
            N  G GP S
Sbjct: 878 FNTAGTGPSS 887


>gi|440901336|gb|ELR52306.1| Contactin-2, partial [Bos grunniens mutus]
          Length = 1018

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 284/804 (35%), Positives = 393/804 (48%), Gaps = 51/804 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP  ++F   + S    +TL+C A   P  +Y W K +  + +L     +P S 
Sbjct: 14  GPVFEEQPLGLLF--PEESTEEKVTLACRARASPPATYRW-KMNGTEMKL-----EPGS- 64

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 65  -RQQLVGGNLVIMNPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 123

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 124 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 183

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 184 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 234

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 235 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVGFEDEGTYECEAENTKG 291

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D+  D  +DL W C A G P     W RNGE       P
Sbjct: 292 RDTVQGRIIVQAQPEWLRVISDREADIGSDLHWACAAAGKPRPAVRWLRNGE-------P 344

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 345 LTSQARVEVMAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVR 403

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG V I C P AAPK   +W K   I+ +  R  +  +G L+I  VSR D G 
Sbjct: 404 RLIPAARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNVSRSDEGK 463

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ ++W
Sbjct: 464 YTCFAENFMGKANSTGTLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFVW 522

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +      +  ++    G L I NA     G+Y C  ++ V   S + TV+V
Sbjct: 523 TLDDFPIDFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDSASKEATVLV 582

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  TS  + W+ G  N  PI  Y + ART  +  W  V  +    E
Sbjct: 583 RGPPGAPGGVVVRDISDTSVQLSWSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPTNIE 642

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + G
Sbjct: 643 -----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSG 697

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L+++W P+ RE Q+     Y + +R++  T +Q+  +    +    V    S 
Sbjct: 698 GGGAPGELTVTWTPMSREYQHGGGFGYLVSFRRQGGTSWQTARVPG-ADAQYFVYSNDSI 756

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
             YT +EVK+++ N  G GPES V
Sbjct: 757 RPYTPFEVKIRSYNRRGDGPESLV 780


>gi|403270430|ref|XP_003927185.1| PREDICTED: contactin-6 [Saimiri boliviensis boliviensis]
          Length = 1029

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 265/805 (32%), Positives = 394/805 (48%), Gaps = 42/805 (5%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLSK    ++I L+C A G+P+P Y W +           
Sbjct: 20  DGLLSRPVFTQEPHDVIFPLDLSK----SEIILNCAANGHPSPHYRWKQN--------GT 67

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L I+ P   +  G+Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 68  DIDFTVSYHYRLEGGSLAISSPHTDQVIGTYQCLATNLLGTILSRKAKLQFAYIEDFETK 127

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 128 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 187

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 188 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 245

Query: 418 RLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 246 KLECFALGNPVPDISWRRWDGSPLPGKVKYSKTQAILEIPNFQQEDEGFYECIASNLRGR 305

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++     L W C+A G P+  Y+W +NGE LN E    
Sbjct: 306 NLAKGQLIFYAPPEWEQKIQNTYLSIYDSLLWECKASGKPNPWYTWLKNGERLNPE---- 361

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ 
Sbjct: 362 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKK 417

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
            ++   GG++ I C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y
Sbjct: 418 NSFVQVGGDIVIECKPNAFPRAAISWKRGMETLRQSKRIFLLEDGSLKIYNVTRSDAGSY 477

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G  ++ G LIV    +     P K+ +    ++ L C    +  ++V +IW 
Sbjct: 478 TCMATNQFGTAKNTGSLIVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWF 536

Query: 717 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            NG  I   DL +       I G   G L I N     +G+Y C V++T+  +S    +I
Sbjct: 537 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADII 593

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG P  V+V ++  T++ + W  G  N  PI  + I  RT ++  W       +  
Sbjct: 594 VRGPPGPPEDVKVEDISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVAT 648

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
             +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I 
Sbjct: 649 VPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPININ 708

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+WE +P E QN     Y + +R    T +  E +    +    V R  S
Sbjct: 709 GGGGSRSELVITWESIPEELQNGEGFGYIVMFRPVGSTTWTKEKVASAESSRF-VYRNES 767

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
               + +EVKV   ND G G  S V
Sbjct: 768 IIPLSPFEVKVGVYNDEGEGSLSTV 792



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 187/798 (23%), Positives = 298/798 (37%), Gaps = 106/798 (13%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 154 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 202

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTN-YPGVNYY 329
                +      VQ   G +GE+  K   R PE     ++    + C    N  P +++ 
Sbjct: 203 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWR 262

Query: 330 -WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
            W     P  V+  K         L     +Q D G Y C + S +   GRN     L  
Sbjct: 263 RWDGSPLPGKVKYSKT-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLIF 314

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN 448
           +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      + 
Sbjct: 315 YAPPEWEQ-KIQNTYLSIY-------DSLLWECKASGKPNPWYTWLKNGERLNPEERIQI 366

Query: 449 FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--AD 505
            N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   D
Sbjct: 367 ENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGGD 426

Query: 506 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 565
           +   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y C
Sbjct: 427 IVIECKPNAFPRAAISWKRGMETLR------QSKRIFLLEDGSLKI-YNVTRSDAGSYTC 479

Query: 566 RAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK- 619
            A NQ  T  ++  L      V+T+ PS      + +   GE  ++ + C     P  + 
Sbjct: 480 MATNQFGTAKNTGSLIVKERTVITIPPS------KMDVTVGE--SIVLPCQVSHDPSIEV 531

Query: 620 -FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
            F+W  +G++I        FE       G+L+I  +  + SG Y CT         +   
Sbjct: 532 VFIWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVAD 591

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 732
           +IV   P   E +  +   +    L  R        + +  I T     +G   +  +  
Sbjct: 592 IIVRGPPGPPEDVKVEDISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV-- 649

Query: 733 PNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLP 781
           P I ++G     T    +   EYE   V  +++G          + TK +V V  P  + 
Sbjct: 650 PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPININ 708

Query: 782 GGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 838
           GG       ++   I W    +   NG     Y ++ R   ++TW    E V   E  R+
Sbjct: 709 GGGG----SRSELVITWESIPEELQNGEGF-GYIVMFRPVGSTTW--TKEKVASAESSRF 761

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
             R E+     ++P S +E KV   N+ G G  S+ +  Y+   D+P  AP         
Sbjct: 762 VYRNES-----IIPLSPFEVKVGVYNDEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFS 815

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
             ++ +SW  +   +     + Y++ +   +  E     ++  GN  I    I      T
Sbjct: 816 ASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVTGN--ITTKNITGLKANT 873

Query: 959 EYEVKVQAINDVGPGPES 976
            Y   V+A N  G GP S
Sbjct: 874 IYFASVRAYNTAGTGPSS 891


>gi|359078211|ref|XP_002697016.2| PREDICTED: contactin-3 [Bos taurus]
          Length = 1028

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 259/797 (32%), Positives = 391/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDLSM 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L  GNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 74  EYRYKLIRGNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 312 LTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNGEALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 365 QIENGALTISNLN-VTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P+    WKK   I+    R     +G L I  V++ D+GIY+C A N
Sbjct: 424 GSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LL   + W  NG   
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALA 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 543 DFRKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+
Sbjct: 602 ESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GK 656

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    + R  S   ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYIFRNESILPFSLYE 775

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 776 VKVGVYNNKGEGPFSPV 792



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 162/658 (24%), Positives = 251/658 (38%), Gaps = 78/658 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q D+G+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 278 FSGVLEIPNFQQEDSGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEL----- 329

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 330 ---AVEDSLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 386

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q  +++   C+    P    SW + 
Sbjct: 387 IAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KK 445

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           GE++  E     ++   F+ D  L I  +  + D  +Y C A+NQ      +  L V+T 
Sbjct: 446 GEVIVQE-----NERTSFLNDGGLKIVNVT-KADAGIYTCIAENQFGKANGTTHL-VVTE 498

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE---- 639
                  P   +   GE  +V + C  +  P     F W  +G +         FE    
Sbjct: 499 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGG 556

Query: 640 --NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
             +G+L+I  +    SG Y C          S   LIV   P   E +  K+        
Sbjct: 557 SSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESV--KVDEITDTTA 614

Query: 698 QLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
           QL     T+    V AY +       +G      +  P + IDG     T        EY
Sbjct: 615 QLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--PEV-IDGKTHTATVVELNPWVEY 671

Query: 756 E--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DG 801
           E   V  + +G         K+ T+  V    P  + GG       ++   I W    + 
Sbjct: 672 EFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEE 727

Query: 802 ATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
             NG     +  ++ +  TNW      +   V   +  RY  R E+     ++P+S YE 
Sbjct: 728 LQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYIFRNES-----ILPFSLYEV 776

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   
Sbjct: 777 KVGVYNNKGEG-PFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSNGHL 835

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           + Y++ +      E  S  LK  GNV  A +R + S   YYT     V+A N  G GP
Sbjct: 836 LGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNLAYYT----AVRAFNSAGTGP 889


>gi|224066635|ref|XP_002186834.1| PREDICTED: contactin-6 [Taeniopygia guttata]
          Length = 1022

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 261/797 (32%), Positives = 388/797 (48%), Gaps = 36/797 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP FI++P D+ + +   S   +I L+C A GYP P Y W +            ID    
Sbjct: 8   GPIFIQEPYDITYSMG--SANPEILLNCTAKGYPLPYYRWKQN--------GTDIDLTMS 57

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
             + L GG+L IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  + R+P   
Sbjct: 58  YHYRLVGGSLAINNPHKNQDIGTYQCLATNSFGTILSRKAKLQFAYLENFETRPRSPVSV 117

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGNY 366
            +  G  + C  P  +PG++Y W  +     + ED R FVS   G LY + +E  D GNY
Sbjct: 118 REGQGVVLLCGTPPRFPGLSYTWLFNNNTLDLREDSRRFVSQATGNLYLAKVEPWDVGNY 177

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAF 424
           +C V S  ++  R     P  +    +    ++       FPE   A  G  VRLEC A 
Sbjct: 178 TCAVSS--AEARRRVWGTPTALTLRGDGVMGEYEPKIEVRFPETTYAAKGSSVRLECFAL 235

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVPS +W R  GS L +         +L IPNV+ ED+G Y C A N R    +   +
Sbjct: 236 GNPVPSISWKRSDGSSLAKKIQHNRAGGVLEIPNVEQEDEGSYECMAGNTRGINIARGQL 295

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            + A P +   + +  +     L W C+A G P  +YSW +NG+       PL  ++R  
Sbjct: 296 LVYAPPEWDKKIQNAFLSLYDSLFWECKARGKPSPSYSWLKNGQ-------PLMSEERIQ 348

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I++  L I  LN   D  +YQC A+N+  T Y++A+LRV+   P F + P++  +    G
Sbjct: 349 IENGTLLIPMLNLS-DSGLYQCVAENKYDTIYANAELRVIAAAPDFSRNPVKKLSVVQVG 407

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G VTI C P A+P+    W+K   ++    R    E+G+L IS +S+ D+G+Y+C ATN 
Sbjct: 408 GQVTIGCKPSASPRAVVSWRKGLEVLRQNKRVVFLEDGSLRISNISKVDAGVYTCVATNQ 467

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
            G   + G LIV         +PP  T A    ++ L C    +  LDV + W+ NG RI
Sbjct: 468 FGTARNSGNLIVKE--RTVITIPPSDTDATVGESIVLPCQVSHDPSLDVLFSWSFNGQRI 525

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
             ++ ++  E       G L+ I N     +G+Y C+V++++   S    +IV GPPG P
Sbjct: 526 DLSIGIHHFERIGRESAGDLM-IRNIQLHHSGKYVCMVQTSLDSQSAAADIIVRGPPGPP 584

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V  V  T+A + W  G  N  P+  Y +  RT ++  W       +    +   GR
Sbjct: 585 EDVKVEHVSSTTAGLSWKPGVDNNSPVQIYSVQTRTPFSVGW-----QAVATAPEVINGR 639

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N +G GEPS PS    T A  P  AP+ I GGGG   +
Sbjct: 640 THKATVVDLSPWVEYEFRVVASNSVGIGEPSRPSALLRTKAAVPVVAPTNISGGGGSRSE 699

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+WEP+  E QN     Y + +R    T +    +    +    V R  S    + +E
Sbjct: 700 LVITWEPVSEELQNGEGFGYIVMFRPLGSTTWTKAVVASVESSKY-VYRNESITPLSPFE 758

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G G  S +
Sbjct: 759 VKVGVYNNEGEGTLSSI 775



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 198/842 (23%), Positives = 316/842 (37%), Gaps = 116/842 (13%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLV 239
           +EN +  PR P  +++   VV             L      +P  SY W   +       
Sbjct: 104 LENFETRPRSPVSVREGQGVVL------------LCGTPPRFPGLSYTWLFNN------- 144

Query: 240 ANLIDPLSDKR--FTLSGGNLIINDPRQVE--DRGSYHCKASNK------FGSIISESVQ 289
            N +D   D R   + + GNL +    +VE  D G+Y C  S+       +G+  + +++
Sbjct: 145 -NTLDLREDSRRFVSQATGNLYL---AKVEPWDVGNYTCAVSSAEARRRVWGTPTALTLR 200

Query: 290 LAFGFIGEFNLK---RAPEIGNQNWGKA--MFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344
              G +GE+  K   R PE      G +  + C    N P  +  W R    +  ++ + 
Sbjct: 201 -GDGVMGEYEPKIEVRFPETTYAAKGSSVRLECFALGN-PVPSISWKRSDGSSLAKKIQH 258

Query: 345 VFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFP 404
                 G L    +EQ D G+Y C   +     G N     L V+    + + K  N F 
Sbjct: 259 NRAG--GVLEIPNVEQEDEGSYECMAGNT---RGINIARGQLLVYAPPEWDK-KIQNAFL 312

Query: 405 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQG 464
             +       D +  EC A G P PSY+W + G PL      +  N  L IP + + D G
Sbjct: 313 SLY-------DSLFWECKARGKPSPSYSWLKNGQPLMSEERIQIENGTLLIPMLNLSDSG 365

Query: 465 EYICRASNDRSALESSVTIS-IQAEPNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYS 521
            Y C A N    + ++  +  I A P+F+     K    Q    +T  C+    P    S
Sbjct: 366 LYQCVAENKYDTIYANAELRVIAAAPDFSRNPVKKLSVVQVGGQVTIGCKPSASPRAVVS 425

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQL- 580
           W +  E+L       +++   F++D  L I  ++ + D  +Y C A NQ  T  +S  L 
Sbjct: 426 WRKGLEVLR------QNKRVVFLEDGSLRISNIS-KVDAGVYTCVATNQFGTARNSGNLI 478

Query: 581 ----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGR 634
                V+T+ PS        +T A  G ++ + C     P     F W  +G  I     
Sbjct: 479 VKERTVITIPPS--------DTDATVGESIVLPCQVSHDPSLDVLFSWSFNGQRIDLSIG 530

Query: 635 RKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
              FE       G+L+I  +    SG Y C          +   +IV   P   E +  +
Sbjct: 531 IHHFERIGRESAGDLMIRNIQLHHSGKYVCMVQTSLDSQSAAADIIVRGPPGPPEDVKVE 590

Query: 689 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 748
              +    L  +        + +  + T     +G      + T    I+G   + T   
Sbjct: 591 HVSSTTAGLSWKPGVDNNSPVQIYSVQTRTPFSVG---WQAVATAPEVINGRTHKATVVD 647

Query: 749 FADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797
            +   EYE   V  ++VG          + TK  V V  P  + GG       ++   I 
Sbjct: 648 LSPWVEYEFRVVASNSVGIGEPSRPSALLRTKAAVPVVAPTNISGGGG----SRSELVIT 703

Query: 798 W---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
           W   ++   NG     Y ++ R   ++TW      V   E  +Y  R E+     + P S
Sbjct: 704 WEPVSEELQNGEGF-GYIVMFRPLGSTTWTKAV--VASVESSKYVYRNES-----ITPLS 755

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            +E KV   N  G G  SS S  Y+   D+P  AP+           + +SW P+P  + 
Sbjct: 756 PFEVKVGVYNNEGEGTLSSISIIYSG-EDEPQMAPAGASALSVSAAAVEVSWLPIPWNRH 814

Query: 915 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
               + Y++ +   +  E  +  ++  GNV      I      T Y   V+A N  G GP
Sbjct: 815 TGRVLGYEVLYWIDDPKESTAGKVRVSGNV--TAKNITGLRANTVYFATVRAYNTAGTGP 872

Query: 975 ES 976
            S
Sbjct: 873 SS 874


>gi|345787930|ref|XP_542227.3| PREDICTED: contactin-5 [Canis lupus familiaris]
          Length = 1100

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 252/800 (31%), Positives = 384/800 (48%), Gaps = 32/800 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P D++F          + L+C A   P P+Y W +            I
Sbjct: 93  ESVDYGPVFVQEPDDIIFPTDSEE--KKVALNCEAHSNPVPNYRWLRN--------GTEI 142

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D  SD R++L  G  II++P + +D G Y C A N  GSI+S    L F ++G F+ +  
Sbjct: 143 DLESDYRYSLIDGTFIISNPGEAKDSGHYQCLAVNTLGSILSREAILQFAYLGNFSGRTR 202

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  
Sbjct: 203 SAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVVEDSRRFISQETGNLYISKVQTS 262

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP T   A   G  V++
Sbjct: 263 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKM 320

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R     
Sbjct: 321 ECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGLYECRAENSRGKNSF 380

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q
Sbjct: 381 RGQLQVYTYPHWVEKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNG-------VPLLPQ 433

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           +R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+    
Sbjct: 434 NRIEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTII 492

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             +G  V I C P+ +PKP   WKK    +    R     +G+L I   S+ D G Y C 
Sbjct: 493 VTKGQEVVIECKPQGSPKPTISWKKGDKAVRENKRIANLPDGSLRILNASKSDEGKYVCQ 552

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
             NV G  E    + V   P+  E  P +  +    ++ L C A  +  LD+ + WT  G
Sbjct: 553 GENVFGSSEIIASVSVKE-PTKIELTPKRTELTVGESIVLNCKAIHDASLDITFYWTLKG 611

Query: 720 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I    +    E+         L I N     AG Y C V++T   +S +  ++V GPP
Sbjct: 612 QPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPP 671

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 838
           G PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W       +    +  
Sbjct: 672 GPPGVVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTIPEII 726

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
           TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+
Sbjct: 727 TGDLESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGR 786

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
             +L I+WEP+  E QN     Y + +R  N T    E +         + R  S    T
Sbjct: 787 RHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLT 845

Query: 959 EYEVKVQAINDVGPGPESEV 978
            +EVKV   N+ G GP S++
Sbjct: 846 PFEVKVGVYNNKGDGPFSQI 865



 Score = 40.0 bits (92), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 11/122 (9%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            Y F V A N  GYG PSS   +  T    P QAPS +     +   LS+ WEP+      
Sbjct: 946  YHFTVRAYNGAGYGPPSS-EVRATTKKSPPSQAPSNLRWEQ-QGSQLSLGWEPVRPLTNE 1003

Query: 916  APNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            +  + YK+F+R++  +  Q  ET K       A+V +P    Y    ++V+A ++ G G 
Sbjct: 1004 SDVMGYKVFYRQEGHSNSQVIETQKPQ-----AIVPLPDAGVYV---IEVRAYSEGGDGT 1055

Query: 975  ES 976
             S
Sbjct: 1056 AS 1057


>gi|440905205|gb|ELR55618.1| Contactin-1, partial [Bos grunniens mutus]
          Length = 987

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 265/793 (33%), Positives = 399/793 (50%), Gaps = 41/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S    ++L+C A   P P Y+W        R+    ID  SD
Sbjct: 9   GPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW--------RMNNGDIDLTSD 58

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 59  -RYSMVGGNLVINNPDKQQDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRV 117

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 118 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 177

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 178 YSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDVYALMGQNVTLECFAL 235

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N+R   +    I 
Sbjct: 236 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIY 295

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 296 VQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------ 349

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 350 ------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGG 399

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKP F+W K    + +  R  I+E+G+L I+ ++R D G+Y+C   N  
Sbjct: 400 RVIIECKPKAAPKPTFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCFVENNK 459

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L++   P+     P    I    N  ++C+A  +  LD+ ++W+ NG  I  
Sbjct: 460 GKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDF 518

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 519 NKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 578

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 579 LRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 633

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 634 AARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELT 693

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  +    T ++VK
Sbjct: 694 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVK 752

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 753 VKAFNNKGDGPYS 765



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 135/596 (22%), Positives = 227/596 (38%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    R          L + +V  E+ G Y C A N 
Sbjct: 314 GSDLYWPCVATGKPIPTIRWLKNGYSYHRGE--------LRLYDVTFENAGMYQCIAENT 365

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P  T+ W +  E L+
Sbjct: 366 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLV 425

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C  +N  K + +S    V+T     
Sbjct: 426 NSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVENN-KGKANSTGTLVITDPTRI 476

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    FVW  +G +I        ++       NG 
Sbjct: 477 ILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGE 536

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 537 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 594

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             ++    ++  +T     I + D  + +T    I+G +            EYE   V  
Sbjct: 595 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 653

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 654 NTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSRE 702

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A
Sbjct: 703 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET-----MRPSTAFQVKVKA 755

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   ++  D P +AP+ +G       ++S+ WE +  +   +  I Y 
Sbjct: 756 FNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHWEHVVEKIVESYQIRYW 814

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+          +EY        R+ +    T+Y V+V+A N  G GP S++
Sbjct: 815 ASHDKEAAAHRVQVASQEYS------ARLENLLPDTQYFVEVRACNSAGCGPPSDM 864


>gi|281346449|gb|EFB22033.1| hypothetical protein PANDA_004018 [Ailuropoda melanoleuca]
          Length = 979

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 264/799 (33%), Positives = 394/799 (49%), Gaps = 42/799 (5%)

Query: 190 PYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           P F ++P DV+F  DLS+    ++I L+C A GYP+P Y W +            ID   
Sbjct: 9   PIFTQEPQDVIFPLDLSE----SEIILNCAASGYPSPHYRWKQN--------GTDIDFTM 56

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + L GGNL I+ P   +D G Y C A+N  G+I+S   +L F +I +F  K    + 
Sbjct: 57  SYHYRLDGGNLAISSPHTDQDIGMYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSAVS 116

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP ++  + Y W  +  P +V+ED R FVS + G LY + +E  D GN
Sbjct: 117 VREGQGVVLLCGPPPHFGDLFYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGN 176

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVA 423
           Y+C + +K +     GP  PL     ++    ++       FPE  +A     ++LEC A
Sbjct: 177 YTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFA 234

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  +W R  G+PLP    +     IL IPN + ED+G Y C A N R    +   
Sbjct: 235 LGNPVPDISWRRLDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQ 294

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E       +R 
Sbjct: 295 LIFYAPPEWEQKIQNTYLSIYDNLFWECKASGKPNPLYTWLKNGERLNPE-------ERI 347

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++  +    
Sbjct: 348 QIENGTLVITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQV 406

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG++TI C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y+C ATN
Sbjct: 407 GGDITIECKPNAFPRATISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATN 466

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G+ ++ G L+V    +     P K+ +    ++ L C    +  ++V +IW+ NG  I
Sbjct: 467 QFGVAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI 525

Query: 723 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              DL +       I G   G L I N     +G+Y C VK+T+  +S    +IV GPPG
Sbjct: 526 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 582

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
            P  V+V  +  T++ + W  G+ N  PI  + I ART ++  W       +    +  +
Sbjct: 583 PPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTIQARTPFSVGW-----QAVSTVPEILS 637

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G+   +    L PW  YEF+V+AGN +G GEPS  S    T A  P  AP+ I GGGG  
Sbjct: 638 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSR 697

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WE +P E QN     Y I  R    T +  E +    +    V R  S    + 
Sbjct: 698 SELVITWESIPEELQNGEEFGYIIMLRPVGSTAWTKERVPSVESSRF-VYRNESITPLSP 756

Query: 960 YEVKVQAINDVGPGPESEV 978
           +EVKV   N+ G G  S V
Sbjct: 757 FEVKVGVYNNEGEGSLSTV 775



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 179/768 (23%), Positives = 283/768 (36%), Gaps = 85/768 (11%)

Query: 248 DKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISES-----VQLAFGFIGEFNLK 301
           ++RF +   GNL I    +  D G+Y C  +NK      +      VQ   G +GE+  K
Sbjct: 153 NRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPK 211

Query: 302 ---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYWAR---DYFPNFVEEDKRVFVSYDGAL 353
              R PE     ++    + C    N P  +  W R   +  P  V+  K         L
Sbjct: 212 IEVRFPETIQAAKDSSIKLECFALGN-PVPDISWRRLDGNPLPGKVKYSKS-----QAIL 265

Query: 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413
                +Q D G Y C   +     GRN     L  +    ++Q K  N +   +      
Sbjct: 266 EIPNFQQEDEGFYECIAGNL---RGRNLAKGQLIFYAPPEWEQ-KIQNTYLSIY------ 315

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
            D +  EC A G P P Y W + G  L      +  N  L I  + V D G Y C A N 
Sbjct: 316 -DNLFWECKASGKPNPLYTWLKNGERLNPEERIQIENGTLVITMLNVSDSGVYQCAAENK 374

Query: 474 RSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLN 530
              + ++  + + A  P+F+     K+   Q   D+T  C+    P  T SW R  E   
Sbjct: 375 YQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRATISWKRGME--- 431

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
                L    R F+ ++     Y     D   Y C A NQ     ++  L V+  +    
Sbjct: 432 ----SLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATNQFGVAKNTGSL-VVKERTVIT 486

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GN 642
             P + +   GE  ++ + C     P  +  F+W  +G++I        FE       G+
Sbjct: 487 IPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFIWSFNGDVIDLKKGVAHFERIGGESVGD 544

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L+I  +  + SG Y CT         +   +IV   P   E +  +   +    L  R  
Sbjct: 545 LMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPG 604

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
           +     + +  I       +G   ++ +  P I + G     T    +   EYE   V  
Sbjct: 605 SDNNSPIQIFTIQARTPFSVGWQAVSTV--PEI-LSGKTYNATVVGLSPWVEYEFRVVAG 661

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
           +++G          + TK +V V  P  + GG       ++   I W    +   NG   
Sbjct: 662 NSIGIGEPSKASELLRTKASVPVVAPTNINGGGG----SRSELVITWESIPEELQNGEEF 717

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y I+ R   ++ W    E V   E  R+  R E+     + P S +E KV   N  G 
Sbjct: 718 -GYIIMLRPVGSTAW--TKERVPSVESSRFVYRNES-----ITPLSPFEVKVGVYNNEGE 769

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           G  S+ S  Y+   D+P QAP           ++ +SW+ +   +     + Y++ +   
Sbjct: 770 GSLSTVSIVYSG-EDEPQQAPRGTSVQSFSASEMEVSWKAIAWNRNTGRVLGYEVLYWTD 828

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  E     ++  GNV      I      T Y   V+A N  G GP S
Sbjct: 829 DSKESMIGKIRVSGNV--TTKNITGLKANTIYFASVRAYNTAGAGPSS 874


>gi|296475002|tpg|DAA17117.1| TPA: contactin-3-like [Bos taurus]
          Length = 1081

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 259/797 (32%), Positives = 391/797 (49%), Gaps = 34/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 77  QGPVFVKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDLSM 126

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           + R+ L  GNL++ +P +  D G+Y C A+N  G+I+S   +L F ++  F  K    + 
Sbjct: 127 EYRYKLIRGNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVS 186

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 187 VREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 246

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 247 YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 304

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 305 LGNPVPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGR 364

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NGE L  E       +R 
Sbjct: 365 LTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNGEALVLE-------ERI 417

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 418 QIENGALTISNLN-VTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQV 476

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P+    WKK   I+    R     +G L I  V++ D+GIY+C A N
Sbjct: 477 GSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAEN 536

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LL   + W  NG   
Sbjct: 537 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALA 595

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 596 DFRKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 654

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+
Sbjct: 655 ESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GK 709

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 710 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 769

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    + R  S   ++ YE
Sbjct: 770 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYIFRNESILPFSLYE 828

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 829 VKVGVYNNKGEGPFSPV 845



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 162/658 (24%), Positives = 251/658 (38%), Gaps = 78/658 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q D+G+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 331 FSGVLEIPNFQQEDSGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEL----- 382

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 383 ---AVEDSLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 439

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q  +++   C+    P    SW + 
Sbjct: 440 IAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KK 498

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           GE++  E     ++   F+ D  L I  +  + D  +Y C A+NQ      +  L V+T 
Sbjct: 499 GEVIVQE-----NERTSFLNDGGLKIVNVT-KADAGIYTCIAENQFGKANGTTHL-VVTE 551

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE---- 639
                  P   +   GE  +V + C  +  P     F W  +G +         FE    
Sbjct: 552 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGG 609

Query: 640 --NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
             +G+L+I  +    SG Y C          S   LIV   P   E +  K+        
Sbjct: 610 SSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESV--KVDEITDTTA 667

Query: 698 QLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
           QL     T+    V AY +       +G      +  P + IDG     T        EY
Sbjct: 668 QLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--PEV-IDGKTHTATVVELNPWVEY 724

Query: 756 E--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DG 801
           E   V  + +G         K+ T+  V    P  + GG       ++   I W    + 
Sbjct: 725 EFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEE 780

Query: 802 ATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
             NG     +  ++ +  TNW      +   V   +  RY  R E+     ++P+S YE 
Sbjct: 781 LQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYIFRNES-----ILPFSLYEV 829

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   
Sbjct: 830 KVGVYNNKGEG-PFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSNGHL 888

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           + Y++ +      E  S  LK  GNV  A +R + S   YYT     V+A N  G GP
Sbjct: 889 LGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNLAYYT----AVRAFNSAGTGP 942


>gi|359073808|ref|XP_003587094.1| PREDICTED: contactin-2-like [Bos taurus]
          Length = 1040

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 284/804 (35%), Positives = 393/804 (48%), Gaps = 51/804 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP  ++F   + S    +TL+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEEQPLGLLF--PEESTEEKVTLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RQQLVGGNLVIMNPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVGFEDEGTYECEAENTKG 313

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D+  D  +DL W C A G P     W RNGE       P
Sbjct: 314 RDTVQGRIIVQAQPEWLRVISDREADIGSDLHWACAAAGKPRPAVRWLRNGE-------P 366

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 367 LTSQARVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVR 425

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG V I C P AAPK   +W K   I+ +  R  +  +G L+I  VSR D G 
Sbjct: 426 RLIPAARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNVSRSDEGK 485

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ ++W
Sbjct: 486 YTCFAENFMGKANSTGTLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFVW 544

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +      +  ++    G L I NA     G+Y C  ++ V   S + TV+V
Sbjct: 545 TLDDFPIDFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDSASKEATVLV 604

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  TS  + W+ G  N  PI  Y + ART  +  W  V  +    E
Sbjct: 605 RGPPGAPGGVVVRDISDTSVQLSWSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPTNIE 664

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + G
Sbjct: 665 -----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSG 719

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L+++W P+ RE Q+     Y + +R++  T +Q+  +    +    V    S 
Sbjct: 720 GGGAPGELTVTWTPMSREYQHGGGFGYLVSFRRQGGTSWQTARVPG-ADAQYFVYSNDSI 778

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
             YT +EVK+++ N  G GPES V
Sbjct: 779 RPYTPFEVKIRSYNRRGDGPESLV 802


>gi|344266727|ref|XP_003405431.1| PREDICTED: contactin-1-like [Loxodonta africana]
          Length = 1037

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 269/793 (33%), Positives = 403/793 (50%), Gaps = 41/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + V+   + S    ++L+C A   P P Y+W        R+    ID  SD
Sbjct: 51  GPIFEEQPVNTVY--PEESPEGKVSLNCRARASPFPVYKW--------RMNNGDIDLTSD 100

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE+  
Sbjct: 101 -RYSMVGGNLVINNPDKQQDAGIYYCLASNNYGMVRSIEATLSFGYLDPFPPEERPEVRV 159

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP +YP  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 160 KEGKGMVLLCDPPYHYPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 219

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V +EC A 
Sbjct: 220 YSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDVYALMGQNVTIECFAL 277

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N +   +    I 
Sbjct: 278 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIKGKDKHKARIY 337

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D      
Sbjct: 338 VQAYPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------ 391

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                 + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG
Sbjct: 392 ------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGG 441

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  +  I+E+G+L I+ ++R+D GIY+C A N  
Sbjct: 442 RVIIECKPKAAPKPKFSWSKGTEWLVNSSKVLIWEDGSLEINNITRNDGGIYTCFAENNR 501

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L++ + P+     P    I    N  ++C+A  +  LD+ ++W+ NG  I  
Sbjct: 502 GKANSTGTLVITN-PTRIILAPINADITVGENATMQCAAAADPALDLTFVWSFNGYVIDF 560

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 561 NKENTHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 620

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ +V  TSA + W+ G+ N  PI+ Y I  +T  +  W +        +     G  E
Sbjct: 621 LRIEDVRATSAALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNME 675

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           A+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 676 AARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELT 735

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++  +  E++  T+    ++G  V +  +    T ++VK
Sbjct: 736 ITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDIGRYVHKDETMRPSTAFQVK 794

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 795 VKAFNNKGDGPYS 807



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 139/596 (23%), Positives = 224/596 (37%), Gaps = 76/596 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 356 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 407

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 408 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 467

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 468 NSSKV-------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITNPTRI 518

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +      + A    FVW  +G +I        ++       NG 
Sbjct: 519 ILAPINADITVGENATMQCAAAADPALDLTFVWSFNGYVIDFNKENTHYQRNFMLDSNGE 578

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +   A    L     
Sbjct: 579 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDVRATSAALTWSRG 638

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
           +     +    I T     I + D  + +T    I+G +            EYE   V  
Sbjct: 639 SDNHSPISKYTIQTKT---ILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVAT 695

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-- 809
           +T+G         KI T        P  + GG           TI W        P++  
Sbjct: 696 NTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSRE 744

Query: 810 -HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            HY      I+A   ++   W  V+  V   ++ RY  + E      + P + ++ KV A
Sbjct: 745 YHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDIGRYVHKDE-----TMRPSTAFQVKVKA 797

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G P S +   N+  D P +AP+ +G       ++S+ WE +  +      I Y 
Sbjct: 798 FNNKGDG-PYSLTAVINSAQDAPSEAPTEVGIKVLSSSEMSVHWEHVVEKVVEGYQIRYW 856

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               K+        + +EY        R+ +    T+Y V+V+A N  G GP S+V
Sbjct: 857 AAHDKEAAAHRVQVSSQEYS------ARLENLVPDTQYFVEVRACNSAGCGPPSDV 906


>gi|348510467|ref|XP_003442767.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
          Length = 1029

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 257/792 (32%), Positives = 378/792 (47%), Gaps = 29/792 (3%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           + P F KQP  +V+ +       ++  SC A G P P Y W        RL    I+P +
Sbjct: 25  QSPVFTKQPGSIVYPVENVEKNREVVFSCEAKGSPPPMYRW--------RLNGTEINPKT 76

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              ++LSGGNL I+   + +D G+Y C ASN FG+I+S    L F ++  F  +R   + 
Sbjct: 77  GSHYSLSGGNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTFAYLENFKTQRRSSVS 136

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   + + W  + +P FV++D R F+S + G LY + +E  D GN
Sbjct: 137 VREGQGVVLLCGPPPHSGDLVFSWIFNEYPTFVKQDTRRFISQETGNLYIAKVEPSDVGN 196

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVA 423
           Y+C V + V+ T   GP  PL +   S+    ++       FPE      G  V+LEC A
Sbjct: 197 YTCVVTNTVTKTRVQGPPTPLVL--RSDGVMGEYEPKIEVQFPELVHVAKGSTVKLECFA 254

Query: 424 FGYPVPSYNWTRRGS-PLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P PS +W R  + P PR       + +L IP  + ED G Y C A N R        
Sbjct: 255 LGNPAPSISWRRVDNVPFPRKVDMRKASGVLEIPYFQQEDAGTYECVAENSRGMNTVKGK 314

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +S  A P+      D        L W C+A G P  +Y W +NGE L S       ++R 
Sbjct: 315 LSFYAPPHLIETPQDVQKLIDDSLAWECKATGKPKPSYRWMKNGENLES------TEERI 368

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            +   VL+I  L    D  MYQC A N+    YS+A+LRV+ + P F    L S+T    
Sbjct: 369 QVASGVLSISRLT-LTDTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQLRSQTLVKV 427

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+  + C P+ +P     W+K    +    R  I +NG+L I  V++ D+G+Y+C A N
Sbjct: 428 GGDALVECKPKMSPWGVISWRKGSEPLQETDRISILDNGSLRIWNVTKSDAGLYTCVARN 487

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G+  S G +IV   P+    L   + +    ++ L C    +  L++ + W  N   I
Sbjct: 488 QFGVASSTGSIIVKE-PTVITTLASTLDVTVGESVVLPCQVSHDPSLELKFTWFFNEQLI 546

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
                            G + I N     AG+Y C V++ V  IS    ++V GPPG P 
Sbjct: 547 HFGSHGGFFEKVGGHSAGDIMIRNVQLRHAGKYTCAVQTKVDSISVAVDLVVRGPPGPPT 606

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            +QV  +  T+A++ W  G  N  PIT Y I ART ++  W  V+      EV R T R 
Sbjct: 607 SIQVEGITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTV---PEVVRGT-RL 662

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
            A++ + L PW  YEF+V+A N +G GEPS PS Q  T    P   P+ + GGGG   +L
Sbjct: 663 TATVID-LSPWVEYEFRVLASNSIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSEL 721

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+P E QN P   Y + +R    T +    +         V +  S   ++ ++V
Sbjct: 722 VITWEPVPEELQNGPGFGYVVAFRPHGATGWMQAAVPS-AEASRYVFKNESIQPFSPFQV 780

Query: 963 KVQAINDVGPGP 974
           KV   N++G GP
Sbjct: 781 KVGVYNNLGEGP 792



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 172/759 (22%), Positives = 285/759 (37%), Gaps = 83/759 (10%)

Query: 256 GNLIINDPRQVEDRGSYHCKASNKFGSIISES-----VQLAFGFIGEFNLK---RAPEIG 307
           GNL I    +  D G+Y C  +N       +      V  + G +GE+  K   + PE+ 
Sbjct: 182 GNLYIAK-VEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPELV 240

Query: 308 NQNWGKA--MFCDPPTNYPGVNYYWAR-DYFPNFVEEDKRVFVSYDGALYFSALEQIDAG 364
           +   G    + C    N P  +  W R D  P   + D R      G L     +Q DAG
Sbjct: 241 HVAKGSTVKLECFALGN-PAPSISWRRVDNVPFPRKVDMR---KASGVLEIPYFQQEDAG 296

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
            Y C     V++  R       K+  ++    ++ P +  K         D +  EC A 
Sbjct: 297 TYEC-----VAENSRGMNTVKGKLSFYAPPHLIETPQDVQKLI------DDSLAWECKAT 345

Query: 425 GYPVPSYNWTRRGSPLPRNA-YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G P PSY W + G  L       +  + +L+I  + + D G Y C A N    + S+  +
Sbjct: 346 GKPKPSYRWMKNGENLESTEERIQVASGVLSISRLTLTDTGMYQCVAGNKHGEVYSNAEL 405

Query: 484 SIQA-EPNFTIPLTDKHMDNQ------ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            + A  P+F+       + +Q       D    C+    P    SW +  E       PL
Sbjct: 406 RVIAVAPDFS----HNQLRSQTLVKVGGDALVECKPKMSPWGVISWRKGSE-------PL 454

Query: 537 EDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           ++ DR  I DN  ++R  N  + D  +Y C A+NQ     S+    ++  +P+     L 
Sbjct: 455 QETDRISILDNG-SLRIWNVTKSDAGLYTCVARNQFGVASSTGS--IIVKEPTVITT-LA 510

Query: 596 SETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFEN------GNLLISP 647
           S      G +V + C     P  + KF W  +  +I  G     FE       G+++I  
Sbjct: 511 STLDVTVGESVVLPCQVSHDPSLELKFTWFFNEQLIHFGSHGGFFEKVGGHSAGDIMIRN 570

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
           V    +G Y+C              L+V   P     +  +       +L  R       
Sbjct: 571 VQLRHAGKYTCAVQTKVDSISVAVDLVVRGPPGPPTSIQVEGITDTTASLSWRPGPDNHS 630

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG- 764
            +    I       +G   +  +  P + + G  L  T    +   EYE   +  +++G 
Sbjct: 631 PITAYTIQARTPFSLGWQAVTTV--PEV-VRGTRLTATVIDLSPWVEYEFRVLASNSIGT 687

Query: 765 ----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIART 817
               K S +       P   P  V      ++   I W    +   NG P   Y +  R 
Sbjct: 688 GEPSKPSKQARTKGTSPKVTPANVSGGGGSRSELVITWEPVPEELQNG-PGFGYVVAFRP 746

Query: 818 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
           +  + W   +  V   E  RY  + E+     + P+S ++ KV   N LG G P  P   
Sbjct: 747 HGATGWMQAA--VPSAEASRYVFKNES-----IQPFSPFQVKVGVYNNLGEG-PFGPVTT 798

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 937
             +  ++P +AP+R+        ++ +SW+ LP        + Y++ +  +++ E  +  
Sbjct: 799 IYSAEEEPGRAPTRVRAKSLSASEIEVSWKALPWNANKKRVLGYELRYWSRSEREDTASV 858

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +  GN    ++R       T Y V V+A N  G GP S
Sbjct: 859 QRTVGNQTSTIIR--GVKGSTAYYVSVRAYNTAGTGPPS 895


>gi|334347566|ref|XP_001377637.2| PREDICTED: contactin-1 [Monodelphis domestica]
          Length = 1015

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 265/794 (33%), Positives = 393/794 (49%), Gaps = 43/794 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    ++L+C A   P P Y+W   ++  D         L++
Sbjct: 29  GPIFEEQPIDTIY--PEESPDGKVSLNCRARASPFPVYKWRMNNWDID---------LTN 77

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
           +R+++ GGNL+IN+P ++ D G Y C  SN +G + S    L+FG++  F  +   E+  
Sbjct: 78  ERYSMVGGNLVINNPDKLRDAGKYFCLVSNIYGMVRSTEATLSFGYLDPFPPEERAEVKV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR +VS  +G LY + +E  D GN
Sbjct: 138 KEGIGLVLLCDPPYHFPDDLSYRWLLNEFPIFITMDKRRYVSQTNGNLYIANVEASDRGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P S+     +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPL--IPLSDRTTKLYPADIKVQFKDTYALMGHNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R        I 
Sbjct: 256 GNPVPEIRWRKVLEPMPSTAEISMSGAVLKIFNIQLEDEGTYECEAENIRGKDRHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D   D  +DL W C A G P  T  W RNG   +   L L        
Sbjct: 316 VQAFPEWVEHINDTEADIGSDLYWPCVATGKPIPTIRWLRNGYAYHKGELRLYG----LT 371

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            DN              MYQC A+N     Y++A+L++L + P+F+  P++ +T A +GG
Sbjct: 372 FDNA------------GMYQCIAENAHGAIYANAELKILAMAPTFEMNPMKKKTLAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+++G+L I  ++R D G Y+C A N  
Sbjct: 420 RVLIECKPKAAPKPKFSWSKGTEWLVNSTRILIWDDGSLEIRNITRADEGTYTCFAENNR 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
           G   + G L++         LPP    +    N  ++CSA  +  LD+ +IW+ NG  I 
Sbjct: 480 GKANNTGTLLITDATRI--TLPPANADVTVGENATMQCSASHDPALDLTFIWSLNGYVID 537

Query: 724 NMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
               N     N  ID  G L I  A    AG Y C  ++ V   S    ++V GPPG PG
Sbjct: 538 FSKENSHYMRNFMIDSNGDLLIKKAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPG 597

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
           GV++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  
Sbjct: 598 GVRIEDIRDTSVALTWSRGSDNHSPISKYSIQTKTILSDDWKDAK-----TDPSNIEGNM 652

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E++    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L
Sbjct: 653 ESARAVDLIPWMEYEFRVVATNILGTGEPSLPSNRIKTEGAAPNVAPSDVGGGGGSNREL 712

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
           +I+W PL RE     N  Y + ++     E++  T+    ++G  V +  +    TE++V
Sbjct: 713 TITWVPLSREYHYGNNFGYIVAFKPFGGKEWKKVTVTN-PDIGRYVHKDETMSPSTEFQV 771

Query: 963 KVQAINDVGPGPES 976
           KV+A N+ G GP S
Sbjct: 772 KVKAFNNKGDGPFS 785



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 163/774 (21%), Positives = 291/774 (37%), Gaps = 105/774 (13%)

Query: 248 DKRFTLS--GGNLIINDPRQVEDRGSYHCKASN---------KFGSIISESVQLAFGFIG 296
           DKR  +S   GNL I +  +  DRG+Y C  S+         KF  +I  S +    +  
Sbjct: 173 DKRRYVSQTNGNLYIAN-VEASDRGNYSCFVSSPSITKSVFSKFIPLIPLSDRTTKLYPA 231

Query: 297 EFNLKRAPEIGNQNWGKAMFCDPPTN-YPGVNYYWARDYFPNFVEEDKRVFVSYDGA-LY 354
           +  ++             + C    N  P + +    +  P+  E      +S  GA L 
Sbjct: 232 DIKVQFKDTYALMGHNVTLECFALGNPVPEIRWRKVLEPMPSTAE------ISMSGAVLK 285

Query: 355 FSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG 414
              ++  D G Y C  ++ +    R+     ++ FP    + ++  N+           G
Sbjct: 286 IFNIQLEDEGTYECEAEN-IRGKDRHQARIYVQAFP----EWVEHINDTEADI------G 334

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
             +   CVA G P+P+  W R G      AY +   R+     +  ++ G Y C A N  
Sbjct: 335 SDLYWPCVATGKPIPTIRWLRNGY-----AYHKGELRLY---GLTFDNAGMYQCIAENAH 386

Query: 475 SALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LLN 530
            A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+N
Sbjct: 387 GAIYANAELKILAMAPTFEMNPMKKKTLAAKGGRVLIECKPKAAPKPKFSWSKGTEWLVN 446

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           S  + + D       D  L IR +    D   Y C A+N      ++  L ++T      
Sbjct: 447 STRILIWD-------DGSLEIRNIT-RADEGTYTCFAENNRGKANNTGTL-LITDATRIT 497

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK-------IFENGNL 643
             P  ++   GE   +    + + A    F+W  +G +I              I  NG+L
Sbjct: 498 LPPANADVTVGENATMQCSASHDPALDLTFIWSLNGYVIDFSKENSHYMRNFMIDSNGDL 557

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LI       +G Y+CTA  +     +   L+V   P     +  +I      ++ L  S 
Sbjct: 558 LIKKAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGV--RIEDIRDTSVALTWSR 615

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            ++    ++         + + D  + +T   NI+G +            EYE  V    
Sbjct: 616 GSDNHSPISKYSIQTKTILSD-DWKDAKTDPSNIEGNMESARAVDLIPWMEYEFRV---- 670

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPIT----------H 810
                 T ++  G P LP     ++    +  +  +D   G  + R +T          H
Sbjct: 671 ----VATNILGTGEPSLPS--NRIKTEGAAPNVAPSDVGGGGGSNRELTITWVPLSREYH 724

Query: 811 YK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           Y      I+A   +    W  V+  V   ++ RY  + E      + P + ++ KV A N
Sbjct: 725 YGNNFGYIVAFKPFGGKEWKKVT--VTNPDIGRYVHKDE-----TMSPSTEFQVKVKAFN 777

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
             G G P S +    +  D P +AP+ +        ++S+SW+ +  +      I Y   
Sbjct: 778 NKGDG-PFSLTAVIYSAQDAPSEAPTDVSIKVLSSSEISVSWKHVLEKTVEGYQIRYWAA 836

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             K+   +    + ++Y        ++ +     +Y V+V+A N  G GP S+V
Sbjct: 837 QDKEAAAQRVQVSSQDYS------AKLENLLPDMQYSVEVRAYNSAGYGPPSDV 884


>gi|282847346|ref|NP_001164258.1| contactin-5 isoform 1 precursor [Mus musculus]
 gi|341940370|sp|P68500.2|CNTN5_MOUSE RecName: Full=Contactin-5; AltName: Full=Neural recognition
           molecule NB-2; Flags: Precursor
          Length = 1098

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 253/795 (31%), Positives = 382/795 (48%), Gaps = 32/795 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P DV+F     S    + L+C   G P+PSY W +            I   SD
Sbjct: 97  GPVFVQEPDDVIFPTD--SDEKKVALNCEVRGNPSPSYRWLRN--------GTEIALESD 146

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P ++ D G Y C A+N FGSI+S    L F ++G F+ + R+    
Sbjct: 147 YRYSLIDGTFIISNPSELRDSGLYQCLATNSFGSILSREATLQFAYLGNFSGRTRSAVSV 206

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 207 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 266

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 267 ICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 324

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  +       +L IPN++++D G Y C A N R        + 
Sbjct: 325 GNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQ 384

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           I   P++   L D  +D+ + L W C+A G P  TY W +NG        PL  Q R   
Sbjct: 385 IFTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDT 437

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + +L I+ +N + D  MYQC A+N+    Y+SA+L++L   PSF+   ++      +  
Sbjct: 438 VNGILAIQSVN-QSDAGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDR 496

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   W+K    + +  R  I  +G+L I   S+ D G Y C   N+ 
Sbjct: 497 GVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIF 556

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 557 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 615

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E          L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 616 EKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGV 675

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V V E+ +++AT+ W+    N  PI+ Y + AR+ ++  W       +    +  TG  E
Sbjct: 676 VIVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDME 730

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           +++   L PW  YEF+V+A N +G G+PS PS    T    P  APS + G  G+  +L 
Sbjct: 731 SAMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELV 790

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EVK
Sbjct: 791 IAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVK 849

Query: 964 VQAINDVGPGPESEV 978
           V   N+ G GP S++
Sbjct: 850 VGVYNNKGDGPFSQI 864


>gi|148693018|gb|EDL24965.1| mCG142130 [Mus musculus]
          Length = 1007

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 256/796 (32%), Positives = 384/796 (48%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P DV+F     S    + L+C   G P+PSY W +            I   SD
Sbjct: 6   GPVFVQEPDDVIFPTD--SDEKKVALNCEVRGNPSPSYRWLRN--------GTEIALESD 55

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P ++ D G Y C A+N FGSI+S    L F ++G F+ + R+    
Sbjct: 56  YRYSLIDGTFIISNPSELRDSGLYQCLATNSFGSILSREATLQFAYLGNFSGRTRSAVSV 115

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 116 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 175

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 176 ICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 233

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  +       +L IPN++++D G Y C A N R        + 
Sbjct: 234 GNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQ 293

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           I   P++   L D  +D+ + L W C+A G P  TY W +NG        PL  Q R   
Sbjct: 294 IFTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDT 346

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + +L I+ +N + D  MYQC A+N+    Y+SA+L++L   PSF+   ++      +  
Sbjct: 347 VNGILAIQSVN-QSDAGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDR 405

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   W+K    + +  R  I  +G+L I   S+ D G Y C   N+ 
Sbjct: 406 GVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIF 465

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 466 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDF 524

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E          L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 525 EKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGV 584

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ +++AT+ W+    N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 585 VIVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGWQTV------KTVPEVITGDM 638

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS PS    T    P  APS + G  G+  +L
Sbjct: 639 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHEL 698

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +         + R  S    T +EV
Sbjct: 699 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 757

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 758 KVGVYNNKGDGPFSQI 773


>gi|344276488|ref|XP_003410040.1| PREDICTED: contactin-6 [Loxodonta africana]
          Length = 1016

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 258/798 (32%), Positives = 392/798 (49%), Gaps = 38/798 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D +   P FI++P DV+F L      ++I L+C A GYP P Y W + D          I
Sbjct: 8   DGLLSRPIFIQEPQDVIFPLDSSE--SEIILNCAAHGYPLPQYRWKQND--------TDI 57

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D      + L GG+L I+ P   +D G+Y C A+N  G+I+S   +L F +I EF  K  
Sbjct: 58  DFTMSYHYRLDGGSLAISSPPTAQDIGTYQCLATNPLGTILSRKAKLQFAYIEEFETKTR 117

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  +  P +V+ED R FVS + G LY + +E  
Sbjct: 118 STVSVREGQGVVLLCGPPPHVGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS 177

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRL 419
           D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     ++L
Sbjct: 178 DVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKL 235

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+ +W R  GS LP    +     IL IPN + ED+G Y C A N R    
Sbjct: 236 ECFALGNPVPNISWRRMDGSLLPGKVKYSKSKAILEIPNFQQEDEGFYECTAGNLRGRNI 295

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   +   A P +   + + ++     L W C+A G P   Y+W +NGE LN E      
Sbjct: 296 AKGQLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGKPSPYYTWLKNGERLNPE------ 349

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
            +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+L+VL   P+F K P++  +
Sbjct: 350 -ERIQIENGTLIITMLNVS-DSGIYQCAAENKYQIIYANAELKVLASAPNFSKNPIKKVS 407

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG+++I C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y+C
Sbjct: 408 VVQVGGDISIECKPIAFPRAAVSWKRGTENLRQSKRVFLIEDGSLKIYNVTRSDAGSYTC 467

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G+ +S G L+V    +     P K+ +    ++ L C    +  ++V ++W+ N
Sbjct: 468 IATNQFGVAKSTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFN 526

Query: 719 GVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
           G  I   DL +  T    I G   G L I N     +G+Y C V++T+  +S    +IV 
Sbjct: 527 GDII---DLKKGVTHFERIGGESAGDLMIRNIQLNHSGKYMCTVQTTLEILSAVADIIVR 583

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG P  V+V  +  +++ + W  G  N  PI  + I  RT ++  W       +    
Sbjct: 584 GPPGPPEDVRVEHISSSTSQLSWRPGPDNNSPIQIFTIQTRTPFSLGW-----QAVSTVP 638

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
           +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP+ I GG
Sbjct: 639 EILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGG 698

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG   +L I+WE +P E QN     Y + +R    T +  E +    +    + R  S  
Sbjct: 699 GGSRSELVITWESIPEELQNGEGFGYIVMFRPVGSTTWTKERVLSVESSRF-IYRNESII 757

Query: 956 YYTEYEVKVQAINDVGPG 973
             + +EVKV   N+ G G
Sbjct: 758 PLSPFEVKVGVYNNEGEG 775



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 192/794 (24%), Positives = 296/794 (37%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 142 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 190

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  N  W
Sbjct: 191 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGN-PVPNISW 249

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C   +     GRN     L 
Sbjct: 250 RRMDGSLLPGKVKYSKS-----KAILEIPNFQQEDEGFYECTAGNL---RGRNIAKGQLI 301

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 302 FYAPPEWEQ-KIQNTYLSIY-------DSLFWECKASGKPSPYYTWLKNGERLNPEERIQ 353

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  PNF+     K    Q   
Sbjct: 354 IENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELKVLASAPNFSKNPIKKVSVVQVGG 413

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D++  C+    P    SW R  E L       + +  + I+D  L I Y     D   Y 
Sbjct: 414 DISIECKPIAFPRAAVSWKRGTENLR------QSKRVFLIEDGSLKI-YNVTRSDAGSYT 466

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ     S+  L V+  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 467 CIATNQFGVAKSTGSL-VVKERTVITIPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 523

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G+II        FE       G+L+I  +  + SG Y CT      +  +   +IV 
Sbjct: 524 SFNGDIIDLKKGVTHFERIGGESAGDLMIRNIQLNHSGKYMCTVQTTLEILSAVADIIVR 583

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   ++   L  R        + +  I T     +G   ++ +  P I 
Sbjct: 584 GPPGPPEDVRVEHISSSTSQLSWRPGPDNNSPIQIFTIQTRTPFSLGWQAVSTV--PEI- 640

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 641 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGG 700

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y ++ R   ++TW    E V+  E  R+  R 
Sbjct: 701 ----SRSELVITWESIPEELQNGEGF-GYIVMFRPVGSTTW--TKERVLSVESSRFIYRN 753

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ S  Y+   D+P  AP           ++
Sbjct: 754 ES-----IIPLSPFEVKVGVYNNEGEGSLSTASIVYSG-EDEPRMAPRGTSVQSVSASEM 807

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV   V  I      T Y  
Sbjct: 808 EVSWNAIDWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TVKNITGLKANTLYFA 865

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 866 SVRAYNTAGTGPSS 879


>gi|317418925|emb|CBN80963.1| Contactin-4 [Dicentrarchus labrax]
          Length = 1031

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 252/807 (31%), Positives = 385/807 (47%), Gaps = 39/807 (4%)

Query: 181 ENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVA 240
           E P     GP F ++P+D +F LS       + ++C A G P P Y W        ++  
Sbjct: 20  ETPKNTRHGPVFTQEPSDSIFPLSTDD--KQVFINCKAKGNPPPHYRW--------KVDG 69

Query: 241 NLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL 300
             I+  SD  + L  GNL+IN+P  +   G Y C A+N FG+++S   ++ F F+  F+ 
Sbjct: 70  REINTESDPNYNLVEGNLLINNPHVINHGGVYQCIATNTFGTVVSREAKVQFAFLQNFSR 129

Query: 301 KRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSAL 358
           K    +   +     + C PP +Y  + Y W  +   +F+ +D R F+S   G LY + +
Sbjct: 130 KPRNTVSVREGQAVVLLCGPPPHYGEIKYSWVFNGQRSFLRQDARRFISQRTGNLYIAKV 189

Query: 359 EQIDAGNYSCNVQSKVSDTGRNGPFF--PLKVFPHSNFQQLKFPNNFPKTFPEAPKA--G 414
           E  D GNY+C V++ ++    N   F  P  V    +    ++       FP+      G
Sbjct: 190 EASDVGNYTCVVRNMMT----NATVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTLHVSKG 245

Query: 415 DKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
             V+LEC A G PVPS +W R  G+PLP      + + +L IP  + ED G Y C A N 
Sbjct: 246 SSVKLECFALGNPVPSISWRRADGNPLPGKIKINHSSGVLEIPYFRPEDAGVYECIAENS 305

Query: 474 R--SALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
           R  +     +      + ++   L D HM   A+L W C+A G P  TY W +NG+    
Sbjct: 306 RGRNVARGQLLFHNVEQLHWVQTLKDAHMAIDANLQWECKAIGKPRATYKWLKNGQ---- 361

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
              PL  + R  ++   LTI  ++   D  MYQC A N+    Y+SA+L+V+   P F +
Sbjct: 362 ---PLTAEGRIHVEAGRLTISRIS-LLDSGMYQCVADNEQGAVYASAELKVVASPPDFTR 417

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 651
           RP++  T    GG V + C P A+P+    W + G ++    R+ I E+G L I+ +S+ 
Sbjct: 418 RPVKKSTVIQRGGEVVLECRPHASPRATISWWRGGELLKDSKRQTIMEDGTLRITNISKS 477

Query: 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
           D G Y+C A N  G   S G L+V   P+     P  +     ++L L C   ++  L  
Sbjct: 478 DGGRYTCVARNHFGTSSSTGTLVVKE-PTRIIVPPLSLDATVGQSLVLPCEVSSDSSLSP 536

Query: 712 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            + W  NG  I        E       G L+ + N     +G+Y C+V + V  +S    
Sbjct: 537 IFKWFFNGKAIDFSRQEHFEMIGGGFAGDLM-VRNIQLKHSGKYVCMVHTEVDTVSAAAD 595

Query: 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 831
           +IV GPPG P G+ V ++  T+  + W  G  N  P+T Y + ART ++  W       +
Sbjct: 596 LIVRGPPGAPEGLVVTDITDTTVQLSWGSGPDNHSPVTMYMVQARTPFSIGW-----QTV 650

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
               D   G+   +    L PW  YEF+V+A N +G GEPS+PS Q  T A  P  AP  
Sbjct: 651 RTVPDSVPGQMMHATVKDLNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPVS 710

Query: 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 951
           + GGGG  G+L I WEP+P E+Q+  +  Y + +R    + +  +T+    +    + R 
Sbjct: 711 VSGGGGARGELVIMWEPVPEEQQSGEDFGYVVAFRPLGSSTW-IQTVLASPDASRYIYRN 769

Query: 952 PSEFYYTEYEVKVQAINDVGPGPESEV 978
            S    +++EVKV   N VG G  S V
Sbjct: 770 DSIAPLSQFEVKVGVYNSVGEGRFSRV 796



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 150/652 (23%), Positives = 253/652 (38%), Gaps = 65/652 (9%)

Query: 350 DGALYFSALEQIDAGNYSCNVQ-SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
            G L        DAG Y C  + S+  +  R    F        N +QL    ++ +T  
Sbjct: 282 SGVLEIPYFRPEDAGVYECIAENSRGRNVARGQLLF-------HNVEQL----HWVQTLK 330

Query: 409 EAPKAGDK-VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYI 467
           +A  A D  ++ EC A G P  +Y W + G PL            LTI  + + D G Y 
Sbjct: 331 DAHMAIDANLQWECKAIGKPRATYKWLKNGQPLTAEGRIHVEAGRLTISRISLLDSGMYQ 390

Query: 468 CRASNDRSALESSVTISIQAEP-NFTIPLTDKH--MDNQADLTWTCEAFGVPDVTYSWFR 524
           C A N++ A+ +S  + + A P +FT     K   +    ++   C     P  T SW+R
Sbjct: 391 CVADNEQGAVYASAELKVVASPPDFTRRPVKKSTVIQRGGEVVLECRPHASPRATISWWR 450

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
            GELL       + + +  ++D  L I  ++ + D   Y C A+N   T  S+  L V+ 
Sbjct: 451 GGELLK------DSKRQTIMEDGTLRITNIS-KSDGGRYTCVARNHFGTSSSTGTL-VVK 502

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE----- 639
                   PL  +   G+   +    + +++  P F W  +G  I    R++ FE     
Sbjct: 503 EPTRIIVPPLSLDATVGQSLVLPCEVSSDSSLSPIFKWFFNGKAI-DFSRQEHFEMIGGG 561

Query: 640 -NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L++  +    SG Y C          +   LIV   P   E L   +T      +Q
Sbjct: 562 FAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPPGAPEGL--VVTDITDTTVQ 619

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
           L   +  +    V            ++    + T   ++ G ++  T        +YE  
Sbjct: 620 LSWGSGPDNHSPVTMYMVQARTPF-SIGWQTVRTVPDSVPGQMMHATVKDLNPWVDYEFR 678

Query: 757 CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATN 804
            V  ++VG         +I TK  V    P  + GG       +    I W    +   +
Sbjct: 679 VVAINSVGVGEPSTPSKQIRTKAAVPKVAPVSVSGGGGA----RGELVIMWEPVPEEQQS 734

Query: 805 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           G     Y +  R   +STW  +   +   +  RY  R ++     + P S +E KV   N
Sbjct: 735 GEDF-GYVVAFRPLGSSTW--IQTVLASPDASRYIYRNDS-----IAPLSQFEVKVGVYN 786

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            +G G  S     ++   ++P +APSR+        ++ + WEP+P        I Y++ 
Sbjct: 787 SVGEGRFSRVVTVFSA-DEEPSEAPSRVWARAVSASEIEVYWEPIPPGSSTEKIIAYEVL 845

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + +K   + ++E ++   N  +    +      T Y + V+A N  G GP S
Sbjct: 846 FWEKGSRQSEAERVRIINNTAL----LSGLKGSTVYLISVRAQNSAGLGPCS 893


>gi|431901434|gb|ELK08460.1| Contactin-1 [Pteropus alecto]
          Length = 1125

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 253/736 (34%), Positives = 377/736 (51%), Gaps = 30/736 (4%)

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
           L+  R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG++  F  +  PE
Sbjct: 34  LTSDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGIVRSTEATLSFGYLDPFPPEERPE 93

Query: 306 IG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQID 362
           +   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D
Sbjct: 94  VRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASD 153

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLEC 421
            GNYSC V S          F PL   P    +   +P +    F +     G  V LEC
Sbjct: 154 KGNYSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDIYALMGQNVTLEC 211

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
            A G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R   +   
Sbjct: 212 FALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHQA 271

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D   
Sbjct: 272 RIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYHKGELRLYD--- 328

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
                    + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A 
Sbjct: 329 ---------VTFENA----GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAA 375

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 661
           +GG V I C P+AAPKPKF W K    + +G R  I+E+G+L I+ ++R+D GIY+C A 
Sbjct: 376 KGGRVIIECKPKAAPKPKFSWSKGTEWLVNGSRTLIWEDGSLEINNITRNDGGIYTCFAE 435

Query: 662 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 721
           N  G   S G L++   P+     P    I    N  ++C+A  +  LD+ +IW+ NG  
Sbjct: 436 NNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 494

Query: 722 IGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
           I     N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG 
Sbjct: 495 IDFNKENIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 554

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G
Sbjct: 555 PGGLRIEDIRATSVALTWSRGSDNHSPISKYNIQTKTLLSDDWKDAK-----TDPPIIEG 609

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
             EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   
Sbjct: 610 NMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNR 669

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           +L+I+W PL RE     N  Y + ++  +  E++  T+    ++G  V +  +   +T +
Sbjct: 670 ELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDIGRYVHKDETMRPFTAF 728

Query: 961 EVKVQAINDVGPGPES 976
           +VKV+A N+ G GP S
Sbjct: 729 QVKVKAFNNKGDGPYS 744



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 228/597 (38%), Gaps = 78/597 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G    +          L + +V  E+ G Y C A N 
Sbjct: 293 GSDLYWPCVATGKPIPTIRWLKNGYSYHKGE--------LRLYDVTFENAGMYQCIAENT 344

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELL- 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L 
Sbjct: 345 YGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 404

Query: 530 -NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
             S TL  ED     ++ N +T        D  +Y C A+N      S+  L V+T    
Sbjct: 405 NGSRTLIWEDGS---LEINNIT------RNDGGIYTCFAENNRGKANSTGTL-VITDPTR 454

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NG 641
               P+ ++   GE   +    + + A    F+W  +G +I        ++       NG
Sbjct: 455 IILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDANG 514

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
            LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  
Sbjct: 515 ELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTW 572

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVV 759
           S  ++    ++         + + D  + +T    I+G +            EYE   V 
Sbjct: 573 SRGSDNHSPISKYNIQTKTLLSD-DWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVA 631

Query: 760 KSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT- 809
            +T+G         KI T        P  + GG           TI W        P++ 
Sbjct: 632 TNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SNRELTITWA-------PLSR 680

Query: 810 --HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             HY      I+A   ++   W  V+  V   ++ RY  + E      + P++ ++ KV 
Sbjct: 681 EYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDIGRYVHKDET-----MRPFTAFQVKVK 733

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N  G G P S +   N+  D P +AP+ +G       ++S+ WE +  +   +  I Y
Sbjct: 734 AFNNKGDG-PYSLTAVINSAQDAPSEAPTGVGVKVLSSSEISVHWEHVVEKVVESYQIRY 792

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                K+          +EY        R+ +    T+Y V+V+A N  G GP SE+
Sbjct: 793 WSVHDKEAAAHRVQVNSQEYS------ARLENLLPDTQYSVEVRACNSAGCGPPSEM 843



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 85/389 (21%), Positives = 146/389 (37%), Gaps = 71/389 (18%)

Query: 150 MEPLLFICEAS-----IQKLHYLLNDDRTYQY-GMDIENPDK------IPRGPYFIKQPT 197
           +EP+    E S     ++  +  L D+ TY+    +I   DK      +   P +++   
Sbjct: 227 LEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHQARIYVQAFPEWVEHIN 286

Query: 198 DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGN 257
           D   D+      +D+   C A G P P+  W K  Y                  +   G 
Sbjct: 287 DTEVDIG-----SDLYWPCVATGKPIPTIRWLKNGY------------------SYHKGE 323

Query: 258 LIINDPRQVEDRGSYHCKASNKFGSII--SESVQLAFGFIGEFNLKRAPEIGNQNWGKAM 315
           L + D    E+ G Y C A N +G+I   +E   LA     E N  +   +  +  G+ +
Sbjct: 324 LRLYD-VTFENAGMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKG-GRVI 381

Query: 316 FCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQS 372
               P   P   + W++     ++    R  +  DG+L  + + + D G Y+C   N + 
Sbjct: 382 IECKPKAAPKPKFSWSKG--TEWLVNGSRTLIWEDGSLEINNITRNDGGIYTCFAENNRG 439

Query: 373 KVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PS 430
           K + TG      P ++        +  P N   T       G+   ++C A   P    +
Sbjct: 440 KANSTGTLVITDPTRI--------ILAPINADIT------VGENATMQCAASFDPALDLT 485

Query: 431 YNWTRRGSPLPRNA----YFENF----NRILTIPNVKVEDQGEYICRASN--DRSALESS 480
           + W+  G  +  N     Y  NF    N  L I N +++  G Y C A    D S+  + 
Sbjct: 486 FIWSFNGYVIDFNKENIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASAD 545

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWT 509
           + +     P   + + D    + A LTW+
Sbjct: 546 LVVRGPPGPPGGLRIEDIRATSVA-LTWS 573



 Score = 42.7 bits (99), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 13/147 (8%)

Query: 621 VWKKDGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
           +W+ +   I     R     GNL+I+ P  + D+G+Y C A+N +G+  S    +     
Sbjct: 24  IWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGIVRSTEATLSF--- 80

Query: 680 SYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPN 734
            Y +  P    P++ +   + + L C        D++Y W  N   +   MD        
Sbjct: 81  GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF---- 136

Query: 735 INIDGGLLEITNASFADAGEYECVVKS 761
           ++   G L I N   +D G Y C V S
Sbjct: 137 VSQTNGNLYIANVEASDKGNYSCFVSS 163


>gi|292626879|ref|XP_697914.4| PREDICTED: contactin-4-like [Danio rerio]
          Length = 1028

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 255/795 (32%), Positives = 379/795 (47%), Gaps = 33/795 (4%)

Query: 187 PRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  P F KQP  +VF L       ++T SC A G P PSY W   D        + I P 
Sbjct: 23  PLRPVFTKQPGSIVFPLHLNEPSREVTFSCEAQGRPPPSYRWKMND--------SFISPQ 74

Query: 247 SDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPE 305
              R+++SGGNL I+   + ED G Y C ASN FG+I+S    L   ++ EF  + R+P 
Sbjct: 75  PGSRYSISGGNLRISQLNKEEDAGIYQCLASNSFGTILSREASLHIAYLEEFKTQMRSPV 134

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAG 364
              +  G  + C PP     + + W  + +P+FVE+D R FVS   G LY + +E  D G
Sbjct: 135 RVREGQGVVLLCGPPAYMGELTFSWIFNEYPSFVEQDTRRFVSQKTGNLYIAKVEPSDVG 194

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE--APKAGDKVRLECV 422
           NY+C V + V+     GP  PL +   S+    ++       FPE  A   G  V+LEC 
Sbjct: 195 NYTCVVTNTVTQNRVQGPPTPLIL--RSDGIMGEYEPKIEVQFPEVLAVAKGLTVKLECF 252

Query: 423 AFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G PVP+ +W R  G P PR       + +L IP  + ED G Y C A N R       
Sbjct: 253 ALGNPVPAISWRRPDGVPFPRKVDVSKSSGVLEIPYFQQEDAGPYECVAENSRGKNTGKG 312

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED-QD 540
            +S  A P+      D        L W C+A   P  +Y W +NGE       PLE  +D
Sbjct: 313 RLSFYAPPHLVEKPQDVQRAIDESLLWECKASAKPKPSYRWLKNGE-------PLESFED 365

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           R  + +  L+I  L    D  MYQC A+N+    +++A+LRV+ + P F    L+++T A
Sbjct: 366 RIQVINGALSISSLT-LSDTGMYQCIAENRHGRVFANAELRVIAVAPDFSNSVLKAQTLA 424

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
            +GG+V I C P  +P+    W+K    +    R  + +NG+L IS +++ D+G+Y+C A
Sbjct: 425 RQGGDVLIECRPRMSPRGMISWRKGKEALRESHRVSVLDNGSLRISNITKLDAGLYTCVA 484

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
            N  G+  S G L+V   P+       ++ +    ++ + C    +  LDV + W  N  
Sbjct: 485 RNQFGVASSAGTLVVKE-PTIITSKATQLDVTVGESVVIPCQVSRDPSLDVRFTWFFNEQ 543

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
            I                 G + I N     AG Y C V++ V   S  T V+V GPP  
Sbjct: 544 LINFGSHGGYFEKVGGASAGDIMIRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGPPDP 603

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           P  ++V EV +T++ + W+ G  N  P+  Y I  R+ ++  W         K V    G
Sbjct: 604 PLDIRVDEVTETTSFVSWSPGPDNHSPVFAYNIQIRSPFSLGW------QAAKTVPESLG 657

Query: 841 RKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
            +++S   V L PW  YEF+V+A N +G GEP+ PS +  T    P   P+R+ GGGG  
Sbjct: 658 GQQSSARVVELSPWVEYEFRVLATNSIGTGEPTKPSQKIRTKDTMPRITPARVSGGGGSR 717

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            +L I+WEP+P E+Q  P   Y + +R      +    +    +    + +  S   ++ 
Sbjct: 718 SELVITWEPVPEEQQAGPGFGYVVAFRPLGGQNWMQAAVTS-PDASRYIFKNDSIPPFSP 776

Query: 960 YEVKVQAINDVGPGP 974
           + VKV   N+ G GP
Sbjct: 777 FHVKVGVYNNKGEGP 791



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 168/697 (24%), Positives = 268/697 (38%), Gaps = 111/697 (15%)

Query: 330 WARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFP 385
           W R   P+ V   ++V VS   G L     +Q DAG Y C   N + K +  GR   + P
Sbjct: 263 WRR---PDGVPFPRKVDVSKSSGVLEIPYFQQEDAGPYECVAENSRGKNTGKGRLSFYAP 319

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY 445
               PH     ++ P +  +   E+      +  EC A   P PSY W + G PL     
Sbjct: 320 ----PH----LVEKPQDVQRAIDES------LLWECKASAKPKPSYRWLKNGEPL---ES 362

Query: 446 FEN----FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFT-IPLTDKH 499
           FE+     N  L+I ++ + D G Y C A N    + ++  + + A  P+F+   L  + 
Sbjct: 363 FEDRIQVINGALSISSLTLSDTGMYQCIAENRHGRVFANAELRVIAVAPDFSNSVLKAQT 422

Query: 500 MDNQA-DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 558
           +  Q  D+   C     P    SW +  E L        +  R  + DN  ++R  N  +
Sbjct: 423 LARQGGDVLIECRPRMSPRGMISWRKGKEAL-------RESHRVSVLDNG-SLRISNITK 474

Query: 559 -DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 617
            D  +Y C A+NQ     S+  L V+        +  + +   GE  +V I C     P 
Sbjct: 475 LDAGLYTCVARNQFGVASSAGTL-VVKEPTIITSKATQLDVTVGE--SVVIPCQVSRDPS 531

Query: 618 --PKFVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDES 669
              +F W  +  +I  G     FE       G+++I  +    +G Y+C A        S
Sbjct: 532 LDVRFTWFFNEQLINFGSHGGYFEKVGGASAGDIMIRNIQLRHAGRYTC-AVQTKVDSAS 590

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-----HNGVRIGN 724
               +V+ GP      PP         L +R    TE    V+  W+     H+ V   N
Sbjct: 591 IATDVVVRGPPD----PP---------LDIRVDEVTETTSFVS--WSPGPDNHSPVFAYN 635

Query: 725 MDLNE--------LETPNINIDGGLLEITNASFADAGEYECVVKST--VG---------K 765
           + +           +T   ++ G          +   EYE  V +T  +G         K
Sbjct: 636 IQIRSPFSLGWQAAKTVPESLGGQQSSARVVELSPWVEYEFRVLATNSIGTGEPTKPSQK 695

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW--TDGATNGRPITHYKIIARTNWNSTW 823
           I TK T+    P  + GG       ++   I W          P   Y +  R      W
Sbjct: 696 IRTKDTMPRITPARVSGGGG----SRSELVITWEPVPEEQQAGPGFGYVVAFRPLGGQNW 751

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
              +  V   +  RY  + ++     + P+S +  KV   N  G G P  P     +  +
Sbjct: 752 MQAA--VTSPDASRYIFKNDS-----IPPFSPFHVKVGVYNNKGEG-PFGPVTTIYSAEE 803

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 943
           +P +APSRI        ++ +SW+PLP        + Y++ +    D    +  ++  GN
Sbjct: 804 EPSRAPSRIRAKSLSASEVEVSWKPLPWSTSRTRIMGYELRYWSTKDRPDTASVMRTVGN 863

Query: 944 VGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
              AV+R   PS    + Y +K++A N  G GP+S V
Sbjct: 864 RTSAVIRGLDPS----STYNIKLKAYNSAGVGPDSAV 896


>gi|432866112|ref|XP_004070704.1| PREDICTED: contactin-4-like [Oryzias latipes]
          Length = 1029

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 260/801 (32%), Positives = 386/801 (48%), Gaps = 43/801 (5%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P F KQP  VVF +       ++  SC A G P P Y W        +L  + I P    
Sbjct: 27  PIFTKQPGSVVFPIQPGESRKEVVFSCEAQGQPAPFYRW--------KLNDSYIHPNPGS 78

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIGN 308
           RF+L GGNL I    + ED G Y C ASN FG+I+S    L   ++  F   +R+P    
Sbjct: 79  RFSLMGGNLHIRHLNKEEDTGVYQCLASNSFGTIVSREANLHVAYLENFKTQRRSPVRVR 138

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
           +  G  + C PP +   + + W  +  P+ + +D R+FVS   G LY + +E  D GNY+
Sbjct: 139 EGQGVVLLCGPPPHSGELTFRWIFNDDPSSIVQDTRLFVSQKTGNLYIAKVEPSDVGNYT 198

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK--VRLECVAFG 425
           C V + V+ +   GP  PL +   ++    ++       FPE     +   V+LEC A G
Sbjct: 199 CVVTNTVTKSSVRGPPTPLVL--RADGVMGEYEPKIEVQFPEVIHVANSSTVKLECFALG 256

Query: 426 YPVPSYNWTRRG-SPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP  +W R   +P  R         +L IP  + E+ G Y C A N R        ++
Sbjct: 257 NPVPKISWRRLDDAPFGRKVKVNEAFGVLEIPYFQQENAGIYECLAENSRGRNSVRGKLT 316

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             A P   +   D        + W C+A G P  +Y W +NGE L+    P+ED  R  +
Sbjct: 317 FYASPQLIVKPQDVQKTIDDTVVWECKASGKPKPSYRWLKNGESLD----PMED--RIEV 370

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            D VLTIR LN   D  MYQC A+N+    + +AQLRVL + P F +  ++++T A +GG
Sbjct: 371 NDGVLTIRSLN-LVDVGMYQCVAENKYGRIFCNAQLRVLAIAPDFSQNLVKAQTLARQGG 429

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           +V + C P  +P+    W+K    I    R  + +NG+L +S V++ D+G+Y+C A N  
Sbjct: 430 DVLMECKPRMSPRGVISWRKGEEAIRESHRVTVLDNGSLRLSNVTKADAGVYTCVARNQF 489

Query: 665 GMDESKGRL-----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
           G+  S G L      V+  P+ +      + +    ++ L C    +  LD+ + W  N 
Sbjct: 490 GVASSAGSLSVKDATVITSPAGH------LDVTLGESIVLPCQVSHDPTLDLKFTWFFNE 543

Query: 720 --VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
             +  G       E      DGG++ I N     AG+Y C V++ V  IS  T V+V GP
Sbjct: 544 QLIHFGGRGAY-FEKAGGRSDGGIM-IRNIQLKHAGKYTCAVQTKVDSISIATDVVVRGP 601

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P   QV+E+ +T+AT+ W  G  N  PI  Y I ART ++  W       +    + 
Sbjct: 602 PGPPLDCQVIEMTETTATLSWRPGTDNHSPILSYTIQARTPFSLGW-----QAVTTVPEL 656

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+K ++    L PW  YEF+V+A N +G GEPS PS +  T    P   P+R+ GGGG
Sbjct: 657 PKGKKLSASVFELSPWVEYEFRVLATNSIGTGEPSKPSKKARTKETSPRVTPARVNGGGG 716

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WEP+P E Q+ P   Y + +R      +    +    +    V +  S   +
Sbjct: 717 GRSELVITWEPVPEELQSGPGFGYVVAFRPLGAPGWMQAAVTS-PDASKYVFKNESIPPF 775

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + Y+VKV   N+ G GP S V
Sbjct: 776 SPYQVKVGVYNNKGEGPFSPV 796



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 9/130 (6%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P+S Y+ KV   N  G G P SP     +  ++P +AP+R+        ++ +SW+PLP 
Sbjct: 774 PFSPYQVKVGVYNNKGEG-PFSPVTILYSAEEEPTRAPTRLRARSISAAEIDVSWKPLPW 832

Query: 912 EKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAIN 968
                  + Y++ +WR+K   +  +  ++  GN    V+R    S  YY    + ++A N
Sbjct: 833 SNNRRRILGYELWYWREKQKQD-AATVIRTVGNKTSVVIRDLEGSSTYY----ISLRAYN 887

Query: 969 DVGPGPESEV 978
             G GP+S +
Sbjct: 888 SAGVGPQSSI 897


>gi|410899609|ref|XP_003963289.1| PREDICTED: contactin-4-like [Takifugu rubripes]
          Length = 1027

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 265/808 (32%), Positives = 388/808 (48%), Gaps = 52/808 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F KQP  VVF L       ++  SC A G+P P Y W        +L  + I P   
Sbjct: 25  GPVFTKQPGSVVFPLQHGENRKEVVFSCEAQGHPPPFYRW--------KLNDSFIHPRPG 76

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIG 307
            R++L GGNL I+   + ED G Y C  SN FG+I+S    L   ++ +F   +R P   
Sbjct: 77  SRYSLVGGNLHISRLNKDEDVGIYQCLGSNSFGTIVSREASLHVAYLEDFKTHRRNPVRV 136

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP++   + + W  + +P+FV +D R FVS   G LY + ++  D GNY
Sbjct: 137 REGQGVVLLCGPPSHSGELTFKWIFNEYPSFVTQDTRRFVSQKTGNLYIAKVDPSDVGNY 196

Query: 367 SCNVQSKVSDTGRNGPFFPL--KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V+ +   GP  PL  +V       + K    FP+  P A  +   V+LEC A 
Sbjct: 197 TCVVTNTVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPVAKSS--TVKLECFAL 254

Query: 425 GYPVPSYNWTRRG-SPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+ +W R G +   R       + +L IP  ++ED G Y C A N R        +
Sbjct: 255 GNPVPTISWRREGGASFGRKVDVNKASGVLEIPYFQMEDAGVYECVAENSRGRNLVKGKL 314

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           S  A P  T    D        L W C+A G P  +Y W +NGE L+        +DR  
Sbjct: 315 SFYAAPQLTEKPQDVQKTIDDTLVWECKANGKPKPSYRWLKNGEPLD------HMEDRLQ 368

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           + + VL I  LN   D  MYQC A+N+    +++A+LRV+ + P F +  L+++T A +G
Sbjct: 369 VNNGVLNITSLNLA-DIGMYQCVAENRHGRVFTNAELRVVAIAPDFSQNLLKAQTLARQG 427

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G+V I C P  +P+    W+K    +    R  + +NG+L IS V+R D G+Y+C A N 
Sbjct: 428 GDVLIECKPRMSPRGIISWRKGKEALRENHRVTVLDNGSLRISNVTRLDDGLYTCVARNQ 487

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VR 721
            G+  S G L+V   P+        + +    ++ L C    +  L++ + W  N   + 
Sbjct: 488 FGVASSAGSLLVKE-PTAITSPAGHLDVTVGESIVLPCQVSHDPTLELKFTWFFNEQLIH 546

Query: 722 IGNM-DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
            GN+    E          G + I N     AG+Y C V++ V  +S  T V+V GPPG 
Sbjct: 547 FGNLWAFFEKVGGVSERSSGDIMIRNIQPKHAGKYTCAVQTKVDSVSIATDVVVRGPPGP 606

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           PG  +V  V + +A++ W  GA N  PI  Y I ART +   W  V+       V +  G
Sbjct: 607 PGDCRVTAVTENTASVSWAPGADNYSPILSYAIQARTPFFLGWQAVN------TVPKLLG 660

Query: 841 RKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
            K+ S   + L PW  YEF+V+A N +G GEPS PS +  T    P   P+R+ GGGG  
Sbjct: 661 GKQLSATVIDLNPWVEYEFRVLATNSIGTGEPSRPSKKARTRETPPRVTPARVNGGGGGH 720

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 956
            +L I+WEP+P E Q+     Y + +R           L   G +  AV    +  Y   
Sbjct: 721 SELVITWEPVPEELQSGSGFGYVVAFRP----------LGAQGWMQAAVTSPEASRYVFK 770

Query: 957 ------YTEYEVKVQAINDVGPGPESEV 978
                 ++ Y+VKV   N+ G GP S V
Sbjct: 771 NESIPPFSPYQVKVGVYNNRGEGPFSPV 798



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 189/788 (23%), Positives = 296/788 (37%), Gaps = 140/788 (17%)

Query: 256 GNLIIN--DPRQVEDRGSYHCKASNKFGSIISESVQ-----LAF---GFIGEFNLK---R 302
           GNL I   DP    D G+Y C  +N   ++   SVQ     L     G +GE+  K   +
Sbjct: 181 GNLYIAKVDP---SDVGNYTCVVTN---TVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQ 234

Query: 303 APEIG--NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALE 359
            PE+    ++    + C    N P     W R+   +F    ++V V+   G L     +
Sbjct: 235 FPEVVPVAKSSTVKLECFALGN-PVPTISWRREGGASF---GRKVDVNKASGVLEIPYFQ 290

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRL 419
             DAG Y C     V++  R       K+  ++  Q  + P +  KT        D +  
Sbjct: 291 MEDAGVYEC-----VAENSRGRNLVKGKLSFYAAPQLTEKPQDVQKTI------DDTLVW 339

Query: 420 ECVAFGYPVPSYNWTRRGSPLPR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G P PSY W + G PL       +  N +L I ++ + D G Y C A N    + 
Sbjct: 340 ECKANGKPKPSYRWLKNGEPLDHMEDRLQVNNGVLNITSLNLADIGMYQCVAENRHGRVF 399

Query: 479 SSVTISIQA-EPNFTIPLTDKHM--DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           ++  + + A  P+F+  L           D+   C+    P    SW +  E L      
Sbjct: 400 TNAELRVVAIAPDFSQNLLKAQTLARQGGDVLIECKPRMSPRGIISWRKGKEAL------ 453

Query: 536 LEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
             +  R  + DN  ++R  N  R D  +Y C A+NQ     S+  L V        K P 
Sbjct: 454 -RENHRVTVLDNG-SLRISNVTRLDDGLYTCVARNQFGVASSAGSLLV--------KEPT 503

Query: 595 ESETYAGE-----GGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE-------- 639
              + AG      G ++ + C     P  + KF W  +  +I  G     FE        
Sbjct: 504 AITSPAGHLDVTVGESIVLPCQVSHDPTLELKFTWFFNEQLIHFGNLWAFFEKVGGVSER 563

Query: 640 -NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
            +G+++I  +    +G Y+C A        S    +V+ GP      PP           
Sbjct: 564 SSGDIMIRNIQPKHAGKYTC-AVQTKVDSVSIATDVVVRGPPG----PPG---------D 609

Query: 699 LRCSAHTEELLDVAY--------------IWTHNGVRIGNMDLNELETPNINIDGGLLEI 744
            R +A TE    V++              I       +G   +N +  P + + G  L  
Sbjct: 610 CRVTAVTENTASVSWAPGADNYSPILSYAIQARTPFFLGWQAVNTV--PKL-LGGKQLSA 666

Query: 745 TNASFADAGEYECVVKST----VGKIS--TKTTVIVEGPPGL-PGGVQVVEVHKTSATIQ 797
           T        EYE  V +T     G+ S  +K     E PP + P  V       +   I 
Sbjct: 667 TVIDLNPWVEYEFRVLATNSIGTGEPSRPSKKARTRETPPRVTPARVNGGGGGHSELVIT 726

Query: 798 W-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           W         G+  G     Y +  R      W   +  V   E  RY  + E+     +
Sbjct: 727 WEPVPEELQSGSGFG-----YVVAFRPLGAQGWMQAA--VTSPEASRYVFKNES-----I 774

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+S Y+ KV   N  G G P SP    ++  ++P +AP R+        ++ ++W+PL 
Sbjct: 775 PPFSPYQVKVGVYNNRGEG-PFSPVTTIHSAEEEPSRAPGRLRARSVSASEVEVTWKPLA 833

Query: 911 REKQNAPNIYYKIFW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 968
              +     Y   +W  R+K DT   +  ++  GN    ++R         Y V ++A N
Sbjct: 834 WSNRRILG-YELQYWSERQKPDT---ASVIRTVGNKTSVLIR--DLEGRCTYYVSLRAYN 887

Query: 969 DVGPGPES 976
             G GP+S
Sbjct: 888 SAGVGPQS 895


>gi|410910446|ref|XP_003968701.1| PREDICTED: contactin-5-like [Takifugu rubripes]
          Length = 1055

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 257/800 (32%), Positives = 383/800 (47%), Gaps = 44/800 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP+F  +P D++F L   S    + + C A G P P+Y W         L    ID  +D
Sbjct: 57  GPFFTHEPDDIIFPLD--SDEKKVVMHCEARGNPAPTYSW--------HLNQTEIDSEAD 106

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+LIIN+     D G Y CKA N FG+I+S    L F ++ +F+ K   ++  
Sbjct: 107 FRYSVVEGSLIINNASMASDYGMYQCKAENSFGTILSRDALLRFAYLNDFSRKARGDVSV 166

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 167 REGQGVVLMCTPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQHTGNLYISKVQPSDVGSY 226

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP +   A   G  VRLEC A 
Sbjct: 227 ICLVKNTVTNARVLSPPTPLTLKTDGIMGEYEPKIEVHFPPSVLAA--RGATVRLECFAL 284

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P+ A       +L IPN+++ED G Y C+A N R        + 
Sbjct: 285 GNPVPTITWRKINGNIPKKARLRKSQAVLEIPNIQLEDSGTYECKAENPRGGTAFKGHLQ 344

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P +   + D  MD+   L W C+A G P  TY W RNG       LPL  Q    I
Sbjct: 345 VYTLPQWVRMINDTQMDSGEKLRWECKATGRPRPTYRWLRNG-------LPLTSQSGVEI 397

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            +  LTI  +  + D  MYQC  +N+    YS+A+L++L   P F   P+     A  G 
Sbjct: 398 LNGELTIHKVQ-QTDSGMYQCVGENKYGAIYSNAELKILASAPVFVDNPV--WVIATLGK 454

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           +V++ C P A+PKP+ +WK+    I    R  +  N  L I   SR D G Y C A N  
Sbjct: 455 DVSLDCKPRASPKPRILWKRGDRRIQPNKRIMLLRNNTLRIVNSSRTDEGSYVCRADNQF 514

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-- 722
           G  E    L V       E  P ++ +    ++ L C A  +  LDV + W  N   I  
Sbjct: 515 GSAEMTAVLWVKDA-MRVELSPHRVEVTVGESVVLSCKATHDTSLDVTFQWFFNQRPITF 573

Query: 723 ----GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
               G+ +  + ++  ++     L I N     AG Y C  +++   ++ +  ++V GPP
Sbjct: 574 QQDGGHFEYIQTQSSTVD-----LMIRNILLRHAGRYGCRAQTSADTVTAEAELLVRGPP 628

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 838
           G PG V V E+   +AT+ WT G  N  PI+ Y + AR+ ++  W       +  + D  
Sbjct: 629 GPPGVVIVEEITDATATLSWTRGLDNHSPISTYNLQARSPFSLGW-----QTVKTDPDPV 683

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
           TG  E+++   L PW  YEF+V+A N +G G+PS PS    T    P  AP+ + GG G+
Sbjct: 684 TGDLESAMAVQLNPWVEYEFRVVATNAIGTGDPSVPSRGVRTKEAVPSVAPANVSGGNGR 743

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
             +L I WEP+  E QN     Y + +R  N T    E +    +  +   R  +    T
Sbjct: 744 RHELVILWEPVSEEFQNGEGFGYIVAFR-ANGTRGWKEKMVTSADSTMYKYRDETFPPLT 802

Query: 959 EYEVKVQAINDVGPGPESEV 978
            +EVKV   N+ G GP S+V
Sbjct: 803 PFEVKVGVYNNKGDGPFSKV 822



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 148/653 (22%), Positives = 235/653 (35%), Gaps = 94/653 (14%)

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC 421
           D+G Y C  ++      R G  F   +  ++  Q ++  N+          +G+K+R EC
Sbjct: 322 DSGTYECKAENP-----RGGTAFKGHLQVYTLPQWVRMINDTQM------DSGEKLRWEC 370

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
            A G P P+Y W R G PL   +  E  N  LTI  V+  D G Y C   N   A+ S+ 
Sbjct: 371 KATGRPRPTYRWLRNGLPLTSQSGVEILNGELTIHKVQQTDSGMYQCVGENKYGAIYSNA 430

Query: 482 TISIQAE-------PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
            + I A        P + I    K      D++  C+    P     W R    +     
Sbjct: 431 ELKILASAPVFVDNPVWVIATLGK------DVSLDCKPRASPKPRILWKRGDRRIQP--- 481

Query: 535 PLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR- 592
              ++    +++N  T+R +N  R D   Y CRA NQ  +   +A   VL +K + +   
Sbjct: 482 ---NKRIMLLRNN--TLRIVNSSRTDEGSYVCRADNQFGSAEMTA---VLWVKDAMRVEL 533

Query: 593 -PLESETYAGEGGNVTIFCNPEAAPKPKFVW---KKDGNIIGSGGRRKIFENG----NLL 644
            P   E   GE   ++     + +    F W   ++       GG  +  +      +L+
Sbjct: 534 SPHRVEVTVGESVVLSCKATHDTSLDVTFQWFFNQRPITFQQDGGHFEYIQTQSSTVDLM 593

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I  +    +G Y C A        ++  L+V   P      PP + I           + 
Sbjct: 594 IRNILLRHAGRYGCRAQTSADTVTAEAELLVRGPPG-----PPGVVIVEEITDATATLSW 648

Query: 705 TEELLDVAYIWTHNGVRIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKST 762
           T  L + + I T+N        L    ++T    + G L            EYE  V   
Sbjct: 649 TRGLDNHSPISTYNLQARSPFSLGWQTVKTDPDPVTGDLESAMAVQLNPWVEYEFRV--- 705

Query: 763 VGKISTKTTVIVEGPPGLPG-GVQVVEVHKTSATIQWTDGATNGR---------PITH-- 810
                  T  I  G P +P  GV+  E   + A    + G  NGR         P++   
Sbjct: 706 -----VATNAIGTGDPSVPSRGVRTKEAVPSVAPANVSGG--NGRRHELVILWEPVSEEF 758

Query: 811 -------YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
                  Y +  R N    W    + V   +   Y  R E        P + +E KV   
Sbjct: 759 QNGEGFGYIVAFRANGTRGW--KEKMVTSADSTMYKYRDE-----TFPPLTPFEVKVGVY 811

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N  G G P S     ++   +P +APS +        ++ ++W+P P   +  P  Y   
Sbjct: 812 NNKGDG-PFSKVVIIHSAEGEPKEAPSDVKAYSISSSEIRLTWKPSPGPGK--PKGYEVC 868

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +W++    E   +         I +  +      T Y+  V   N VG GP S
Sbjct: 869 YWKEMEQQEAGKKQRTVKNETTIILTGLEGN---TRYQFTVNGFNSVGQGPAS 918


>gi|348510469|ref|XP_003442768.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
          Length = 1012

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 255/808 (31%), Positives = 393/808 (48%), Gaps = 56/808 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F ++P+D +F +S       + ++C A G P P Y W        ++    I+  SD
Sbjct: 24  GPVFTQEPSDSIFPMSTDD--KQVFINCKAKGNPPPRYRW--------KVDGRDINTDSD 73

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
             ++L  GNL+I++P  +   G Y C A+N FG+++S   ++ F F+  F+ K    +  
Sbjct: 74  PNYSLVEGNLLISNPHVINHGGVYQCIATNTFGTVVSREAKVQFAFLQNFSSKTRNTVSV 133

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +     + C PP +Y  + Y W  +   NF+++D R F+S   G LY + +E  DAGNY
Sbjct: 134 REGQAVVLLCGPPPHYGEIKYSWVFNGQRNFLQQDARRFISQKTGNLYIAKVEASDAGNY 193

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V++ ++++       P+ V       +   K    FP T   +   G  V+LEC A 
Sbjct: 194 TCAVRNMMTNSTVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTLHVS--KGSSVKLECFAL 251

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR--SALESSV 481
           G PVPS +W R  G+PLP      + + +L IP  + ED G Y C A N R  +     +
Sbjct: 252 GNPVPSISWRRADGNPLPGKIKINHSSGVLEIPYFRPEDAGMYECVAENSRGRNVARGQL 311

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
                    +   L D HM   A+L W C+A G P  TY W +NG+ L +E       +R
Sbjct: 312 IFHSAEHLQWVQTLKDAHMAIDANLQWECKAIGKPRPTYRWLKNGQSLKAE-------ER 364

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             ++   LTI  ++   D  MYQC A+N+  + Y+SA+L+V+   P F +RP++  T   
Sbjct: 365 IHLEAGRLTIPKISLS-DSGMYQCVAENEHGSVYASAELKVVASPPDFTRRPVKKSTVIQ 423

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
            GG V + C P A+P+    W ++G + +    RR I E+G L I+ +S+ D G Y+C A
Sbjct: 424 RGGEVVLECRPHASPRATISWWREGGMHLKDSERRTIMEDGTLRITNISKSDGGRYTCVA 483

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
            N  G   S G L+V   P+     P  +  +  +++ L C   ++  L   + W  NG 
Sbjct: 484 RNRFGTSSSTGSLVVKE-PTKIIVPPLSLDASVGQSIVLPCEVSSDSSLSPIFKWFFNGK 542

Query: 721 RIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
            I   D N  E   + I GG    L + N     +G+Y C+V + V  +S    +IV GP
Sbjct: 543 AI---DFNRQEHFEM-IGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGP 598

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P G+ V ++  T+  + W  G  N  P+T Y + ART ++  W       +    D 
Sbjct: 599 PGPPEGLVVTDITDTTVQLSWGSGPDNHSPVTKYMVQARTPFSIGW-----QTVRTVPDS 653

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+   +    L PW  YEF+V+A N +G GEPS+PS Q  T A  P  AP  + GGGG
Sbjct: 654 VPGQMMHATVKELNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPINVSGGGG 713

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE-------YGNVGIAVVR 950
             G+L I WEP+P E+Q+  +  Y + +R    + +    L         Y N  IA + 
Sbjct: 714 ARGELVIMWEPVPEEQQSGEDFGYVVAFRPLGSSTWIQTVLASPDASRYIYRNDSIAPLS 773

Query: 951 IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +        +EV V   N++G GP S V
Sbjct: 774 L--------FEVTVGVYNNMGEGPFSRV 793



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 148/654 (22%), Positives = 249/654 (38%), Gaps = 68/654 (10%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
            G L        DAG Y C  ++     GRN     L      + Q ++       T  +
Sbjct: 278 SGVLEIPYFRPEDAGMYECVAEN---SRGRNVARGQLIFHSAEHLQWVQ-------TLKD 327

Query: 410 APKAGDK-VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
           A  A D  ++ EC A G P P+Y W + G  L            LTIP + + D G Y C
Sbjct: 328 AHMAIDANLQWECKAIGKPRPTYRWLKNGQSLKAEERIHLEAGRLTIPKISLSDSGMYQC 387

Query: 469 RASNDRSALESSVTISIQAEP-NFTIPLTDKH--MDNQADLTWTCEAFGVPDVTYSWFRN 525
            A N+  ++ +S  + + A P +FT     K   +    ++   C     P  T SW+R 
Sbjct: 388 VAENEHGSVYASAELKVVASPPDFTRRPVKKSTVIQRGGEVVLECRPHASPRATISWWRE 447

Query: 526 GELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G       + L+D +R  I +D  L I  ++ + D   Y C A+N+  T  S+  L V+ 
Sbjct: 448 G------GMHLKDSERRTIMEDGTLRITNIS-KSDGGRYTCVARNRFGTSSSTGSL-VVK 499

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE----- 639
                   PL  +   G+   +    + +++  P F W  +G  I    R++ FE     
Sbjct: 500 EPTKIIVPPLSLDASVGQSIVLPCEVSSDSSLSPIFKWFFNGKAI-DFNRQEHFEMIGGG 558

Query: 640 -NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L++  +    SG Y C          +   LIV   P   E L   +T      +Q
Sbjct: 559 FAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPPGPPEGL--VVTDITDTTVQ 616

Query: 699 LRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
           L   +  +    V    +       IG      + T   ++ G ++  T        +YE
Sbjct: 617 LSWGSGPDNHSPVTKYMVQARTPFSIG---WQTVRTVPDSVPGQMMHATVKELNPWVDYE 673

Query: 757 --CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGA 802
              V  ++VG         +I TK  V    P  + GG       +    I W    +  
Sbjct: 674 FRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPINVSGGGGA----RGELVIMWEPVPEEQ 729

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            +G     Y +  R   +STW      +   +  RY  R ++     + P S +E  V  
Sbjct: 730 QSGEDFG-YVVAFRPLGSSTWIQTV--LASPDASRYIYRNDS-----IAPLSLFEVTVGV 781

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N +G G P S   +  +  ++P +APSR         ++ + WEP+P    +   + Y+
Sbjct: 782 YNNMGEG-PFSRVVRVFSAEEEPSEAPSRAWARAVSASEIEVFWEPVPPRSNSEKIVAYE 840

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + + +    + +++ ++      +    +      T Y + V+A N  G GP S
Sbjct: 841 VLFWEGGLEQSEADRVRVINCTAL----LSGLKGSTRYLISVRAQNSAGLGPCS 890


>gi|351695049|gb|EHA97967.1| Contactin-3 [Heterocephalus glaber]
          Length = 1021

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 248/742 (33%), Positives = 373/742 (50%), Gaps = 24/742 (3%)

Query: 243 IDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
           ID   + R+ L+GGNL++ +P +  D GSY C A+N FG+++S   +L F ++  F  K 
Sbjct: 62  IDMSMEHRYKLNGGNLVVFNPNRNWDTGSYQCFATNSFGTVVSREAKLQFAYLENFKTKM 121

Query: 303 APEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQ 360
              +   +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E 
Sbjct: 122 RSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEP 181

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVR 418
            D GNY+C V S V++    G   PL +       +   K    FP+T P A   G  V+
Sbjct: 182 SDVGNYTCVVMSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGATVK 239

Query: 419 LECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC A G PVP  NW R  G P P       FN +L IP  + ED G Y C A N R   
Sbjct: 240 LECFALGNPVPQINWRRSDGMPFPAKIKLRKFNGVLEIPAFQQEDAGSYECIAENSRGKN 299

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
            +   ++  A+P++   + D  M  +  + W  +A G P  +Y W +NGE L  E     
Sbjct: 300 VARGRLTYYAKPHWVQFIKDMEMAVEDSIYWEFQASGKPKPSYRWLKNGEALVLE----- 354

Query: 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE 597
             +R  I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P+++ 
Sbjct: 355 --ERIQIENGALTISNLN-VTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKNPMKNL 411

Query: 598 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
                G  V + C P A+P+    WKK   ++    R    ++G L I+ V++ DSG Y+
Sbjct: 412 VQVQVGSLVNLDCKPRASPRALSSWKKGNTVVQEHERISFLKDGGLKIANVTKADSGTYT 471

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           CTA N  G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  
Sbjct: 472 CTAENQFGKANGTTLLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYF 530

Query: 718 NGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           NG       D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G
Sbjct: 531 NGALTDFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTRVDSVSSAAELIVRG 589

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
            PG P  V++ E+  T+A + W +G  N  P+T Y I ART ++  W  V+   + + +D
Sbjct: 590 SPGPPENVKIDEITDTTAQLSWKEGTDNHSPVTSYAIQARTPFSVGWQTVT--TVPEVID 647

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
              G+   +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGG
Sbjct: 648 ---GKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGG 704

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
           G   +L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   
Sbjct: 705 GSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIMP 763

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
           ++ YEVKV   N+ G GP S V
Sbjct: 764 FSPYEVKVGVYNNKGEGPFSPV 785



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 160/657 (24%), Positives = 247/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L   A +Q DAG+Y C  ++     G+N     L  +   ++ Q      F K   
Sbjct: 271 FNGVLEIPAFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQ------FIKDME 321

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  E  A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 322 MAVE--DSIYWEFQASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 379

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+       +  Q    +   C+    P    SW + 
Sbjct: 380 IAENKHGLIYSSAELKVVASAPDFSKNPMKNLVQVQVGSLVNLDCKPRASPRALSSWKKG 439

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
             ++       E +   F++D  L I  +  + D   Y C A+NQ   + +   L V+T 
Sbjct: 440 NTVVQ------EHERISFLKDGGLKIANVT-KADSGTYTCTAENQFG-KANGTTLLVVTE 491

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 492 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGG 549

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +  KI     
Sbjct: 550 SS---SGDLMIRNIQLKHSGKYVCMVQTRVDSVSSAAELIVRGSPGPPENV--KIDEITD 604

Query: 695 RNLQLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 752
              QL     T+    V    I       +G   +  +  P + IDG     T       
Sbjct: 605 TTAQLSWKEGTDNHSPVTSYAIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPW 661

Query: 753 GEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT-- 799
            EYE   V  + +G         K+ T+  V    P  + GG       ++   I W   
Sbjct: 662 VEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPV 717

Query: 800 -DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
            +   NG     Y +  R    +TW  +   V   +  RY  R E+     ++P+S YE 
Sbjct: 718 PEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IMPFSPYEV 769

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           KV   N  G G P SP     +  ++P  APS++        ++ ++W  +P +  N   
Sbjct: 770 KVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSAHSVSSSEIEVAWNTIPWKLSNGRL 828

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGP 974
           + Y++ +      E  S  +K  G+   A +R + S     EY   V+A N  G GP
Sbjct: 829 LGYEVQYWNNGAEEESSSKVKVAGHETSARLRGLKSNL---EYYTAVRAYNSAGAGP 882



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 117/305 (38%), Gaps = 41/305 (13%)

Query: 218 AGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKAS 277
           A G P PSY W K     + LV        ++R  +  G L I++   V D G + C A 
Sbjct: 334 ASGKPKPSYRWLKNG---EALVL-------EERIQIENGALTISN-LNVTDSGMFQCIAE 382

Query: 278 NKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYYWARDYFP 336
           NK G I S +         +F+      +     G  +  D  P   P     W +    
Sbjct: 383 NKHGLIYSSAELKVVASAPDFSKNPMKNLVQVQVGSLVNLDCKPRASPRALSSWKKGN-- 440

Query: 337 NFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ 396
             V+E +R+    DG L  + + + D+G Y+C  +++      NG    +   P    + 
Sbjct: 441 TVVQEHERISFLKDGGLKIANVTKADSGTYTCTAENQFGKA--NGTTLLVVTEPT---RI 495

Query: 397 LKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRRGSPLPRNAYFENFNRI-- 452
              P+N   +       G+ V L C     P+    + W   G+         +F ++  
Sbjct: 496 TLAPSNMDVS------VGESVILPCQVQHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGG 549

Query: 453 -----LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP----NFTIPLTDKHMDNQ 503
                L I N++++  G+Y+C       ++ S+  + ++  P    N  I   D+  D  
Sbjct: 550 SSSGDLMIRNIQLKHSGKYVCMVQTRVDSVSSAAELIVRGSPGPPENVKI---DEITDTT 606

Query: 504 ADLTW 508
           A L+W
Sbjct: 607 AQLSW 611



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 100/254 (39%), Gaps = 29/254 (11%)

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMYQCRAKNQLKTRYS-SAQLRVLTL 585
           LN   + +  + RY +    L +   NP R  D   YQC A N   T  S  A+L+   L
Sbjct: 57  LNGSNIDMSMEHRYKLNGGNLVV--FNPNRNWDTGSYQCFATNSFGTVVSREAKLQFAYL 114

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENG 641
           + +FK + + S     EG  V + C P          +++ +  + +    RR +  E G
Sbjct: 115 E-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETG 172

Query: 642 NLLISPVSRDDSGIYSCT----ATNVHGMDESKGRLIVLHG------PSYYEQLPPKITI 691
           +L I+ V   D G Y+C      TN   +      ++   G      P    Q P  +  
Sbjct: 173 HLYIAKVEPSDVGNYTCVVMSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPA 232

Query: 692 AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 751
           A    ++L C A    +  + +  +        + L +          G+LEI      D
Sbjct: 233 AKGATVKLECFALGNPVPQINWRRSDGMPFPAKIKLRKFN--------GVLEIPAFQQED 284

Query: 752 AGEYECVVKSTVGK 765
           AG YEC+ +++ GK
Sbjct: 285 AGSYECIAENSRGK 298


>gi|449481132|ref|XP_004177255.1| PREDICTED: LOW QUALITY PROTEIN: contactin-1 [Taeniopygia guttata]
          Length = 1050

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 260/793 (32%), Positives = 395/793 (49%), Gaps = 42/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    ++++C A   P P+Y W   ++  D         L+ 
Sbjct: 46  GPVFEEQPIDTIY--PEESSDGQVSMNCRARAVPFPTYRWKLNNWDID---------LTK 94

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
           +R+++ GG L+IN+P +  D G Y C  SN FG++ S    L+FG++  F  +   E+  
Sbjct: 95  ERYSMVGGRLVINNPEKSRDAGKYVCVVSNIFGTVRSSEATLSFGYLDPFPPEERYEVKV 154

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + C+PP +YP  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 155 REGVGAVLLCEPPYHYPDDLSYRWLLNEFPVFIALDKRRFVSQTNGNLYIANVEASDKGN 214

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P S+  ++ +P +    F +     G  V LEC A 
Sbjct: 215 YSCFVSSPSITKSVFSKFIPL--IPQSDRAKV-YPADIKVKFKDTYALLGQNVTLECFAL 271

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W++   PLP +A       +L I N++ ED+G Y C A N +   +    + 
Sbjct: 272 GNPVPELRWSKYLEPLPASAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVY 331

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D   D  +DL W C A G P  T  W +NG       L ++       
Sbjct: 332 VQAAPEWVEHINDTERDIGSDLYWPCVATGKPIPTIRWLKNGASFRKGELRMQS------ 385

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               LT        D  MYQC A+N     Y++A+L+++   P+F+  P++ +  A +GG
Sbjct: 386 ----LTFD------DAGMYQCIAENMHGIIYANAELKIVASPPTFELNPMKKKILAAKGG 435

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K   ++ +G R +I+++G+L I  V++ D G Y+C A N  
Sbjct: 436 RVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCFAENNR 495

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L +    +     P  + +    N  ++C A  +  LD+ +IW+ NG  I  
Sbjct: 496 GKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDF 554

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              +E    N+ I   G L I N     AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 555 EKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMCTAQTIVDNSSASADLVVRGPPGPPGG 614

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           ++V E+  T+  + W+ G  N  PI+ Y I ++T  +  W +        +     G  E
Sbjct: 615 IRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAK-----TDPSDIEGNME 669

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           ++    L+PW  YEF++IA N LG GEPS PSP+  T    P  APS +GGGGG   +L+
Sbjct: 670 SATVIDLIPWMEYEFRIIATNTLGTGEPSMPSPRIRTEGAPPNVAPSDVGGGGGSNRELT 729

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W  L RE     N  Y + ++   + E++  T      +G  V +  S    T+Y+VK
Sbjct: 730 ITWMLLSREYHYGNNFGYIVAFKPFGEKEWRRVTXTN-PEIGRYVHKDESMPPSTQYQVK 788

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 789 VKAFNNKGDGPFS 801


>gi|410908411|ref|XP_003967684.1| PREDICTED: contactin-1a-like [Takifugu rubripes]
          Length = 1002

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 262/799 (32%), Positives = 391/799 (48%), Gaps = 51/799 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S    IT++C A   P  +Y+W K++   D    +       
Sbjct: 23  GPVFEEQPVETIY--PEESPEAKITMNCRARASPPATYKWRKDNKDIDFSAES------- 73

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
             F+L GGNL+I+DP + +  G+Y C A+N FG++IS    + FG++  F+ +    +  
Sbjct: 74  SHFSLMGGNLVISDPVKEQHAGNYCCLAANTFGTVISREASVQFGYLDLFSSEERESVHV 133

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGN 365
            +  G  + C PP +YP  +++ W  + FP F+  DKR FVS   G LY S ++  D+GN
Sbjct: 134 KEGQGAVLLCAPPPHYPAELSFRWILNEFPTFIPLDKRRFVSQITGNLYISKVDSSDSGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-AGDKVRLECVAF 424
           YSC   S          + PL   P S     K+P +    FP+     G  + LEC A 
Sbjct: 194 YSCIASSSSISKSVFSNYIPL--VPLSERHNRKYPADLNVKFPDTTALVGQNITLECFAL 251

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +    LP N         L + NV+ ED G Y C A N +     +  +S
Sbjct: 252 GNPVPEIMWKKLDGELPPNHEVRTAGAHLHLHNVQFEDSGTYQCEAVNSKGKDYHTALLS 311

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++A P +   +T+   D  +  T +C A G P+    W +NGELL          DR  +
Sbjct: 312 VEAFPEWVEHITNTEKDLGSRYTMSCVASGKPEPQIRWMKNGELL----------DRDEM 361

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
             N LT        D  MYQC A+N+    Y++A+LRV    P+F+  PL+    A   G
Sbjct: 362 SFNSLTF------EDSGMYQCVAENRHGVLYANAELRVFACAPTFEHNPLK-RVLAPRNG 414

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKP F W KD  ++ +  R  I+E+G+L I  V+R D G Y+C A N  
Sbjct: 415 RVVIECRPKAAPKPTFTWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRYTCFAENDR 474

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G   S G L+VL   +     P    I A  N  ++C+A  +  LD+ +IW+ +   I  
Sbjct: 475 GKANSTGSLLVLES-TKINLAPTNADIKAGENALMQCAALHDPSLDITFIWSLDDHVIDV 533

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             D    E        G L I NA    AG Y C+ ++ +   +    ++V GPPG PGG
Sbjct: 534 QTDSQHYERGTNGSSNGALLIKNAQLKHAGRYTCMAQTPIDNATESAQLVVRGPPGAPGG 593

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYTGRK 842
           V+V+   +   T+QW+ GA N  PI+ Y I  R  ++   W   +      EV+   G  
Sbjct: 594 VRVMNKTEKKVTLQWSRGADNHSPISKYSIQYRDAYSGDEWKKAATSP--PEVE---GNA 648

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E +    L PW+ YEF+V A N LG GEPSSP+ +  T    P  APS IGGGGG   +L
Sbjct: 649 ETATVVDLFPWTEYEFRVFAANTLGTGEPSSPTAKEKTLDAVPVVAPSNIGGGGGTSREL 708

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEYGNVGIAVVRIPSEFYY 957
           +I+W P+  +     N  Y + +R  ++ E++   +     + Y +  +A+  +      
Sbjct: 709 TITWTPVQPQHYYGSNFGYIVAFRPFDNKEWRKVMVADPLARSYIHKDLALPPL------ 762

Query: 958 TEYEVKVQAINDVGPGPES 976
           T+++VKV+A N  G GP S
Sbjct: 763 TKFQVKVKAFNSKGEGPFS 781



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 155/656 (23%), Positives = 244/656 (37%), Gaps = 86/656 (13%)

Query: 353 LYFSALEQIDAGNYSCN-VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           L+   ++  D+G Y C  V SK  D   +     ++ FP    + ++   N  K      
Sbjct: 280 LHLHNVQFEDSGTYQCEAVNSKGKD--YHTALLSVEAFP----EWVEHITNTEKDL---- 329

Query: 412 KAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRAS 471
             G +  + CVA G P P   W + G  L R+    +FN      ++  ED G Y C A 
Sbjct: 330 --GSRYTMSCVASGKPEPQIRWMKNGELLDRDEM--SFN------SLTFEDSGMYQCVAE 379

Query: 472 NDRSALESSVTISIQA-EPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           N    L ++  + + A  P F   PL          +   C     P  T++W ++ ELL
Sbjct: 380 NRHGVLYANAELRVFACAPTFEHNPLKRVLAPRNGRVVIECRPKAAPKPTFTWSKDTELL 439

Query: 530 NSETLPLEDQDRYFI-QDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
           ++ T       R FI +D  L I  LN  R D   Y C A+N      S+  L VL    
Sbjct: 440 SNST-------RVFIWEDGSLEI--LNVTRADEGRYTCFAENDRGKANSTGSLLVLE-ST 489

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------N 640
                P  ++  AGE   +      + +    F+W  D ++I      + +E       N
Sbjct: 490 KINLAPTNADIKAGENALMQCAALHDPSLDITFIWSLDDHVIDVQTDSQHYERGTNGSSN 549

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G LLI       +G Y+C A           +L+V   P     +  ++     + + L+
Sbjct: 550 GALLIKNAQLKHAGRYTCMAQTPIDNATESAQLVVRGPPGAPGGV--RVMNKTEKKVTLQ 607

Query: 701 CSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 759
            S   +    ++ Y   +     G+ +  +  T    ++G     T        EYE  V
Sbjct: 608 WSRGADNHSPISKYSIQYRDAYSGD-EWKKAATSPPEVEGNAETATVVDLFPWTEYEFRV 666

Query: 760 -----------KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD-------G 801
                       S   K  T   V V  P  + GG           TI WT        G
Sbjct: 667 FAANTLGTGEPSSPTAKEKTLDAVPVVAPSNIGGGGGT----SRELTITWTPVQPQHYYG 722

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
           +  G     Y +  R   N  W  V   ++   + R    K+ +    L P + ++ KV 
Sbjct: 723 SNFG-----YIVAFRPFDNKEWRKV---MVADPLARSYIHKDLA----LPPLTKFQVKVK 770

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N  G G P S +    +  D P +APS   G      +  +SW PLP   Q++ + Y 
Sbjct: 771 AFNSKGEG-PFSLTAVIYSAQDAPSEAPSGFEGKALSATEAFVSWLPLP---QDSIDGYQ 826

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
             FWR   ++E  ++T+           R+      + Y ++V+  N  G GP SE
Sbjct: 827 VKFWRNHEESEGGAQTVTASNT--DTNTRLDGMKPNSNYLIEVRGYNTAGYGPPSE 880


>gi|348543227|ref|XP_003459085.1| PREDICTED: contactin-2-like [Oreochromis niloticus]
          Length = 1039

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 271/809 (33%), Positives = 390/809 (48%), Gaps = 58/809 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP+ +++          +TLSC A   P  +Y W         LV     PL+ 
Sbjct: 31  GPVFEEQPSSLIYPEGLTE--GKVTLSCQARANPAAAYRW---------LVNGTAVPLNL 79

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R+TL  G L+I+ P  + D GSY C A N+ G+IIS +  L FG++ +F    R+P+  
Sbjct: 80  DRYTLVAGTLVISSPDPIRDTGSYQCLAINRCGTIISRAANLKFGYLHDFPPDGRSPQTI 139

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV-EEDKRVFVS-YDGALYFSALEQIDAGN 365
           N+  G  + C PP +YP ++Y W  + FPNF+ ++D R FVS   G LY +  E  D  N
Sbjct: 140 NEGQGMFLACQPPPHYPALSYRWFLNEFPNFIRKDDGRWFVSQVTGNLYLAKAEPNDTAN 199

Query: 366 YSC--NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y C   +  +VS          L V P +N ++                AG   +LEC A
Sbjct: 200 YFCFTTINMEVSTKSTFSKANQLTVVPDANPRKSAPTIKVRFLADTYALAGHTAQLECFA 259

Query: 424 FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           +G PVP   W +    +P  A        LT+P +  +D+G Y C A N          I
Sbjct: 260 YGNPVPKVRWRKVDGLMPSKAGPTVEGPTLTLPELSFDDEGIYECEAYNSEGRDTYQGRI 319

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           ++QA+P +   +TD  ++  +DL W+C A G P  +  W RNG+       PL  QDR  
Sbjct: 320 NVQAQPEWLQVMTDSEVEISSDLQWSCVAAGKPRPSVRWLRNGQ-------PLSTQDR-- 370

Query: 544 IQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
           ++ N + +R +N    D  MYQC A+N+  T YS+A+LRV    P F+  P+     A  
Sbjct: 371 VEVNGVHLRIINLALEDSGMYQCVAENKHGTIYSTAELRVQVQAPDFRLNPVRKLIPAAR 430

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG V I C P AAPKP   W +   ++ +  R  +  +G L I  +SR D G Y+C A N
Sbjct: 431 GGQVMIDCRPRAAPKPSLFWSRGTELLTNSSRITVTPDGILWIYNISRADEGKYTCFAEN 490

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G   S G L V    +     P    I    N+ L+C A  +  +D+ + W+ NGV  
Sbjct: 491 YLGKANSTGHLSV-RDATKITLAPSNADINQGENVTLQCHASHDAAMDLTFTWSLNGVL- 548

Query: 723 GNMDLNELETPNINIDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             +DL     P   ++G    G L I  A  + AG Y C  ++ V   S    ++V GPP
Sbjct: 549 --LDLENSAGPYHRVEGKENTGDLLIVRAQLSQAGIYVCTAQTVVDSASASARLVVRGPP 606

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 838
           G PGG+ V  V +TS  ++W+ G  N  PI  Y I+ R+  +S W  +    +  E    
Sbjct: 607 GPPGGLLVKNVAETSVELRWSCGYDNHSPIGKYVIMGRSPLSSEWRKMRTDPVNIE---- 662

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
            G  E++    L+PW+ YEF+VIA N LG GEPS PS    T    P  APS + GGGG 
Sbjct: 663 -GNAESARVIGLIPWTDYEFRVIASNILGSGEPSMPSHIIRTLQAAPTVAPSGLAGGGGD 721

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-- 956
             +L ++W P+ RE QN     Y + +RKK  + +            + V R+ S  Y  
Sbjct: 722 RDELIVTWTPMAREYQNGDGFGYILAFRKKGTSSWTE----------VRVPRVESSRYVY 771

Query: 957 -------YTEYEVKVQAINDVGPGPESEV 978
                  YT +EVK++A N  G GP S+V
Sbjct: 772 YNSSLAAYTPFEVKIKAYNHKGEGPFSQV 800



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 147/597 (24%), Positives = 224/597 (37%), Gaps = 76/597 (12%)

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           ++  CVA G P PS  W R G PL      E     L I N+ +ED G Y C A N    
Sbjct: 342 LQWSCVAAGKPRPSVRWLRNGQPLSTQDRVEVNGVHLRIINLALEDSGMYQCVAENKHGT 401

Query: 477 LESSVTISIQAE-PNFTIPLTDKHM--DNQADLTWTCEAFGVPDVTYSWFRNGELLNSET 533
           + S+  + +Q + P+F +    K +       +   C     P  +  W R  ELL    
Sbjct: 402 IYSTAELRVQVQAPDFRLNPVRKLIPAARGGQVMIDCRPRAAPKPSLFWSRGTELLT--- 458

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLKPS 588
               +  R  +  + +   Y     D   Y C A+N L    S+  L V     +TL PS
Sbjct: 459 ----NSSRITVTPDGILWIYNISRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPS 514

Query: 589 FKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVWKKDG------NIIGSGGRRKIFEN 640
                        +G NVT+ C+   +AA    F W  +G      N  G   R +  EN
Sbjct: 515 --------NADINQGENVTLQCHASHDAAMDLTFTWSLNGVLLDLENSAGPYHRVEGKEN 566

Query: 641 -GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+LLI       +GIY CTA  V     +  RL+V   P     L  K        L+ 
Sbjct: 567 TGDLLIVRAQLSQAGIYVCTAQTVVDSASASARLVVRGPPGPPGGLLVKNVAETSVELRW 626

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--------GLLEITNASFAD 751
            C       +    I   + +   + +  ++ T  +NI+G        GL+  T+     
Sbjct: 627 SCGYDNHSPIGKYVIMGRSPL---SSEWRKMRTDPVNIEGNAESARVIGLIPWTDY---- 679

Query: 752 AGEYECVVKSTVGK---------ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
             E+  +  + +G          I T        P GL GG       +    + WT  A
Sbjct: 680 --EFRVIASNILGSGEPSMPSHIIRTLQAAPTVAPSGLAGGGG----DRDELIVTWTPMA 733

Query: 803 ---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
               NG     Y +  R    S+W  V        V R    +     + L  ++ +E K
Sbjct: 734 REYQNGDGFG-YILAFRKKGTSSWTEV-------RVPRVESSRYVYYNSSLAAYTPFEVK 785

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           + A N  G G P S     ++  ++P   PS I        ++ +SWEP+ +   N    
Sbjct: 786 IKAYNHKGEG-PFSQVAVVHSAEEEPTVGPSSINATALSAFEIQVSWEPVQQLSANGILR 844

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            Y+I + ++++ E  ++ ++  G    A  R+      T Y V V A N  G GP S
Sbjct: 845 GYEIRYWRQHEREAAADRVRTAGLEPTA--RVSGLRPSTRYHVAVLAYNSAGTGPPS 899


>gi|449272003|gb|EMC82133.1| Contactin-1, partial [Columba livia]
          Length = 946

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 260/793 (32%), Positives = 395/793 (49%), Gaps = 42/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    ++++C A   P P+Y W   ++  D         L+ 
Sbjct: 2   GPVFEEQPIDTIY--PEESSDGQVSMNCRARAIPFPTYRWKLNNWDID---------LTK 50

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GG L+IN+P +  D G Y C  SN FG++ S    L+FG++  F  +   E+  
Sbjct: 51  DRYSMVGGRLVINNPEKSRDAGKYVCVVSNIFGTVRSYEATLSFGYLDPFPPEERYEVKV 110

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + C+PP +YP  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 111 REGVGAVLLCEPPYHYPDDLSYRWLLNEFPVFIALDKRRFVSQTNGNLYIANVEASDKGN 170

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P S+  ++ +P +    F +     G  V LEC A 
Sbjct: 171 YSCFVSSPSITKSVFSKFIPL--IPQSDRAKV-YPADIKVKFKDTYALLGQNVTLECFAL 227

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W++   P+P +A       +L I N++ ED+G Y C A N +   +    I 
Sbjct: 228 GNPVPELRWSKYLEPMPASAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARIY 287

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D   D  +DL W C A G P  T  W +NG       L ++       
Sbjct: 288 VQAAPEWVEHINDTEKDIGSDLYWPCVATGKPMPTIRWLKNGASFRKGELRMQS------ 341

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               LT        D  MYQC A+N     Y++A+L+++   P+F+  P++ +  A +GG
Sbjct: 342 ----LTFD------DAGMYQCIAENTHGIIYANAELKIVASPPTFELNPMKKKILAAKGG 391

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K   ++ +G R +I+++G+L I  +++ D G Y+C A N  
Sbjct: 392 RVIIECKPKAAPKPKFSWSKGTELLVNGTRIRIWDDGSLEIVNITKLDEGRYTCFAENNR 451

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L +    +     P  + +    N  ++C A  +  LD+ +IW+ NG  I  
Sbjct: 452 GKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDF 510

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              +E    N+ I   G L I N     AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 511 EKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 570

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           ++V E+  T+  + W+ G  N  PI+ Y I ++T  +  W +        E     G  E
Sbjct: 571 IRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTDPSDIE-----GNME 625

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           ++    L+PW  YEF++IA N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 626 SATVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELT 685

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++   + E++  T+     +G  V +  S    T+Y+VK
Sbjct: 686 ITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPSTQYQVK 744

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 745 VKAFNNKGDGPFS 757


>gi|291408742|ref|XP_002720673.1| PREDICTED: contactin 6 [Oryctolagus cuniculus]
          Length = 1117

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 264/797 (33%), Positives = 377/797 (47%), Gaps = 38/797 (4%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P F ++P DV F L   S  +++ LSC A GYP P Y W        R     ID    +
Sbjct: 114 PAFTQEPRDVTFPLG--SSASEVILSCAAAGYPAPHYRW--------RHNGTAIDFAVSE 163

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGN 308
           R+ L GG+L I  PR  +D G Y C A+N  G+ +S   +L F +I +F  K R+     
Sbjct: 164 RYRLEGGSLAIRSPRTDQDAGVYQCLATNLLGTTVSREARLQFAYIEDFEAKARSAVSVR 223

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
           +  G  + C  P +   ++Y WA +     V ED+R F+S   G LY + ++  D GNY+
Sbjct: 224 EGQGVVLLCGRPPHVGDLSYAWAFNDSLLSVHEDRRRFISQQTGNLYIAKVQPSDVGNYT 283

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFG 425
           C V ++ +     GP  PL         +   K    FP T P A  +   V+LEC A G
Sbjct: 284 CFVTNREARRSVRGPPSPLVQRADGVMGEYEPKIEVRFPDTVPAAKDS--SVKLECFALG 341

Query: 426 YPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP  +W R  GSPLP  A F     +L IPN + ED+G Y C A N R    +   + 
Sbjct: 342 NPVPDISWRRLDGSPLPGKARFSKSQALLEIPNFQQEDEGVYECAAGNLRGRNLAKGQLV 401

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             A P +   + + H+     L W C A G P   Y+WF+NGE       PL  ++R  I
Sbjct: 402 FYAPPEWEQKIQNTHLSIYDSLFWECRASGKPSPWYTWFKNGE-------PLHPEERIQI 454

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           ++  L I  LN   D A+YQC A+N+     ++A+LRVL   P F + P++  +    GG
Sbjct: 455 ENGTLVITTLNVS-DSAVYQCAAENKHGVISTNAELRVLASAPDFSRNPIKRHSIVHVGG 513

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           +VTI C P A P+    W++    +    R  + E+G L I  V+R D+G Y+C ATN  
Sbjct: 514 DVTIECRPRAFPRATVSWRRGAEGLRQSRRLLLLEDGGLKIHNVTRSDAGPYTCLATNQF 573

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G      +LIV    +     P  + +    ++ L C    +    VA++W  NG  I  
Sbjct: 574 GTARDTSQLIVKER-TVITVPPSNMDVTVGESIILPCQVSRDPSTAVAFLWLFNGDLI-- 630

Query: 725 MDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
            DL    T    + G   G L I N     +G Y C V++ +  +S    V V GPPG P
Sbjct: 631 -DLRNGATHFERVGGESAGDLMIRNIQLRHSGRYLCTVQTPLESLSAAADVTVRGPPGPP 689

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
            GV V  V  TS+ I+W  G  N  PI  + +  RT ++  W       +G + +  +G+
Sbjct: 690 EGVSVEHVSSTSSHIRWRPGPDNNSPIQIFTVQTRTPFSVGW-----QAVGTDPEILSGQ 744

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+AGN +G GEPS PS    T A  P   P  I GGGG   +
Sbjct: 745 TYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTRASVPAVPPVNIEGGGGSRSE 804

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L ++WEP+  E Q+     Y + +R    T +   ++    +    V R  S    + +E
Sbjct: 805 LVVTWEPIAEELQSGDGFGYLVMFRPLGSTAWTKASVASVESSRF-VYRNESIAPLSPFE 863

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   ND G G  S V
Sbjct: 864 VKVGVYNDQGEGSLSPV 880



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 183/792 (23%), Positives = 282/792 (35%), Gaps = 94/792 (11%)

Query: 225 SYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGS 282
           SY W   D        +L+    D+R  +S   GNL I    Q  D G+Y C  +N+   
Sbjct: 242 SYAWAFND--------SLLSVHEDRRRFISQQTGNLYIAK-VQPSDVGNYTCFVTNREAR 292

Query: 283 II-----SESVQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYWAR 332
                  S  VQ A G +GE+  K   R P+     ++    + C    N P  +  W R
Sbjct: 293 RSVRGPPSPLVQRADGVMGEYEPKIEVRFPDTVPAAKDSSVKLECFALGN-PVPDISWRR 351

Query: 333 -DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 391
            D  P      K  F      L     +Q D G Y C   +     GRN     L  +  
Sbjct: 352 LDGSP---LPGKARFSKSQALLEIPNFQQEDEGVYECAAGNL---RGRNLAKGQLVFYAP 405

Query: 392 SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNR 451
             ++Q K  N     +       D +  EC A G P P Y W + G PL      +  N 
Sbjct: 406 PEWEQ-KIQNTHLSIY-------DSLFWECRASGKPSPWYTWFKNGEPLHPEERIQIENG 457

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKH--MDNQADLTW 508
            L I  + V D   Y C A N    + ++  + + A  P+F+     +H  +    D+T 
Sbjct: 458 TLVITTLNVSDSAVYQCAAENKHGVISTNAELRVLASAPDFSRNPIKRHSIVHVGGDVTI 517

Query: 509 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 568
            C     P  T SW R  E L      L  +D      NV          D   Y C A 
Sbjct: 518 ECRPRAFPRATVSWRRGAEGLRQSRRLLLLEDGGLKIHNVT-------RSDAGPYTCLAT 570

Query: 569 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 626
           NQ  T   ++QL ++  +      P   +   GE  ++ + C     P     F+W  +G
Sbjct: 571 NQFGTARDTSQL-IVKERTVITVPPSNMDVTVGE--SIILPCQVSRDPSTAVAFLWLFNG 627

Query: 627 NIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           ++I        FE       G+L+I  +    SG Y CT         +   + V   P 
Sbjct: 628 DLIDLRNGATHFERVGGESAGDLMIRNIQLRHSGRYLCTVQTPLESLSAAADVTVRGPPG 687

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 740
             E +  +   +   +++ R        + +  + T     +G   +     P I + G 
Sbjct: 688 PPEGVSVEHVSSTSSHIRWRPGPDNNSPIQIFTVQTRTPFSVGWQAVGT--DPEI-LSGQ 744

Query: 741 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ---- 785
               T    +   EYE   V  +++G          + T+ +V    P  + GG      
Sbjct: 745 TYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTRASVPAVPPVNIEGGGGSRSE 804

Query: 786 -VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
            VV     +  +Q  DG         Y ++ R   ++ W   S  V   E  R+  R E+
Sbjct: 805 LVVTWEPIAEELQSGDG-------FGYLVMFRPLGSTAWTKAS--VASVESSRFVYRNES 855

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
                + P S +E KV   N+ G G  S  S  Y+   D+P  AP           ++ +
Sbjct: 856 -----IAPLSPFEVKVGVYNDQGEGSLSPVSIVYSG-EDEPQLAPRGTSVQSFSASEVEV 909

Query: 905 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 964
           SW  +   +     + Y++ +  ++  E      +  GN  I    I      T Y   V
Sbjct: 910 SWNAIAWNRNTGRVLGYEVLYWTEDSREPMIGKARVSGN--ITTKNITGLKANTIYFASV 967

Query: 965 QAINDVGPGPES 976
           +A N  G GP S
Sbjct: 968 RAYNTGGTGPSS 979


>gi|121583914|ref|NP_001073520.1| contactin 4 precursor [Danio rerio]
 gi|115313841|gb|AAI24395.1| Zgc:153573 [Danio rerio]
          Length = 1028

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 257/792 (32%), Positives = 377/792 (47%), Gaps = 36/792 (4%)

Query: 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRF 251
           F KQP  +V  +       ++  SC A G P P Y W        +L  ++++P      
Sbjct: 27  FSKQPGSIVSPVDSMEKSREVVFSCEAQGDPPPFYRW--------KLNGSVVNPKPGSHH 78

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIGNQN 310
           +L+GGNL IN   +  D G+Y C ASN FG+I+S    L F ++  F   KR+     + 
Sbjct: 79  SLTGGNLRINHLNKDMDAGTYQCLASNSFGTIVSREASLTFAYLENFKTHKRSSVSVREG 138

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCN 369
            G  + C PP +   + + W  + +P+ V++D R FVS + G LY + +E  D GNY+C 
Sbjct: 139 QGVVLLCGPPPHSGALTFSWIFNEYPSIVKQDSRRFVSQETGNLYIAKVEPSDVGNYTCV 198

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYP 427
           V + V+ T   GP  PL +   ++    ++       FPE  +   G  VRLEC A G P
Sbjct: 199 VTNTVTKTQVQGPPTPLIL--RTDGVMGEYEPKIEVQFPEVVQVAKGSTVRLECFALGNP 256

Query: 428 VPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
           VPS +W R  G P  R       + ++ IP  + ED G Y C A N +        +S  
Sbjct: 257 VPSISWRRVDGVPFARKVDVRKTSGVMEIPYFQQEDAGTYECVAENSKGRNSVQGKLSFF 316

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
           A P       D        L W C+A G P  +Y W +NGE L     P E+  R  + +
Sbjct: 317 ASPQLIEKPQDVQKPIDDSLVWECKATGKPKPSYRWMKNGENLE----PTEE--RVQVIN 370

Query: 547 NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV 606
             L+I +L    D  MYQC A N+    YS+A+LRV+ + P F +  L+S T   EGG+V
Sbjct: 371 GALSITHL-ALSDIGMYQCVAGNKYGEVYSNAELRVIAVAPDFSQNQLKSHTLVKEGGDV 429

Query: 607 TIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
            I C P+ +P+    W+K  + +    R  + E+G+L IS VS+ D+G Y+C A N  G 
Sbjct: 430 LIECKPKMSPRGSISWRKGNDALRESSRIAVLESGSLRISNVSKSDAGSYTCVARNQFGE 489

Query: 667 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 724
             S G L+V   P+     P  + +    ++ L C    +  L++ + W  N   +  G+
Sbjct: 490 ASSLGNLLVKE-PTIITTAPNTLDVTVGESIILPCQVSYDPSLELKFTWFFNEQLIHFGS 548

Query: 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
                 E        G + I N     AG+Y C V++ V   S  T +IV GPPG P  +
Sbjct: 549 HG-GYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSSSIATDLIVRGPPGPPTSI 607

Query: 785 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRYTGRK 842
            V E+  T+AT+ W  G  N  PIT Y I ART ++  W  VS    V+G       G  
Sbjct: 608 HVEEITDTTATLSWRPGPDNHSPITAYTIQARTPFSLGWQAVSTVPEVVG-------GSH 660

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+V+A N +G GEPS PS +  T    P   P+ + GGGG   +L
Sbjct: 661 LTATVIELNPWVEYEFRVLASNAVGTGEPSKPSKKARTKDTVPKVTPANVSGGGGSRSEL 720

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+P E QN     Y + +R    T +    +         V +  +   ++ ++V
Sbjct: 721 VITWEPVPEELQNGAGFGYVVAFRPFGSTGWMQAAVPS-PEASKYVFKNETILPFSPFQV 779

Query: 963 KVQAINDVGPGP 974
           KV A N+ G GP
Sbjct: 780 KVGAYNNKGEGP 791



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 154/663 (23%), Positives = 250/663 (37%), Gaps = 80/663 (12%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
            G +     +Q DAG Y C  ++     GRN     L  F  ++ Q ++ P +  K    
Sbjct: 280 SGVMEIPYFQQEDAGTYECVAEN---SKGRNSVQGKLSFF--ASPQLIEKPQDVQKPI-- 332

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFENFNRILTIPNVKVEDQGEYIC 468
                D +  EC A G P PSY W + G  L P     +  N  L+I ++ + D G Y C
Sbjct: 333 ----DDSLVWECKATGKPKPSYRWMKNGENLEPTEERVQVINGALSITHLALSDIGMYQC 388

Query: 469 RASNDRSALESSVTISIQA-EPNFTIPLTDKH--MDNQADLTWTCEAFGVPDVTYSWFRN 525
            A N    + S+  + + A  P+F+      H  +    D+   C+    P  + SW + 
Sbjct: 389 VAGNKYGEVYSNAELRVIAVAPDFSQNQLKSHTLVKEGGDVLIECKPKMSPRGSISWRKG 448

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
            + L       E      ++   L I  ++ + D   Y C A+NQ     S   L  L  
Sbjct: 449 NDALR------ESSRIAVLESGSLRISNVS-KSDAGSYTCVARNQFGEASSLGNL--LVK 499

Query: 586 KPSF-KKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFEN-- 640
           +P+     P   +   GE  ++ + C     P  + KF W  +  +I  G     FE   
Sbjct: 500 EPTIITTAPNTLDVTVGE--SIILPCQVSYDPSLELKFTWFFNEQLIHFGSHGGYFEKVG 557

Query: 641 -----GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
                G+++I  +    +G Y+C              LIV   P     +  +       
Sbjct: 558 GQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSSSIATDLIVRGPPGPPTSIHVEEITDTTA 617

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
            L  R        +    I       +G   ++ +  P + + G  L  T        EY
Sbjct: 618 TLSWRPGPDNHSPITAYTIQARTPFSLGWQAVSTV--PEV-VGGSHLTATVIELNPWVEY 674

Query: 756 E--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW------ 798
           E   +  + VG         K  TK TV    P  + GG       ++   I W      
Sbjct: 675 EFRVLASNAVGTGEPSKPSKKARTKDTVPKVTPANVSGGGG----SRSELVITWEPVPEE 730

Query: 799 -TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
             +GA  G  +  ++    T W      +   V   E  +Y  + E      ++P+S ++
Sbjct: 731 LQNGAGFGY-VVAFRPFGSTGW------MQAAVPSPEASKYVFKNET-----ILPFSPFQ 778

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            KV A N  G G P  P     +  ++P +APSR+        D+ +SW+ LP       
Sbjct: 779 VKVGAYNNKGEG-PFGPVITIYSAEEEPGRAPSRLRAKSLSASDVEVSWKALPWSTSKKR 837

Query: 918 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPE 975
            + Y++ + +KN+ E  S  L+  GN  +A+++    S  YY    + V+A N  G GP 
Sbjct: 838 VLGYELRYWEKNEKEDASSVLRTVGNRTLAIIQGLKGSSTYY----ITVRAYNTAGTGPP 893

Query: 976 SEV 978
           S V
Sbjct: 894 SPV 896


>gi|119584280|gb|EAW63876.1| contactin 4, isoform CRA_d [Homo sapiens]
          Length = 699

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/703 (33%), Positives = 358/703 (50%), Gaps = 34/703 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 ARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGE-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T
Sbjct: 359 RDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTC 477

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 478 IATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GP
Sbjct: 537 GHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 596

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  PIT Y I ART ++  W  VS   + + +D 
Sbjct: 597 PGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID- 653

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             G+   +    L PW  YEF+ +A N +G GEPS PS +  T
Sbjct: 654 --GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694


>gi|326911406|ref|XP_003202050.1| PREDICTED: contactin-1-like [Meleagris gallopavo]
          Length = 1010

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 258/793 (32%), Positives = 396/793 (49%), Gaps = 42/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    ++++C A   P P+Y+W   ++  D         L+ 
Sbjct: 32  GPVFEEQPIDTIY--PEESSDGQVSMNCRARAVPFPTYKWKLNNWDID---------LTK 80

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GG LII++P +  D G Y C  SN FG++ S    L+FG++  F  +   E+  
Sbjct: 81  DRYSMVGGRLIISNPEKSRDAGKYVCIVSNIFGTVRSSEATLSFGYLDPFPPEEHYEVKV 140

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + C+PP +YP  ++Y W  + FP F+  D+R FVS  +G LY + +E  D GN
Sbjct: 141 REGVGAVLLCEPPYHYPDDLSYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGN 200

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P ++  ++ +P +    F +     G  V LEC A 
Sbjct: 201 YSCFVSSPSITKSVFSKFIPL--IPQADRAKV-YPADIKVKFKDTYALLGQNVTLECFAL 257

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W++   P+P  A       +L I N++ ED+G Y C A N +   +    + 
Sbjct: 258 GNPVPELRWSKYLEPMPATAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVY 317

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D   D  +DL W C A G P  T  W +NG                  
Sbjct: 318 VQASPEWVEHINDTEKDIGSDLYWPCVATGKPIPTIRWLKNG---------------VSF 362

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           +   L I+ L  E D  MYQC A+N     Y++A+L+++   P+F+  P++ +  A +GG
Sbjct: 363 RKGELRIQSLTFE-DAGMYQCIAENTHGIIYANAELKIVASPPTFELNPMKKKILAAKGG 421

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K   ++ +G R +I+++G+L I  V++ D G Y+C A N  
Sbjct: 422 RVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCFAENNR 481

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L +    +     P  + +    N  ++C A  +  LD+ +IW+ NG  I  
Sbjct: 482 GKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDF 540

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              +E    N+ I   G L I N     AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 541 EKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 600

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ E+  T+  + W+ G  N  PI+ Y I ++T  +  W +        E     G  E
Sbjct: 601 IRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDIEGNME 655

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           ++    L+PW  YEF++IA N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 656 SARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELT 715

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++   + E++  T+     +G  V +  S    T+Y+VK
Sbjct: 716 ITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPSTQYQVK 774

Query: 964 VQAINDVGPGPES 976
           V+A N+ G GP S
Sbjct: 775 VKAFNNKGDGPFS 787


>gi|440911548|gb|ELR61203.1| Contactin-5, partial [Bos grunniens mutus]
          Length = 1007

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 258/796 (32%), Positives = 382/796 (47%), Gaps = 34/796 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C A G P P+Y W +            ID  SD
Sbjct: 6   GPVFMQEPDDIIFPTD--SDEKKVALNCEARGNPIPNYRWLRN--------GTEIDLESD 55

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            R++L  G  II++P + +D G Y C A+N FGSI+S  V L F         +AP   +
Sbjct: 56  YRYSLIDGAFIISNPSEAKDSGHYQCLAANTFGSILSREVILQFACFPGGTSGKAPATSS 115

Query: 309 QNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +   A          G + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 116 GDVRDAGLVPGSGRSSGEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQASDVGSY 175

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 176 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 233

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  +       +L IPNV+++D G Y CRA N R        + 
Sbjct: 234 GNPVPTITWMKINGYIPSKSRLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 293

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       LPL  Q R  +
Sbjct: 294 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------LPLLLQSRIEM 346

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+  T Y+SA+L++L   P+F    L+      +  
Sbjct: 347 VNGVLMIHNVN-QSDAGMYQCLAENKYGTIYASAELKILASAPTFALNQLKKTIIIPKDQ 405

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 406 EVIIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYICRGENVF 465

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G  E    + V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 466 GSAEITATVSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPIDF 524

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             +    E+         L I N     AG Y C V++T   +S +  ++V GPPG PG 
Sbjct: 525 EKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGI 584

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRK 842
           V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V +  TG  
Sbjct: 585 VIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPEIITGDM 638

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+++   L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L
Sbjct: 639 ESAMAVELNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHEL 698

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+  E QN     Y + +R  N T    E +    +    + R  S    T +EV
Sbjct: 699 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEV 757

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S++
Sbjct: 758 KVGVYNNKGDGPFSQI 773


>gi|193788222|dbj|BAG53116.1| unnamed protein product [Homo sapiens]
          Length = 699

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/703 (33%), Positives = 358/703 (50%), Gaps = 34/703 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 ARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGE-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T
Sbjct: 359 RDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTC 477

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ N
Sbjct: 478 IATNHFGTASSTGNLVV-KDPTRVMVPPSGMDVTVGESIVLPCQVTHDHSLDIVFTWSFN 536

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G  I  + D +  E        G L I N     AG+Y C+V+++V ++S    +IV GP
Sbjct: 537 GHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGP 596

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  V + E+  T+A + W  G  N  PIT Y I ART ++  W  VS   + + +D 
Sbjct: 597 PGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID- 653

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             G+   +    L PW  YEF+ +A N +G GEPS PS +  T
Sbjct: 654 --GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694


>gi|326679017|ref|XP_001340839.4| PREDICTED: contactin-3-like [Danio rerio]
          Length = 991

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 256/781 (32%), Positives = 374/781 (47%), Gaps = 31/781 (3%)

Query: 202 DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN 261
           DL+  S+  + TL+C A G P P Y W         L   LI+  +D R  LSGGNL+I 
Sbjct: 5   DLTVGSLEEEATLACDAKGIPAPQYRW--------SLNGTLINLSTDSRRRLSGGNLVIR 56

Query: 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPT 321
              + +D G Y C A N  G+I+S    L F ++      R+     +  G  + C  P+
Sbjct: 57  SLDRAQDGGIYQCTAFNPHGAILSRRASLQFAYLNLKTQTRSAVSVREGQGVVLLCGTPS 116

Query: 322 NYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRN 380
               +++ W  + +P FV++D R FVS + G LY + +E  D GNY+C V ++++     
Sbjct: 117 YAGDLSFAWVFNEYPYFVQQDNRRFVSQETGNLYIAKVEPSDVGNYTCVVVNRITKGKVL 176

Query: 381 GPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS 438
               PL +       +   K   +F    P A   G  V LEC A G PVP   W R  +
Sbjct: 177 SSPTPLVLRTDGVMGEYEPKIEVHFSDMVPAA--KGSVVTLECFALGNPVPEITWRRANA 234

Query: 439 -PLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD 497
            P P     +N N +L IP+ + ED G Y C A N          +S  A+P +   + D
Sbjct: 235 VPFPSKVKMKNSNVVLEIPSFQQEDAGGYECVAENKMGKNTVQGRLSFHAKPQWVQTMRD 294

Query: 498 KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 557
             +  +  L W C+A G P  +YSW +NGELL +E       DR  I++  LTI  +N  
Sbjct: 295 IALSIEERLFWECKANGKPKPSYSWLKNGELLAAE-------DRIQIENGALTISSVNLS 347

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 617
            D  MYQC A+N+    Y  A+L VL   P F + PL +   A  G  VT+ C P+A P 
Sbjct: 348 -DAGMYQCVAENKHGIIYFGAELVVLASPPDFSRSPLRTLLKAKTGSTVTMECKPQAFPS 406

Query: 618 PKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677
              +W+K   ++    R     +G L ++ V++ D G Y+C A N  G   + GRL+V  
Sbjct: 407 AITLWRKGNEVMQRTDRITFLPDGTLRLTNVTKMDGGNYACLARNQFGTASTSGRLLVTD 466

Query: 678 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 737
            P+   Q P  + I    ++ L C    +  LDV++ W  NG  +  +D    E    + 
Sbjct: 467 -PTQITQGPMDMEIIVGESIVLPCQISCDPALDVSFSWAFNGQLLSKLD-QHYEHVGGST 524

Query: 738 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797
            G L+ I N     AG+Y CVV + V  +S    +IV+GPPG P GV V E+  ++A + 
Sbjct: 525 SGDLM-IRNIQLKHAGKYVCVVDTDVESLSAAAILIVKGPPGAPDGVTVEEITDSTAQLS 583

Query: 798 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
           W  G  NG PIT Y I A+T +   W  V  + + + +D   G    +    L  W  +E
Sbjct: 584 WRPGQDNGSPITSYIIQAKTAFTVGWQAV--NTVPEVID---GNTLTATVVDLNAWVEFE 638

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F+V+A N +G GEPS  S +  T    P  AP+ +GGGGG   +L I+WEP+P + QN  
Sbjct: 639 FRVLARNSVGVGEPSPASLKTRTEDAVPDTAPTDVGGGGGSKSELVITWEPVPEDLQNGD 698

Query: 918 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              Y I +R   +  + +  +         V R  S   ++ + VKV A N  G GP S 
Sbjct: 699 GFGYIIAFRPLGEVNW-THAVTSVPTQSRYVYRNESILPFSPFSVKVGAYNTKGQGPFSP 757

Query: 978 V 978
           V
Sbjct: 758 V 758



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 184/783 (23%), Positives = 300/783 (38%), Gaps = 119/783 (15%)

Query: 248 DKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF--GSIISESVQLAF---GFIGEFNLK 301
           ++RF +   GNL I    +  D G+Y C   N+   G ++S    L     G +GE+  K
Sbjct: 138 NRRFVSQETGNLYIAK-VEPSDVGNYTCVVVNRITKGKVLSSPTPLVLRTDGVMGEYEPK 196

Query: 302 RAPEIGN-----QNWGKAMFCDPPTNYPGVNYYWARDY---FPNFVEEDKRVFVSYDGAL 353
                 +     +     + C    N P     W R     FP+ V+      V     L
Sbjct: 197 IEVHFSDMVPAAKGSVVTLECFALGN-PVPEITWRRANAVPFPSKVKMKNSNVV-----L 250

Query: 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413
              + +Q DAG Y C  ++K+      G     ++  H+  Q ++   +   +  E    
Sbjct: 251 EIPSFQQEDAGGYECVAENKMGKNTVQG-----RLSFHAKPQWVQTMRDIALSIEE---- 301

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
             ++  EC A G P PSY+W + G  L      +  N  LTI +V + D G Y C A N 
Sbjct: 302 --RLFWECKANGKPKPSYSWLKNGELLAAEDRIQIENGALTISSVNLSDAGMYQCVAENK 359

Query: 474 RSALESSVTISIQAEP-NFT-IPL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
              +     + + A P +F+  PL T       + +T  C+    P     W +  E++ 
Sbjct: 360 HGIIYFGAELVVLASPPDFSRSPLRTLLKAKTGSTVTMECKPQAFPSAITLWRKGNEVM- 418

Query: 531 SETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
                 +  DR  F+ D  L +  +  + D   Y C A+NQ  T  +S +L V T     
Sbjct: 419 ------QRTDRITFLPDGTLRLTNVT-KMDGGNYACLARNQFGTASTSGRLLV-TDPTQI 470

Query: 590 KKRPLESETYAGEGGNV--TIFCNPEAAPKPKFVWKKDGNIIGS--------GGRRKIFE 639
            + P++ E   GE   +   I C+P  A    F W  +G ++          GG      
Sbjct: 471 TQGPMDMEIIVGESIVLPCQISCDP--ALDVSFSWAFNGQLLSKLDQHYEHVGGS----T 524

Query: 640 NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLIVLHGPSYYEQLPPKITIA----AH 694
           +G+L+I  +    +G Y C   T+V  +  S   ++++ GP      P  +T+     + 
Sbjct: 525 SGDLMIRNIQLKHAGKYVCVVDTDVESL--SAAAILIVKGP---PGAPDGVTVEEITDST 579

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  R        +    I       +G   +N +  P + IDG  L  T        E
Sbjct: 580 AQLSWRPGQDNGSPITSYIIQAKTAFTVGWQAVNTV--PEV-IDGNTLTATVVDLNAWVE 636

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           +E   + +++VG         K  T+  V    P  + GG       K+   I W    +
Sbjct: 637 FEFRVLARNSVGVGEPSPASLKTRTEDAVPDTAPTDVGGGGG----SKSELVITWEPVPE 692

Query: 801 GATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
              NG     I  ++ +   NW     +V          RY  R E+     ++P+S + 
Sbjct: 693 DLQNGDGFGYIIAFRPLGEVNWTHAVTSVPTQ------SRYVYRNES-----ILPFSPFS 741

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            KV A N  G G P SP     +  ++P   P  +        ++ +SW  L    +   
Sbjct: 742 VKVGAYNTKGQG-PFSPVTIVFSAENEPSGVPDGVWARSISATEIEVSWHILSVSTERVL 800

Query: 918 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAV----VRIPSEFYYTEYEVKVQAINDVGPG 973
             Y  ++W  ++DT  + ET+   G V ++     V I     YT+Y + V A N  G G
Sbjct: 801 G-YEVVYW--EDDT--KPETM---GKVRVSANQDKVNISGLRGYTQYFLTVSAFNTAGTG 852

Query: 974 PES 976
           P S
Sbjct: 853 PLS 855


>gi|194378322|dbj|BAG57911.1| unnamed protein product [Homo sapiens]
          Length = 956

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 246/737 (33%), Positives = 364/737 (49%), Gaps = 28/737 (3%)

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-N 308
            + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K    +   
Sbjct: 4   HYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVR 63

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
           +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GNY+
Sbjct: 64  EGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYT 123

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFG 425
           C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A G
Sbjct: 124 CFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALG 181

Query: 426 YPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R    +   + 
Sbjct: 182 NPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI 241

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             A P +   + + H+    +L W C+A G P+  Y+W +NGE LN E       +R  I
Sbjct: 242 FYAPPEWEQKIQNTHLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQI 294

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           ++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ +++   GG
Sbjct: 295 ENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 353

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           ++ I C P A P+    WK+    +    R  + E+G+L I  ++R D+G Y+C ATN  
Sbjct: 354 DIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQF 413

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W  NG  I  
Sbjct: 414 GTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI-- 470

Query: 725 MDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
            DL +       I G   G L I N     +G+Y C V++T+  +S    +IV GPPG P
Sbjct: 471 -DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPP 529

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +    +   G+
Sbjct: 530 EDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGK 584

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG   +
Sbjct: 585 TYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSE 644

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+WE +P E QN     Y I +R    T +  E +    +    V R  S    + +E
Sbjct: 645 LVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFE 703

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   ND G G  S V
Sbjct: 704 VKVGVYNDEGEGSLSTV 720



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 292/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 82  SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 130

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 131 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 189

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 190 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 241

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N     +       D +  EC A G P P Y W + G  L      +
Sbjct: 242 FYAPPEWEQ-KIQNTHLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 293

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 294 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 353

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 354 DIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSYT 406

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 407 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 463

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 464 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 523

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 524 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 580

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 581 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGG 640

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 641 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 693

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N+ G G  S+ +  Y+   D+P  AP           ++
Sbjct: 694 ES-----IIPLSPFEVKVGVYNDEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 747

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 748 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 805

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 806 SVRAYNTAGTGPSS 819



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 112/299 (37%), Gaps = 46/299 (15%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI +++   C A G PNP Y W K     +RL     +P  ++R  +  G LII     V
Sbjct: 258 SIYDNLLWECKASGKPNPWYTWLKNG---ERL-----NP--EERIQIENGTLIITM-LNV 306

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNY 323
            D G Y C A NK+  I + +         +F+   +K+   +  Q  G  +    P  +
Sbjct: 307 SDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFV--QVGGDIVIGCKPNAF 364

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P     W R      + + KR+F+  DG+L    + + DAG+Y+C   ++       G  
Sbjct: 365 PRAAISWKRGT--ETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSL 422

Query: 384 F----PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRRG 437
                 +   P S                     G+ + L C     P     + W   G
Sbjct: 423 IVKERTVITVPPSKMDV---------------TVGESIVLPCQVSHDPSIEVVFVWFFNG 467

Query: 438 SPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
             +       +F RI       L I N+++   G+Y+C       +L +   I ++  P
Sbjct: 468 DVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPP 526



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 134/329 (40%), Gaps = 36/329 (10%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P P   W + D            PL  K    S    I+  P  Q ED
Sbjct: 171 SSVKLECFALGNPVPDISWRRLDG----------SPLPGK-VKYSKSQAILEIPNFQQED 219

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQN---WGKAMFCDPPTNYPG 325
            G Y C ASN  G  +++  QL F    E+  K    I N +   +   ++    +  P 
Sbjct: 220 EGFYECIASNLRGRNLAKG-QLIFYAPPEWEQK----IQNTHLSIYDNLLWECKASGKPN 274

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             Y W ++     +  ++R+ +  +G L  + L   D+G Y C  ++K      N     
Sbjct: 275 PWYTWLKN--GERLNPEERIQIE-NGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRV 331

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA- 444
           L   P  +   +K      K+F +    G  + + C    +P  + +W +RG+   R + 
Sbjct: 332 LASAPDFSKSPVK-----KKSFVQ---VGGDIVIGCKPNAFPRAAISW-KRGTETLRQSK 382

Query: 445 -YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
             F   +  L I N+   D G Y C A+N     +++ ++ ++     T+P +   +   
Sbjct: 383 RIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVG 442

Query: 504 ADLTWTCEAFGVP--DVTYSWFRNGELLN 530
             +   C+    P  +V + WF NG++++
Sbjct: 443 ESIVLPCQVSHDPSIEVVFVWFFNGDVID 471


>gi|348514832|ref|XP_003444944.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
          Length = 1003

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 258/796 (32%), Positives = 393/796 (49%), Gaps = 36/796 (4%)

Query: 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRF 251
           F KQP  VVF +       ++  SC A G+P P Y W        +L  + I P    R+
Sbjct: 2   FTKQPGSVVFPIRSGESRREVVFSCEAQGHPPPFYRW--------KLNDSFITPRPGSRY 53

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIGNQN 310
           +L GGNL I    + ED G Y C ASN FG+I+S    L   ++  F   +R+P    + 
Sbjct: 54  SLMGGNLHIAHLNKEEDVGIYQCMASNSFGTIVSREASLHVAYLENFKTQRRSPVRVREG 113

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCN 369
            G  + C PP +   +++ W  +  P++V +D R FVS   G LY + +E  D GNY+C 
Sbjct: 114 QGVVLLCGPPPHSGELSFTWIFNEHPSYVIQDTRRFVSQKTGNLYIAKVEPSDVGNYTCV 173

Query: 370 VQSKVSDTGRNGPFFPL--KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP 427
           V + V+ +   GP  PL  +V       + K    FP+  P A  +   V+LEC A G P
Sbjct: 174 VTNTVTKSSVEGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPVAKSS--TVKLECFALGNP 231

Query: 428 VPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
           VP+ +W +  G+   R       + +L IP  + ED G Y C A N R        +S  
Sbjct: 232 VPTISWKKVDGASFTRKVDINKASGVLEIPYFQQEDAGMYECVAENSRGKNSVKGKLSYY 291

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
           A P+FT    D        L W C+A G P  +Y W +NGE L+    P+ED  R  + +
Sbjct: 292 AAPHFTEKPQDVQKTIDETLVWECKASGKPKPSYRWLKNGEPLD----PMED--RVQVNN 345

Query: 547 NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV 606
            VLTI  LN   D  M+QC A+N+    +++A+LRV+ + P F +  L+++T A +GG+V
Sbjct: 346 GVLTISSLN-LADIGMFQCVAENKHGRIFTNAELRVVAIAPDFSQNLLKAQTLARQGGDV 404

Query: 607 TIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
            I C P+ +P+    W+K    +    R  + +NG+L IS VS+ D+G+Y+C A N  G+
Sbjct: 405 LIECKPKMSPRGMISWRKGKEALRESHRVMVLDNGSLRISNVSKTDAGMYTCVARNQFGV 464

Query: 667 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 724
             S G L+V    +        + +    ++ L C    +  LD+ + W  N   +  G+
Sbjct: 465 ASSAGSLLVKEA-TVITSPAGHLDVTVGESIVLPCQVSHDPTLDLKFTWFFNEQLIHFGS 523

Query: 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
                 +      DG ++ I N     AG+Y C V++ V  +S  T V+V GPPG P   
Sbjct: 524 HGAYFEKVGGQRSDGDIM-IRNIQLRHAGKYTCAVQTKVDSVSIATDVVVRGPPGPPVDC 582

Query: 785 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRYTGRK 842
           QV ++ +T+A++ W  G+ N  PI  Y I ART ++  W  V+    ++G       G++
Sbjct: 583 QVTKMTETTASLSWGPGSDNHSPILSYTIQARTPFSLGWQAVTTVPELLG-------GKQ 635

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
            ++    L  W  YEF+V+A N +G GEPS PS +  T    P   P+R+ GGGG   +L
Sbjct: 636 LSATVTDLSSWVDYEFRVLATNSIGTGEPSKPSKKARTKDTLPRVTPARVSGGGGGRSEL 695

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+P E Q+ P   Y + +R      +    +    +    V +  S   ++ Y+V
Sbjct: 696 VITWEPVPEEMQSGPGFGYVVAFRPLGAQGWMQAAVTS-PDASRYVFKNESIPPFSPYQV 754

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S V
Sbjct: 755 KVGVYNNKGEGPFSPV 770



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 155/668 (23%), Positives = 253/668 (37%), Gaps = 90/668 (13%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
            G L     +Q DAG Y C  ++     G+N     L  +   +F +   P +  KT  E
Sbjct: 255 SGVLEIPYFQQEDAGMYECVAEN---SRGKNSVKGKLSYYAAPHFTEK--PQDVQKTIDE 309

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFENFNRILTIPNVKVEDQGEYIC 468
                  +  EC A G P PSY W + G PL P     +  N +LTI ++ + D G + C
Sbjct: 310 T------LVWECKASGKPKPSYRWLKNGEPLDPMEDRVQVNNGVLTISSLNLADIGMFQC 363

Query: 469 RASNDRSALESSVTISIQA-EPNFTIPLTDKHM--DNQADLTWTCEAFGVPDVTYSWFRN 525
            A N    + ++  + + A  P+F+  L           D+   C+    P    SW + 
Sbjct: 364 VAENKHGRIFTNAELRVVAIAPDFSQNLLKAQTLARQGGDVLIECKPKMSPRGMISWRKG 423

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLT 584
            E L        +  R  + DN  ++R  N  + D  MY C A+NQ     S+  L V  
Sbjct: 424 KEAL-------RESHRVMVLDNG-SLRISNVSKTDAGMYTCVARNQFGVASSAGSLLV-- 473

Query: 585 LKPSFKKRPLESETYAGE-----GGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKI 637
                 K      + AG      G ++ + C     P    KF W  +  +I  G     
Sbjct: 474 ------KEATVITSPAGHLDVTVGESIVLPCQVSHDPTLDLKFTWFFNEQLIHFGSHGAY 527

Query: 638 FE-------NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLIVLHGPSYYEQLPP-- 687
           FE       +G+++I  +    +G Y+C   T V  +  S    +V+ GP      PP  
Sbjct: 528 FEKVGGQRSDGDIMIRNIQLRHAGKYTCAVQTKVDSV--SIATDVVVRGPPG----PPVD 581

Query: 688 -KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
            ++T        L     ++    +   +T       ++    + T    + G  L  T 
Sbjct: 582 CQVTKMTETTASLSWGPGSDNHSPILS-YTIQARTPFSLGWQAVTTVPELLGGKQLSATV 640

Query: 747 ASFADAGEYECVVKST--VG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 795
              +   +YE  V +T  +G         K  TK T+    P   P  V      ++   
Sbjct: 641 TDLSSWVDYEFRVLATNSIGTGEPSKPSKKARTKDTL----PRVTPARVSGGGGGRSELV 696

Query: 796 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
           I W          P   Y +  R      W   +  V   +  RY  + E+     + P+
Sbjct: 697 ITWEPVPEEMQSGPGFGYVVAFRPLGAQGWMQAA--VTSPDASRYVFKNES-----IPPF 749

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
           S Y+ KV   N  G G P SP     +  ++P +AP R+        ++ ++W+PLP   
Sbjct: 750 SPYQVKVGVYNNKGEG-PFSPVTTIYSAEEEPSRAPGRLRARSVSASEVEVTWKPLPWSN 808

Query: 914 QNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDV 970
                + Y++ +W +K   E  +  ++  GN    ++R    S  YY    V ++A N  
Sbjct: 809 NRRRILGYELQYWSEKQKQE-AATVIRTAGNKTSVLIRDLEGSSTYY----VCLRAYNSA 863

Query: 971 GPGPESEV 978
           G GP+S +
Sbjct: 864 GVGPQSNI 871


>gi|344287936|ref|XP_003415707.1| PREDICTED: contactin-5 [Loxodonta africana]
          Length = 1109

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 255/813 (31%), Positives = 386/813 (47%), Gaps = 41/813 (5%)

Query: 174 YQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           Y      +  + +  GP F+++P DV+F     S    +   C     P PSY WF+   
Sbjct: 95  YHSSEAFKQDESVDYGPVFVQEPDDVIFPTD--SDEKKVAFDCEVRSNPVPSYRWFRN-- 150

Query: 234 VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                    ID  SD R++L  G  II++P + +D G Y C A+N FGSI+S    L F 
Sbjct: 151 ------GTEIDLESDYRYSLIDGTFIISNPIEAKDSGHYQCLAANTFGSILSREAILQFA 204

Query: 294 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP---GVNYYWARDYFPNFVEEDKRVFVSYD 350
           ++  F  +         +  +    PP+++     + Y W  + FP+FV ED R F+S +
Sbjct: 205 WLDNFEYQFY-----FMYFLSELLVPPSSHSRNIQIIYSWVFNEFPSFVAEDSRRFISQE 259

Query: 351 -GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTF 407
            G LY S ++  D G+Y C V++ V++     P  PL +       +   K   +FP T 
Sbjct: 260 TGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTV 319

Query: 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYI 467
             A   G  V++EC A G PVP+  W +    +P  A       +L IPNV+++D G Y 
Sbjct: 320 TAA--KGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQAMLEIPNVQLDDAGTYE 377

Query: 468 CRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
           CRA N R        + +   P++   L D H+D+ + L W C+A G P  TY W +NG 
Sbjct: 378 CRAENSRGKNSFRGQLQVYTYPHWIEKLNDTHLDSGSPLRWECKATGKPRPTYRWLKNG- 436

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
                 +PL  Q R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P
Sbjct: 437 ------VPLLPQSRVEMVNGVLMIHKVN-QSDAGMYQCLAENKYGAIYASAELKILASAP 489

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP 647
           +F    L+      +G  V + C P+ +PKP   WKK    +    R  I  +G+L I  
Sbjct: 490 TFALNQLKKTIIVTKGQEVIVECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRIQN 549

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
            S+ D G Y C   NV G  E    + V   P+  E  P +  +    ++ L C A  + 
Sbjct: 550 ASKSDEGKYVCQGENVFGSAEIIASVSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDA 608

Query: 708 LLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
            L+V + WT  G  I    +    E+  +      L I N     AG Y C V++T   +
Sbjct: 609 SLEVTFYWTLKGQPIDFEKEGGHFESIRVQASSADLMIRNILLMHAGRYGCRVQTTADSV 668

Query: 767 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
           S +  ++V GPPG PG V V E+ +++AT+ W   A N  P++ Y + AR+ ++  W  V
Sbjct: 669 SDEAELLVRGPPGPPGIVIVEEITESTATLSWGPAADNHSPVSSYNLQARSPFSLGWQTV 728

Query: 827 SEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                 K V +  TG  E+++   L PW  YEF+V+A N +G G+PS+PS    T    P
Sbjct: 729 ------KTVPEVITGDMESAMAVELNPWVEYEFRVVATNPIGTGDPSTPSRIIRTNEAVP 782

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
             AP+ + G  G+  +L I+WEP+  E QN     Y + +R  N T    E +       
Sbjct: 783 KTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEAS 841

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             + R  S    T +EVKV   N+ G GP S++
Sbjct: 842 KFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 874


>gi|63329|emb|CAA68753.1| precontactin (AA -20 to 1071) [Gallus gallus]
          Length = 1091

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 256/793 (32%), Positives = 393/793 (49%), Gaps = 42/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    ++++C A   P P+Y+W   ++  D         L+ 
Sbjct: 32  GPVFEEQPIDTIY--PEESSDGQVSMNCRARAVPFPTYKWKLNNWDID---------LTK 80

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GG L+I++P +  D G Y C  SN FG++ S    L+FG++  F  +   E+  
Sbjct: 81  DRYSMVGGRLVISNPEKSRDAGKYVCVVSNIFGTVRSSEATLSFGYLDPFPPEEHYEVKV 140

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + C+PP +YP  ++Y W  + FP F+  D+R FVS  +G LY + +E  D GN
Sbjct: 141 REGVGAVLLCEPPYHYPDDLSYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGN 200

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P ++  ++ +P +    F +     G  V LEC A 
Sbjct: 201 YSCFVSSPSITKSVFSKFIPL--IPQADRAKV-YPADIKVKFKDTYALLGQNVTLECFAL 257

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W++   P+P  A       +L I N++ ED+G Y C A N +   +    + 
Sbjct: 258 GNPVPELRWSKYLEPMPATAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVY 317

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D   D  +DL W C A G P  T  W +NG       L ++       
Sbjct: 318 VQASPEWVEHINDTEKDIGSDLYWPCVATGKPIPTIRWLKNGVSFRKGELRIQG------ 371

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               LT        D  MYQC A+N     Y++A+L+++   P+F+  P++ +  A +GG
Sbjct: 372 ----LTFE------DAGMYQCIAENAHGIIYANAELKIVASPPTFELNPMKKKILAAKGG 421

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K   ++ +G R  I+++G+L I  V++ D G Y+C A N  
Sbjct: 422 RVIIECKPKAAPKPKFSWSKGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTCFAENNR 481

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L +    +     P  + +    N  ++C A  +  LD+ +IW+ NG  I  
Sbjct: 482 GKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDF 540

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              +E    N+ I   G L I N     AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 541 EKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 600

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ E+  T+  + W+ G  N  PI+ Y I ++T  +  W +        E     G  E
Sbjct: 601 IRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDIEGNME 655

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           ++    L+PW  YEF++IA N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 656 SARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELT 715

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++   + E++  T+     +G  V +  S    T+Y+VK
Sbjct: 716 ITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPSTQYQVK 774

Query: 964 VQAINDVGPGPES 976
           V+A N  G GP S
Sbjct: 775 VKAFNSKGDGPFS 787


>gi|292494926|ref|NP_001004381.3| contactin-1 preproprotein [Gallus gallus]
 gi|116917|sp|P14781.1|CNTN1_CHICK RecName: Full=Contactin-1; AltName: Full=Neural cell recognition
           molecule F11; Flags: Precursor
 gi|63385|emb|CAA33018.1| neural cell recognition protein [Gallus gallus]
          Length = 1010

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 256/793 (32%), Positives = 393/793 (49%), Gaps = 42/793 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    ++++C A   P P+Y+W   ++  D         L+ 
Sbjct: 32  GPVFEEQPIDTIY--PEESSDGQVSMNCRARAVPFPTYKWKLNNWDID---------LTK 80

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GG L+I++P +  D G Y C  SN FG++ S    L+FG++  F  +   E+  
Sbjct: 81  DRYSMVGGRLVISNPEKSRDAGKYVCVVSNIFGTVRSSEATLSFGYLDPFPPEEHYEVKV 140

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + C+PP +YP  ++Y W  + FP F+  D+R FVS  +G LY + +E  D GN
Sbjct: 141 REGVGAVLLCEPPYHYPDDLSYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGN 200

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P ++  ++ +P +    F +     G  V LEC A 
Sbjct: 201 YSCFVSSPSITKSVFSKFIPL--IPQADRAKV-YPADIKVKFKDTYALLGQNVTLECFAL 257

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W++   P+P  A       +L I N++ ED+G Y C A N +   +    + 
Sbjct: 258 GNPVPELRWSKYLEPMPATAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVY 317

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D   D  +DL W C A G P  T  W +NG       L ++       
Sbjct: 318 VQASPEWVEHINDTEKDIGSDLYWPCVATGKPIPTIRWLKNGVSFRKGELRIQG------ 371

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               LT        D  MYQC A+N     Y++A+L+++   P+F+  P++ +  A +GG
Sbjct: 372 ----LTFE------DAGMYQCIAENAHGIIYANAELKIVASPPTFELNPMKKKILAAKGG 421

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K   ++ +G R  I+++G+L I  V++ D G Y+C A N  
Sbjct: 422 RVIIECKPKAAPKPKFSWSKGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTCFAENNR 481

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G   S G L +    +     P  + +    N  ++C A  +  LD+ +IW+ NG  I  
Sbjct: 482 GKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDF 540

Query: 725 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
              +E    N+ I   G L I N     AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 541 EKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 600

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           +++ E+  T+  + W+ G  N  PI+ Y I ++T  +  W +        E     G  E
Sbjct: 601 IRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDIEGNME 655

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
           ++    L+PW  YEF++IA N LG GEPS PS +  T    P  APS +GGGGG   +L+
Sbjct: 656 SARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELT 715

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W PL RE     N  Y + ++   + E++  T+     +G  V +  S    T+Y+VK
Sbjct: 716 ITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPSTQYQVK 774

Query: 964 VQAINDVGPGPES 976
           V+A N  G GP S
Sbjct: 775 VKAFNSKGDGPFS 787


>gi|126336359|ref|XP_001373886.1| PREDICTED: contactin-6 [Monodelphis domestica]
          Length = 1033

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 259/796 (32%), Positives = 378/796 (47%), Gaps = 38/796 (4%)

Query: 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           I RGP F ++P D+++ L      ++I L+C A GYP P Y W +            ID 
Sbjct: 27  ILRGPNFTQEPQDLIYSLGVED--SEIILNCAANGYPVPDYRWKQN--------GTDIDF 76

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
                  L GG+LII++P   E  G Y C A+N  G+I+S   +L F +I  F  K    
Sbjct: 77  TMSYHHRLVGGSLIISNPHIAEAIGIYQCLATNPLGTIVSRKAKLQFAYIENFETKTRST 136

Query: 306 IGN-QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDA 363
           +      G  +FC PP     V Y W  +  P  V+E  R F+S   G LY + +E  D 
Sbjct: 137 VSVLAGQGVVLFCGPPPYSGDVFYAWTYNDNPFPVQEASRRFISQATGNLYIAKVEPSDV 196

Query: 364 GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLEC 421
           GNY+C V +  +     GP  PL +   S+    ++       FPE   A  G  ++LEC
Sbjct: 197 GNYTCIVTNMEAQKRVQGPPTPLVL--RSDGVMGEYEPKIEVRFPEIMHAAKGSTIKLEC 254

Query: 422 VAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G PVP  +W +  GSPL R   +     ++ IPN + ED+G Y C A N R    + 
Sbjct: 255 FALGNPVPDISWRKLDGSPLARKIQYSKSKGMIAIPNFQEEDEGSYECIAGNLRGRNIAR 314

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             +   A P +   + +  +     L W C A G P  +Y+W +NGE       P+  +D
Sbjct: 315 GQLFFYALPEWDKKIQNTDLSLYDSLLWECRASGSPIPSYTWLKNGE-------PIVPED 367

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           R  I++  L I  LN   D   YQC A+N+ +T Y++A+LRV    P F K PL+  +  
Sbjct: 368 RIHIENGSLMITVLNLS-DSGFYQCVAENKYQTIYTNAELRVRASAPDFSKNPLQKISIV 426

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
             GGNVTI C P A+P+    WKK   II    R  I ++G+L I  VS+ D+G Y+C A
Sbjct: 427 QVGGNVTIECKPMASPRAMVSWKKGTEIIRQSKRFFILDDGSLNIYNVSKLDAGTYTCIA 486

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
            N  G+ ++ G L V+   +     PP++ +    ++ L C    +  ++V + W+ NG 
Sbjct: 487 KNQFGIAKASGNL-VIKERTIITVPPPQMDVTVGESIVLPCQVFHDPSVEVVFTWSFNGQ 545

Query: 721 RIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
            I   D          I G   G L I       +G+Y C+V++ +  +S    +IV GP
Sbjct: 546 VI---DFQRGVAHFERIGGESVGDLMIREIQLNHSGKYVCMVQTILDSLSAVADIIVRGP 602

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG P  +++  +  T++ + W  G  N  PI  Y I  RT ++  W  VS        + 
Sbjct: 603 PGPPNNLRIENISSTTSQLCWGPGVDNNSPIQIYTIQTRTPFSVGWLAVSTI-----PEI 657

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            +G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP+ I GGGG
Sbjct: 658 LSGKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSKLLRTKAAVPIVAPTNISGGGG 717

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WE +P E QN     Y I +R      +   ++         V R  S    
Sbjct: 718 SRSELVITWESIPEELQNGEGFGYIIMFRPVGSLMWTKASVASV-ETSKYVYRNESLTPL 776

Query: 958 TEYEVKVQAINDVGPG 973
           + +EVKV   N+ G G
Sbjct: 777 SPFEVKVGVYNNEGEG 792



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 137/589 (23%), Positives = 227/589 (38%), Gaps = 57/589 (9%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPL-PRN-AYFENFNRILTIPNVKVEDQGEYICRASN 472
           D +  EC A G P+PSY W + G P+ P +  + EN + ++T+ N+   D G Y C A N
Sbjct: 338 DSLLWECRASGSPIPSYTWLKNGEPIVPEDRIHIENGSLMITVLNLS--DSGFYQCVAEN 395

Query: 473 DRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELL 529
               + ++  + ++A  P+F+     K    Q   ++T  C+    P    SW +  E++
Sbjct: 396 KYQTIYTNAELRVRASAPDFSKNPLQKISIVQVGGNVTIECKPMASPRAMVSWKKGTEII 455

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
                      R+FI D+     Y   + D   Y C AKNQ     +S  L V+  +   
Sbjct: 456 -------RQSKRFFILDDGSLNIYNVSKLDAGTYTCIAKNQFGIAKASGNL-VIKERTII 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------G 641
              P + +   GE  ++ + C     P  +  F W  +G +I        FE       G
Sbjct: 508 TVPPPQMDVTVGE--SIVLPCQVFHDPSVEVVFTWSFNGQVIDFQRGVAHFERIGGESVG 565

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L+I  +  + SG Y C    +     +   +IV   P     L  +   +    L    
Sbjct: 566 DLMIREIQLNHSGKYVCMVQTILDSLSAVADIIVRGPPGPPNNLRIENISSTTSQLCWGP 625

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVV 759
                  + +  I T     +G + ++ +  P I + G +   T        EYE   V 
Sbjct: 626 GVDNNSPIQIYTIQTRTPFSVGWLAVSTI--PEI-LSGKMHTATVVGLNPWVEYEFRVVA 682

Query: 760 KSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP 807
            +++G          + TK  V +  P  + GG       ++   I W    +   NG  
Sbjct: 683 GNSIGIGEPSKPSKLLRTKAAVPIVAPTNISGGGG----SRSELVITWESIPEELQNGEG 738

Query: 808 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
              Y I+ R   +  W   S  V   E  +Y  R E+     L P S +E KV   N  G
Sbjct: 739 F-GYIIMFRPVGSLMWTKAS--VASVETSKYVYRNES-----LTPLSPFEVKVGVYNNEG 790

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            G   SP+    T  D+P  AP+          ++ I+W  +   +     + Y++ +  
Sbjct: 791 EGT-LSPATVVYTGEDEPQLAPTGASVQSYSSSEVDITWNAIAWNRSTGRVLGYEVLYWT 849

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           ++  E  +  ++  GNV   +  I      T Y   V+A N  G GP S
Sbjct: 850 EDSKETSAGKIRVRGNVTTKI--ITGLKANTIYFATVRAYNTAGSGPSS 896


>gi|410920631|ref|XP_003973787.1| PREDICTED: contactin-4-like [Takifugu rubripes]
          Length = 1035

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 256/797 (32%), Positives = 372/797 (46%), Gaps = 38/797 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           + P F KQP  +V+ +       ++  SC A G P PSY W        +L    I    
Sbjct: 30  QSPVFTKQPGSIVYPVETLERNKEVVFSCEAQGSPPPSYRW--------KLNGTEISSKY 81

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
              + LSGGNL I+   + +D G+Y C ASN FG+I+S    L F ++  F  +R   + 
Sbjct: 82  GSHYILSGGNLRISRLNKDQDAGTYQCLASNSFGTIVSREASLTFAYLENFKTQRRSSVS 141

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   + + W  + +P FV++D R F+S + G LY + +E  D GN
Sbjct: 142 VREGQGVVLLCGPPPHSGDLVFSWIFNEYPTFVKQDTRRFISQETGNLYIAKVEPSDVGN 201

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE--APKAGDKVRLECVA 423
           Y+C V + V+ T   GP  PL +   S+    ++       FPE      G  V+LEC A
Sbjct: 202 YTCVVTNTVTKTRVQGPPTPLVL--RSDGVMGEYEPKIEVQFPEFVHVAKGSTVKLECFA 259

Query: 424 FGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVPS NW R  G    R       + +L IP  + ED G Y C A N R        
Sbjct: 260 LGNPVPSINWRRVDGVSFSRKVDTRKASGVLEIPYFQQEDAGTYECVAENSRGMNTVKGK 319

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           +S  A P       D        L W C+A G P  +Y W +NGE L         ++R 
Sbjct: 320 LSFYAPPQLIEKPRDVQKLIDDSLVWECKATGKPKPSYRWMKNGENLE------PSEERI 373

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            + +  L+I  L    D  MYQC A N+    YS+A+LRV+ + P F +  L+S+T    
Sbjct: 374 QVANGALSISRLT-LSDTGMYQCVAGNKHGEAYSNAELRVIAVAPDFSQNQLKSQTLVKA 432

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           GG+  I C P+ +P     W+K  + +    R  I  NG+L I   ++ D+G+Y+C A N
Sbjct: 433 GGDALIECKPKMSPWGVVSWRKGSDPLRESNRISILANGSLRIWNATKSDAGLYTCIARN 492

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--V 720
             G+  S G L V   P+     P  + +    ++ L C    +  L++ + W  N   +
Sbjct: 493 QFGVASSTGTLSVKE-PTIITTPPSTLDVTVGESMVLPCQVSHDPSLELKFTWFFNEQLI 551

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
             G+      E        G + I N     AG+Y C V++ V  IS    +IV GPPG 
Sbjct: 552 HFGSHG-GFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIALDLIVRGPPGP 610

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS---EHVIGKEVDR 837
           P  V V E+  T+A++ W  G  N  PIT Y I ART ++  W  V+   E V G ++  
Sbjct: 611 PTSVHVEEIIDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVAGHQL-- 668

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                 A++   L PW  YEF+V+A N +G GEPS PS Q  T    P   P+ + GGGG
Sbjct: 669 -----RATVTE-LSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTYPKVTPANVSGGGG 722

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L I+WEP+P E QN P   Y + +R    T +    +         V +  S   +
Sbjct: 723 SRSELVITWEPVPEEFQNGPGFGYVVAFRPHGATGWMQAAVPT-AEASRYVFKNESIQPF 781

Query: 958 TEYEVKVQAINDVGPGP 974
           + + VKV   N+ G GP
Sbjct: 782 SPFHVKVGVYNNEGEGP 798



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 145/650 (22%), Positives = 243/650 (37%), Gaps = 58/650 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
            G L     +Q DAG Y C     V++  R       K+  ++  Q ++ P +  K    
Sbjct: 287 SGVLEIPYFQQEDAGTYEC-----VAENSRGMNTVKGKLSFYAPPQLIEKPRDVQKLI-- 339

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFENFNRILTIPNVKVEDQGEYIC 468
                D +  EC A G P PSY W + G  L P     +  N  L+I  + + D G Y C
Sbjct: 340 ----DDSLVWECKATGKPKPSYRWMKNGENLEPSEERIQVANGALSISRLTLSDTGMYQC 395

Query: 469 RASNDRSALESSVTISIQA-EPNFTIPLTDKHMDNQA--DLTWTCEAFGVPDVTYSWFRN 525
            A N      S+  + + A  P+F+          +A  D    C+    P    SW + 
Sbjct: 396 VAGNKHGEAYSNAELRVIAVAPDFSQNQLKSQTLVKAGGDALIECKPKMSPWGVVSWRKG 455

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLT 584
            +       PL + +R  I  N  ++R  N  + D  +Y C A+NQ     S+  L V  
Sbjct: 456 SD-------PLRESNRISILANG-SLRIWNATKSDAGLYTCIARNQFGVASSTGTLSVK- 506

Query: 585 LKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--- 640
            +P+    P  + +   GE   +    + + + + KF W  +  +I  G     FE    
Sbjct: 507 -EPTIITTPPSTLDVTVGESMVLPCQVSHDPSLELKFTWFFNEQLIHFGSHGGFFEKVGG 565

Query: 641 ----GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
               G+++I  +    +G Y+C              LIV   P     +  +  I    +
Sbjct: 566 QHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIALDLIVRGPPGPPTSVHVEEIIDTTAS 625

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
           L  R        +    I       +G   +  +  P + + G  L  T    +   EYE
Sbjct: 626 LSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTV--PEV-VAGHQLRATVTELSPWVEYE 682

Query: 757 --CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGR 806
              +  +T+G     K S +       P   P  V      ++   I W    +   NG 
Sbjct: 683 FRVLASNTIGTGEPSKPSKQARTKGTYPKVTPANVSGGGGSRSELVITWEPVPEEFQNG- 741

Query: 807 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           P   Y +  R +  + W   +  V   E  RY  + E+     + P+S +  KV   N  
Sbjct: 742 PGFGYVVAFRPHGATGWMQAA--VPTAEASRYVFKNES-----IQPFSPFHVKVGVYNNE 794

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G G P  P     +  ++P +AP+R+        ++ +SW+ LP        + +++ + 
Sbjct: 795 GEG-PFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVSWKALPWSVSKRRVLGFEVRYW 853

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +++ E  +   +  GN    V+R       T Y + V+A N  G GP S
Sbjct: 854 SRSEKEDMASVQRTVGNQTSTVIR--GVKGSTTYYISVRAYNTAGTGPPS 901


>gi|449269777|gb|EMC80528.1| Contactin-5, partial [Columba livia]
          Length = 985

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 258/793 (32%), Positives = 371/793 (46%), Gaps = 52/793 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P DV+F          ++L+C A G P P+Y W +            ID  SD
Sbjct: 7   GPVFVQEPDDVIFPTDSEE--KKVSLNCQARGNPTPTYRWLRN--------GTEIDIESD 56

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            RF+L  G+LII DP +++D G Y C  SN FG+I+S    L F            EI  
Sbjct: 57  YRFSLIEGSLIIKDPSEMKDSGQYQCLTSNMFGTILSREAVLQFACECSVLESEGSEI-- 114

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
                              Y W  + FP+FV ED R F+S + G LY S ++  D G+Y 
Sbjct: 115 ------------------IYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYI 156

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP 427
           C V++ V++     P  PL    +   Q      N    +      G  V +EC A G P
Sbjct: 157 CLVKNTVTNARVLSPPTPL-TLRNDGIQNDDMTKNIQYLYRLHLLKG--VNMECFALGNP 213

Query: 428 VPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           VP+ +W +     P  A       +L IPNV++ED G Y C+A N R        + +  
Sbjct: 214 VPTISWRKVNGHNPSKARLRKSQAVLEIPNVQLEDAGVYECKAENSRGRNVFRGQLQVYT 273

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
            P++   L D  +D+   L W C+A G P  TY W +NG       +PL  Q R  + + 
Sbjct: 274 YPHWVEKLNDTQLDSGDQLRWECKATGKPRPTYRWLKNG-------VPLWPQSRIEMVNG 326

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
           VL I  +N   D  MYQC A+N+  T Y+SA+L++L   P+F    +       +G  V 
Sbjct: 327 VLMIHSVN-LSDAGMYQCLAENKYGTIYASAELKILASAPTFPLNQMRKTIIVTKGQEVV 385

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
           I C P+A+PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV G  
Sbjct: 386 IECKPQASPKPTITWKKGDKALRENKRITILPHGSLRILNASKSDEGRYLCQGVNVFGSA 445

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMD 726
           E    + V   P+  E  P KI +    ++ L C A  +  LDV + WT NG  I    +
Sbjct: 446 EIIASVSVKE-PTRMELTPKKIELMVGESVVLSCKALHDSTLDVTFYWTLNGQPIDFEKE 504

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
               E+         L I N     AG Y C V++    +S +T ++V GPPG PG V V
Sbjct: 505 GGHFESIKAQASSADLMIRNILLTHAGRYGCRVQTAADTVSDETELLVRGPPGPPGVVIV 564

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEAS 845
            E+  T+AT+ W+ GA N  PI+ Y + AR+ ++  W  V      K V +  +G  E++
Sbjct: 565 EEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGWQTV------KTVPEVISGDMESA 618

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
           +   L PW  YEF+V+A N++G G+PS+PS    T    P   P+ + G  G+  +L I+
Sbjct: 619 MAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTNEAVPKTPPANVSGRSGRRHELVIA 678

Query: 906 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
           WEP+  E QN     Y + +R  N T    E +    +    + R  S    T +EVKV 
Sbjct: 679 WEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVG 737

Query: 966 AINDVGPGPESEV 978
             N+ G GP S +
Sbjct: 738 VYNNKGDGPFSPI 750


>gi|327271269|ref|XP_003220410.1| PREDICTED: contactin-2-like [Anolis carolinensis]
          Length = 1036

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 271/803 (33%), Positives = 392/803 (48%), Gaps = 49/803 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + +F   + S    I L+C A   P  +Y W        +L    I   ++
Sbjct: 31  GPVFEEQPRNTLF--PEGSSEEQILLTCQARASPPATYRW--------KLNGTEIKIETN 80

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R+ L+GGNL+I++P +++D G Y C ASN  G+++S    + FGF+ EF+ + R P  G
Sbjct: 81  SRYRLNGGNLVISNPVKLKDAGFYQCVASNSVGTVVSREAYVRFGFLQEFSTEERDPVRG 140

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNY 366
            + WG    C PP ++PG+ Y W  + FPNF+  D+R F+S   G LY +  E  D GNY
Sbjct: 141 TEGWGVMFTCSPPPHFPGIEYRWFVNDFPNFISTDRRRFISQATGNLYIAKTEASDLGNY 200

Query: 367 SC-------NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRL 419
           SC       + +  V  T            P++   + KFP++   TF     AG  V L
Sbjct: 201 SCFATGHIDSFKKSVFSTSSQLSLVREDSRPYAPTIKAKFPSD---TFA---LAGQLVSL 254

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC AFG PVP   W +      +++ +     +L    V  ED+G Y C A N +     
Sbjct: 255 ECFAFGNPVPQIRWRKLDGG--QSSRWITTEPLLEFKEVSFEDEGTYECEAENIQGKDTY 312

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              I IQA+P +   ++DK  D  ADL W+C A G P  T  W RNG        PL  Q
Sbjct: 313 RGRIIIQAQPEWLKVISDKEADIGADLHWSCAAAGKPRPTIRWLRNGR-------PLTSQ 365

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           +R  +    L I  L  + D  MYQC  +N+  + Y+SA+L V    P F+  P+     
Sbjct: 366 NRIEVNGGDLRIFKLTMD-DSGMYQCVGENKHGSTYASAELYVQAFAPDFRLNPVRRLIP 424

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
           A  GG + I C P+AAPK   +W K   ++ +G R  I  +G L+I  +S+ D G Y+C 
Sbjct: 425 AARGGEIIIHCQPKAAPKANIIWTKGTELLNNGSRITITPSGTLIIRNISKSDEGKYTCF 484

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
           A N  G   S G L V    +     P    I    N+ L+C A  +  +D+ + W  + 
Sbjct: 485 AENFMGKANSTGTLSV-RDATKITLAPSSADINVGENITLKCHASHDPTMDLTFTWCLDD 543

Query: 720 VRIGNMDLNELE----TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
           + I   D+++ E      +   + G L + NA    AG Y C  ++ V   S   T++V 
Sbjct: 544 LLI---DISKSEGHYKRASTKENIGDLMVLNAQLKHAGRYTCTAQTVVDSASESATLVVR 600

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGG+ V ++  T+  + W+ G  N  PI  Y I  RT   S W     +    E 
Sbjct: 601 GPPGPPGGLVVTDIKDTTVQLSWSRGFDNHSPIAKYVIQVRTPIFSHWKQARTNPANIE- 659

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS + GG
Sbjct: 660 ----GNSETAQVGNLIPWMDYEFRVLASNILGVGEPSMPSAKIRTKEAAPTVAPSGLNGG 715

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L I+W P+ RE QN     Y + +RK+    +++ T+    ++   V R  S  
Sbjct: 716 GGAPGELIINWTPMQREYQNGDGFGYNLTFRKEGTQVWKTATVLGAESLHY-VYRNESIA 774

Query: 956 YYTEYEVKVQAINDVGPGPESEV 978
            YT +EVK++A N  G GPES V
Sbjct: 775 PYTPFEVKIKAFNKKGEGPESLV 797



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 190/810 (23%), Positives = 295/810 (36%), Gaps = 123/810 (15%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           +P   Y WF  D+       N I     +  + + GNL I    +  D G+Y C A+   
Sbjct: 156 FPGIEYRWFVNDF------PNFISTDRRRFISQATGNLYIAK-TEASDLGNYSCFATGHI 208

Query: 281 GS----IISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
            S    + S S QL+   + E +   AP I      KA F        G         F 
Sbjct: 209 DSFKKSVFSTSSQLSL--VREDSRPYAPTI------KAKFPSDTFALAGQLVSLECFAFG 260

Query: 337 NFVEEDK---------RVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFF 384
           N V + +           +++ +  L F  +   D G Y C   N+Q K +  GR     
Sbjct: 261 NPVPQIRWRKLDGGQSSRWITTEPLLEFKEVSFEDEGTYECEAENIQGKDTYRGR----- 315

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
              +   +  + LK  ++      +    G  +   C A G P P+  W R G PL    
Sbjct: 316 ---IIIQAQPEWLKVISD------KEADIGADLHWSCAAAGKPRPTIRWLRNGRPLTSQN 366

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKHM--D 501
             E     L I  + ++D G Y C   N   +  +S  + +QA  P+F +    + +   
Sbjct: 367 RIEVNGGDLRIFKLTMDDSGMYQCVGENKHGSTYASAELYVQAFAPDFRLNPVRRLIPAA 426

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDP 560
              ++   C+    P     W +  ELLN       +  R  I     L IR ++ + D 
Sbjct: 427 RGGEIIIHCQPKAAPKANIIWTKGTELLN-------NGSRITITPSGTLIIRNIS-KSDE 478

Query: 561 AMYQCRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 615
             Y C A+N +    S+  L V     +TL PS       ++   GE  N+T+ C+    
Sbjct: 479 GKYTCFAENFMGKANSTGTLSVRDATKITLAPS------SADINVGE--NITLKCHASHD 530

Query: 616 PKP--KFVWKKDGNII------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGM 666
           P     F W  D  +I      G   R    EN G+L++       +G Y+CTA  V   
Sbjct: 531 PTMDLTFTWCLDDLLIDISKSEGHYKRASTKENIGDLMVLNAQLKHAGRYTCTAQTVVDS 590

Query: 667 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 726
                 L+V   P     L   +T      +QL  S   +    +A         I +  
Sbjct: 591 ASESATLVVRGPPGPPGGL--VVTDIKDTTVQLSWSRGFDNHSPIAKYVIQVRTPIFS-H 647

Query: 727 LNELETPNINIDGGLLEITNASFADAG--------EYECVVKSTVG---------KISTK 769
             +  T   NI+G      N+  A  G        E+  +  + +G         KI TK
Sbjct: 648 WKQARTNPANIEG------NSETAQVGNLIPWMDYEFRVLASNILGVGEPSMPSAKIRTK 701

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNV 826
                  P   P G+           I WT       NG     Y +  R      W   
Sbjct: 702 EA----APTVAPSGLNGGGGAPGELIINWTPMQREYQNGDGF-GYNLTFRKEGTQVWKTA 756

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
           +  V+G E   Y  R E+     + P++ +E K+ A N+ G G P S     ++  ++P 
Sbjct: 757 T--VLGAESLHYVYRNES-----IAPYTPFEVKIKAFNKKGEG-PESLVSIVHSAEEEPR 808

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946
            APS I        ++ I+W  +     N   + Y+I + K  D E  ++ ++  G V  
Sbjct: 809 VAPSNITVNSVMATEMDITWNSVEDHDMNGVLLGYEIRYWKHGDKEEAADRVRTAGLVSS 868

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           A   +      T+Y V V+A N  G GP S
Sbjct: 869 A--HVTDLHPNTKYHVAVRAYNRAGTGPAS 896


>gi|395516504|ref|XP_003762427.1| PREDICTED: contactin-6 [Sarcophilus harrisii]
          Length = 1017

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 252/799 (31%), Positives = 385/799 (48%), Gaps = 40/799 (5%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + I +GP F ++P D+++ L+     +++ L+C A GYP P+Y W +            I
Sbjct: 9   NDILQGPSFTQEPQDIMYSLNMEH--SEVILNCAANGYPIPNYRWKQN--------GTDI 58

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D      + L GG+L I++P + +  G+Y C A+N  G+I+S+  +L F +I  F  K  
Sbjct: 59  DFTMSYHYRLIGGSLAISNPYKAQAIGTYQCLATNPLGTILSQKAKLQFAYIENFETKTR 118

Query: 304 PEIGN-QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +      G  + C PP  +  V Y W  +  P  V+ED R F+S + G LY + +E  
Sbjct: 119 STVSVLAGQGVVLLCGPPPFFGDVYYAWTFNDHPLPVQEDSRRFISQETGNLYIAKVEPS 178

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V +  +     GP  PL +       +   K    FP+T   A   G  V+L
Sbjct: 179 DVGNYTCFVTNMQAQKRIQGPPTPLVLRNDGVMGEYEPKIEVRFPETVQAA--KGSTVKL 236

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+ +W R  GSPL R   +      + IPN + ED+G Y C A N R    
Sbjct: 237 ECFALGNPVPNISWRRLDGSPLARKIEYSKSKGTIGIPNFQQEDEGSYECIAGNLRGRNI 296

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   + + A P +   +    +     L W C A G P  +Y W +NGE       P+  
Sbjct: 297 ARGQLFLYAPPEWDKKIQTTDLSIYDPLFWECRASGKPIPSYVWLKNGE-------PIVP 349

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           ++R  I++  L I  LN   D   YQC A+N+ +T Y++A+LRV    P F K P++  +
Sbjct: 350 EERIQIENGSLVITMLNVS-DSGFYQCVAENKYQTIYANAELRVRASAPDFSKNPMQKIS 408

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG+V I C P+A+P+    W K   +I    R  I E+G+L I  V++ D+G Y+C
Sbjct: 409 VVQVGGDVVIECKPKASPRAMISWAKGSEMIRQSKRFFILEDGSLKIYNVTKLDAGTYTC 468

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N  G+ ++ G L++    +     PP++ +    ++ L C    +  ++V + W  N
Sbjct: 469 IAMNQFGIAKTSGNLVIKER-TIITVPPPQMDVTVGESIVLPCQVFHDPSIEVVFTWYLN 527

Query: 719 GVRIGNMDLNELETPNINIDGGL----LEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
               GN+   +   P+    GG     L I       +G+Y C+V++T+  +S    +IV
Sbjct: 528 ----GNVIDFQRGVPHFERIGGESVGDLMIREIQLNHSGKYVCMVETTLDNLSAVADIIV 583

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG P  V++  +  T++ + W  G  N  PI  Y I  RT ++  W  VS       
Sbjct: 584 RGPPGPPSNVRIENISSTTSQLCWRPGIDNNSPIQIYTIQTRTPFSVGWLAVSTI----- 638

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
            +   G+   +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP+ IGG
Sbjct: 639 PEILNGKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSQPSKLLRTKAAVPVVAPTTIGG 698

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG   +L I+WE +P E QN     Y I +R      +   ++         V R  S 
Sbjct: 699 GGGSQSELVITWESIPEELQNGEGFGYIIMFRPVGSLTWTKASVSSV-EASKYVYRNESL 757

Query: 955 FYYTEYEVKVQAINDVGPG 973
              + +EVKV   N+ G G
Sbjct: 758 IPLSPFEVKVGVYNNEGEG 776



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 141/590 (23%), Positives = 226/590 (38%), Gaps = 55/590 (9%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  EC A G P+PSY W + G P+      +  N  L I  + V D G Y C A N  
Sbjct: 322 DPLFWECRASGKPIPSYVWLKNGEPIVPEERIQIENGSLVITMLNVSDSGFYQCVAENKY 381

Query: 475 SALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + ++  + ++A  P+F+     K    Q   D+   C+    P    SW +  E++  
Sbjct: 382 QTIYANAELRVRASAPDFSKNPMQKISVVQVGGDVVIECKPKASPRAMISWAKGSEMI-- 439

Query: 532 ETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
                    R+FI +D  L I Y   + D   Y C A NQ     +S  L V+  +    
Sbjct: 440 -----RQSKRFFILEDGSLKI-YNVTKLDAGTYTCIAMNQFGIAKTSGNL-VIKERTIIT 492

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GN 642
             P + +   GE  ++ + C     P  +  F W  +GN+I        FE       G+
Sbjct: 493 VPPPQMDVTVGE--SIVLPCQVFHDPSIEVVFTWYLNGNVIDFQRGVPHFERIGGESVGD 550

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L+I  +  + SG Y C          +   +IV   P     +  +   +    L  R  
Sbjct: 551 LMIREIQLNHSGKYVCMVETTLDNLSAVADIIVRGPPGPPSNVRIENISSTTSQLCWRPG 610

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
                 + +  I T     +G + ++ +  P I ++G +   T        EYE   V  
Sbjct: 611 IDNNSPIQIYTIQTRTPFSVGWLAVSTI--PEI-LNGKMHTATVVGLNPWVEYEFRVVAG 667

Query: 761 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
           +++G          + TK  V V  P  + GG       ++   I W    +   NG   
Sbjct: 668 NSIGIGEPSQPSKLLRTKAAVPVVAPTTIGGGGG----SQSELVITWESIPEELQNGEGF 723

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y I+ R   + TW   S  V   E  +Y  R E+     L+P S +E KV   N  G 
Sbjct: 724 -GYIIMFRPVGSLTWTKAS--VSSVEASKYVYRNES-----LIPLSPFEVKVGVYNNEGE 775

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           G   SP+    +  D+P  AP+          ++ ISW  +   +     + Y++ +  +
Sbjct: 776 GT-LSPATIVYSGEDEPQLAPTGASVQSFSASEVDISWNSIAWNRSTGRVLGYEVLYWTE 834

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +  E  S  ++  GN  I    I      T Y   V+A N  G GP S++
Sbjct: 835 DSKETSSGKIRVSGN--ITTKSITGLKANTLYFATVRAYNTAGTGPSSDL 882


>gi|327272946|ref|XP_003221245.1| PREDICTED: contactin-1-like [Anolis carolinensis]
          Length = 1030

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 260/792 (32%), Positives = 387/792 (48%), Gaps = 38/792 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D V+   + S    +T++C A G P P+Y+W   ++  D  +A        
Sbjct: 50  GPIFEEQPIDTVY--PEESPEGRVTMNCRARGIPTPTYKWQHNNWDIDIKMAK------- 100

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN-LKRAPEIG 307
           +   + GGNL IN+P +  D G Y C A N  G+I S    L FG++  F   +R P   
Sbjct: 101 EHHIMVGGNLEINNPEKSRDEGKYVCIAYNVHGTIRSREATLNFGYLYPFTPEERHPVKV 160

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + C+PP +YP  ++Y W  + FP F+  DKR +VS  +G LY + +E  D GN
Sbjct: 161 KEGVGAVLLCNPPPHYPDDLSYRWVLNDFPEFITLDKRRYVSQSNGNLYIAKVEASDKGN 220

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
           YSC V S          F PL   P ++  +   P+   K        G  V LEC A G
Sbjct: 221 YSCFVTSNSITKSVFSSFIPL--IPQADRSKGYLPDIRVKFKDIYALLGQNVTLECFALG 278

Query: 426 YPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485
            PVP   W +   P+P +A       +L I N++ ED+G Y C A N R   + S  + +
Sbjct: 279 NPVPEIRWNKYLEPMPTSAEISMSGAVLRIYNIQFEDEGTYECEAENHRGKDKHSAKVYV 338

Query: 486 QAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ 545
           QA P +   + D   D  ++  W C A   P  T  W ++G       +P    D  F  
Sbjct: 339 QAYPEWVEHINDTERDLGSEFHWPCVAAAKPLPTIRWLKDG-------IPYWKGDLRFSS 391

Query: 546 DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN 605
                        D  MYQC A+N     YS+A+L+V+ L P+F+  P++ E  A  GG 
Sbjct: 392 LK---------NEDSGMYQCVAENIHGMIYSNAELKVIVLAPTFEYYPMKKEVLAARGGQ 442

Query: 606 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 665
             I C P AAP+PK  W K   I+ +  R +I+ +G+L I  V+  D+G Y+C   N  G
Sbjct: 443 AIIECKPRAAPRPKLTWSKGAYILKNTTRTRIWYDGSLEILNVTAADAGNYTCFVENFKG 502

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 725
              S   L+    P+  +  P  I +   +N  L+C A  +  LD+ +IW  NG  +   
Sbjct: 503 KANSSSTLVTT-APTRIDLAPTNIDVIVGQNATLQCHALHDPSLDLTFIWLLNGYPVDVD 561

Query: 726 DLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
             ++    +I I + G L +  A    AG Y CV ++ V   +    ++V GPPG PGG+
Sbjct: 562 KESDYYERSIMIKNNGELIVKYAQLRHAGRYTCVAQTIVDNATASADLVVRGPPGPPGGL 621

Query: 785 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
           +V E+  TS  + W+ G  N  PI++Y I +RT  +  W ++       +     G  E+
Sbjct: 622 KVEEIKNTSVVLTWSRGTDNHSPISNYTIQSRTFLSEYWKDMK-----TDPPLVEGNVES 676

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
           +    L+PW  YEF+++A N LG GEPS PSP   T    P  APS +GGGGG   +L+I
Sbjct: 677 AKVIDLIPWMEYEFRIMATNILGTGEPSMPSPIIQTEGSPPNVAPSEVGGGGGSNRELTI 736

Query: 905 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 964
           +W PLPRE     N  Y + ++  +  E++  T+ +   +G  V +  S    + Y+VKV
Sbjct: 737 TWVPLPREYHFGNNFGYVVAFKSFDQKEWKRVTVPQ-PEIGRYVHKDESMPPSSRYQVKV 795

Query: 965 QAINDVGPGPES 976
           +A N+ G GP S
Sbjct: 796 RAFNNKGEGPFS 807


>gi|441633559|ref|XP_003252559.2| PREDICTED: contactin-1 [Nomascus leucogenys]
          Length = 1017

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 270/840 (32%), Positives = 415/840 (49%), Gaps = 54/840 (6%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQASPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL-- 742
            P    I    N  ++C+A  +  LD+ ++W+ NG  I   D N+    NI+     +  
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFVWSFNGYVI---DFNK---ENIHYQRNFMMI 563

Query: 743 --EITNASFADAGEYECVVKSTVGKISTKTTVIVEG--PPGLPGGVQVVEVHKTSATIQW 798
             EI   + + + E     +  +G    +   I     PPG PGG+++ ++  TS  + W
Sbjct: 564 AAEIHVVTLSASPEQSPDRRLNLGTHHLRFQFIPSNNGPPGPPGGLRIEDIRATSVALTW 623

Query: 799 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
           + G+ N  PI+ Y I  +T  +  W +        +     G  EA+    L+PW  YEF
Sbjct: 624 SRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEF 678

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           +V+A N LG GEPS PS +  T    P  APS +GGGGG+  +L+I+W PL RE     N
Sbjct: 679 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 738

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             Y + ++  +  E++  T+    + G  V +  +    T ++VKV+A N+ G GP S V
Sbjct: 739 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 797



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 12/149 (8%)

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
           V   +  RY  + E      + P + ++ KV A N  G G P S     N+  D P +AP
Sbjct: 758 VTNPDTGRYVHKDET-----MSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAP 811

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           + +G       ++S+ WE +  +   +  I Y     K+        T +EY        
Sbjct: 812 TEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------A 865

Query: 950 RIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           R+ +    T+Y ++V A N  G GP S++
Sbjct: 866 RLENLLPDTQYFIEVGACNSAGCGPPSDM 894


>gi|109732265|gb|AAI15767.1| Contactin 4 [Mus musculus]
          Length = 705

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 234/698 (33%), Positives = 350/698 (50%), Gaps = 34/698 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P   + G  V+LEC A 
Sbjct: 193 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  +DR  
Sbjct: 311 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLTRDRIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+   P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+P+P + W+K   I+    R  I E+GNL I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G  +V+  P+     P  + +    ++ L C    +  LD+ + WT NG  I 
Sbjct: 483 FGTASSTGN-VVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 542 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W       +    D   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             +    L PW  YEF+ +A N +G GEPS PS +  T
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694


>gi|403270507|ref|XP_003927218.1| PREDICTED: contactin-4 [Saimiri boliviensis boliviensis]
          Length = 1004

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 257/801 (32%), Positives = 384/801 (47%), Gaps = 61/801 (7%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DIGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 ARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGE-------PLLT 358

Query: 539 QDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           QD+  I  + N      L P   P                        + P F +  L+ 
Sbjct: 359 QDKLQIWGKLNFQGTLALLPSPKP------------------------VGPDFSRTLLKR 394

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
            T    GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y
Sbjct: 395 VTLVKVGGEVVIECKPKASPKPAYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSY 454

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN  G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+
Sbjct: 455 TCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWS 513

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            NG  I  + D +  E    +  G L+ I N     AG+Y C+V+++V ++S    +IV 
Sbjct: 514 FNGHLIDFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVR 572

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG P  V + E+  T+  + W  G  N  PIT Y I ART ++  W  VS   + + +
Sbjct: 573 GPPGPPEAVTIDEITDTTVQLSWIPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELI 630

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
           D   G+   +    L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GG
Sbjct: 631 D---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGG 687

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG   +L I+WE +P E QN     Y + +R      +    L    +    V R  S  
Sbjct: 688 GGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVR 746

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            ++ +EVKV   N+ G GP S
Sbjct: 747 PFSPFEVKVGVFNNKGEGPFS 767



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 141/651 (21%), Positives = 231/651 (35%), Gaps = 84/651 (12%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 277 NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      + +         K+  QG     
Sbjct: 332 ------NVFWECKANGRPKPTYRWLKNGEPLLTQDKLQIWG--------KLNFQGTL--- 374

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
                + L S   +     P+F+  L  +   +    ++   C+    P   Y+W +  +
Sbjct: 375 -----ALLPSPKPVG----PDFSRTLLKRVTLVKVGGEVVIECKPKASPKPAYTWKKGRD 425

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           +L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+   
Sbjct: 426 IL-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKDP 476

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------ 640
                 P   +   GE   +      + +    F W  +G++I        FE       
Sbjct: 477 TRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSA 536

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G+L+I  +    +G Y C          +   LIV   P      P  +TI    +  ++
Sbjct: 537 GDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP----PEAVTIDEITDTTVQ 592

Query: 701 CS----AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
            S          + +  I       +G   ++ +  P + IDG     T        EYE
Sbjct: 593 LSWIPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYE 649

Query: 757 --CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGR 806
              V  + +G     + S K       P   P  V      K+   I W    +   NGR
Sbjct: 650 FRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGR 709

Query: 807 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
               Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  
Sbjct: 710 GF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNK 761

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FW 925
           G G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +W
Sbjct: 762 GEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYW 819

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           R + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 820 RHE-DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 867


>gi|157909805|ref|NP_766592.2| contactin-4 isoform 2 precursor [Mus musculus]
 gi|157909814|ref|NP_001103221.1| contactin-4 isoform 2 precursor [Mus musculus]
          Length = 705

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 234/698 (33%), Positives = 350/698 (50%), Gaps = 34/698 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        ++    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KINGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P   + G  V+LEC A 
Sbjct: 193 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  +DR  
Sbjct: 311 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLTRDRIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+   P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+P+P + W+K   I+    R  I E+GNL I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G +IV   P+     P  + +    ++ L C    +  LD+ + WT NG  I 
Sbjct: 483 FGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 542 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W       +    D   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             +    L PW  YEF+ +A N +G GEPS PS +  T
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694


>gi|426339220|ref|XP_004033556.1| PREDICTED: contactin-6 isoform 2 [Gorilla gorilla gorilla]
          Length = 956

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 244/737 (33%), Positives = 364/737 (49%), Gaps = 28/737 (3%)

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-N 308
            + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K    +   
Sbjct: 4   HYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVR 63

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
           +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GNY+
Sbjct: 64  EGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYT 123

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFG 425
           C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A G
Sbjct: 124 CFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALG 181

Query: 426 YPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R    +   + 
Sbjct: 182 NPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI 241

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E       +R  I
Sbjct: 242 FYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQI 294

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           ++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ +++   GG
Sbjct: 295 ENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 353

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           ++ I C P A P+    WK+    +    R  + E+G+L I  ++R D+G Y+C ATN  
Sbjct: 354 DIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQF 413

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W  NG  I  
Sbjct: 414 GTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI-- 470

Query: 725 MDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
            DL +       I G   G L I N     +G+Y C V++T+  +S    +IV GPPG P
Sbjct: 471 -DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPP 529

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +    +   G+
Sbjct: 530 EDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGK 584

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG   +
Sbjct: 585 TYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGGSRSE 644

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+WE +P E QN     Y I +R    T +  E +    +    V R  S    + +E
Sbjct: 645 LVITWESIPEELQNGDGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFE 703

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G G  S V
Sbjct: 704 VKVGVYNNEGEGSLSTV 720



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 292/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 82  SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 130

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 131 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 189

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 190 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 241

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 242 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 293

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 294 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 353

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 354 DIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSYT 406

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 407 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 463

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 464 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 523

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 524 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 580

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 581 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGG 640

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 641 ----SRSELVITWESIPEELQNGDGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 693

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 694 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 747

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 748 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 805

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 806 SVRAYNTAGTGPSS 819



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 112/299 (37%), Gaps = 46/299 (15%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI +++   C A G PNP Y W K     +RL     +P  ++R  +  G LII     V
Sbjct: 258 SIYDNLLWECKASGKPNPWYTWLKNG---ERL-----NP--EERIQIENGTLIITM-LNV 306

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNY 323
            D G Y C A NK+  I + +         +F+   +K+   +  Q  G  +    P  +
Sbjct: 307 SDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFV--QVGGDIVIGCKPNAF 364

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P     W R      + + KR+F+  DG+L    + + DAG+Y+C   ++       G  
Sbjct: 365 PRAAISWKRGT--ETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSL 422

Query: 384 F----PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRRG 437
                 +   P S                     G+ + L C     P     + W   G
Sbjct: 423 IVKERTVITVPPSKMDV---------------TVGESIVLPCQVSHDPSIEVVFVWFFNG 467

Query: 438 SPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
             +       +F RI       L I N+++   G+Y+C       +L +   I ++  P
Sbjct: 468 DVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPP 526



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 133/329 (40%), Gaps = 36/329 (10%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P P   W + D            PL  K    S    I+  P  Q ED
Sbjct: 171 SSVKLECFALGNPVPDISWRRLDG----------SPLPGK-VKYSKSQAILEIPNFQQED 219

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN---QNWGKAMFCDPPTNYPG 325
            G Y C ASN  G  +++  QL F    E+  K    I N     +   ++    +  P 
Sbjct: 220 EGFYECIASNLRGRNLAKG-QLIFYAPPEWEQK----IQNTYLSIYDNLLWECKASGKPN 274

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             Y W ++     +  ++R+ +  +G L  + L   D+G Y C  ++K      N     
Sbjct: 275 PWYTWLKN--GERLNPEERIQIE-NGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRV 331

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA- 444
           L   P  +   +K      K+F +    G  + + C    +P  + +W +RG+   R + 
Sbjct: 332 LASAPDFSKSPVK-----KKSFVQ---VGGDIVIGCKPNAFPRAAISW-KRGTETLRQSK 382

Query: 445 -YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
             F   +  L I N+   D G Y C A+N     +++ ++ ++     T+P +   +   
Sbjct: 383 RIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVG 442

Query: 504 ADLTWTCEAFGVP--DVTYSWFRNGELLN 530
             +   C+    P  +V + WF NG++++
Sbjct: 443 ESIVLPCQVSHDPSIEVVFVWFFNGDVID 471


>gi|426249263|ref|XP_004018369.1| PREDICTED: contactin-6 isoform 2 [Ovis aries]
          Length = 956

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 242/735 (32%), Positives = 364/735 (49%), Gaps = 28/735 (3%)

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-N 308
            + L GG+L I+ PR  +D G+Y C A+N  G+I+S+  +L F +I +F  K    +   
Sbjct: 4   HYRLDGGSLAISSPRTDQDIGTYQCLATNSLGTILSQKAKLQFAYIEDFETKTRSTVSVR 63

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
           +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GNY+
Sbjct: 64  EGQGVVLLCGPPPHFGDLSYAWIFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYT 123

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFG 425
           C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A G
Sbjct: 124 CLITNKEAQRRVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALG 181

Query: 426 YPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP  +W R  GSPLP    +      L IPN + ED+G Y C ASN R    +   + 
Sbjct: 182 NPVPDISWRRLDGSPLPGKVKYSKSQATLEIPNFQQEDEGFYECIASNLRGRNLAKGQLI 241

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             A P +   + + ++     L W C+A G PD  Y+W +NGE LN E       +R  I
Sbjct: 242 FYAPPEWEQKIQNTYLSIYDSLFWECKASGKPDPWYTWLKNGERLNPE-------ERIQI 294

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           ++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K PL+  +    GG
Sbjct: 295 ENGTLIITMLNVS-DSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQVGG 353

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           ++ I C P A P+    WK+    +    R  + E+G+L I  V+R D+G+Y+C ATN  
Sbjct: 354 DIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRSDAGVYTCIATNQF 413

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G+ ++ G LI+    +     P K+ +    ++ L C    +  ++V ++W+ NG  I  
Sbjct: 414 GVAKNTGSLIIKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI-- 470

Query: 725 MDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
            D  +       I G   G L I N     +G+Y C VK+T+  +S    +IV GPPG P
Sbjct: 471 -DFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPGPP 529

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V  +   S  + W  G+ N  PI  + I ART ++  W       +    +   G+
Sbjct: 530 EDVRVTHISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGW-----QAVSTVPEILNGK 584

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP+ I GGGG   +
Sbjct: 585 TFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGGSRSE 644

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+WE +P E QN  +  Y +  R    T +  E +    +    + R  +    + +E
Sbjct: 645 LIITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIPLSPFE 703

Query: 962 VKVQAINDVGPGPES 976
           VKV   N  G GP S
Sbjct: 704 VKVGVYNKEGEGPLS 718



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 296/794 (37%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 82  SYAWIFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCLITNKE 130

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 131 AQRRVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 189

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 190 RRLDGSPLPGKVKYSKS-----QATLEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 241

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 242 FYAPPEWEQ-KIQNTYLSIY-------DSLFWECKASGKPDPWYTWLKNGERLNPEERIQ 293

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 294 IENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQVGG 353

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P  T SW R  E L       + +  + ++D  L I Y     D  +Y 
Sbjct: 354 DIVIECKPNAFPRATISWKRGIESLR------QSKRVFLLEDGSLKI-YNVTRSDAGVYT 406

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ     ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 407 CIATNQFGVAKNTGSL-IIKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 463

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +  + SG Y CT         + G +IV 
Sbjct: 464 SFNGDVIDFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVR 523

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +      +A   L  R  +     + +  I       +G   ++ +  P I 
Sbjct: 524 GPPGPPEDVRVTHISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTV--PEI- 580

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T  +     EYE   V  +++G          + TK +V    P  + GG  
Sbjct: 581 LNGKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGG 640

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y ++ R   ++TW    E V   E  R+  R 
Sbjct: 641 ----SRSELIITWESIPEELQNGEDF-GYIVMLRPVGSTTW--TKERVPSVESSRFIYRN 693

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E      ++P S +E KV   N+ G G  S+ S  Y+   D+P  AP           ++
Sbjct: 694 EN-----IIPLSPFEVKVGVYNKEGEGPLSTASIIYSG-EDEPQLAPRGTSVQSFSASEM 747

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GN  I    I      T Y  
Sbjct: 748 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGN--ITTKNITGLKANTVYFA 805

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 806 SVRAYNTAGTGPSS 819



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 120/318 (37%), Gaps = 45/318 (14%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI + +   C A G P+P Y W K     +RL     +P  ++R  +  G LII     V
Sbjct: 258 SIYDSLFWECKASGKPDPWYTWLKNG---ERL-----NP--EERIQIENGTLIITM-LNV 306

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNY 323
            D G Y C A NK+  I + +         +F+   LK+   +  Q  G  +    P  +
Sbjct: 307 SDSGIYQCAAENKYQIIYANAELRVLASAPDFSKNPLKKYSVV--QVGGDIVIECKPNAF 364

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P     W R      + + KRVF+  DG+L    + + DAG Y+C   ++       G  
Sbjct: 365 PRATISWKRGI--ESLRQSKRVFLLEDGSLKIYNVTRSDAGVYTCIATNQFGVAKNTG-- 420

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAP---KAGDKVRLECVAFGYPVPS--YNWTRRGS 438
                        L        T P +      G+ + L C     P     + W+  G 
Sbjct: 421 ------------SLIIKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGD 468

Query: 439 PLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 491
            +       +F RI       L I N+++   G+Y+C       +L +   I ++  P  
Sbjct: 469 VIDFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPGP 528

Query: 492 TIPLTDKHMDNQA-DLTW 508
              +   H+ + +  L+W
Sbjct: 529 PEDVRVTHISSASCQLSW 546



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 134/328 (40%), Gaps = 34/328 (10%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVED 268
           + + L C+A G P P   W + D            PL  K +++ S   L I + +Q ED
Sbjct: 171 SSVKLECFALGNPVPDISWRRLDG----------SPLPGKVKYSKSQATLEIPNFQQ-ED 219

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWG--KAMFCD-PPTNYPG 325
            G Y C ASN  G  +++  QL F    E+  K    I N       ++F +   +  P 
Sbjct: 220 EGFYECIASNLRGRNLAKG-QLIFYAPPEWEQK----IQNTYLSIYDSLFWECKASGKPD 274

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             Y W ++     +  ++R+ +  +G L  + L   D+G Y C  ++K      N     
Sbjct: 275 PWYTWLKN--GERLNPEERIQIE-NGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRV 331

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA- 444
           L   P        F  N  K +      GD V +EC    +P  + +W R    L ++  
Sbjct: 332 LASAPD-------FSKNPLKKYSVVQVGGDIV-IECKPNAFPRATISWKRGIESLRQSKR 383

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
            F   +  L I NV   D G Y C A+N     +++ ++ I+     T+P +   +    
Sbjct: 384 VFLLEDGSLKIYNVTRSDAGVYTCIATNQFGVAKNTGSLIIKERTVITVPPSKMDVTVGE 443

Query: 505 DLTWTCEAFGVP--DVTYSWFRNGELLN 530
            +   C+    P  +V + W  NG++++
Sbjct: 444 SIVLPCQVSHDPSIEVVFVWSFNGDVID 471


>gi|397522457|ref|XP_003831283.1| PREDICTED: contactin-6 isoform 2 [Pan paniscus]
          Length = 956

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 244/737 (33%), Positives = 364/737 (49%), Gaps = 28/737 (3%)

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-N 308
            + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K    +   
Sbjct: 4   HYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVR 63

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
           +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GNY+
Sbjct: 64  EGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYT 123

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFG 425
           C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A G
Sbjct: 124 CFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALG 181

Query: 426 YPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R    +   + 
Sbjct: 182 NPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI 241

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E       +R  I
Sbjct: 242 FYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQI 294

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           ++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ +++   GG
Sbjct: 295 ENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 353

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           ++ I C P A P+    WK+    +    R  + E+G+L I  ++R D+G Y+C ATN  
Sbjct: 354 DIVIGCKPNAFPRAAISWKRGRETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQF 413

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W  NG  I  
Sbjct: 414 GTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI-- 470

Query: 725 MDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
            DL +       I G   G L I N     +G+Y C V++T+  +S    +IV GPPG P
Sbjct: 471 -DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPP 529

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +    +   G+
Sbjct: 530 EDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGK 584

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG   +
Sbjct: 585 TYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSE 644

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+WE +P E QN     Y I +R    T +  E +    +    V R  S    + +E
Sbjct: 645 LVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFE 703

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G G  S V
Sbjct: 704 VKVGVYNNEGEGSLSTV 720



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 187/794 (23%), Positives = 292/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 82  SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 130

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 131 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 189

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 190 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 241

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 242 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 293

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 294 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 353

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 354 DIVIGCKPNAFPRAAISWKRGRETLR------QSKRIFLLEDGSLKI-YNITRSDAGSYT 406

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 407 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 463

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 464 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 523

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 524 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 580

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 581 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGG 640

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 641 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 693

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 694 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 747

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 748 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 805

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 806 SVRAYNTAGTGPSS 819



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 112/299 (37%), Gaps = 46/299 (15%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI +++   C A G PNP Y W K     +RL     +P  ++R  +  G LII     V
Sbjct: 258 SIYDNLLWECKASGKPNPWYTWLKNG---ERL-----NP--EERIQIENGTLIITM-LNV 306

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNY 323
            D G Y C A NK+  I + +         +F+   +K+   +  Q  G  +    P  +
Sbjct: 307 SDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFV--QVGGDIVIGCKPNAF 364

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P     W R      + + KR+F+  DG+L    + + DAG+Y+C   ++       G  
Sbjct: 365 PRAAISWKRGR--ETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSL 422

Query: 384 F----PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRRG 437
                 +   P S                     G+ + L C     P     + W   G
Sbjct: 423 IVKERTVITVPPSKMDV---------------TVGESIVLPCQVSHDPSIEVVFVWFFNG 467

Query: 438 SPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
             +       +F RI       L I N+++   G+Y+C       +L +   I ++  P
Sbjct: 468 DVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPP 526



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 132/329 (40%), Gaps = 36/329 (10%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P P   W + D            PL  K    S    I+  P  Q ED
Sbjct: 171 SSVKLECFALGNPVPDISWRRLDG----------SPLPGK-VKYSKSQAILEIPNFQQED 219

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN---QNWGKAMFCDPPTNYPG 325
            G Y C ASN  G  +++  QL F    E+  K    I N     +   ++    +  P 
Sbjct: 220 EGFYECIASNLRGRNLAKG-QLIFYAPPEWEQK----IQNTYLSIYDNLLWECKASGKPN 274

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             Y W ++     +  ++R+ +  +G L  + L   D+G Y C  ++K      N     
Sbjct: 275 PWYTWLKN--GERLNPEERIQIE-NGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRV 331

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA- 444
           L   P  +   +K      K+F +    G  + + C    +P  + +W +RG    R + 
Sbjct: 332 LASAPDFSKSPVK-----KKSFVQ---VGGDIVIGCKPNAFPRAAISW-KRGRETLRQSK 382

Query: 445 -YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
             F   +  L I N+   D G Y C A+N     +++ ++ ++     T+P +   +   
Sbjct: 383 RIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVG 442

Query: 504 ADLTWTCEAFGVP--DVTYSWFRNGELLN 530
             +   C+    P  +V + WF NG++++
Sbjct: 443 ESIVLPCQVSHDPSIEVVFVWFFNGDVID 471


>gi|351700526|gb|EHB03445.1| Contactin-2, partial [Heterocephalus glaber]
          Length = 1024

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 280/802 (34%), Positives = 388/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S    +TL C A   P  +Y W        ++    ++    
Sbjct: 20  GPVFEDQPLGLLF--PEESTEEQVTLVCRARASPPATYRW--------KMNGTEMNLGLG 69

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 70  SRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREGVLRFGFLQEFSKEERDPVKA 129

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 130 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 189

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 190 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPAETYALVGQQ 240

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N R 
Sbjct: 241 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSRG 297

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  A+L W C A G P  T  W RNGE       P
Sbjct: 298 RDTVQGRIIVQAQPEWLKVISDTEADIGANLRWGCAAAGKPRPTVRWLRNGE-------P 350

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F++ P+ 
Sbjct: 351 LASQNRVEVSAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVR 409

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG ++I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G 
Sbjct: 410 RLIPAARGGEISIACQPRAAPKATVLWSKGTEILVNSSRLTVTPDGTLVIRNISRSDEGR 469

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + W
Sbjct: 470 YTCFAENFMGKANSTGVLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTW 528

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +         ++    G L I +A     G YEC+ ++ V   S + TV+V
Sbjct: 529 TLDDFPIDFDKPGGHYRRASVKETVGDLTILSAQLRHGGTYECMAQTVVDSASKEATVLV 588

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E
Sbjct: 589 RGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTRPAGKWKQVRTNPANIE 648

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS +GG
Sbjct: 649 -----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSRIRTKEAVPSVAPSGLGG 703

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L ++W P+ RE QN     Y + +R++  + +Q+  +    +    V    S 
Sbjct: 704 GGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNESI 762

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK+++ N  G GPES
Sbjct: 763 RPYTPFEVKIRSYNRRGDGPES 784



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 181/803 (22%), Positives = 294/803 (36%), Gaps = 110/803 (13%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY W   ++       N I P   + F + + GNL I       D G+Y C A+  
Sbjct: 145 YPGLSYRWLLNEF------PNFI-PTDGRHFVSQTTGNLYIAR-TNASDLGNYSCLAT-- 194

Query: 280 FGSIISESVQLAFGFIGEFNLKR------APEIGNQNWGKAMFCDPPTNYPGVNYYWARD 333
             S +  S +  F    + NL        AP I      KA F  P   Y  V      +
Sbjct: 195 --SHMDFSTKSVFSKFAQLNLAAEDPRLFAPSI------KARF--PAETYALVGQQVTLE 244

Query: 334 YFPNFVEEDKRV------------FVSYDGALYFSALEQIDAGNYSCNVQ-SKVSDTGRN 380
            F  F     R+            + + +  L   ++   D G Y C  + S+  DT + 
Sbjct: 245 CF-AFGNPVPRIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSRGRDTVQG 303

Query: 381 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
                 ++   +  + LK  ++           G  +R  C A G P P+  W R G PL
Sbjct: 304 ------RIIVQAQPEWLKVISDTEADI------GANLRWGCAAAGKPRPTVRWLRNGEPL 351

Query: 441 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKH 499
                 E     L    + +ED G Y C A N    + +S  +++QA  P+F      + 
Sbjct: 352 ASQNRVEVSAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRL 411

Query: 500 M--DNQADLTWTCEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNP 556
           +      +++  C+    P  T  W +  E+L NS  L +         D  L IR ++ 
Sbjct: 412 IPAARGGEISIACQPRAAPKATVLWSKGTEILVNSSRLTV-------TPDGTLVIRNIS- 463

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 616
             D   Y C A+N +    S+    VL+++ + K     S      G N+T+ C+    P
Sbjct: 464 RSDEGRYTCFAENFMGKANSTG---VLSVRDATKITLAPSSADINLGDNLTLQCHASHDP 520

Query: 617 KP--KFVWKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMD 667
                F W  D   I     G   RR   +   G+L I        G Y C A  V  +D
Sbjct: 521 TMDLTFTWTLDDFPIDFDKPGGHYRRASVKETVGDLTILSAQLRHGGTYECMAQTV--VD 578

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 727
            +     VL            +       +QL  S   +    +A        R      
Sbjct: 579 SASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTRPAG-KW 637

Query: 728 NELETPNINIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEG 776
            ++ T   NI+G              +YE  V ++             +I TK  V    
Sbjct: 638 KQVRTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSRIRTKEAV---- 693

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           P   P G+           + WT  +    NG     Y +  R   +S+W   +  V G 
Sbjct: 694 PSVAPSGLGGGGGAPGELIVNWTPMSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGA 750

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           +   +    E+     + P++ +E K+ + N  G G P S +    +  ++P  AP+++ 
Sbjct: 751 DTQYFVYSNES-----IRPYTPFEVKIRSYNRRGDG-PESLTATVYSAEEEPRVAPTKVW 804

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
             G    +++++WEP+ ++  N   + Y+I + K  D E  ++ ++  G   +A V    
Sbjct: 805 AKGISSSEMNVTWEPV-QQDMNGVLLGYEIRYWKAGDKEAAADRVRTAGLETLACVT--G 861

Query: 954 EFYYTEYEVKVQAINDVGPGPES 976
               T+Y V V+A N  G GP S
Sbjct: 862 LHPNTKYHVTVRAYNRAGTGPAS 884


>gi|432859190|ref|XP_004069057.1| PREDICTED: contactin-2-like [Oryzias latipes]
          Length = 1182

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 264/801 (32%), Positives = 378/801 (47%), Gaps = 42/801 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F ++P+ +++          +TLSC A   P  SY W         L+     PL  
Sbjct: 180 GPVFEEEPSSLIYPEGLTE--GKVTLSCQARANPAASYRW---------LLNGTEVPLGS 228

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIG 307
           +R TL  GNL+I+ P    D GSY C   N+ G+IIS +  L FG++ +F+   R+P+  
Sbjct: 229 ERHTLVAGNLVISSPEPSRDTGSYQCLVINRCGTIISRAANLKFGYLHDFSPDSRSPQTA 288

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE-EDKRVFVS-YDGALYFSALEQIDAGN 365
            +  G  + C PP +YP ++Y W  + FPNF+  +D R FVS   G L+ +  E  D  N
Sbjct: 289 YEGVGTFLACQPPPHYPALSYRWLINEFPNFIRADDGRWFVSQVSGNLFLAKAEPNDTAN 348

Query: 366 YSC--NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLEC 421
           Y C   +   +S         PL V P++N +  K        FP    A  G  V LEC
Sbjct: 349 YFCFTTINLDISTKSTFSKPIPLSVLPNANPR--KSAPTIKVRFPAETYALTGHTVTLEC 406

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
            A+G PVP   W +    +P           L +P++  +D+G Y C A N         
Sbjct: 407 FAYGNPVPKLRWRKVDGLMPSKTGSSAEGPTLILPDLSFDDEGVYECEAYNSEGRDTHQG 466

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            IS+QA+P++   ++D  ++  ++L W+C + G P  +  W RNG+       P+  QDR
Sbjct: 467 RISVQAQPDWVQVMSDSEVEISSELLWSCLSSGKPRPSVRWLRNGQ-------PVITQDR 519

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +    L I  L  + D  MYQC A+N+  T Y+SA+LRV    P F+  P+     A 
Sbjct: 520 VEVNGANLKISSLALD-DSGMYQCVAENKHGTIYASAELRVQVQAPDFRLNPVRRLIPAA 578

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 661
            GG V I C P AAPKP   W +   ++ +  R  +  +G L I  VSR D G Y+C A 
Sbjct: 579 RGGQVMIECRPRAAPKPILFWSRGTELLANSSRITVAPDGTLWIRNVSRADEGKYTCFAE 638

Query: 662 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 721
           N  G   S G L V    +     P    I    N+ L+C A  +  +D+ + W   GV 
Sbjct: 639 NYLGKANSTGHLSVRDA-TKITLAPSNADINQGENVTLQCHASHDPTMDLTFTWALKGVL 697

Query: 722 IGNMDLNELETPNINIDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
              +DL +       I G    G L I NA  + AG + C  ++ V   S    ++V  P
Sbjct: 698 ---LDLEDPAGRYFRIQGQENIGDLLIVNAQLSQAGIFTCTAQTVVDSASASARLVVRAP 754

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG PGG+ V  V  TS  + W+ G  N  PI  Y I+ +++ +S W  +       E   
Sbjct: 755 PGPPGGILVKMVTDTSVELWWSHGHDNHSPIGKYIIMGQSSLSSEWKKMR-----TEPAN 809

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G  E++    L+ W  Y F+VIA N LG GEPS PS +  T    P  APS +GGGGG
Sbjct: 810 IEGNAESARVIGLMAWMDYRFQVIASNILGKGEPSQPSARIRTQPAAPTVAPSGLGGGGG 869

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              +L ++W P+ RE QN     Y + +R+K  T   SE    +      V    S   Y
Sbjct: 870 DHHELIVTWTPMAREYQNGDGFGYILAFRRKG-TAAWSEVRIPHVESSRHVYYNQSLAPY 928

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           T +EVK+QA N  G GP S+ 
Sbjct: 929 TPFEVKIQAYNRKGVGPFSQT 949



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 139/594 (23%), Positives = 225/594 (37%), Gaps = 78/594 (13%)

Query: 421  CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            C++ G P PS  W R G P+      E     L I ++ ++D G Y C A N    + +S
Sbjct: 495  CLSSGKPRPSVRWLRNGQPVITQDRVEVNGANLKISSLALDDSGMYQCVAENKHGTIYAS 554

Query: 481  VTISIQAE-PNFTIPLTDKHM--DNQADLTWTCEAFGVPDVTYSWFRNGELL-NSETLPL 536
              + +Q + P+F +    + +       +   C     P     W R  ELL NS  + +
Sbjct: 555  AELRVQVQAPDFRLNPVRRLIPAARGGQVMIECRPRAAPKPILFWSRGTELLANSSRITV 614

Query: 537  EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLKPSFKK 591
                     D  L IR ++   D   Y C A+N L    S+  L V     +TL PS   
Sbjct: 615  AP-------DGTLWIRNVS-RADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPS--- 663

Query: 592  RPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNII------GSGGRRKIFEN-GN 642
                      +G NVT+ C+    P     F W   G ++      G   R +  EN G+
Sbjct: 664  -----NADINQGENVTLQCHASHDPTMDLTFTWALKGVLLDLEDPAGRYFRIQGQENIGD 718

Query: 643  LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK---ITIAAHRNLQL 699
            LLI       +GI++CTA  V     +  RL+V   P      PP    + +    +++L
Sbjct: 719  LLIVNAQLSQAGIFTCTAQTVVDSASASARLVVRAPPG-----PPGGILVKMVTDTSVEL 773

Query: 700  RCS-AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--------GLLEITNASFA 750
              S  H        YI    G    + +  ++ T   NI+G        GL+   +  F 
Sbjct: 774  WWSHGHDNHSPIGKYIIM--GQSSLSSEWKKMRTEPANIEGNAESARVIGLMAWMDYRF- 830

Query: 751  DAGEYECVVKSTVGK-----ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA--- 802
                 + +  + +GK      S +       P   P G+           + WT  A   
Sbjct: 831  -----QVIASNILGKGEPSQPSARIRTQPAAPTVAPSGLGGGGGDHHELIVTWTPMAREY 885

Query: 803  TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
             NG     Y +  R    + W  V        +      +       L P++ +E K+ A
Sbjct: 886  QNGDGFG-YILAFRRKGTAAWSEV-------RIPHVESSRHVYYNQSLAPYTPFEVKIQA 937

Query: 863  GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
             N  G G P S + + ++  ++P   P+ I        ++ +SWEP+ +   N     Y+
Sbjct: 938  YNRKGVG-PFSQTVEVHSAEEEPTVGPASINATALSAFEIQVSWEPVQQLSANGILRGYE 996

Query: 923  IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            I + ++++ E  ++ ++  G    A  R+      T Y V V A N  G GP S
Sbjct: 997  IRYWRQHEREAAADRVRTAGLEPTA--RVSGLRPSTRYHVAVFAYNSAGTGPSS 1048


>gi|332815947|ref|XP_001137194.2| PREDICTED: contactin-6 isoform 1 [Pan troglodytes]
          Length = 956

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 243/737 (32%), Positives = 363/737 (49%), Gaps = 28/737 (3%)

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-N 308
            + L GG+L IN P   +D G Y C A+N  G+I+S   +L F +I +F  K    +   
Sbjct: 4   HYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVR 63

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
           +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GNY+
Sbjct: 64  EGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYT 123

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFG 425
           C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A G
Sbjct: 124 CFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALG 181

Query: 426 YPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R    +   + 
Sbjct: 182 NPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI 241

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E       +R  I
Sbjct: 242 FYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQI 294

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           ++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++ +++   GG
Sbjct: 295 ENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 353

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           ++ I C P   P+    WK+    +    R  + E+G+L I  ++R D+G Y+C ATN  
Sbjct: 354 DIVIGCKPNGFPRAAISWKRGTETLRQSKRVFLLEDGSLKIYNITRSDAGSYTCIATNQF 413

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W  NG  I  
Sbjct: 414 GTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI-- 470

Query: 725 MDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
            DL +       I G   G L I N     +G+Y C V++T+  +S    +IV GPPG P
Sbjct: 471 -DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPP 529

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             VQV ++  T++ + W  G  N  PI  + I  RT ++  W       +    +   G+
Sbjct: 530 EDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGK 584

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  I GGGG   +
Sbjct: 585 TYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSE 644

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+WE +P E QN     Y I +R    T +  E +    +    V R  S    + +E
Sbjct: 645 LVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFE 703

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G G  S V
Sbjct: 704 VKVGVYNNEGEGSLSTV 720



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 188/794 (23%), Positives = 293/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 82  SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 130

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 131 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 189

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 190 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 241

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 242 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 293

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 294 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGG 353

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+  G P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 354 DIVIGCKPNGFPRAAISWKRGTETLR------QSKRVFLLEDGSLKI-YNITRSDAGSYT 406

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 407 CIATNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 463

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G++I        FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 464 FFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVR 523

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 524 GPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 580

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 581 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGG 640

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 641 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTWSK--EKVSSVESSRFVYRN 693

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 694 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQSFSASEM 747

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 748 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 805

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 806 SVRAYNTAGTGPSS 819



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 112/299 (37%), Gaps = 46/299 (15%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI +++   C A G PNP Y W K     +RL     +P  ++R  +  G LII     V
Sbjct: 258 SIYDNLLWECKASGKPNPWYTWLKNG---ERL-----NP--EERIQIENGTLIITM-LNV 306

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNY 323
            D G Y C A NK+  I + +         +F+   +K+   +  Q  G  +    P  +
Sbjct: 307 SDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFV--QVGGDIVIGCKPNGF 364

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P     W R      + + KRVF+  DG+L    + + DAG+Y+C   ++       G  
Sbjct: 365 PRAAISWKRGT--ETLRQSKRVFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSL 422

Query: 384 F----PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRRG 437
                 +   P S                     G+ + L C     P     + W   G
Sbjct: 423 IVKERTVITVPPSKMDV---------------TVGESIVLPCQVSHDPSIEVVFVWFFNG 467

Query: 438 SPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
             +       +F RI       L I N+++   G+Y+C       +L +   I ++  P
Sbjct: 468 DVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPP 526



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 134/329 (40%), Gaps = 36/329 (10%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P P   W + D            PL  K    S    I+  P  Q ED
Sbjct: 171 SSVKLECFALGNPVPDISWRRLDG----------SPLPGK-VKYSKSQAILEIPNFQQED 219

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN---QNWGKAMFCDPPTNYPG 325
            G Y C ASN  G  +++  QL F    E+  K    I N     +   ++    +  P 
Sbjct: 220 EGFYECIASNLRGRNLAKG-QLIFYAPPEWEQK----IQNTYLSIYDNLLWECKASGKPN 274

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             Y W ++     +  ++R+ +  +G L  + L   D+G Y C  ++K      N     
Sbjct: 275 PWYTWLKN--GERLNPEERIQIE-NGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRV 331

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA- 444
           L   P  +   +K      K+F +    G  + + C   G+P  + +W +RG+   R + 
Sbjct: 332 LASAPDFSKSPVK-----KKSFVQ---VGGDIVIGCKPNGFPRAAISW-KRGTETLRQSK 382

Query: 445 -YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
             F   +  L I N+   D G Y C A+N     +++ ++ ++     T+P +   +   
Sbjct: 383 RVFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKERTVITVPPSKMDVTVG 442

Query: 504 ADLTWTCEAFGVP--DVTYSWFRNGELLN 530
             +   C+    P  +V + WF NG++++
Sbjct: 443 ESIVLPCQVSHDPSIEVVFVWFFNGDVID 471


>gi|26331270|dbj|BAC29365.1| unnamed protein product [Mus musculus]
          Length = 705

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 233/698 (33%), Positives = 348/698 (49%), Gaps = 34/698 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        ++    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KINGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P   + G  V+LEC A 
Sbjct: 193 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R        +
Sbjct: 251 GNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVVKGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  +DR  
Sbjct: 311 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLTRDRIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+   P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+P+P + W+K   I+    R  I E+GNL I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G +IV   P+     P  + +    ++ L C    +  LD+ + WT NG  I 
Sbjct: 483 FGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 542 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W       +    D   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             +    L PW  YEF+ +A N +G GEP  PS +  T
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPGRPSEKRRT 694


>gi|432092485|gb|ELK25100.1| Contactin-3 [Myotis davidii]
          Length = 1033

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 255/796 (32%), Positives = 373/796 (46%), Gaps = 64/796 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+ +P+D +  +        +T  C A G P+P Y W        +L  + I+   +
Sbjct: 98  GPVFVSEPSDSMVPVGAED--KRVTFKCEARGNPSPQYRW--------QLNGSDINLAVE 147

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+ L+GG+L++ +P +  D GSY C A+N  G+I+S   +L F ++  F  +    +  
Sbjct: 148 SRYELNGGDLVVINPHRDRDSGSYQCFATNPLGTIVSREAKLQFAYLENFKTRMRSAVSV 207

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P+FVEED R F+S + G LY + +E  D GNY
Sbjct: 208 REGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDGRRFISQETGHLYVAKVEPSDVGNY 267

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V S V+     G   PL +       +   K    FP+T P A   G  VRLEC A 
Sbjct: 268 TCVVTSVVTAARVLGSPTPLMLRADGVMGEYEPKIEVQFPETLPAA--KGSTVRLECFAL 325

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP   W R  G P PR      F  +L IP  + ED G Y C A N R    +   +
Sbjct: 326 GNPVPRITWRRSDGRPFPRKINVRKFGGVLEIPGFEQEDAGSYECLAENSRGRNVARGRL 385

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+P++   + D     +  L W C A G P  +Y W RNGE L  E       +R  
Sbjct: 386 TYYAKPHWVQLIGDVEAAVEESLRWDCRAGGKPKPSYRWLRNGEALALE-------ERIQ 438

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           +++  L+I  L+   D  M+QC A+N+    YSSA+LRVL   P F   P+     A  G
Sbjct: 439 LENGALSIVNLS-VADAGMFQCVAENKHGLAYSSAELRVLASAPDFSATPMRKLVRAQVG 497

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
             V + C P AAP+    WK+    +   GR    + G L I+ V++ D+G Y+C A N 
Sbjct: 498 SVVGLDCRPRAAPRAVCSWKRGEVTVREDGRISFLKEGGLSIANVTKADAGTYTCFAENQ 557

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G      RL+V   P+     P  + ++   ++ L C    + LLDVA+ W  NG    
Sbjct: 558 FGTANDSTRLVVTD-PTRITLAPSNMDVSVGESVVLPCQVRHDPLLDVAFTWYFNGALAD 616

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
              D + LE    +  G L+ I N      G+Y CVV+S V  +S+   ++V G PG PG
Sbjct: 617 FQKDGSHLEKVGGSSSGDLM-IRNIQLKHGGKYVCVVQSAVDSVSSAADLVVRGSPGPPG 675

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            VQV E+  T+A + WT+G  N  PIT Y + ART ++  W   +   + + +D   G  
Sbjct: 676 NVQVEEITDTTAQVSWTEGTDNHSPITSYSVQARTPFSVGW--QAARTVPEVID---GNT 730

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+V+A N LG GEPS PS +                         
Sbjct: 731 HTATVVELNPWVEYEFRVVASNRLGGGEPSLPSEK------------------------- 765

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
                P+P E QN     Y + +R    T +  +T+    +    V R  S   +  Y+V
Sbjct: 766 -----PVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDAPRYVFRNESIVPFAPYQV 819

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G GP S V
Sbjct: 820 KVGVYNNKGEGPFSPV 835



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 154/658 (23%), Positives = 237/658 (36%), Gaps = 105/658 (15%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     EQ DAG+Y C  ++     GRN     L  +   ++ QL    +      
Sbjct: 351 FGGVLEIPGFEQEDAGSYECLAEN---SRGRNVARGRLTYYAKPHWVQLI--GDVEAAVE 405

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
           E+      +R +C A G P PSY W R G  L      +  N  L+I N+ V D G + C
Sbjct: 406 ES------LRWDCRAGGKPKPSYRWLRNGEALALEERIQLENGALSIVNLSVADAGMFQC 459

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N      SS  + + A  P+F+     K +  Q    +   C     P    SW R 
Sbjct: 460 VAENKHGLAYSSAELRVLASAPDFSATPMRKLVRAQVGSVVGLDCRPRAAPRAVCSWKRG 519

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
                 E    ED    F+++  L+I  +  + D   Y C A+NQ  T   S +L V+T 
Sbjct: 520 ------EVTVREDGRISFLKEGGLSIANVT-KADAGTYTCFAENQFGTANDSTRL-VVTD 571

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C     P     F W         +KDG+ +   G 
Sbjct: 572 PTRITLAPSNMDVSVGE--SVVLPCQVRHDPLLDVAFTWYFNGALADFQKDGSHLEKVGG 629

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +     G Y C   +      S   L+V   P      PP       
Sbjct: 630 SS---SGDLMIRNIQLKHGGKYVCVVQSAVDSVSSAADLVVRGSPG-----PPG------ 675

Query: 695 RNLQLRCSAHTEELLDVA--YIWTH---NGVRIGNMDLNELETPNIN----------IDG 739
            N+Q+      EE+ D      WT    N   I +  +      ++           IDG
Sbjct: 676 -NVQV------EEITDTTAQVSWTEGTDNHSPITSYSVQARTPFSVGWQAARTVPEVIDG 728

Query: 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
                T        EYE  V          +  +  G P LP    V E  +      + 
Sbjct: 729 NTHTATVVELNPWVEYEFRV--------VASNRLGGGEPSLPSEKPVPEELQNGEGFGY- 779

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
                   +  ++ +  T W  T       V   +  RY  R E+     +VP++ Y+ K
Sbjct: 780 --------VVAFRPLGVTTWIQTV------VTSPDAPRYVFRNES-----IVPFAPYQVK 820

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  AP+ +        ++ +SW  +P +  +   +
Sbjct: 821 VGVYNNKGEG-PFSPVATVLSAEEEPTAAPAHVWAHSLSSSEIEVSWSAIPWKLSSGHLL 879

Query: 920 YYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            Y++ +W   +  E     +K     G  V R+     +  Y   V+A N  G GP S
Sbjct: 880 GYEVRYW--TSGEEGSPRRVKVV--AGETVARLHGLKSHLVYHAAVRAYNSAGAGPFS 933


>gi|354478087|ref|XP_003501247.1| PREDICTED: contactin-2 [Cricetulus griseus]
          Length = 1040

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 280/803 (34%), Positives = 392/803 (48%), Gaps = 53/803 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S  + +TL+C A   P  +Y W        ++    ++    
Sbjct: 38  GPVFEDQPVGLLF--PEESTEDQVTLACRARASPPATYRW--------KMNGTDMNLEPG 87

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I  P + +D G Y C ASN  G+++S+   L FGF+ EF+ + R P   
Sbjct: 88  SRHQLMGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKT 147

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 148 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 207

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 208 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQ 258

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 259 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 315

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P     W RNGE       P
Sbjct: 316 RDTVQGRIVVQAQPEWLKVISDTEADIGSNLRWACAAAGKPRPMVRWLRNGE-------P 368

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F++ P+ 
Sbjct: 369 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVR 427

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG ++I C P AAPK   +W K   I+G+  R  +  +G L+I  +SR D G 
Sbjct: 428 RLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGK 487

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + W
Sbjct: 488 YTCFAENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 546

Query: 716 THNGVRIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           T +   I N D         ++    G L I NA     G+Y C+ ++ V   S + TV+
Sbjct: 547 TLDDFPI-NFDKPGGHYRRASVKETIGDLTILNAQLRHGGKYMCMAQTVVDGASKEATVL 605

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART  +  W  V  + +  
Sbjct: 606 VRGPPGPPGGVVVRDIGDTTVQVSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNI 665

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           E     G  E +    L+PW  YEF+V A N LG GEPS PS +  T    P  APS + 
Sbjct: 666 E-----GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLS 720

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG  G+L I+W P+ RE QN     Y + +R++  + +Q+  +    +    V    S
Sbjct: 721 GGGGAPGELIINWTPMSREYQNGDGFGYLLSFRRQGSSVWQTARVPG-ADAQYFVYSNDS 779

Query: 954 EFYYTEYEVKVQAINDVGPGPES 976
              YT +EVK+++ N  G GPES
Sbjct: 780 IHPYTPFEVKIRSYNRRGDGPES 802



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +L++SWE + +
Sbjct: 782 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWESV-Q 839

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+   +  T+Y V V+A N  G
Sbjct: 840 QDTNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSA--RVTGLYPNTKYHVTVRAYNRAG 897

Query: 972 PGPES 976
            GP S
Sbjct: 898 TGPAS 902


>gi|149058636|gb|EDM09793.1| contactin 2 [Rattus norvegicus]
          Length = 1040

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 280/809 (34%), Positives = 392/809 (48%), Gaps = 65/809 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP  ++F   + S  + +TL+C A   P  +Y W        ++    ++    
Sbjct: 38  GPIFEEQPIGLLF--PEESAEDQVTLACRARASPPATYRW--------KMNGTDMNLEPG 87

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I  P + +D G Y C ASN  G+++S+   L FGF+ EF+ + R P   
Sbjct: 88  SRHQLMGGNLVIMSPTKTQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKT 147

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 148 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 207

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 208 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQ 258

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 259 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 315

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P     W RNGE       P
Sbjct: 316 RDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE-------P 368

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F++ P+ 
Sbjct: 369 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVR 427

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG ++I C P AAPK   +W K   I+G+  R  +  +G L+I  +SR D G 
Sbjct: 428 RLIPAARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGK 487

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + W
Sbjct: 488 YTCFAENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 546

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +         +     G L I NA     G+Y C+ ++ V   S + TV+V
Sbjct: 547 TLDDFPIDFDKPGGHYRRASAKETIGDLTILNAQLRHGGKYTCMAQTVVDGTSKEATVLV 606

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART  +  W  V  + +  E
Sbjct: 607 RGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE 666

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L+PW  YEF+V A N LG GEPS PS +  T    P  APS + G
Sbjct: 667 -----GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSG 721

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE-------YGNVGIA 947
           GGG  G+L I+W P+ RE QN     Y + +R++  + +Q+  +         YGN  I 
Sbjct: 722 GGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGNDSIQ 781

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPES 976
                    YT +EVK+++ N  G GPES
Sbjct: 782 P--------YTPFEVKIRSYNRRGDGPES 802



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    ++++SWEP+  
Sbjct: 782 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEPV-L 839

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 840 QDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSA--RVTGLNPNTKYHVTVRAYNRAG 897

Query: 972 PGPES 976
            GP S
Sbjct: 898 TGPAS 902


>gi|345786238|ref|XP_003432801.1| PREDICTED: contactin-6 [Canis lupus familiaris]
          Length = 956

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 245/736 (33%), Positives = 365/736 (49%), Gaps = 28/736 (3%)

Query: 251 FTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQ 309
           + L GGNL I+ PR  +D G Y C A+N  G+I+S   +L F +I +F  K    +   +
Sbjct: 5   YRLDGGNLAISSPRTDQDIGIYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSMVSVRE 64

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSC 368
             G  + C PP ++  ++Y W  +  P +V+EDKR FVS + G LY + +E  D GNY+C
Sbjct: 65  GQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNYTC 124

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFGY 426
            + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A G 
Sbjct: 125 FITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN 182

Query: 427 PVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485
           PVP  +W R  G+PLP    +     IL IPN + ED+G Y C A N R    +   +  
Sbjct: 183 PVPDISWRRLDGNPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIF 242

Query: 486 QAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ 545
            A P +   + + ++     L W C A G P+  Y+W +NGE LN E       +R  I+
Sbjct: 243 YAPPEWEQKIQNTYLSIYDSLFWECRASGKPNPWYTWLKNGERLNPE-------ERIQIE 295

Query: 546 DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN 605
           +  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++  +    GG+
Sbjct: 296 NGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGD 354

Query: 606 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 665
           +TI C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y+C ATN  G
Sbjct: 355 ITIECKPNAFPRAVISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATNQFG 414

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 725
           + ++ G L+V    +     P K+ +    ++ L C    +  ++V +IW+ NG  I   
Sbjct: 415 VAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI--- 470

Query: 726 DLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
           DL +  T    I G   G L I N     +G+Y C VK+T+  +S    +IV GPPG P 
Sbjct: 471 DLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPE 530

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V+V  +  T++ + W  G+ N  PI  + + ART ++  W       +    +   G+ 
Sbjct: 531 DVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILNGKT 585

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L PW  YEF+V+AGN +G GEPS  S    T A  P  AP+ I GGGG   +L
Sbjct: 586 YNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSEL 645

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WE +P E QN     Y I  R    T +  + +    +    V R  S    + +EV
Sbjct: 646 VITWESIPEELQNGEEFGYIIMLRPVGSTSWTKKRVPSVESSRF-VYRNESITPLSPFEV 704

Query: 963 KVQAINDVGPGPESEV 978
           KV   N+ G G  S V
Sbjct: 705 KVGVYNNEGEGSLSTV 720



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 184/795 (23%), Positives = 290/795 (36%), Gaps = 100/795 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNK 279
           SY W   D   YVQ+           DKR  +S   GNL I    +  D G+Y C  +NK
Sbjct: 82  SYAWTFNDNPLYVQE-----------DKRRFVSQETGNLYIAK-VEPSDVGNYTCFITNK 129

Query: 280 FGSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYY 329
                 +      VQ   G +GE+  K   R PE     ++    + C    N P  +  
Sbjct: 130 EAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDIS 188

Query: 330 WAR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
           W R   +  P  V+  K         L     +Q D G Y C   +     GRN     L
Sbjct: 189 WRRLDGNPLPGKVKYSKS-----QAILEIPNFQQEDEGFYECIAGNL---RGRNLAKGQL 240

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
             +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      
Sbjct: 241 IFYAPPEWEQ-KIQNTYLSIY-------DSLFWECRASGKPNPWYTWLKNGERLNPEERI 292

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ-- 503
           +  N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q  
Sbjct: 293 QIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVG 352

Query: 504 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
            D+T  C+    P    SW R  E        L    R F+ ++     Y     D   Y
Sbjct: 353 GDITIECKPNAFPRAVISWKRGME-------SLRQSKRVFLSEDGSLKIYNVTRSDAGSY 405

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 621
            C A NQ     ++  L V+  +      P + +   GE  ++ + C     P  +  F+
Sbjct: 406 TCIATNQFGVAKNTGSL-VVKERTVITIPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFI 462

Query: 622 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           W  +G++I        FE       G+L+I  +  + SG Y CT         +   +IV
Sbjct: 463 WSFNGDVIDLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIV 522

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735
              P   E +  +   +    L  R  +     + +  +       +G   ++ +  P I
Sbjct: 523 RGPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTV--PEI 580

Query: 736 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 784
            ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG 
Sbjct: 581 -LNGKTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGG 639

Query: 785 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
                 ++   I W    +   NG     Y I+ R   +++W    + V   E  R+  R
Sbjct: 640 G----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTSW--TKKRVPSVESSRFVYR 692

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            E+     + P S +E KV   N  G G  S+ S  Y+   D+P  AP           +
Sbjct: 693 NES-----ITPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQLAPGGTSVQSFSASE 746

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           + +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y 
Sbjct: 747 MEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYF 804

Query: 962 VKVQAINDVGPGPES 976
             V+A N  G GP S
Sbjct: 805 ASVRAYNSAGAGPSS 819



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 122/318 (38%), Gaps = 45/318 (14%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI + +   C A G PNP Y W K     +RL     +P  ++R  +  G LII     V
Sbjct: 258 SIYDSLFWECRASGKPNPWYTWLKNG---ERL-----NP--EERIQIENGTLIITM-LNV 306

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNY 323
            D G Y C A NK+  I + +         +F+   +K+   +  Q  G       P  +
Sbjct: 307 SDSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVV--QVGGDITIECKPNAF 364

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P     W R      + + KRVF+S DG+L    + + DAG+Y+C   ++       G  
Sbjct: 365 PRAVISWKRGM--ESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATNQFGVAKNTG-- 420

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAP---KAGDKVRLECVAFGYPVPS--YNWTRRGS 438
                        L        T P +      G+ + L C     P     + W+  G 
Sbjct: 421 ------------SLVVKERTVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGD 468

Query: 439 PLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 491
            +       +F RI       L I N+++   G+Y+C       +L +   I ++  P  
Sbjct: 469 VIDLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGP 528

Query: 492 TIPLTDKHMDN-QADLTW 508
              +  +H+ +  + L+W
Sbjct: 529 PEDVRVEHISSTTSQLSW 546



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 130/328 (39%), Gaps = 34/328 (10%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P P   W + D           +PL  K    S    I+  P  Q ED
Sbjct: 171 SSVKLECFALGNPVPDISWRRLDG----------NPLPGK-VKYSKSQAILEIPNFQQED 219

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWG--KAMFCD-PPTNYPG 325
            G Y C A N  G  +++  QL F    E+  K    I N       ++F +   +  P 
Sbjct: 220 EGFYECIAGNLRGRNLAKG-QLIFYAPPEWEQK----IQNTYLSIYDSLFWECRASGKPN 274

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             Y W ++     +  ++R+ +  +G L  + L   D+G Y C  ++K      N     
Sbjct: 275 PWYTWLKN--GERLNPEERIQIE-NGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRV 331

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA- 444
           L   P  +F +     N         + G  + +EC    +P    +W R    L ++  
Sbjct: 332 LASAP--DFSKNPIKKN------SVVQVGGDITIECKPNAFPRAVISWKRGMESLRQSKR 383

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
            F + +  L I NV   D G Y C A+N     +++ ++ ++     TIP +   +    
Sbjct: 384 VFLSEDGSLKIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVKERTVITIPPSKMDVTVGE 443

Query: 505 DLTWTCEAFGVP--DVTYSWFRNGELLN 530
            +   C+    P  +V + W  NG++++
Sbjct: 444 SIVLPCQVSHDPSIEVVFIWSFNGDVID 471


>gi|348578147|ref|XP_003474845.1| PREDICTED: contactin-2-like [Cavia porcellus]
          Length = 1041

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 284/803 (35%), Positives = 392/803 (48%), Gaps = 53/803 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S    +TL+C A   P  +Y W K +  + +L     +P  D
Sbjct: 37  GPVFEDQPLGLLF--PEESTEEQVTLACRARASPPATYRW-KMNGTEMKL-----EP--D 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  SRHQLVGGNLVIINPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKA 146

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 147 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 206

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 207 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPAETYALVGQQ 257

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 258 VTLECFAFGNPVPMIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 314

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  A+L W C A G P  T  W RNGE       P
Sbjct: 315 RDTVQGRIIVQAQPEWLKVISDTEADIGANLRWGCAAAGKPRPTVRWLRNGE-------P 367

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F++ P+ 
Sbjct: 368 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVR 426

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG ++I C P AAPK   +W K   I+ +  R  +   G L+I  +SR D G 
Sbjct: 427 RLIPAARGGEISIACQPRAAPKATVLWSKGTEILVNSSRVTVTPGGTLIIRNISRSDEGK 486

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + W
Sbjct: 487 YTCFAENFMGKANSTGVLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTW 545

Query: 716 THNGVRIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           T +   I N D         ++    G L I NA     G+Y C+ ++ V   S + TV+
Sbjct: 546 TLDDFPI-NFDKPGGHYRRASVKETVGDLMILNAQLRHGGKYTCMAQTVVDSASKEATVL 604

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    
Sbjct: 605 VRGPPGPPGGVVVRDISDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANI 664

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           E     G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + 
Sbjct: 665 E-----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSRIRTKEAVPSVAPSGLS 719

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG  G+L ++W P+ RE QN     Y + +R++  + +Q+  +    +    V    S
Sbjct: 720 GGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSSGWQTARVPG-ADAQYFVYSNES 778

Query: 954 EFYYTEYEVKVQAINDVGPGPES 976
              YT +EVK+++ N  G GPES
Sbjct: 779 IQPYTPFEVKIRSYNQRGDGPES 801



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N+ G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 781 PYTPFEVKIRSYNQRGDG-PESLTAIVYSAEEEPRVAPAKVWAKGVSSSEMNVTWEPV-Q 838

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G   +A V   S    T+Y V V+A N  G
Sbjct: 839 QDVNGILLGYEIRYWKAGDKEAAADRVRTAGLETVACVT--SLQPNTKYHVTVRAYNRAG 896

Query: 972 PGPES 976
            GP S
Sbjct: 897 TGPAS 901


>gi|297285390|ref|XP_002802773.1| PREDICTED: contactin-6 [Macaca mulatta]
          Length = 957

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 242/737 (32%), Positives = 363/737 (49%), Gaps = 28/737 (3%)

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-N 308
            + L GG+L I+ P   +D G Y C A+N  G+I+S   +L F +I +F  K    +   
Sbjct: 4   HYRLDGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVR 63

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
           +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E  D GNY+
Sbjct: 64  EGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYT 123

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFG 425
           C + +K +     GP  PL     ++    ++       FPE  +A     V+LEC A G
Sbjct: 124 CFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALG 181

Query: 426 YPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP  +W R  GSPLP    +     IL IPN + ED+G Y C ASN R    +   + 
Sbjct: 182 NPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI 241

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E       +R  I
Sbjct: 242 FYAPPEWEQKIQNTYLSIYDNLLWKCKASGKPNPWYTWLKNGERLNPE-------ERIQI 294

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           ++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++  ++   GG
Sbjct: 295 ENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGG 353

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           ++ I C P A P+    WK+    +    R  + E+G+L I  V+R D+G Y+C ATN  
Sbjct: 354 DIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATNQF 413

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G  ++ G LIV    +     P K+ +    ++ L C    +  ++V ++W  NG  I  
Sbjct: 414 GTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII-- 470

Query: 725 MDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
            DL +       I G   G L I N     +G+Y C V++T+  +S    +IV GPPG P
Sbjct: 471 -DLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPP 529

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T++ + W  G  N  PI  + I  +T ++  W       +    +   G+
Sbjct: 530 EDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGW-----QAVATVPEILNGK 584

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+AGN +G GEPS PS    T A  P  AP  + GGGG   +
Sbjct: 585 TYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSE 644

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+WE +P E QN     Y I +R    T +  E +    +    V R  S    + +E
Sbjct: 645 LVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSPFE 703

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G G  S V
Sbjct: 704 VKVGVYNNEGEGSLSTV 720



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 186/794 (23%), Positives = 293/794 (36%), Gaps = 98/794 (12%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 82  SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 130

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 131 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 189

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G Y C + S +   GRN     L 
Sbjct: 190 RRLDGSPLPGKVKYSKS-----QAILEIPNFQQEDEGFYEC-IASNLR--GRNLAKGQLI 241

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  +C A G P P Y W + G  L      +
Sbjct: 242 FYAPPEWEQ-KIQNTYLSIY-------DNLLWKCKASGKPNPWYTWLKNGERLNPEERIQ 293

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  L I  + V D G Y C A N    + ++  + + A  P+F+     K+   Q   
Sbjct: 294 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGG 353

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D+   C+    P    SW R  E L       + +  + ++D  L I Y     D   Y 
Sbjct: 354 DIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSYT 406

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ  T  ++  L ++  +      P + +   GE  ++ + C     P  +  FVW
Sbjct: 407 CIATNQFGTAKNAGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFVW 463

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +G+II        FE       G+L+I  +  + SG Y CT         +   +IV 
Sbjct: 464 FFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVR 523

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    L  R        + +  I T     +G   +  +  P I 
Sbjct: 524 GPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGWQAVATV--PEI- 580

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V    P  + GG  
Sbjct: 581 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGG 640

Query: 786 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
                ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R 
Sbjct: 641 ----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVASVESSRFVYRN 693

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
           E+     ++P S +E KV   N  G G  S+ +  Y+   D+P  AP           ++
Sbjct: 694 ES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFSASEM 747

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            +SW  +   +     + Y++ +   +  E     ++  GNV      I      T Y  
Sbjct: 748 EVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFA 805

Query: 963 KVQAINDVGPGPES 976
            V+A N  G GP S
Sbjct: 806 SVRAYNTAGTGPSS 819



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 115/300 (38%), Gaps = 48/300 (16%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI +++   C A G PNP Y W K     +RL     +P  ++R  +  G LII     V
Sbjct: 258 SIYDNLLWKCKASGKPNPWYTWLKNG---ERL-----NP--EERIQIENGTLIITM-LNV 306

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN---QNWGKAMFCDPPTNY 323
            D G Y C A NK+  I + +         +F+  ++P   N   Q  G  +    P  +
Sbjct: 307 SDSGVYQCAAENKYQIIYANAELRVLASAPDFS--KSPVKKNSFVQVGGDIVIECKPNAF 364

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P     W R      + + KR+F+  DG+L    + + DAG+Y+C + +    T +N   
Sbjct: 365 PRAAISWKRGT--ETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTC-IATNQFGTAKNAGS 421

Query: 384 FPLK-----VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRR 436
             +K       P S                     G+ + L C     P     + W   
Sbjct: 422 LIVKERTVITVPPSKMDV---------------TVGESIVLPCQVSHDPSIEVVFVWFFN 466

Query: 437 GSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
           G  +       +F RI       L I N+++   G+Y+C       +L +   I ++  P
Sbjct: 467 GDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPP 526



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 36/329 (10%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P P   W + D            PL  K    S    I+  P  Q ED
Sbjct: 171 SSVKLECFALGNPVPDISWRRLDG----------SPLPGK-VKYSKSQAILEIPNFQQED 219

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN---QNWGKAMFCDPPTNYPG 325
            G Y C ASN  G  +++  QL F    E+  K    I N     +   ++    +  P 
Sbjct: 220 EGFYECIASNLRGRNLAKG-QLIFYAPPEWEQK----IQNTYLSIYDNLLWKCKASGKPN 274

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             Y W ++     +  ++R+ +  +G L  + L   D+G Y C  ++K      N     
Sbjct: 275 PWYTWLKN--GERLNPEERIQIE-NGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRV 331

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA- 444
           L   P  +   +K  N+F        + G  + +EC    +P  + +W +RG+   R + 
Sbjct: 332 LASAPDFSKSPVK-KNSF-------VQVGGDIVIECKPNAFPRAAISW-KRGTETLRQSK 382

Query: 445 -YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
             F   +  L I NV   D G Y C A+N     +++ ++ ++     T+P +   +   
Sbjct: 383 RMFLLEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVKERTVITVPPSKMDVTVG 442

Query: 504 ADLTWTCEAFGVP--DVTYSWFRNGELLN 530
             +   C+    P  +V + WF NG++++
Sbjct: 443 ESIVLPCQVSHDPSIEVVFVWFFNGDIID 471


>gi|74188525|dbj|BAE28018.1| unnamed protein product [Mus musculus]
          Length = 1040

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 277/802 (34%), Positives = 391/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP  ++F   + S  + +TL+C A   P  +Y W        ++    ++    
Sbjct: 38  GPVFEEQPVGLLF--PEESAEDQVTLACRARASPPATYRW--------KMNGTEMNLEPG 87

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I  P + +D G Y C ASN  G+++S+   L FGF+ EF+ + R P   
Sbjct: 88  SRHQLMGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKT 147

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 148 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 207

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 208 SCLATSHLD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQ 258

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+    E     L IP+V  ED+G Y C A N + 
Sbjct: 259 VTLECFAFGNPVPRIKWRKVDGSLSPQWGTAEP---TLQIPSVSFEDEGTYECEAENSKG 315

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P     W RNGE       P
Sbjct: 316 RDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE-------P 368

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    LN E D  MYQC A+N+  T Y+SA+L V  L P F++ P+ 
Sbjct: 369 LASQNRVEVLAGDLRFSKLNLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVR 427

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG ++I C P AAPK   +W K   I+G+  R  +  +G L+I  +SR D G 
Sbjct: 428 RLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGK 487

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + W
Sbjct: 488 YTCFAENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 546

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   +  +         ++    G L I NA     G Y C+ ++ V   S + TV+V
Sbjct: 547 TLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLV 606

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART  +  W  V  + +  E
Sbjct: 607 RGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE 666

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L+PW  YEF+V A N LG GEPS PS +  T    P  APS + G
Sbjct: 667 -----GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSG 721

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L+I+W P+ RE QN     Y + +R++  + +Q+  +    +    V    S 
Sbjct: 722 GGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSI 780

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK+++ N  G GPES
Sbjct: 781 HPYTPFEVKIRSYNRRGDGPES 802



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 182/802 (22%), Positives = 298/802 (37%), Gaps = 108/802 (13%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY W   ++       N I P   + F + + GNL I       D G+Y C A+  
Sbjct: 163 YPGLSYRWLLNEF------PNFI-PTDGRHFVSQTTGNLYIAR-TNASDLGNYSCLAT-- 212

Query: 280 FGSIISESVQLAFGFIGEFNLKR------APEIGNQNWGKAMFCDPPTNYPGVNYYWARD 333
             S +  S +  F    + NL        AP I      KA F  PP  Y  V      +
Sbjct: 213 --SHLDFSTKSVFSKFAQLNLAAEDPRLFAPSI------KARF--PPETYALVGQQVTLE 262

Query: 334 YFPNFVEEDKRVFVSYDGAL-----------YFSALEQIDAGNYSCNVQ-SKVSDTGRNG 381
            F       +  +   DG+L              ++   D G Y C  + SK  DT +  
Sbjct: 263 CFAFGNPVPRIKWRKVDGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQG- 321

Query: 382 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
                ++   +  + LK  ++           G  +R  C A G P P   W R G PL 
Sbjct: 322 -----RIIVQAQPEWLKVISDTEADI------GSNLRWGCAAAGKPRPMVRWLRNGEPLA 370

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKHM 500
                E     L    + +ED G Y C A N    + +S  +++QA  P+F      + +
Sbjct: 371 SQNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLI 430

Query: 501 --DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPE 557
                 +++  C+    P  T  W +  E+L + T       R  +  D  L IR ++  
Sbjct: 431 PAARGGEISIPCQPRAAPKATILWSKGTEILGNST-------RVTVTLDGTLIIRNIS-R 482

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 617
            D   Y C A+N +    S+    +L+++ + K     S      G N+T+ C+    P 
Sbjct: 483 SDEGKYTCFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPT 539

Query: 618 P--KFVWKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDE 668
               F W  D   +     G   RR   +   G+L I        G Y+C A  V  +D 
Sbjct: 540 MDLTFTWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTV--VDG 597

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
           +     VL            +       +QL  S   +    +A  +T       +    
Sbjct: 598 ASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWK 656

Query: 729 ELETPNINIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGP 777
           ++ T  +NI+G              +YE  V ++             +I TK  V    P
Sbjct: 657 QVRTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAV----P 712

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
              P G+          TI WT  +    NG     Y +  R   +S+W   +  V G +
Sbjct: 713 SVAPSGLSGGGGAPGELTINWTPMSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGAD 769

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
              +    ++     + P++ +E K+ + N  G G P S +    +  ++P  AP+++  
Sbjct: 770 TQYFVYSNDS-----IHPYTPFEVKIRSYNRRGDG-PESLTAIVYSAEEEPKVAPAKVWA 823

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
            G    ++++SWEP+  +  N   + Y+I + K  D E  ++ ++  G    A  R+   
Sbjct: 824 KGSSSSEMNVSWEPV-LQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSA--RVTGL 880

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
           +  T+Y V V+A N  G GP S
Sbjct: 881 YPNTKYHVTVRAYNRAGTGPAS 902


>gi|54607084|ref|NP_796103.2| contactin-2 precursor [Mus musculus]
 gi|51704323|sp|Q61330.2|CNTN2_MOUSE RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
           AltName: Full=Axonin-1; AltName: Full=Transient axonal
           glycoprotein 1; Short=TAX-1; Flags: Precursor
 gi|41946117|gb|AAH66106.1| Contactin 2 [Mus musculus]
 gi|148707726|gb|EDL39673.1| mCG12584 [Mus musculus]
          Length = 1040

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 277/802 (34%), Positives = 391/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP  ++F   + S  + +TL+C A   P  +Y W        ++    ++    
Sbjct: 38  GPVFEEQPVGLLF--PEESAEDQVTLACRARASPPATYRW--------KMNGTEMNLEPG 87

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I  P + +D G Y C ASN  G+++S+   L FGF+ EF+ + R P   
Sbjct: 88  SRHQLMGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKT 147

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 148 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 207

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 208 SCLATSHLD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQ 258

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+    E     L IP+V  ED+G Y C A N + 
Sbjct: 259 VTLECFAFGNPVPRIKWRKVDGSLSPQWGTAEP---TLQIPSVSFEDEGTYECEAENSKG 315

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P     W RNGE       P
Sbjct: 316 RDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE-------P 368

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    LN E D  MYQC A+N+  T Y+SA+L V  L P F++ P+ 
Sbjct: 369 LASQNRVEVLAGDLRFSKLNLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVR 427

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG ++I C P AAPK   +W K   I+G+  R  +  +G L+I  +SR D G 
Sbjct: 428 RLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGK 487

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + W
Sbjct: 488 YTCFAENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 546

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   +  +         ++    G L I NA     G Y C+ ++ V   S + TV+V
Sbjct: 547 TLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLV 606

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART  +  W  V  + +  E
Sbjct: 607 RGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE 666

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L+PW  YEF+V A N LG GEPS PS +  T    P  APS + G
Sbjct: 667 -----GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSG 721

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L+I+W P+ RE QN     Y + +R++  + +Q+  +    +    V    S 
Sbjct: 722 GGGAPGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSI 780

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK+++ N  G GPES
Sbjct: 781 HPYTPFEVKIRSYNRRGDGPES 802



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 182/802 (22%), Positives = 298/802 (37%), Gaps = 108/802 (13%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY W   ++       N I P   + F + + GNL I       D G+Y C A+  
Sbjct: 163 YPGLSYRWLLNEF------PNFI-PTDGRHFVSQTTGNLYIAR-TNASDLGNYSCLAT-- 212

Query: 280 FGSIISESVQLAFGFIGEFNLKR------APEIGNQNWGKAMFCDPPTNYPGVNYYWARD 333
             S +  S +  F    + NL        AP I      KA F  PP  Y  V      +
Sbjct: 213 --SHLDFSTKSVFSKFAQLNLAAEDPRLFAPSI------KARF--PPETYALVGQQVTLE 262

Query: 334 YFPNFVEEDKRVFVSYDGAL-----------YFSALEQIDAGNYSCNVQ-SKVSDTGRNG 381
            F       +  +   DG+L              ++   D G Y C  + SK  DT +  
Sbjct: 263 CFAFGNPVPRIKWRKVDGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQG- 321

Query: 382 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
                ++   +  + LK  ++           G  +R  C A G P P   W R G PL 
Sbjct: 322 -----RIIVQAQPEWLKVISDTEADI------GSNLRWGCAAAGKPRPMVRWLRNGEPLA 370

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKHM 500
                E     L    + +ED G Y C A N    + +S  +++QA  P+F      + +
Sbjct: 371 SQNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLI 430

Query: 501 --DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPE 557
                 +++  C+    P  T  W +  E+L + T       R  +  D  L IR ++  
Sbjct: 431 PAARGGEISIPCQPRAAPKATILWSKGTEILGNST-------RVTVTLDGTLIIRNIS-R 482

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 617
            D   Y C A+N +    S+    +L+++ + K     S      G N+T+ C+    P 
Sbjct: 483 SDEGKYTCFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPT 539

Query: 618 P--KFVWKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDE 668
               F W  D   +     G   RR   +   G+L I        G Y+C A  V  +D 
Sbjct: 540 MDLTFTWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTV--VDG 597

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
           +     VL            +       +QL  S   +    +A  +T       +    
Sbjct: 598 ASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWK 656

Query: 729 ELETPNINIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGP 777
           ++ T  +NI+G              +YE  V ++             +I TK  V    P
Sbjct: 657 QVRTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAV----P 712

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
              P G+          TI WT  +    NG     Y +  R   +S+W   +  V G +
Sbjct: 713 SVAPSGLSGGGGAPGELTINWTPMSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGAD 769

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
              +    ++     + P++ +E K+ + N  G G P S +    +  ++P  AP+++  
Sbjct: 770 TQYFVYSNDS-----IHPYTPFEVKIRSYNRRGDG-PESLTAIVYSAEEEPKVAPAKVWA 823

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
            G    ++++SWEP+  +  N   + Y+I + K  D E  ++ ++  G    A  R+   
Sbjct: 824 KGSSSSEMNVSWEPV-LQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSA--RVTGL 880

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
           +  T+Y V V+A N  G GP S
Sbjct: 881 YPNTKYHVTVRAYNRAGTGPAS 902


>gi|6981632|ref|NP_037016.1| contactin-2 precursor [Rattus norvegicus]
 gi|114736|sp|P22063.1|CNTN2_RAT RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
           AltName: Full=Axonin-1; AltName: Full=Transient axonal
           glycoprotein 1; Short=TAX-1; Flags: Precursor
 gi|207149|gb|AAA42201.1| axonal glycoprotein (TAG-1) precursor [Rattus norvegicus]
          Length = 1040

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 280/809 (34%), Positives = 392/809 (48%), Gaps = 65/809 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP  ++F   + S  + +TL+C A   P  +Y W        ++    ++    
Sbjct: 38  GPIFEEQPIGLLF--PEESAEDQVTLACRARASPPATYRW--------KMNGTDMNLEPG 87

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I  P + +D G Y C ASN  G+++S+   L FGF+ EF+ + R P   
Sbjct: 88  SRHQLMGGNLVIMSPTKTQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKT 147

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 148 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 207

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 208 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQ 258

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 259 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 315

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P     W RNGE       P
Sbjct: 316 RDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE-------P 368

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F++ P+ 
Sbjct: 369 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVR 427

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG ++I C P AAPK   +W K   I+G+  R  +  +G L+I  +SR D G 
Sbjct: 428 RLIPAARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGK 487

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + W
Sbjct: 488 YTCFAENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 546

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +         +     G L I NA     G+Y C+ ++ V   S + TV+V
Sbjct: 547 TLDDFPIDFDKPGGHYRRASAKETIGDLTILNAHVRHGGKYTCMAQTVVDGTSKEATVLV 606

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART  +  W  V  + +  E
Sbjct: 607 RGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE 666

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L+PW  YEF+V A N LG GEPS PS +  T    P  APS + G
Sbjct: 667 -----GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSG 721

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE-------YGNVGIA 947
           GGG  G+L I+W P+ RE QN     Y + +R++  + +Q+  +         YGN  I 
Sbjct: 722 GGGAPGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGNDSIQ 781

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPES 976
                    YT +EVK+++ N  G GPES
Sbjct: 782 P--------YTPFEVKIRSYNRRGDGPES 802



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    ++++SWEP+  
Sbjct: 782 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEPV-L 839

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 840 QDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSA--RVTGLNPNTKYHVTVRAYNRAG 897

Query: 972 PGPES 976
            GP S
Sbjct: 898 TGPAS 902


>gi|395733532|ref|XP_002813561.2| PREDICTED: contactin-3 [Pongo abelii]
          Length = 958

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 240/737 (32%), Positives = 370/737 (50%), Gaps = 24/737 (3%)

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEI 306
           + R+ L+GGNL++ +P +  D G+Y C A+N  G+I+S   +L F ++ + + + R    
Sbjct: 4   EHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLEDSDTRTRVTLT 63

Query: 307 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
              +  + + C  P ++  ++Y W  + +P+FVEED R FVS + G LY S +E  D GN
Sbjct: 64  IRDSNSQTLLCGSPEHFEQLSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGN 123

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 124 YTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 181

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P+P  NW R  G P         F+ +L IPN + ED G Y C A N R    +   
Sbjct: 182 LGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGR 241

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P++   + D  +  +  L W C A G P  +Y W +NG  L  E       +R 
Sbjct: 242 LTYYAKPHWVQLINDVEIAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERI 294

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       
Sbjct: 295 QIENGALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQV 353

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V++ C P+A+P+    WKK    +    R  + ++G L I+ V++ D+G Y+C A N
Sbjct: 354 GSLVSLDCKPKASPRAHSSWKKGDVSVQEHERISLLKDGGLKIANVTKADAGTYTCMAEN 413

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G       L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG   
Sbjct: 414 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 472

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P
Sbjct: 473 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 531

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
             V+V E+  T+A + W +G  N  P+T Y I ART ++  W  V+   + + +D   G+
Sbjct: 532 ENVKVDEITDTTAQLSWKEGKDNHSPVTSYSIQARTPFSVGWQTVT--TVPEVID---GK 586

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              +    L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +
Sbjct: 587 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 646

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YE
Sbjct: 647 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 705

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 706 VKVGVYNNKGEGPFSPV 722



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 159/657 (24%), Positives = 247/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL   N+      
Sbjct: 208 FSGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLI--NDVEIAVE 262

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 263 ------DSLYWECRASGKPKPSYRWLKNGAALVLEERIQIENGALTISNLSVTDSGMFQC 316

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 317 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPKASPRAHSSW-KK 375

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   ++D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 376 GDV------SVQEHERISLLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVT 427

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGG 633
                   P   +   GE  +V + C  +  P     F W         KKDG+     G
Sbjct: 428 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVG 485

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
                 +G+L+I  +    SG Y C          S   LIV   P   E +        
Sbjct: 486 GSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDT 542

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
              L  +        +    I       +G   +  +  P + IDG     T        
Sbjct: 543 TAQLSWKEGKDNHSPVTSYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWV 599

Query: 754 EYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT--- 799
           EYE   V  + +G         K+ T+  V    P  + GG       ++   I W    
Sbjct: 600 EYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVP 655

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE K
Sbjct: 656 EELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVK 707

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   +
Sbjct: 708 VGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNIIPWKLSNGHLL 766

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 767 GYEVRYWNGGGKEESSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 819



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/323 (21%), Positives = 127/323 (39%), Gaps = 49/323 (15%)

Query: 208 ILNDITLS--------CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLI 259
           ++ND+ ++        C A G P PSY W K          N    + ++R  +  G L 
Sbjct: 253 LINDVEIAVEDSLYWECRASGKPKPSYRWLK----------NGAALVLEERIQIENGALT 302

Query: 260 INDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD- 318
           I++   V D G + C A NK G + S +         +F+     ++     G  +  D 
Sbjct: 303 ISN-LSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDC 361

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTG 378
            P   P  +  W +      V+E +R+ +  DG L  + + + DAG Y+C  +++     
Sbjct: 362 KPKASPRAHSSWKKGDVS--VQEHERISLLKDGGLKIANVTKADAGTYTCMAENQFGKA- 418

Query: 379 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRR 436
            NG    +   P    +    P+N   +       G+ V L C     P+    + W   
Sbjct: 419 -NGTTHLVVTEPT---RITLAPSNMDVS------VGESVILPCQVQHDPLLDIIFTWYFN 468

Query: 437 GSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
           G+         +F ++       L I N++++  G+Y+C       ++ S+  + ++  P
Sbjct: 469 GALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSP 528

Query: 490 ----NFTIPLTDKHMDNQADLTW 508
               N  +   D+  D  A L+W
Sbjct: 529 GPPENVKV---DEITDTTAQLSW 548



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 126/330 (38%), Gaps = 42/330 (12%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P   W + D +          P S K +     G L I + +Q ED G
Sbjct: 175 VKLECFALGNPIPQINWRRSDGL----------PFSSKIKLRKFSGVLEIPNFQQ-EDAG 223

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYY 329
           SY C A N  G  ++      +       L    EI  ++   +++ +   +  P  +Y 
Sbjct: 224 SYECIAENSRGKNVARGRLTYYAKPHWVQLINDVEIAVED---SLYWECRASGKPKPSYR 280

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++     +EE  ++    +GAL  S L   D+G + C  ++K    G       LKV 
Sbjct: 281 WLKNGAALVLEERIQI---ENGALTISNLSVTDSGMFQCIAENK---HGLVYSSAELKVV 334

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF 449
             +      F  N  K   +  + G  V L+C     P    +W ++G     +   +  
Sbjct: 335 ASAP----DFSKNPMKKLVQV-QVGSLVSLDCKPKASPRAHSSW-KKG-----DVSVQEH 383

Query: 450 NRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
            RI       L I NV   D G Y C A N       +  + +      T+  ++  +  
Sbjct: 384 ERISLLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSV 443

Query: 503 QADLTWTCEAFGVP--DVTYSWFRNGELLN 530
              +   C+    P  D+ ++W+ NG L +
Sbjct: 444 GESVILPCQVQHDPLLDIIFTWYFNGALAD 473


>gi|194210217|ref|XP_001915523.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Equus caballus]
          Length = 1041

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 282/802 (35%), Positives = 392/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S    +TL+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLGLLF--PEESTEEKVTLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+I+S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPSKAQDAGVYQCLASNPVGTIVSREAVLRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGDLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 313

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W+C A G P  T  W RNGE       P
Sbjct: 314 RDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWSCAAAGKPRPTVRWLRNGE-------P 366

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 367 LVSQSRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTVYASAELAVQALAPDFRLNPIR 425

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG V I C P AAPK   +W K   I+ +  R  +  +G L++  +SR D G 
Sbjct: 426 RLIPAARGGEVVILCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLILRNISRSDEGK 485

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    +    NL L+C A  +  +D+ ++W
Sbjct: 486 YTCFAENFMGKANSTGVLSVRDA-TKITLAPSSADVNLGDNLTLQCHASHDPTMDLTFVW 544

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +   +     ++    G L I NA     G+Y C+ ++ V  +S + TV+V
Sbjct: 545 TLDDFPIDFDKPGSHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSVSKEATVLV 604

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V  V  T+  + W+ G  N  PI  Y + ART     W  V  +    E
Sbjct: 605 RGPPGPPGGVVVRNVGDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANVE 664

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW+ YEF+V+A N LG GEPS PS +  T    P  APS + G
Sbjct: 665 -----GNAETAQVLGLTPWTDYEFRVLASNILGTGEPSGPSSKIRTQEAAPSVAPSGLSG 719

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L ++W P+PRE QN     Y + +R++    +Q+  +    +    V    S 
Sbjct: 720 GGGAPGELVVNWTPVPREYQNGDGFGYLLSFRRQGSAGWQTARVPG-ADAQYFVYSNDSV 778

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK+++ N  G GPES
Sbjct: 779 RPYTPFEVKIRSYNRRGAGPES 800



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +   ++  ++P   P+++   G    +++++W+P+ +
Sbjct: 780 PYTPFEVKIRSYNRRGAG-PESLTALVHSAEEEPRVTPTKVWAKGVSSSEMNVTWDPVQQ 838

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +       Y  I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 839 DVNGILLGYEXIRYWKAGDKEAAADRVRTAGLDTSA--RVTGLHPNTKYHVTVRAYNRAG 896

Query: 972 PGPES 976
            GP S
Sbjct: 897 TGPAS 901


>gi|432859229|ref|XP_004069076.1| PREDICTED: contactin-4-like [Oryzias latipes]
          Length = 1011

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 250/778 (32%), Positives = 367/778 (47%), Gaps = 36/778 (4%)

Query: 206 RSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265
           +S L+ +      GG    ++EW        +L    I P +   F+LSGGNL I+   +
Sbjct: 8   KSWLSVVEWQRTVGGGGFETFEW--------KLNGTEILPKAGSHFSLSGGNLRISRLNR 59

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIGNQNWGKAMFCDPPTNYP 324
             D G+Y C ASN FG+I+S    L F ++  F   +R+P    +  G  + C PP +  
Sbjct: 60  DRDAGTYQCLASNSFGTIVSREASLTFAYLESFKTQRRSPVSVREGQGMVLLCGPPPHSG 119

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
            + + W  +    FV+++ R F+S + G LY + +E  D GNY+C V + V+ T   GP 
Sbjct: 120 DLVFSWIFNESTTFVQQETRRFISQETGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPS 179

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRR-GSPL 440
            PL +   S+    ++       FPE      G  V+LEC A G P PS  W R  G+P 
Sbjct: 180 TPLVL--RSDGVMGEYEPKIEVQFPEIVHVAKGSTVKLECFALGNPAPSITWRREDGAPF 237

Query: 441 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
           PR       N +L IP  + +D G Y C A N R   +    +S  A P+      D   
Sbjct: 238 PRKVDTRKTNGVLEIPYFQQDDVGTYECVAENSRGMNKVKGKLSFYAPPHLIEKPQDVQK 297

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
                L W C+A G P  +Y W +NGE L S       ++R  + + VL+I  L    D 
Sbjct: 298 LIDDSLVWECKATGKPKPSYRWMKNGENLES------TEERIQVANGVLSISRLTLS-DT 350

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 620
            MYQC A N+    YS+A+LRV+   P F    L S+T    GG++ + C P+ +P    
Sbjct: 351 GMYQCVAGNKHGEVYSNAELRVIAAAPDFSHNQLRSQTMVKVGGDMLVECRPKMSPWGVI 410

Query: 621 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
            W+K    +    R  I +NG+L I  V++ D+G+Y+C A N  GM  S G + V     
Sbjct: 411 SWRKGSEPLQQSNRIVILDNGSLRIWNVTKSDAGLYTCVARNQFGMASSTGSVTVKEASV 470

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINID 738
              Q P  +      ++ L C    +  L++ + W  N   +  G+ D    E       
Sbjct: 471 ITTQ-PSTLDATVGESVVLPCQVSHDPSLELKFTWFFNEQLIHFGSHD-GFFEKVGGQHS 528

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
            G + I N     AG+Y C V++ V  IS    +IV GPP  P  +QV E+  T+A++ W
Sbjct: 529 AGDIMIRNIQLKHAGKYTCAVQTKVDSISVALDLIVRGPPAPPTHIQVEEITDTTASLSW 588

Query: 799 TDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRYTGRKEASIENVLVPWSTY 856
             G  N  PIT Y I ART ++  W  V+    V+G       GR+  ++   L PW  Y
Sbjct: 589 RPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVG-------GRQLTAVVIDLNPWVEY 641

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           EF+V+A N +G GEPS PS Q  T +  P   P+ + GGGG   +L I+WEP+P E QN 
Sbjct: 642 EFRVLASNRIGTGEPSKPSKQARTKSTSPKVTPANVSGGGGSRSELVITWEPVPEELQNG 701

Query: 917 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
           P   Y + +R    T +    +         V +  S   ++ + VKV   N+ G GP
Sbjct: 702 PGFGYVVAFRPHGATGWMQAAVPS-PEASRYVFKNESIQPFSPFHVKVGVYNNEGEGP 758



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 130/340 (38%), Gaps = 58/340 (17%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYVQDRL-VANLID 244
           P+ I++P DV     ++ I + +   C A G P PSY W K     +  ++R+ VAN + 
Sbjct: 286 PHLIEKPQDV-----QKLIDDSLVWECKATGKPKPSYRWMKNGENLESTEERIQVANGV- 339

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF--NLKR 302
            LS  R TLS             D G Y C A NK G + S +         +F  N  R
Sbjct: 340 -LSISRLTLS-------------DTGMYQCVAGNKHGEVYSNAELRVIAAAPDFSHNQLR 385

Query: 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQID 362
           +  +        + C P  +  GV   W +   P  +++  R+ +  +G+L    + + D
Sbjct: 386 SQTMVKVGGDMLVECRPKMSPWGV-ISWRKGSEP--LQQSNRIVILDNGSLRIWNVTKSD 442

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECV 422
           AG Y+C  +++       G             ++       P T       G+ V L C 
Sbjct: 443 AGLYTCVARNQFGMASSTGSV---------TVKEASVITTQPSTLDAT--VGESVVLPCQ 491

Query: 423 AFGYPVPSYNWT--------RRGSPLPRNAYFENFNRI-----LTIPNVKVEDQGEYICR 469
               P     +T          GS    + +FE          + I N++++  G+Y C 
Sbjct: 492 VSHDPSLELKFTWFFNEQLIHFGS---HDGFFEKVGGQHSAGDIMIRNIQLKHAGKYTCA 548

Query: 470 ASNDRSALESSVTISIQAEPNFTIPL-TDKHMDNQADLTW 508
                 ++  ++ + ++  P     +  ++  D  A L+W
Sbjct: 549 VQTKVDSISVALDLIVRGPPAPPTHIQVEEITDTTASLSW 588


>gi|260791166|ref|XP_002590611.1| hypothetical protein BRAFLDRAFT_123608 [Branchiostoma floridae]
 gi|229275806|gb|EEN46622.1| hypothetical protein BRAFLDRAFT_123608 [Branchiostoma floridae]
          Length = 2280

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 265/814 (32%), Positives = 382/814 (46%), Gaps = 62/814 (7%)

Query: 190  PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
            P  I QP D+V+D S  +    +TL+C   G P P Y W K            ++ LSD+
Sbjct: 564  PRIIVQPEDIVYDPSSST--QRVTLNCKGEGIPAPQYRWRKN--------GQELNVLSDE 613

Query: 250  RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN- 308
            R TL GGNL+I++P++  D G Y C A N  G ++S    L F F+  F+    P +   
Sbjct: 614  RLTLIGGNLVIDNPQKDRDAGLYECLAFNDLGIVVSRPSNLTFAFVERFSTDARPGMTVL 673

Query: 309  QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGNYS 367
            +  G  + CDPP  +PG+ ++W +  FP+FV++D RVFVS   G LYF+ + + DAG Y 
Sbjct: 674  EGHGARLVCDPPEGHPGLVFHWVKTQFPSFVDQDDRVFVSETSGDLYFAQVRESDAGEYQ 733

Query: 368  CNVQS--------KVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPKTFPEAPKAGDK 416
            C VQS        ++S  GR  P   L+V    P     QL                G  
Sbjct: 734  CLVQSSTDHSPLSEISIEGRYSPPITLRVTRRPPGQVAPQLAVSERSVSAL-----RGTT 788

Query: 417  VRLECVAFGYPVPSYNWTRRG-----SPLPRNAYFENFNRILTIPNVKVEDQGEYICRAS 471
            VR+EC A+G PVP  +W R       +PLP N Y + +N+ L I  + ++D G Y CRA+
Sbjct: 789  VRMECFAYGNPVPRISWRRLDQFGVETPLPVNHYLDKWNQALIITKLDLQDAGFYECRAA 848

Query: 472  NDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
            +   +   S  + +Q  P F   L+ +H++      W     G   V+Y+W  NG++LN 
Sbjct: 849  SSSGSASGSTQLIVQGVPQFLQGLSSQHVELGGRAHWEVRTDGDYTVSYTWLHNGQVLNG 908

Query: 532  ETLPLEDQDRYFIQDN----VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
                     R  +  +     L+I  L  E D  +YQC A NQ     S+A+LR     P
Sbjct: 909  -------GGRVALASSGSTASLSISGLRAE-DSGVYQCVAFNQWGRANSAAELRAQDEPP 960

Query: 588  SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP 647
            SF  R L  E  A  GG V         P P   WKK+G  +  GGR  + + G+L I+ 
Sbjct: 961  SFGLR-LLPEIIASAGGTVVFNMRRRGVPVPTVTWKKNGANVQLGGRYSMLDGGSLRITG 1019

Query: 648  VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
            V   D G+Y+C  TN  G   S   L V  G S     P ++T+   ++  L CS     
Sbjct: 1020 VQLSDGGMYTCQLTNRMGAATSTATLTVQDGSSRSSGNPSRVTVDYQQDGTLPCSTGGSS 1079

Query: 708  LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
              DV   W HNG R+   DL+      +    G L+I   +    G Y C V++  G   
Sbjct: 1080 SSDVIKTWFHNGHRV---DLSSDHY--VKDSDGSLKILQTTKVMEGTYVCSVETRTGSRE 1134

Query: 768  TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV- 826
             +  + V   P  P  V+  +V   +  + WT G+ N  P+T Y +  RT  + +W  + 
Sbjct: 1135 QRAVLTVRASPDAPLHVRASDVSSRTGRVAWTAGSDNHSPVTGYIVQGRTQTDRSWTTLE 1194

Query: 827  --SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
              S  V+  +      R + ++  +L P + YEF+V+  N +G GEPS PSP Y+T +D 
Sbjct: 1195 SGSAEVLADD------RMQTTVSELL-PGNDYEFRVLGMNAIGLGEPSLPSPIYSTHSDA 1247

Query: 885  PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 944
            P      +GGGGG IGDL I W  L  + +  P   YKIF++K   T+  S       N+
Sbjct: 1248 PVAKVGGVGGGGGDIGDLVIRWNALAEKYRGGPGFGYKIFFKKLGSTDDFSVVQVTDPNM 1307

Query: 945  GIAVVR-IPSEFYYTEYEVKVQAINDVGPGPESE 977
               V    P    +  +E KVQA N  G GP S+
Sbjct: 1308 DHYVHSPDPPLGVFVAHEAKVQAFNQYGTGPMSD 1341


>gi|296211445|ref|XP_002752419.1| PREDICTED: contactin-1 [Callithrix jacchus]
          Length = 975

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 263/808 (32%), Positives = 390/808 (48%), Gaps = 83/808 (10%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S+   ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    +D  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNSYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 373 KGELRLYD------------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C A N  G   S G L++               I   RN  L           
Sbjct: 477 NDGGIYTCFAENNRGKANSTGTLVIT------XXXXXXXXIHYQRNFML----------- 519

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
                          D N           G L I NA    AG Y C  ++ V   S   
Sbjct: 520 ---------------DSN-----------GELLIRNAQLRHAGRYTCTAQTIVDNSSASA 553

Query: 771 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 830
            ++V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +     
Sbjct: 554 DLVVRGPPGPPGGLRIEDIRATSVGLTWSRGSDNHSPISKYTIQTKTILSDDWKDAK--- 610

Query: 831 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
              +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS
Sbjct: 611 --TDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIKTDGAAPNVAPS 668

Query: 891 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 950
            +GGGGG+  +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V +
Sbjct: 669 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHK 727

Query: 951 IPSEFYYTEYEVKVQAINDVGPGPESEV 978
             +    T ++VKV+A N+ G GP S V
Sbjct: 728 DETMSPSTAFQVKVKAFNNKGDGPYSLV 755


>gi|291402553|ref|XP_002717495.1| PREDICTED: contactin 2 [Oryctolagus cuniculus]
          Length = 1040

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 281/802 (35%), Positives = 386/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP  ++F   + S    + L+C A   P  +Y W K +  + +L          
Sbjct: 36  GPVFEEQPLGLLF--PEESTEEQVMLACRARASPPATYRW-KMNGTEMKLAPG------- 85

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 86  SRHQLMGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           +  WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HAGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPAETYALAGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 313

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       P
Sbjct: 314 RDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------P 366

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 367 LASQNRVEVSAGDLRFSRLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVR 425

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG VTI C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G 
Sbjct: 426 RLIPAARGGEVTIPCQPRAAPKAVVLWSKGTEILANSSRVTVTPDGTLIIRNISRSDEGK 485

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ +IW
Sbjct: 486 YTCFAENFMGKANSTGILSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFIW 544

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +         +     G L I NA     G+Y C+ ++ V   S + TV+V
Sbjct: 545 TLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLV 604

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  TS  + W+ G  N  PI  Y + ART     W  V  +    E
Sbjct: 605 RGPPGPPGGVVVRDIGDTSVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE 664

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+V+A N LG G+PS PS +  T    P  APS + G
Sbjct: 665 -----GNAETAQVLGLTPWMDYEFRVLASNILGTGKPSGPSSRIRTKEAAPSVAPSGLSG 719

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L ++W P+ RE QN     Y + +R++    +Q+  +    +    V    S 
Sbjct: 720 GGGAPGELVVNWTPMSREYQNGDGFGYLLSFRRQGSASWQTAQVSG-ADAQYFVYSNESI 778

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK+++ N  G GPES
Sbjct: 779 QPYTPFEVKIRSYNRRGDGPES 800



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P   P++I   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPKVVPTKIWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + +  D E  ++ ++  G    A+V        T+Y V V+A N  G
Sbjct: 838 QDVNGILLGYEIRYWRVGDKEAAADRVRTAGLDTSALVT--GLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|410920629|ref|XP_003973786.1| PREDICTED: contactin-4-like [Takifugu rubripes]
          Length = 1022

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 245/804 (30%), Positives = 379/804 (47%), Gaps = 39/804 (4%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP F ++P+D VF L+       + ++C A G P P Y W     V  R +    
Sbjct: 19  DNTRHGPVFTQEPSDSVFPLNTDD--KQVFINCRAKGNPPPHYRW----TVNGRAITAES 72

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
            P     ++L  GNL+I +P  V  RG Y C A+N FG+I+S   ++ F F+  F+ K  
Sbjct: 73  GP----NYSLVEGNLLITNPHVVNHRGVYQCIATNTFGTIVSREAKVEFAFLENFSGKPR 128

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQI 361
             +   +     + C PP +Y  + Y W  +   +F+++D R F+S   G LY + +E  
Sbjct: 129 NTVSVREGQAVVLLCGPPLHYGEIKYSWVFNGQRSFLQQDARRFISQRTGDLYIAKVEAS 188

Query: 362 DAGNYSCNVQSKVSDTGRNGPFF--PLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           D GNY+C V++ ++    N   F  P  V    +    ++       FP+A +   G  V
Sbjct: 189 DVGNYTCAVRNMMT----NATVFSSPAPVVVRRDAVMGEYEPKIEVQFPDALRVSKGSSV 244

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVPS +W R  G+PLP      +   +L IP  + ED G Y C A N R  
Sbjct: 245 KLECFALGNPVPSISWRRADGNPLPGKIKINHSAGVLEIPYFRPEDAGVYECVAENSRGR 304

Query: 477 LESSVTISIQ--AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
             +   +  Q     ++   L D  +   A L W C+A G P  TY W +NG++L +E  
Sbjct: 305 NVARGQLLFQNVEHLHWLHTLRDADIAIDAGLQWECKAMGNPRPTYKWLKNGQMLTAE-- 362

Query: 535 PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
                 R  I    LTI  ++   D  MYQC A+N+  + Y+SA+L+V+   P F  RP+
Sbjct: 363 -----GRARIDAGKLTISRIS-LLDSGMYQCVAQNEHGSIYASAELKVVASPPDFTLRPV 416

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 654
           +  T    GG   + C P A+P+    W + G ++    R+ I ++G L I+ +S+ D+G
Sbjct: 417 KKSTVVQRGGEAVLECRPRASPRAAISWWRGGQLLMDAERQTIMDDGTLRITNISKADAG 476

Query: 655 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
            Y+C A N  G   S G L+V   P+     P  + +   ++L L C   ++  L+  + 
Sbjct: 477 RYTCVARNHFGSSSSTGTLVVKE-PTRITVPPLSLDVTTGQSLVLPCEVSSDSSLNPKFK 535

Query: 715 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           W  NG  I        E       G L+ + N     +G+Y C+V + V  +S    + V
Sbjct: 536 WFFNGKAIDFSRQEHFEMIGKGFAGDLM-VRNIQLKHSGKYVCMVHTEVDTVSAAAELTV 594

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG P G+ V  +  ++  + W  G  N  P+T Y + ART ++  W       +   
Sbjct: 595 RGPPGAPEGLAVTHITDSTVQLSWGSGPDNHSPVTMYMVQARTPFSIGW-----QTVATV 649

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
            D   G+   +    L PW  YEF+V+A N +G GEPS+ + Q  T A  P  AP  + G
Sbjct: 650 PDSVPGQMMHATVKGLNPWVDYEFRVVAINSVGVGEPSTRTKQIRTKAAVPKVAPVSVSG 709

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L I+WEP+  E Q   +  Y + +R    + +  +T+         + +  + 
Sbjct: 710 GGGARGELVITWEPVSEEHQGGEDFGYVMAFRPVGSSTW-IQTVVASPEASRYIYKDDNI 768

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
              T++EVKV   N  G G  S V
Sbjct: 769 APLTQFEVKVGVYNSNGEGQFSHV 792



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 152/655 (23%), Positives = 244/655 (37%), Gaps = 72/655 (10%)

Query: 351 GALYFSALEQIDAGNYSCNVQ-SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           G L        DAG Y C  + S+  +  R    F        N + L + +    T  +
Sbjct: 279 GVLEIPYFRPEDAGVYECVAENSRGRNVARGQLLF-------QNVEHLHWLH----TLRD 327

Query: 410 APKAGDK-VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
           A  A D  ++ EC A G P P+Y W + G  L            LTI  + + D G Y C
Sbjct: 328 ADIAIDAGLQWECKAMGNPRPTYKWLKNGQMLTAEGRARIDAGKLTISRISLLDSGMYQC 387

Query: 469 RASNDRSALESSVTISIQAEP-NFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRN 525
            A N+  ++ +S  + + A P +FT+    K    Q   +    C     P    SW+R 
Sbjct: 388 VAQNEHGSIYASAELKVVASPPDFTLRPVKKSTVVQRGGEAVLECRPRASPRAAISWWRG 447

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G+LL        D +R  I D+  T+R  N  + D   Y C A+N   +  S+  L V+ 
Sbjct: 448 GQLL-------MDAERQTIMDDG-TLRITNISKADAGRYTCVARNHFGSSSSTGTL-VVK 498

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE----- 639
                   PL  +   G+   +    + +++  PKF W  +G  I    R++ FE     
Sbjct: 499 EPTRITVPPLSLDVTTGQSLVLPCEVSSDSSLNPKFKWFFNGKAI-DFSRQEHFEMIGKG 557

Query: 640 -NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L++  +    SG Y C          +   L V   P   E L   +T      +Q
Sbjct: 558 FAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAAELTVRGPPGAPEGL--AVTHITDSTVQ 615

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
           L   +  +    V            ++    + T   ++ G ++  T        +YE  
Sbjct: 616 LSWGSGPDNHSPVTMYMVQARTPF-SIGWQTVATVPDSVPGQMMHATVKGLNPWVDYEFR 674

Query: 757 CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW--TDGATNG 805
            V  ++VG         +I TK  V    P  + GG       +    I W        G
Sbjct: 675 VVAINSVGVGEPSTRTKQIRTKAAVPKVAPVSVSGGGGA----RGELVITWEPVSEEHQG 730

Query: 806 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
                Y +  R   +STW  +   V   E  RY  +     ++ + P + +E KV   N 
Sbjct: 731 GEDFGYVMAFRPVGSSTW--IQTVVASPEASRYIYK-----DDNIAPLTQFEVKVGVYNS 783

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-F 924
            G G+ S     ++   ++P +APS +        ++ + W+ +P        + Y+I F
Sbjct: 784 NGEGQFSHVVRVFSA-EEEPSEAPSSVWARAASASEIEVHWKRIPPGSSRGKILAYEILF 842

Query: 925 WRKKNDTEFQSETLKEYGNVGI--AVVRIPSEFYY-TEYEVKVQAINDVGPGPES 976
           W   +          E G V I  A   + S     T Y++ V+A N  G GP S
Sbjct: 843 WEDGSRP-------SEAGRVRIISATTALLSGLKANTAYQISVRAQNSAGFGPGS 890


>gi|148223930|ref|NP_001081205.1| contactin A precursor [Xenopus laevis]
 gi|3219157|dbj|BAA28780.1| contactin A [Xenopus laevis]
 gi|213623272|gb|AAI69517.1| Contactin A [Xenopus laevis]
          Length = 1009

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 250/798 (31%), Positives = 386/798 (48%), Gaps = 45/798 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D +F    R     ++++C A   P P Y+W K ++  D L         +
Sbjct: 24  GPVFEEQPIDTIFPEESRE--GKVSVNCRARANPPPIYKWRKNNWEIDFL---------N 72

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
           + ++L GGNL+I++P + +D   Y C  SN +G + S    L FG++  F  +   E+  
Sbjct: 73  EHYSLVGGNLVIHNPDKYKDSARYVCIVSNMYGKVWSREATLNFGYLDPFPTEERYEVKV 132

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  +NY W  + FP F+  D R FV+  +G LY + +EQ D GN
Sbjct: 133 KEGTGAVLICDPPPHFPDDLNYRWLLNEFPVFISTDNRRFVTQTNGNLYIAKVEQTDRGN 192

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK-VRLECVAF 424
           YSC V S          F  L     ++ +  ++       F +     D+ V LEC A 
Sbjct: 193 YSCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFAL 252

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +    +P +A       +L I N++ ED+G Y C A N +        + 
Sbjct: 253 GNPVPVITWRKINEAMPASAEISMSGAVLKIFNIQPEDEGTYECEAKNIKGLDTHRAYVY 312

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++  P +   + D   D  +DL W+C   G P  +  W +NG       L          
Sbjct: 313 VEGVPEWVEHINDTERDIGSDLHWSCVVKGKPQPSIRWLKNGASYGKGEL---------- 362

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           + + LT+       D  +YQC A+N     Y++A+L++L L P+F+  P+  +  A +GG
Sbjct: 363 RKSGLTLD------DAGIYQCIAENMHGIIYANAELKILALAPTFEFTPMRKKVLAAKGG 416

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPK KF W K   ++ +  R  I+++G+L I  +++ D G Y+C A N  
Sbjct: 417 RVIIECKPKAAPKAKFSWSKGTELLINNSRVSIWDDGSLEILNITKLDEGSYTCYAENDR 476

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G       L V    +     P    +    N  ++C+A  +  LD++YIW+ NG  I  
Sbjct: 477 GKANGTAVLSVT-AATKITLAPSNADVTVGENATMQCNASHDPTLDLSYIWSLNGFPI-E 534

Query: 725 MDLNE------LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
            D+ +      +  P  N  G  L I NA    AG Y C  ++ V   S    ++V GPP
Sbjct: 535 FDMEDRHYERAIRLPLQNDVGSELIIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 594

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 838
           G PGG++V E+  TS  + W+ G  N +PI+ Y I AR   +  W +V       E    
Sbjct: 595 GPPGGIRVEELRDTSVKLTWSSGTDNHQPISKYNIQARNILSDDWKDVK-----TENPNI 649

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
            G  E +    L+PW  YEF+VIA N LG GEPS PSP+  T    P  AP+ +GGGGG 
Sbjct: 650 EGYMEMARVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGS 709

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
             +L+++W+PL RE        Y + ++  N  E++ + +      G  V +  +    T
Sbjct: 710 NRELTVTWQPLSREYHYGDGFGYGVAFKPFNVREWR-KVIVSNPESGHYVHKDDTITPAT 768

Query: 959 EYEVKVQAINDVGPGPES 976
           ++++KV+A N VG GP S
Sbjct: 769 QFQIKVKAFNKVGEGPYS 786



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 163/777 (20%), Positives = 287/777 (36%), Gaps = 110/777 (14%)

Query: 248 DKRF-TLSGGNLIINDPRQVEDRGSYHCKASN---------KFGSII--SESVQLAFGFI 295
           ++RF T + GNL I    Q  DRG+Y C  S+         KF S++  +++ +    + 
Sbjct: 169 NRRFVTQTNGNLYIAKVEQT-DRGNYSCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYT 227

Query: 296 GEFNLKRAPEIGNQNWGKAMFCDPPTN-YPGVNYYWARDYFPNFVEEDKRVFVSYDGA-L 353
              N+K       ++    + C    N  P + +    +  P   E      +S  GA L
Sbjct: 228 PVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAMPASAE------ISMSGAVL 281

Query: 354 YFSALEQIDAGNYSCNVQS-KVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK 412
               ++  D G Y C  ++ K  DT R        V+     + ++  N+  +       
Sbjct: 282 KIFNIQPEDEGTYECEAKNIKGLDTHR------AYVYVEGVPEWVEHINDTERDI----- 330

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASN 472
            G  +   CV  G P PS  W + G+   +          L    + ++D G Y C A N
Sbjct: 331 -GSDLHWSCVVKGKPQPSIRWLKNGASYGKGE--------LRKSGLTLDDAGIYQCIAEN 381

Query: 473 DRSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELL 529
               + ++  + I A  P F   P+  K +  +   +   C+    P   +SW +  ELL
Sbjct: 382 MHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKGTELL 441

Query: 530 -NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
            N+  + + D         +L I  L    D   Y C A+N       +A L V T    
Sbjct: 442 INNSRVSIWDDGSL----EILNITKL----DEGSYTCYAENDRGKANGTAVLSV-TAATK 492

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKIFENG----- 641
               P  ++   GE  N T+ CN    P     ++W  +G  I      + +E       
Sbjct: 493 ITLAPSNADVTVGE--NATMQCNASHDPTLDLSYIWSLNGFPIEFDMEDRHYERAIRLPL 550

Query: 642 ------NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
                  L+I       +G Y+CTA  +     +   L+V   P     +  ++      
Sbjct: 551 QNDVGSELIIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGI--RVEELRDT 608

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
           +++L  S+ T+    ++  +      I + D  +++T N NI+G +            +Y
Sbjct: 609 SVKLTWSSGTDNHQPISK-YNIQARNILSDDWKDVKTENPNIEGYMEMARVIDLIPWMDY 667

Query: 756 E--CVVKSTVG---------KISTKTTVIVEGPPGLPGG-----VQVVEVHKTSATIQWT 799
           E   +  +T+G         KI T+    +  P  + GG        V     S    + 
Sbjct: 668 EFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTVTWQPLSREYHYG 727

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           DG   G     + +         W  V   V   E   Y  +     ++ + P + ++ K
Sbjct: 728 DGFGYGVAFKPFNV-------REWRKVI--VSNPESGHYVHK-----DDTITPATQFQIK 773

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V A N++G G  SS    Y+   D P +AP+ +        ++S++W P+  +      +
Sbjct: 774 VKAFNKVGEGPYSSTVVVYSA-EDVPTEAPTAVVYNILSSTEVSVAWHPVYEKSIEGYQV 832

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            Y   WR ++          +  ++     R+      T Y ++V+A N  G GP S
Sbjct: 833 RY---WRIQDKEAAAHRVQVKAADI---TTRLEGLMPNTHYNLEVRAFNSAGDGPPS 883


>gi|301613550|ref|XP_002936273.1| PREDICTED: contactin-2-like [Xenopus (Silurana) tropicalis]
          Length = 990

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 256/802 (31%), Positives = 388/802 (48%), Gaps = 50/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + +F     SI   +TL C A   P+ +Y W        +L    ++  +D
Sbjct: 27  GPVFEEQPENTLFP--DGSIEEQVTLPCRARASPSATYRW--------QLNGTELNLTAD 76

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
             + L GGNL I+ P Q +  G+Y C ASN  G+++S    L FG++ EF  ++   +  
Sbjct: 77  PSYRLVGGNLAISGPTQSKHAGTYQCIASNPKGTVLSSEASLRFGYLQEFPAEQRDTVKV 136

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGNY 366
            + WG  + C+PP +YPG++Y W  + FP F+  D R FVS   G LY +   + D G Y
Sbjct: 137 TEGWGVMLACNPPKHYPGLSYRWLLNEFPTFLNTDNRRFVSQVTGNLYVAQTVKEDEGAY 196

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNF-PKTFPEAPKA----------GD 415
           SC   S +S T ++          +S+F QL   +   P+T+  + K           G 
Sbjct: 197 SCLTTSHISFTTKS---------VYSSFTQLNVNSEVKPRTYAPSIKVRFPGETYALYGQ 247

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
            V LEC AFG PVP   W +    LP        + +L  P++  E+ G Y C A N   
Sbjct: 248 AVFLECFAFGNPVPHIRWRKVDGTLPPRLLV--IDPVLHFPSITFEEDGTYECEAVNSEG 305

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           +      + +QA+P +   +TD      +DL W+C A G P  T  W R+G+       P
Sbjct: 306 STTHQGRVIVQAQPEWLHVITDTEAKIGSDLLWSCAASGKPRPTIRWLRDGK-------P 358

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q    I +  +    L+   D  MYQC A+N+  T Y++A+L V  L P F+  P++
Sbjct: 359 LMTQVNIEITNGQIKFTSLS-LHDSGMYQCVAENKHGTIYTTAELTVQALAPDFRLSPVK 417

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG V I CNP AAP P  +W K   ++ +  R  +  NG L++  +SR D G 
Sbjct: 418 RLIPAARGGEVIIQCNPRAAPTPLILWSKGTELLFNSSRVTVTANGTLILRNISRSDEGK 477

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N+ G   S G L V    +     P    I    ++ L+C A  +  +D+ + W
Sbjct: 478 YTCFAENIMGKSNSTGVLSVREA-TKITLAPSGSDINQGDSITLQCHASHDPSMDLTFTW 536

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T NG+ I    +       +++   G L I NA    AG+Y C+ ++ V + S   ++++
Sbjct: 537 TLNGIPIDFEKEAQNYRRTSMDEAVGDLHIINAQLRHAGKYTCMAQTVVDRTSAMASLLI 596

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V  V +T   + W+ G  N  PI+ Y +  R      W +        E
Sbjct: 597 RGPPGPPGGVVVKYVGETMVQLSWSRGFDNHSPISRYVVQVREPLTEIWRSARTDPPTVE 656

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E+++   L  W+ Y F+++A N LG G+PS+PS    T    P  APS +GG
Sbjct: 657 -----GNAESALVVGLNQWTDYLFRIVASNILGDGDPSAPSALIRTREAAPNVAPSEVGG 711

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG   +L+I+W P+ R+ QN  +  Y I +++KN+  + +  +   G     V R  S 
Sbjct: 712 GGGAPNELTINWTPIGRQYQNGDDFGYIIAFKRKNENTWLTVRVPG-GQSQQYVYRNESI 770

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT ++VK+Q  N  G GP S
Sbjct: 771 AAYTPFDVKIQGYNKKGEGPFS 792



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 16/185 (8%)

Query: 795 TIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 851
           TI WT       NG    +     R N N TW  V   V G +  +Y  R E+     + 
Sbjct: 720 TINWTPIGRQYQNGDDFGYIIAFKRKNEN-TWLTV--RVPGGQSQQYVYRNES-----IA 771

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
            ++ ++ K+   N+ G G  S  +  Y+   ++P   PS +        D+ ++W P+  
Sbjct: 772 AYTPFDVKIQGYNKKGEGPFSRDTTVYSA-EEEPRMFPSEVKATAISSSDIEVAWNPV-- 828

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +      + Y+I + K +D E  ++ ++  G    A   + S    T Y V V+  N  G
Sbjct: 829 QTLKGVLLGYEIRYWKTSDKEAAADRVRSAGMATTA--HVTSLKPDTTYYVTVRVYNQAG 886

Query: 972 PGPES 976
            GP S
Sbjct: 887 TGPSS 891


>gi|426370197|ref|XP_004052056.1| PREDICTED: contactin-5-like, partial [Gorilla gorilla gorilla]
          Length = 783

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 228/700 (32%), Positives = 340/700 (48%), Gaps = 37/700 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F          + L+C   G P PSY W +            ID  SD
Sbjct: 92  GPVFVQEPDDIIFPTDSDE--KKVALNCEVRGNPVPSYRWLRN--------GTEIDLESD 141

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R+    
Sbjct: 142 YRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTRSAVSV 201

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 202 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSY 261

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP T   A   G  V++EC A 
Sbjct: 262 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFAL 319

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R        + 
Sbjct: 320 GNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 379

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q R  +
Sbjct: 380 VYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEM 432

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + VL I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +  
Sbjct: 433 VNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDR 491

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ +PKP   WKK    +    R  I  +G+L I   S+ D G Y C   NV 
Sbjct: 492 EVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVF 551

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G  E    L V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I  
Sbjct: 552 GSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI-- 608

Query: 725 MDLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
            D  E     E+         L I N     AG Y C V++T   +S +  ++V GPPG 
Sbjct: 609 -DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGP 667

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           PG V V E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W       +    +  TG
Sbjct: 668 PGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITG 722

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             E+++   L PW  YEF+V+A N +G G+PS+PS    T
Sbjct: 723 DMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRT 762


>gi|395838972|ref|XP_003792378.1| PREDICTED: contactin-2 [Otolemur garnettii]
          Length = 1005

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 279/802 (34%), Positives = 391/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSLLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IPN+  ED+G Y C A N + 
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPNISFEDEGTYECEAENSKG 313

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  + +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       P
Sbjct: 314 RDTVQGRVIVQAQPEWLKVISDTDADIGSNLHWGCAAAGKPRPTVRWLRNGE-------P 366

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 367 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLSPVR 425

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG V I C+P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G 
Sbjct: 426 RLIPAARGGEVIIPCHPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGK 485

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + W
Sbjct: 486 YTCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTW 544

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +      +  N+    G L I NA     G+Y C+ ++ V   S + TV+V
Sbjct: 545 TLDDFPIDFDKPGGHYQRANVKETVGDLSILNAQLRHGGKYTCMAQTVVDSASKEATVLV 604

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E
Sbjct: 605 RGPPGPPGGVVVRDISDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE 664

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + G
Sbjct: 665 -----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSG 719

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S 
Sbjct: 720 GGGAPGELIVNWTPMAREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESI 778

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK+++ N  G GPES
Sbjct: 779 RPYTPFEVKIRSYNRRGDGPES 800



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G + I+  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAG-LDIS-ARVTGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|432859227|ref|XP_004069075.1| PREDICTED: contactin-4-like [Oryzias latipes]
          Length = 1025

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 252/806 (31%), Positives = 393/806 (48%), Gaps = 41/806 (5%)

Query: 185 KIPR------GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           K+PR      GP F ++P+D++F +S     N + ++C A G P P Y W        ++
Sbjct: 20  KVPRQKNARHGPVFSQEPSDIIFPMSTGD--NLVIINCKAKGNPPPHYRW--------KV 69

Query: 239 VANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF 298
               +D  SD  + L  GNL+I++P  +   G Y C A+N FG+I+S + ++ F F+  F
Sbjct: 70  NGEDLDTNSDSNYRLLEGNLLISNPDFISHGGVYQCIATNVFGTIVSRNARVQFAFLQSF 129

Query: 299 NLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFS 356
           + K R P    +     + C PP+++  + Y W  +  P  +++D R F+S   G LY +
Sbjct: 130 SRKPRNPVSVREGQAVVLLCAPPSHHGEIQYSWVSNREPRPLQQDARRFISQRTGNLYIA 189

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAG 414
            +E  DAGNY+C V++ ++++       PL V       +   K    FP+T   +   G
Sbjct: 190 KVEAEDAGNYTCAVRNMMTNSSEFSSPTPLVVRRDVIMGEYEPKIEVRFPETLHIS--KG 247

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
             V+LEC A G PVPS +W RR       A  +  + +L IP    ED G Y C A N R
Sbjct: 248 MSVKLECFALGNPVPSISW-RRADGNSLAAKIKINHSVLEIPYFSPEDGGVYECVAENYR 306

Query: 475 SALESSVTISIQ--AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
               +   +  Q     ++   L D  M   A+L W C+AFG P  TY W +NG+     
Sbjct: 307 GKNVAKGHLIFQNVEHLHWGQTLKDAQMAIDANLQWECKAFGEPRPTYRWLKNGQ----- 361

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
             PL   DR   + N LTI  +    D  MYQC A+N   + ++SA+L+V    P F +R
Sbjct: 362 --PLTTHDRIHTEANTLTISKIA-LSDSGMYQCIAQNAFGSIHASAELKVAASPPDFTRR 418

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDD 652
           P++  T    GG + + C P+A+P+   +W +  +++  GGR+ + E+G L ++ +++ D
Sbjct: 419 PVKKATVLQRGGELVLECRPDASPRATILWWRGSDLLRGGGRQTVMEDGTLRVTNITKLD 478

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
            G Y+C A N  G   S G L+V+  P+     P     +  ++L L C   ++  L   
Sbjct: 479 EGRYTCVARNHFGASSSSG-LLVVKEPTKIIAPPLSSDASVGQSLVLPCEVASDSTLSPV 537

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
           + W  NG  I     +  E       G L+ + N     AG+Y C+V++ V  +S    +
Sbjct: 538 FKWFFNGKAIDFNRQDHFEMIGGGFAGDLM-VRNVQLKHAGKYVCMVQTEVDTVSAAANL 596

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
           IV GPPG      V +V  T+  + W+    N  PIT Y + ART ++  W       I 
Sbjct: 597 IVRGPPGASETPSVTDVTDTTVKLSWSPAPDNHSPITMYTVQARTPFSIGW-----QTIN 651

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              D   G+   +    L+PW  YEF+V+A N +G GEPS+PS    T    P  AP  +
Sbjct: 652 TVPDSVPGQMMHAFVTDLIPWVDYEFRVVAVNAVGVGEPSTPSEPIRTKPAVPRVAPINV 711

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
            GGGG  G+L I+WEP+  E+Q+  +  Y + +R    + +  +T     +    V R  
Sbjct: 712 SGGGGTQGELVITWEPVLEEQQSGEDFGYVVAFRPLGTSAW-IQTAVASPDASKYVYRND 770

Query: 953 SEFYYTEYEVKVQAINDVGPGPESEV 978
           S    +++EV V   N VG GP S+V
Sbjct: 771 SIPPLSQFEVSVGVFNSVGEGPFSQV 796



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/593 (21%), Positives = 215/593 (36%), Gaps = 48/593 (8%)

Query: 405 KTFPEAPKAGDK-VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQ 463
           +T  +A  A D  ++ EC AFG P P+Y W + G PL  +         LTI  + + D 
Sbjct: 327 QTLKDAQMAIDANLQWECKAFGEPRPTYRWLKNGQPLTTHDRIHTEANTLTISKIALSDS 386

Query: 464 GEYICRASNDRSALESSVTISIQAEP-NFTIPLTDKH--MDNQADLTWTCEAFGVPDVTY 520
           G Y C A N   ++ +S  + + A P +FT     K   +    +L   C     P  T 
Sbjct: 387 GMYQCIAQNAFGSIHASAELKVAASPPDFTRRPVKKATVLQRGGELVLECRPDASPRATI 446

Query: 521 SWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQL 580
            W+R  +LL           +  ++D  L +  +  + D   Y C A+N      SS+ L
Sbjct: 447 LWWRGSDLLRG------GGRQTVMEDGTLRVTNIT-KLDEGRYTCVARNHFGAS-SSSGL 498

Query: 581 RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE- 639
            V+         PL S+   G+   +      ++   P F W  +G  I    R+  FE 
Sbjct: 499 LVVKEPTKIIAPPLSSDASVGQSLVLPCEVASDSTLSPVFKWFFNGKAI-DFNRQDHFEM 557

Query: 640 -----NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                 G+L++  V    +G Y C          +   LIV   P   E   P +T    
Sbjct: 558 IGGGFAGDLMVRNVQLKHAGKYVCMVQTEVDTVSAAANLIVRGPPGASET--PSVTDVTD 615

Query: 695 RNLQLRCSAHTEEL--LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 752
             ++L  S   +    + +  +       IG   +N +     ++ G ++          
Sbjct: 616 TTVKLSWSPAPDNHSPITMYTVQARTPFSIGWQTINTVPD---SVPGQMMHAFVTDLIPW 672

Query: 753 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-- 810
            +YE  V +       + +   E     P   +V  ++ +       +      P+    
Sbjct: 673 VDYEFRVVAVNAVGVGEPSTPSEPIRTKPAVPRVAPINVSGGGGTQGELVITWEPVLEEQ 732

Query: 811 -------YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
                  Y +  R    S W   +  V   +  +Y  R ++     + P S +E  V   
Sbjct: 733 QSGEDFGYVVAFRPLGTSAWIQTA--VASPDASKYVYRNDS-----IPPLSQFEVSVGVF 785

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N +G G P S      +   +P +APS I G      ++ + WEP+P    N    Y  +
Sbjct: 786 NSVGEG-PFSQVVVVLSSEGEPSEAPSDIRGRAASASEIVVFWEPVPSRSTNEIISYELL 844

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           FW +                  +A ++       T Y++ V+A N  G GP S
Sbjct: 845 FWEEGTQQSDAGRVRAPNNTALLAGLK-----ASTVYQISVRAQNSAGFGPCS 892


>gi|402857489|ref|XP_003893286.1| PREDICTED: contactin-2 [Papio anubis]
          Length = 1040

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 280/801 (34%), Positives = 385/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTGILSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L +SW P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVSWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGEGPES 800



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGEG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|301606492|ref|XP_002932857.1| PREDICTED: contactin-1-like [Xenopus (Silurana) tropicalis]
          Length = 1005

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 257/803 (32%), Positives = 385/803 (47%), Gaps = 59/803 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D +F   + S+   ++++C A   P P Y+W + ++  D L         +
Sbjct: 24  GPVFEEQPIDTIF--PEESMEGKVSVNCRARANPPPVYKWRRNNWEIDLL---------N 72

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
           + ++L GGNL+IN+P + +D G Y C  SN +G + S    L FG++  F  +   E+  
Sbjct: 73  EHYSLVGGNLVINNPDKYKDSGKYVCIVSNMYGKVWSREANLNFGYLDPFPTEERYEVKV 132

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  +NY W  + FP F+  D R FV+  +G LY + +EQ D GN
Sbjct: 133 KEGTGAVLICDPPPHFPDDLNYRWLLNEFPVFISPDNRRFVTQANGNLYIAKVEQSDRGN 192

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK-VRLECVAF 424
           YSC V S          F  L     ++ +  ++       F +     D+ V LEC A 
Sbjct: 193 YSCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFAL 252

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G P+P   W +    +P +A       +L I N++ ED+G Y C A N +        + 
Sbjct: 253 GNPIPVITWRKTNEAMPASAEISMSGAVLKIFNIQPEDEGTYECEAKNIKGMDTHKAYVY 312

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++  P +   + D   D  +DL W C A G P  +  W +NG               Y  
Sbjct: 313 VEGVPEWVEHINDTERDIGSDLHWACVAKGKPQPSIRWLKNGA-------------SYGK 359

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            D  L  R L  E D  MYQC A+N     Y++A+L++L L P+F+  P+  +  A +GG
Sbjct: 360 GD--LIKRGLTLE-DAGMYQCIAENMHGIIYANAELKILALAPTFEFTPMRKKVLAAKGG 416

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPK KF W K   ++ +  R  I+++G+L I  +++ D G Y+C A N  
Sbjct: 417 RVIIECKPKAAPKAKFSWSKGTELLINSSRVSIWDDGSLEILNITKLDEGSYTCFAENDR 476

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G   S G L V    +     P    +    N  ++C A  +  LD+ +IWT NG  I  
Sbjct: 477 GKANSTGVLSVT-AATKITLAPSNADVTVGENATMQCHASHDPTLDLTFIWTLNGFPIEF 535

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           + +    E    N  G  L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 536 DKEDGHYERAIRNDVGSELVIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 595

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V+V E+  TS  + W+ G  N +PI+ Y I A+   +  W +V       E     G  E
Sbjct: 596 VRVEEIRDTSVKLTWSSGTDNHQPISKYNIQAKNILSEDWKDVK-----TENPNIEGNME 650

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            +    L+PW  YEF+V A N LG GEPS PSP+  T    P  AP+ +GGGGG   +L+
Sbjct: 651 MARAIDLIPWMDYEFRVTATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELT 710

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY------ 957
           ++W+PL RE        Y + ++  N  E++             +V  P   +Y      
Sbjct: 711 VTWQPLSREYHYGDGFGYVVAFKLFNYREWRK-----------VIVTNPESGHYVHKDDT 759

Query: 958 ----TEYEVKVQAINDVGPGPES 976
               T+++VKV+A N VG GP S
Sbjct: 760 ITPATQFQVKVKAFNKVGEGPYS 782



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 170/780 (21%), Positives = 290/780 (37%), Gaps = 105/780 (13%)

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASN---------KFGSII--SESVQL 290
            I P + +  T + GNL I    Q  DRG+Y C  S+         KF S++  +++ + 
Sbjct: 164 FISPDNRRFVTQANGNLYIAKVEQ-SDRGNYSCFVSSPSVTKSVFSKFISLLPQTDTSEK 222

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTN-YPGVNYYWARDYFPNFVEEDKRVFVSY 349
              +    N+K       ++    + C    N  P + +    +  P   E      +S 
Sbjct: 223 PKRYTPVINVKFKDTRALKDQNVTLECFALGNPIPVITWRKTNEAMPASAE------ISM 276

Query: 350 DGA-LYFSALEQIDAGNYSCNVQS-KVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407
            GA L    ++  D G Y C  ++ K  DT +        V+     + ++  N+  +  
Sbjct: 277 SGAVLKIFNIQPEDEGTYECEAKNIKGMDTHK------AYVYVEGVPEWVEHINDTERDI 330

Query: 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYI 467
                 G  +   CVA G P PS  W + G+   +    +   R LT+     ED G Y 
Sbjct: 331 ------GSDLHWACVAKGKPQPSIRWLKNGASYGKG---DLIKRGLTL-----EDAGMYQ 376

Query: 468 CRASNDRSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFR 524
           C A N    + ++  + I A  P F   P+  K +  +   +   C+    P   +SW +
Sbjct: 377 CIAENMHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSK 436

Query: 525 NGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
             ELL NS  + + D         +L I  L    D   Y C A+N      S+  L V 
Sbjct: 437 GTELLINSSRVSIWDDGSL----EILNITKL----DEGSYTCFAENDRGKANSTGVLSV- 487

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIG----SGGRRKI 637
           T        P  ++   GE  N T+ C+    P     F+W  +G  I      G   + 
Sbjct: 488 TAATKITLAPSNADVTVGE--NATMQCHASHDPTLDLTFIWTLNGFPIEFDKEDGHYERA 545

Query: 638 FEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
             N     L+I       +G Y+CTA  +  +D S     ++           ++     
Sbjct: 546 IRNDVGSELVIKNAQLKHAGRYTCTAQTI--VDNSSASADLVVRGPPGPPGGVRVEEIRD 603

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
            +++L  S+ T+    ++  +      I + D  +++T N NI+G +            +
Sbjct: 604 TSVKLTWSSGTDNHQPISK-YNIQAKNILSEDWKDVKTENPNIEGNMEMARAIDLIPWMD 662

Query: 755 YECVVKST----VG-------KISTKTTVIVEGPPGLPGG-----VQVVEVHKTSATIQW 798
           YE  V +T    VG       KI T+    +  P  + GG        V     S    +
Sbjct: 663 YEFRVTATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTVTWQPLSREYHY 722

Query: 799 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
            DG      +  +K+     W          V   E   Y  +     ++ + P + ++ 
Sbjct: 723 GDGFGY---VVAFKLFNYREWRKVI------VTNPESGHYVHK-----DDTITPATQFQV 768

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           KV A N++G G  SS    Y+   D P +AP+ I        ++S++W P+  +      
Sbjct: 769 KVKAFNKVGEGPYSSTVVIYSA-EDVPIEAPTAIVYNILSSSEVSVAWHPVYEKSIEGYQ 827

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + Y   WR ++          +  ++     R+      T Y ++V+A N  G GP S V
Sbjct: 828 VRY---WRTQDKEAAAHRVQVKASDI---TTRLEGLLPDTHYNLEVRAFNSAGDGPPSRV 881


>gi|326933669|ref|XP_003212923.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Meleagris
           gallopavo]
          Length = 1036

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 271/803 (33%), Positives = 388/803 (48%), Gaps = 53/803 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP   +F   + S    +TL C A   P  +Y W        ++    +    D
Sbjct: 31  GPVFEEQPAHTLF--PEGSAEEKVTLMCRARANPPATYRW--------KMNGTELKMGPD 80

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R+ L  G+L+I++P + +D GSY C A+N  G+++S    L FGF+ EF+ + R P   
Sbjct: 81  SRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEEREPVKI 140

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            + WG    C PP +YPG++Y W  + FPNF+  D R FVS   G LY +  E  D GNY
Sbjct: 141 AEGWGVMFTCSPPPHYPGLSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNY 200

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + +  + KA          G  
Sbjct: 201 SCFATSHID-------FITKSVF--SKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQM 251

Query: 417 VRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS   + + + +   +L I NV  ED+G Y C A N + 
Sbjct: 252 VTLECFAFGNPVPRIKWRKLDGS---QTSQWISSEPLLHIQNVDFEDEGTYECEAENIKG 308

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I I A+P++   +TD   D  +DL W+C A G P     W R+G+       P
Sbjct: 309 RDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQ-------P 361

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L  E D  MYQC A+N+  T Y+SA+L V  L P F+  P++
Sbjct: 362 LASQNRIEVSGGELRFSKLVLE-DSGMYQCVAENKHGTVYASAELTVQALAPDFRLNPVK 420

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A   G V I C P AAPK   +W K   ++ +  R  I  +G L++  +S+ D G 
Sbjct: 421 RLIPAARSGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNISKSDEGK 480

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + W
Sbjct: 481 YTCFAENFMGKANSTG-ILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTW 539

Query: 716 THNGVRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           + +   I ++D +E      ++    G L I NA    +G Y C  ++ V   S   T+ 
Sbjct: 540 SLDDFPI-DLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTVVDSTSESATLT 598

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG PGGV V ++  T+  + W+ G  N  PI  Y I ART  ++ W  +  + +  
Sbjct: 599 VRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNI 658

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           E     G  E +    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +G
Sbjct: 659 E-----GNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLG 713

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG   +L I+W P  R+ QN     Y + +RKK   E+ +  +    ++   V R  S
Sbjct: 714 GGGGAPNELIINWTPTLRDYQNGDGFGYILSFRKKGTQEWLTARVPHAESLHY-VYRNES 772

Query: 954 EFYYTEYEVKVQAINDVGPGPES 976
              YT +EVK++A N  G GPES
Sbjct: 773 IGPYTPFEVKIKAYNRKGEGPES 795



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 183/798 (22%), Positives = 294/798 (36%), Gaps = 99/798 (12%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY W   ++       N I P   +RF + + GNL I    +  D G+Y C A++ 
Sbjct: 156 YPGLSYRWLLNEF------PNFI-PADGRRFVSQTTGNLYIAK-TEASDLGNYSCFATSH 207

Query: 280 FG----SIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF 335
                 S+ S+  QL+     E   + AP I      KA F  P   Y         + F
Sbjct: 208 IDFITKSVFSKFSQLSLA--AEDARQYAPSI------KAKF--PADTYALTGQMVTLECF 257

Query: 336 PNFVEEDKRV------------FVSYDGALYFSALEQIDAGNYSCNVQS-KVSDTGRNGP 382
             F     R+            ++S +  L+   ++  D G Y C  ++ K  DT     
Sbjct: 258 A-FGNPVPRIKWRKLDGSQTSQWISSEPLLHIQNVDFEDEGTYECEAENIKGRDT----- 311

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
            +  ++  H+       P+            G  +R  CVA G P P+  W R G PL  
Sbjct: 312 -YQGRIIIHAQ------PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLAS 364

Query: 443 NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKHM- 500
               E     L    + +ED G Y C A N    + +S  +++QA  P+F +    + + 
Sbjct: 365 QNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQALAPDFRLNPVKRLIP 424

Query: 501 -DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
                 +   C+    P  T  W +  ELL + +      D   I  N+        + D
Sbjct: 425 AARSGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNI-------SKSD 477

Query: 560 PAMYQCRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
              Y C A+N +    S+  L V     +TL PS       ++   GE  N+T+ C+   
Sbjct: 478 EGKYTCFAENFMGKANSTGILSVRDATKITLAPS------SADINVGE--NLTLQCHASH 529

Query: 615 APKP--KFVWKKDGNII------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHG 665
            P     F W  D   I      G   R  + E  G+L I       SG Y+CTA  V  
Sbjct: 530 DPTMDLTFTWSLDDFPIDLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTV-- 587

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 725
           +D +     +             +       +QL  S   +    +A         + N 
Sbjct: 588 VDSTSESATLTVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSN- 646

Query: 726 DLNELETPNINIDGGLLEITNASFADAGEYECVVKST----VGKISTKTTVIV---EGPP 778
              ++ T  +NI+G        +     +YE  V ++    VG+ S  ++ I      P 
Sbjct: 647 KWKQMRTNPVNIEGNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPT 706

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 838
             P G+           I WT    + +    +  I       T   ++  V   E   Y
Sbjct: 707 VAPSGLGGGGGAPNELIINWTPTLRDYQNGDGFGYILSFRKKGTQEWLTARVPHAESLHY 766

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
             R E+     + P++ +E K+ A N  G G P S +    +  ++P  AP R+      
Sbjct: 767 VYRNES-----IGPYTPFEVKIKAYNRKGEG-PESLTAIVYSAEEEPKVAPFRVTAKAVL 820

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
             ++ +SWEP+ +       + Y+I + K  D E  ++ ++  G V  A   +      T
Sbjct: 821 SSEMDVSWEPVEQGDMTGVLLGYEIRYWKDGDKEEAADRVRTAGLVTSA--HVTGLNPNT 878

Query: 959 EYEVKVQAINDVGPGPES 976
           +Y V V+A N  G GP S
Sbjct: 879 KYHVSVRAYNRAGAGPPS 896


>gi|410986311|ref|XP_003999454.1| PREDICTED: contactin-2 [Felis catus]
          Length = 1045

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 280/802 (34%), Positives = 388/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S    +TL+C A   P  +Y W K +  + +LV         
Sbjct: 41  GPVFEDQPLGLLF--PEESTEEKVTLACRARASPPATYRW-KMNGTEMKLVPG------- 90

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+I+S    L FGF+ EF+ + R P   
Sbjct: 91  SRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTIVSREAVLRFGFLQEFSKEERDPVKT 150

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 151 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 210

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 211 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 261

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 262 VTLECFAFGNPVPQIKWRKVDGSLSPQWATAEP---TLQIPSVAFEDEGTYECEAENSKG 318

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       P
Sbjct: 319 RDTVQGRIIVQAQPEWLKVISDMEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------P 371

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P++
Sbjct: 372 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVK 430

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G 
Sbjct: 431 RLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGK 490

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    +    +L L+C A  +  +D+ +IW
Sbjct: 491 YTCFAENFMGKANSTGILSVRDA-TKITLAPSSADVNLGDSLTLQCHASHDPTMDLTFIW 549

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +         ++    G L I NA     G+Y C+ ++ V   S + TV+V
Sbjct: 550 TLDDFPIDVDKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLV 609

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V  +  T+  + W+ G  N  PI  Y + ART     W  V  +    E
Sbjct: 610 RGPPGPPGGVVVRNIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE 669

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + G
Sbjct: 670 -----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSG 724

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S 
Sbjct: 725 GGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTSWQTARVPG-ADARHFVYSNDSV 783

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK+++ N  G GPES
Sbjct: 784 QPYTPFEVKIRSYNRRGDGPES 805



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +   ++  ++P  AP+++   G    +++++WEP+ +
Sbjct: 785 PYTPFEVKIRSYNRRGDG-PESLTTLVHSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 842

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 843 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVTDLHPNTKYHVTVRAYNRAG 900

Query: 972 PGPES 976
            GP S
Sbjct: 901 TGPAS 905


>gi|306921221|dbj|BAJ17690.1| contactin 2 [synthetic construct]
          Length = 1040

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 278/801 (34%), Positives = 387/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKA 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGELL S     
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGELLAS----- 369

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 370 --QNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|355558857|gb|EHH15637.1| hypothetical protein EGK_01752 [Macaca mulatta]
          Length = 1040

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 386/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGEGPES 800



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGEG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|158260993|dbj|BAF82674.1| unnamed protein product [Homo sapiens]
          Length = 1040

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 386/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKA 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSELSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|388452968|ref|NP_001252701.1| contactin-2 precursor [Macaca mulatta]
 gi|355782630|gb|EHH64551.1| hypothetical protein EGM_17796 [Macaca fascicularis]
 gi|387542506|gb|AFJ71880.1| contactin-2 precursor [Macaca mulatta]
          Length = 1040

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 279/801 (34%), Positives = 385/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTGILSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGEGPES 800



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGEG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|120538513|gb|AAI29987.1| Contactin 2 (axonal) [Homo sapiens]
          Length = 1040

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 386/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKA 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|168272854|dbj|BAG10266.1| contactin-2 precursor [synthetic construct]
          Length = 1040

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 278/801 (34%), Positives = 387/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGELL S     
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGELLAS----- 369

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 370 --QNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|4827022|ref|NP_005067.1| contactin-2 precursor [Homo sapiens]
 gi|399092|sp|Q02246.1|CNTN2_HUMAN RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
           AltName: Full=Axonin-1; AltName: Full=Transient axonal
           glycoprotein 1; Short=TAX-1; Flags: Precursor
 gi|36675|emb|CAA48335.1| TAG-1/axonin-1 precursor [Homo sapiens]
 gi|871368|emb|CAA47963.1| transient axonal glycoprotein [Homo sapiens]
 gi|119611939|gb|EAW91533.1| contactin 2 (axonal), isoform CRA_a [Homo sapiens]
 gi|119611940|gb|EAW91534.1| contactin 2 (axonal), isoform CRA_a [Homo sapiens]
          Length = 1040

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 386/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKA 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|444868|prf||1908253A TAG-1 protein (axonin 1)
          Length = 1040

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 386/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKA 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVTFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|332811558|ref|XP_514131.3| PREDICTED: contactin-2 [Pan troglodytes]
          Length = 1005

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 386/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800


>gi|197098330|ref|NP_001124990.1| contactin-2 precursor [Pongo abelii]
 gi|55726609|emb|CAH90069.1| hypothetical protein [Pongo abelii]
          Length = 1040

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 386/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLVAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFADNFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|397504882|ref|XP_003823009.1| PREDICTED: contactin-2 [Pan paniscus]
          Length = 1040

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 386/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|441665511|ref|XP_004091817.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6 [Nomascus leucogenys]
          Length = 1018

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 261/813 (32%), Positives = 391/813 (48%), Gaps = 59/813 (7%)

Query: 184 DKIPRGPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           D +   P F ++P DV+F  DLS+    +++ L+C A GYP+P Y W +           
Sbjct: 11  DGLLSRPIFTQEPHDVIFPLDLSQ----SEVILNCAANGYPSPHYRWKQN--------GT 58

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            ID      + L GG+L I+ P   +D G Y C A+N  G+I+S   +L F +I +F  K
Sbjct: 59  DIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK 118

Query: 302 RAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
               +   +  G  + C PP ++  ++Y W  +  P +V+ED R FVS + G LY + +E
Sbjct: 119 TRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVE 178

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKV 417
             D GNY+C + +K +     GP  PL     ++    ++       FPE  +A     V
Sbjct: 179 PSDVGNYTCFITNKEAQRSVQGPPTPL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSV 236

Query: 418 RLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           +LEC A G PVP  +W R  GS LP    +     IL IPN + ED+G Y C ASN R  
Sbjct: 237 KLECFALGNPVPDISWRRLDGSSLPGKVKYSKSQAILEIPNFQQEDEGSYECIASNLRGR 296

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   +   A P +   + + ++    +L W C+A G P+  Y+W +NGE LN E    
Sbjct: 297 NLAKGQLIFYAPPEWEQKIQNTYLSIYDNLLWECKASGKPNPWYTWLKNGERLNPE---- 352

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              +R  I++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL  K     + +++
Sbjct: 353 ---ERIQIENGTLIITMLNVS-DSGVYQCAAENKYQIIYANAELRVLG-KSFIYNQQIQN 407

Query: 597 ETYAGEGGNVTIFCN-----PEAAPKPKFVWK-KDGNIIGSGGRRKIF--ENGNLLISPV 648
           +        +   CN     P   P     WK  +G+        +IF  E+G+L I  V
Sbjct: 408 D--------ILTSCNYTXSQPNFFPNMAIAWKVGEGSQTLRKSHNRIFLLEDGSLKIHNV 459

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           +R D+G Y+C ATN  G  ++ G LIV    +     P K+ +    ++ L C A  +  
Sbjct: 460 TRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQASHDPS 518

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGK 765
           +DV ++W  NG  I   DL +       I G   G L I N     +G+Y C V++T+  
Sbjct: 519 IDVVFVWFFNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLES 575

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 825
           +S    +IV GPPG P  V+V ++  T++ + W  G  N  PI  + I  RT ++  W  
Sbjct: 576 LSAVADIIVRGPPGPPEDVKVEDISSTTSQLSWRAGPDNNSPIQIFAIQTRTPFSVGW-- 633

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +    +   G+  ++    L PW  YEF+V+AGN +G GEPS PS    T A  P
Sbjct: 634 ---QAVATVPEILNGKTYSATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVP 690

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
             AP  I GGGG   +L I+WE +P E QN     Y I +R    T +  E +    +  
Sbjct: 691 VVAPVNINGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVASVESSR 750

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             V R  S    + +EVKV   N+ G G  S V
Sbjct: 751 F-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTV 782



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 182/791 (23%), Positives = 292/791 (36%), Gaps = 93/791 (11%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 145 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFITNKE 193

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 194 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 252

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  V+  K         L     +Q D G+Y C + S +   GRN     L 
Sbjct: 253 RRLDGSSLPGKVKYSKS-----QAILEIPNFQQEDEGSYEC-IASNLR--GRNLAKGQLI 304

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++Q K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 305 FYAPPEWEQ-KIQNTYLSIY-------DNLLWECKASGKPNPWYTWLKNGERLNPEERIQ 356

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
             N  L I  + V D G Y C A N    + ++  + +  +           +    + T
Sbjct: 357 IENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLGKSFIYNQQIQNDILTSCNYT 416

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567
            +   F  P++  +W + GE   S+TL       + ++D  L I  +    D   Y C A
Sbjct: 417 XSQPNF-FPNMAIAW-KVGE--GSQTLRKSHNRIFLLEDGSLKIHNVT-RSDAGSYTCIA 471

Query: 568 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKD 625
            NQ  T  ++  L ++  +      P + +   GE  ++ + C     P     FVW  +
Sbjct: 472 TNQFGTAKNTGSL-IVKERTVITVPPSKMDVTVGE--SIVLPCQASHDPSIDVVFVWFFN 528

Query: 626 GNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
           G++I        FE       G+L+I  +  + SG Y CT         +   +IV   P
Sbjct: 529 GDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPP 588

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 739
              E +  +   +    L  R        + +  I T     +G   +  +  P I ++G
Sbjct: 589 GPPEDVKVEDISSTTSQLSWRAGPDNNSPIQIFAIQTRTPFSVGWQAVATV--PEI-LNG 645

Query: 740 GLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVE 788
                T    +   EYE   V  +++G          + TK +V V  P  + GG     
Sbjct: 646 KTYSATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGG--- 702

Query: 789 VHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
             ++   I W    +   NG     Y I+ R   ++TW    E V   E  R+  R E+ 
Sbjct: 703 -SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTWSK--EKVASVESSRFVYRNES- 757

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
               ++P S +E KV   N  G G  S+ +  Y +  D+P  AP           ++ +S
Sbjct: 758 ----IIPLSPFEVKVGVYNNEGEGSLSTVTIVY-SGEDEPQLAPRGTSVQSFSASEMEVS 812

Query: 906 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
           W  +   +     + Y++ +   +  E     ++  GNV      I      T Y   V+
Sbjct: 813 WNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFASVR 870

Query: 966 AINDVGPGPES 976
           A N  G GP S
Sbjct: 871 AYNTAGTGPSS 881


>gi|426333444|ref|XP_004028287.1| PREDICTED: contactin-2 [Gorilla gorilla gorilla]
          Length = 1040

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 276/801 (34%), Positives = 387/801 (48%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W+K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATY-WWKMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 314

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 315 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 367

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 368 ASQNRVEVLAGDLQFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 426

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG + I C P +APK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 427 LIPAARGGEIVIPCQPRSAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + WT
Sbjct: 487 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWT 545

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         N+    G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 546 LDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 605

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 606 GPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 664

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + GG
Sbjct: 665 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGG 720

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S  
Sbjct: 721 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVR 779

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 780 PYTPFEVKIRSYNRRGDGPES 800



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLETSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|147898733|ref|NP_001079338.1| contactin 1 precursor [Xenopus laevis]
 gi|1843425|dbj|BAA13100.1| contactin/F3/F11 [Xenopus laevis]
          Length = 1005

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 256/803 (31%), Positives = 386/803 (48%), Gaps = 59/803 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D +F   + S    ++++C A G P P Y+W K          NL   L +
Sbjct: 24  GPVFEEQPIDTIF--PEESTEGKVSVNCRARGNPPPIYKWRKN---------NLEIDLLN 72

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
           + ++L GGNL+IN+P + +D G Y C  SN +G + S    L FG++  F  +   E+  
Sbjct: 73  EHYSLVGGNLVINNPDKYKDSGRYVCIVSNIYGKVWSREATLNFGYLDPFPTEERYEVKV 132

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP + P  +NY W  + FP F+  D R FV+  +G LY + +E +D GN
Sbjct: 133 KEGTGAVLICDPPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGN 192

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK-VRLECVAF 424
           YSC V S          F  L     ++ +  ++       F +     D+ V LEC A 
Sbjct: 193 YSCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFAL 252

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +    +P +A       +L I NV+ ED+G Y C A N +        + 
Sbjct: 253 GNPVPVITWRKINEAMPASADISMSGAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVY 312

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++  P +   + D   D  +DL W C A G P  +  W ++G        P    D   I
Sbjct: 313 VEGVPEWVEHINDTERDIGSDLHWACVARGKPQPSIRWLKDGA-------PYGKGD---I 362

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               LT+       D  MYQC A+N     Y++A+L++L L P+F+  P+  +  A +GG
Sbjct: 363 IKKGLTLE------DAGMYQCIAENIHGIIYANAELKILALAPTFEFTPMRKKVLAAKGG 416

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPK KF W K   ++ +  R  I+++G+L I+ +++ D G Y+C A N  
Sbjct: 417 RVIIECKPKAAPKAKFSWSKGTELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDR 476

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G   S G ++ +   +     P    +    N  ++C A  +  L++ +IW  NG  I  
Sbjct: 477 GKANSTG-IVSVTAATKITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNGFPIEF 535

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           + +    E    N+ G  L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 536 DKEDGHYERAIRNVVGSELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 595

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V+V E+  TS  + W+ G  N +PI+ Y I A+   +  W +V       E     G  E
Sbjct: 596 VRVEEIRDTSVKLTWSSGTDNHQPISKYNIQAQNILSEDWKDVK-----TENPNIEGNME 650

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            +    L+PW  YEF+VIA N LG GEPS PSP+  T    P  AP+ +GGGGG   +L+
Sbjct: 651 MARVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELT 710

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY------ 957
           I+W+PL RE        Y + ++  N  E++             +V  P   +Y      
Sbjct: 711 ITWQPLSREYHYGDGFGYGVAFKPFNGREWRK-----------VIVTNPESGHYVHKDDT 759

Query: 958 ----TEYEVKVQAINDVGPGPES 976
               T+++VKV+A N +G GP S
Sbjct: 760 ITPATQFQVKVKAFNKIGEGPYS 782



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 126/603 (20%), Positives = 229/603 (37%), Gaps = 92/603 (15%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P PS  W + G+P  +    +          + +ED G Y C A N 
Sbjct: 331 GSDLHWACVARGKPQPSIRWLKDGAPYGKGDIIKK--------GLTLEDAGMYQCIAENI 382

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELL- 529
              + ++  + I A  P F   P+  K +  +   +   C+    P   +SW +  ELL 
Sbjct: 383 HGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKGTELLI 442

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           N+  + + D       D  L I  +  + D   Y C A+N  + + +S  +  +T     
Sbjct: 443 NNSRVSIWD-------DGSLEITNIT-KFDEGSYTCFAEND-RGKANSTGIVSVTAATKI 493

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW----------KKDG-------NIIG 630
              P  ++   GE  N T+ C+    P  +  F+W          K+DG       N++G
Sbjct: 494 TLAPSNADVTVGE--NATMQCHASHDPTLELTFIWALNGFPIEFDKEDGHYERAIRNVVG 551

Query: 631 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 690
           S     + +N  L+        +G Y+CTA  +  +D S     ++           ++ 
Sbjct: 552 S---ELVIKNAQLI-------HAGRYTCTAQTI--VDNSSASADLVVRGPPGPPGGVRVE 599

Query: 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 750
                +++L  S+ T+    ++  +      I + D  +++T N NI+G +         
Sbjct: 600 EIRDTSVKLTWSSGTDNHQPISK-YNIQAQNILSEDWKDVKTENPNIEGNMEMARVIDLI 658

Query: 751 DAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGG-----VQVVEVHKTSA 794
              +YE   +  +T+G         KI T+    +  P  + GG        +     S 
Sbjct: 659 PWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSR 718

Query: 795 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
              + DG   G     +K      W          V   E   Y  +     ++ + P +
Sbjct: 719 EYHYGDGFGYG---VAFKPFNGREWRKVI------VTNPESGHYVHK-----DDTITPAT 764

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            ++ KV A N++G G  SS    Y+   D P +AP+ +        ++S++W P+  +  
Sbjct: 765 QFQVKVKAFNKIGEGPYSSTVVVYSA-EDVPTEAPTAVVYNILSSSEVSVAWHPVYEKSI 823

Query: 915 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
               + Y   WR ++          +  ++     R+      T Y ++V+A N  G GP
Sbjct: 824 EGYQVRY---WRIQDKEAAAHRVQVKASDI---TTRLEGLMPNTHYNIEVRAFNSAGDGP 877

Query: 975 ESE 977
            S+
Sbjct: 878 PSK 880


>gi|1430860|emb|CAA67504.1| brain-derived immunoglobulin superfamily molecule [Mus musculus]
          Length = 705

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/698 (32%), Positives = 345/698 (49%), Gaps = 34/698 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V+     GP  PL +       +   K    FP+T P   + G  V+LEC A 
Sbjct: 193 TCVVTNSVTHPKVLGPPTPLILRNDGVMGEYDPKIEVQFPETVPA--EKGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+  G    TY W +NG+       PL  +DR  
Sbjct: 311 TFYAQPNWVQIINDIHVAMEESVFWECKGNGRAKPTYRWVKNGD-------PLLTRDRIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   LTI   N + D  M Q   +N+    +SSA+L V+   P F +  L+  T    G
Sbjct: 364 IEQGTLTITKGNLQ-DAGMSQRVGENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+P+P + W+K   I+    R  I E+GNL I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G  +V+  P+     P  + +    ++ L C    +  LD+ + WT NG  I 
Sbjct: 483 FGTASSTGN-VVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLID 541

Query: 724 -NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            + D +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P 
Sbjct: 542 FDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPE 601

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V + E+  T+A + W  G  N  PIT Y I ART ++  W       +    D   G+ 
Sbjct: 602 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGKT 656

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             +    L PW  YEF+ +A N +G GEPS PS +  T
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694


>gi|344236691|gb|EGV92794.1| Contactin-2 [Cricetulus griseus]
          Length = 1008

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 277/803 (34%), Positives = 389/803 (48%), Gaps = 57/803 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S  + +TL+C A   P  +Y W        ++    ++    
Sbjct: 10  GPVFEDQPVGLLF--PEESTEDQVTLACRARASPPATYRW--------KMNGTDMNLEPG 59

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I  P + +D G Y C ASN  G+++S+   L FGF+ EF+ + R P   
Sbjct: 60  SRHQLMGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKT 119

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 120 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 179

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 180 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQ 230

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG       W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 231 VTLECFAFG----KIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 283

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P     W RNGE       P
Sbjct: 284 RDTVQGRIVVQAQPEWLKVISDTEADIGSNLRWACAAAGKPRPMVRWLRNGE-------P 336

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F++ P+ 
Sbjct: 337 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVR 395

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG ++I C P AAPK   +W K   I+G+  R  +  +G L+I  +SR D G 
Sbjct: 396 RLIPAARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGK 455

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + W
Sbjct: 456 YTCFAENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 514

Query: 716 THNGVRIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           T +   I N D         ++    G L I NA     G+Y C+ ++ V   S + TV+
Sbjct: 515 TLDDFPI-NFDKPGGHYRRASVKETIGDLTILNAQLRHGGKYMCMAQTVVDGASKEATVL 573

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART  +  W  V  + +  
Sbjct: 574 VRGPPGPPGGVVVRDIGDTTVQVSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNI 633

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           E     G  E +    L+PW  YEF+V A N LG GEPS PS +  T    P  APS + 
Sbjct: 634 E-----GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLS 688

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG  G+L I+W P+ RE QN     Y + +R++  + +Q+  +    +    V    S
Sbjct: 689 GGGGAPGELIINWTPMSREYQNGDGFGYLLSFRRQGSSVWQTARVPG-ADAQYFVYSNDS 747

Query: 954 EFYYTEYEVKVQAINDVGPGPES 976
              YT +EVK+++ N  G GPES
Sbjct: 748 IHPYTPFEVKIRSYNRRGDGPES 770



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +L++SWE + +
Sbjct: 750 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWESV-Q 807

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+   +  T+Y V V+A N  G
Sbjct: 808 QDTNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSA--RVTGLYPNTKYHVTVRAYNRAG 865

Query: 972 PGPES 976
            GP S
Sbjct: 866 TGPAS 870


>gi|52138691|ref|NP_001004395.1| contactin-2 precursor [Gallus gallus]
 gi|114735|sp|P28685.1|CNTN2_CHICK RecName: Full=Contactin-2; AltName: Full=Axonin-1; Flags: Precursor
 gi|62853|emb|CAA44815.1| axonin-1 [Gallus gallus]
          Length = 1036

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 267/802 (33%), Positives = 385/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP   +F   + S    +TL+C A   P  +Y W        ++    +    D
Sbjct: 31  GPVFEEQPAHTLF--PEGSAEEKVTLTCRARANPPATYRW--------KMNGTELKMGPD 80

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R+ L  G+L+I++P + +D GSY C A+N  G+++S    L FGF+ EF+ + R P   
Sbjct: 81  SRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKI 140

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGNY 366
            + WG    C PP +YP ++Y W  + FPNF+  D R FVS   G LY +  E  D GNY
Sbjct: 141 TEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNY 200

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + +  + KA          G  
Sbjct: 201 SCFATSHID-------FITKSVF--SKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQM 251

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +      + + + +   +L I NV  ED+G Y C A N +  
Sbjct: 252 VTLECFAFGNPVPQIKWRKLDGS--QTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGR 309

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I I A+P++   +TD   D  +DL W+C A G P     W R+G+       PL
Sbjct: 310 DTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQ-------PL 362

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  +    L    L  E D  MYQC A+N+  T Y+SA+L V  L P F+  P++ 
Sbjct: 363 ASQNRIEVSGGELRFSKLVLE-DSGMYQCVAENKHGTVYASAELTVQALAPDFRLNPVKR 421

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A   G V I C P AAPK   +W K   ++ +  R  I  +G L++  +S+ D G Y
Sbjct: 422 LIPAARSGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNISKSDEGKY 481

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + W+
Sbjct: 482 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWS 540

Query: 717 HNGVRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
            +   I ++D +E      ++    G L I NA    +G Y C  ++ V   S   T+ V
Sbjct: 541 LDDFPI-DLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTVVDSTSESATLTV 599

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y I ART  ++ W  +  + +  E
Sbjct: 600 RGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIE 659

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GG
Sbjct: 660 -----GNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGG 714

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG   +L I+W P  R+ QN     Y + +RKK    + +  +    ++   V R  S 
Sbjct: 715 GGGAPNELIINWTPTLRDYQNGDGFGYILSFRKKGTQGWLTARVPHAESLHY-VYRNESI 773

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK++A N  G GPES
Sbjct: 774 GPYTPFEVKIKAYNRKGEGPES 795



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 179/790 (22%), Positives = 291/790 (36%), Gaps = 83/790 (10%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY W   ++       N I P   +RF + + GNL I    +  D G+Y C A++ 
Sbjct: 156 YPALSYRWLLNEF------PNFI-PADGRRFVSQTTGNLYIAK-TEASDLGNYSCFATSH 207

Query: 280 FG----SIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF 335
                 S+ S+  QL+     E   + AP I      KA F        G         F
Sbjct: 208 IDFITKSVFSKFSQLSLA--AEDARQYAPSI------KAKFPADTYALTGQMVTLECFAF 259

Query: 336 PNFVEEDK---------RVFVSYDGALYFSALEQIDAGNYSCNVQS-KVSDTGRNGPFFP 385
            N V + K           ++S +  L+   ++  D G Y C  ++ K  DT      + 
Sbjct: 260 GNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDT------YQ 313

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY 445
            ++  H+       P+            G  +R  CVA G P P+  W R G PL     
Sbjct: 314 GRIIIHAQ------PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNR 367

Query: 446 FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKHM--DN 502
            E     L    + +ED G Y C A N    + +S  +++QA  P+F +    + +    
Sbjct: 368 IEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQALAPDFRLNPVKRLIPAAR 427

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
              +   C+    P  T  W +  ELL + +      D   I  N+        + D   
Sbjct: 428 SGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNI-------SKSDEGK 480

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KF 620
           Y C A+N +    S+    +L+++ + K     S      G N+T+ C+    P     F
Sbjct: 481 YTCFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTF 537

Query: 621 VWKKDGNII------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 673
            W  D   I      G   R  + E  G+L I       SG Y+CTA  V  +D +    
Sbjct: 538 TWSLDDFPIDLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTV--VDSTSESA 595

Query: 674 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 733
            +             +       +QL  S   +    +A         + N    ++ T 
Sbjct: 596 TLTVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSN-KWKQMRTN 654

Query: 734 NINIDGGLLEITNASFADAGEYECVVKST----VGKISTKTTVIV---EGPPGLPGGVQV 786
            +NI+G        +     +YE  V ++    VG+ S  ++ I      P   P G+  
Sbjct: 655 PVNIEGNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGG 714

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
                    I WT    + +    +  I       T   ++  V   E   Y  R E+  
Sbjct: 715 GGGAPNELIINWTPTLRDYQNGDGFGYILSFRKKGTQGWLTARVPHAESLHYVYRNES-- 772

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              + P++ +E K+ A N  G G P S +    +  ++P  AP R+        ++ +SW
Sbjct: 773 ---IGPYTPFEVKIKAYNRKGEG-PESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSW 828

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           EP+ +       + Y+I + K  D E  ++ ++  G V  A   +      T+Y V V+A
Sbjct: 829 EPVEQGDMTGVLLGYEIRYWKDGDKEEAADRVRTAGLVTSA--HVTGLNPNTKYHVSVRA 886

Query: 967 INDVGPGPES 976
            N  G GP S
Sbjct: 887 YNRAGAGPPS 896


>gi|334322026|ref|XP_001371582.2| PREDICTED: contactin-2-like [Monodelphis domestica]
          Length = 1205

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 273/801 (34%), Positives = 384/801 (47%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP   +F   + S    I L+C A   P  +Y W K +  + +L         D
Sbjct: 200 GPIFEDQPVSSLF--PEESSEEKIALACRARASPPATYRW-KMNGTEMKLE-------QD 249

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
             + L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 250 PHYQLVGGNLVIMNPTKAKDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 309

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 310 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 369

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       +  P + KA          G +
Sbjct: 370 SCLATSHMD-------FITKSVF--SKFAQLNLAAEDSRPSPPSIKARFPLETYALVGQQ 420

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    LP    +      L IP++  ED+G Y C A N +  
Sbjct: 421 VTLECFAFGNPVPRIKWRKMDDSLPPQ--WATAEPTLQIPSISFEDEGTYECEAENIKGR 478

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   I +QA+P +   ++D   D  ++L W C A G P     W RNG+       PL
Sbjct: 479 DIAKGRIIVQAKPEWLKVISDSEADIGSNLHWGCAAAGKPRPIVRWLRNGD-------PL 531

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  I    L    L  E D  MYQC A+N+  T Y+SA+L V    P F+  P++ 
Sbjct: 532 LSQNRVEISGGDLKFSKLVLE-DSGMYQCVAENKHGTIYASAELAVQAFAPDFRLNPVKR 590

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG V I C P +APK   +W K   I+ +  R  I  +G L++  +SR D G Y
Sbjct: 591 LIPAARGGEVIIPCQPRSAPKSIVLWSKGTEILVNSSRVTITPDGTLILRNISRSDEGKY 650

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + W+
Sbjct: 651 TCFAENFMGKANSTGILSVRDA-TKITLAPSSADINLGENLTLQCHASHDPTMDLTFTWS 709

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +G  I  +         N+    G L I NA     G+Y C+ ++ V   S   T++V 
Sbjct: 710 LDGFPIDFDKSGGHYRRANLKETIGDLTILNAQLRHGGKYTCMAQTVVDSTSETATLLVR 769

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + AR+  +  W  V  +    E 
Sbjct: 770 GPPGPPGGVVVRDISNTTVQLTWSRGFDNHSPIAKYILQARSLPDGKWKQVRTNPANIE- 828

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + GG
Sbjct: 829 ----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKESAPTIAPSGLSGG 884

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L I+W+P+ RE QN     Y + +R++  +++Q   + +   +   V R  S  
Sbjct: 885 GGAPGELIINWKPMLREYQNGEGFGYILSFRRQGSSDWQRAKVSQADALHF-VYRNESVR 943

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK++  N  G GPES
Sbjct: 944 PYTPFEVKIRGYNRQGEGPES 964



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 852  PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
            P++ +E K+   N  G G P S +    +  ++P  AP+++   G    ++++ WEP+ +
Sbjct: 944  PYTPFEVKIRGYNRQGEG-PESLTTLVYSAEEEPRVAPAKVKAKGTLSSEMNVMWEPVHQ 1002

Query: 912  EKQNAPNIYYKIFWRKKNDTEFQSETLKEYG-NVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            +  N   + Y+I + K  D E  ++ ++  G +    V  +      T+Y V V+A N  
Sbjct: 1003 DDMNGILLGYEIRYWKDGDKEAAADRVRTAGLDTSAQVTGLQPN---TKYHVTVRAYNRA 1059

Query: 971  GPGPES 976
            G GP S
Sbjct: 1060 GTGPAS 1065


>gi|348514836|ref|XP_003444946.1| PREDICTED: contactin-3-like [Oreochromis niloticus]
          Length = 1086

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 263/796 (33%), Positives = 376/796 (47%), Gaps = 34/796 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
            GP +  +P D+   +   SI  + TL+C A G P+P Y W         L   LI+   
Sbjct: 87  HGPRWRMEPGDLFIPID--SIEEEATLTCDAKGTPSPQYRW--------SLNGTLINLGL 136

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEI 306
           D+R  LSGGNLII+   + +D G Y C A N  G+I+S    L F ++  F +  R+   
Sbjct: 137 DRRRRLSGGNLIISSLDRYQDVGMYQCMAYNTVGAILSRRASLQFAYLDHFKVHTRSAVS 196

Query: 307 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C  PT+   + Y W  + +P FV++D R FVS   G LY + +E  D GN
Sbjct: 197 VREGQGVVLLCGTPTSSGDLTYAWIFNEYPYFVQQDNRRFVSQQTGNLYIAKVEPSDVGN 256

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V + ++          L +       +   K   NFP   P A   G  V LEC A
Sbjct: 257 YTCVVMNSITKGKVQSSPTSLILRTDGVMGEYEPKIEVNFPDNVPAA--KGSTVTLECFA 314

Query: 424 FGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP   W R  G P P     +  N +L IP+ + +D G Y C A N       S  
Sbjct: 315 LGNPVPEITWRRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYECVAENKMGKNTVSGR 374

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P +   + D  +  +  L W C A G P  +Y+W +NG+ L SE       DR 
Sbjct: 375 LAFYAKPQWVQTMKDTALAIEERLYWECRANGRPKPSYTWLKNGQQLLSE-------DRI 427

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            ++D VL++  L    D  MYQC A+N+    Y +A+L VL   P F    L +   A  
Sbjct: 428 HVEDGVLSVSALT-LSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNLLRALLKAKA 486

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  VT+ C P+A P    +WKK    I +  R  +  +G L ++ VS+ D+G Y+C A N
Sbjct: 487 GTTVTLECKPQAYPIASILWKKGNLPIHTNDRITLSPDGTLRLANVSKSDAGSYTCFARN 546

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             GM  + GRL+V   P+   Q P    I    ++ L C   ++ +LDV++ W  NG  I
Sbjct: 547 RFGMSSTTGRLLVTD-PTRIIQGPVDTEIIVGESIVLPCQVASDPVLDVSFSWAFNGQLI 605

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
              D    E       G L+ I N     AG+Y CVV + V  +S    +IV+GPP  P 
Sbjct: 606 AKGD-GHFEFVGGRTAGDLM-IRNIQLYHAGKYICVVDTDVESLSAVAVLIVKGPPSPPD 663

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
            V V EV  ++A + W+ G  NG PIT+Y I  RT +   W  V  + + + +D   G  
Sbjct: 664 SVTVEEVTDSTAQLAWSPGRDNGSPITNYLIQTRTPFTVGWQRV--NTVPEIID---GNT 718

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             +    L  W  Y+F+V+A N +G GEPS  S +  T    P   P  +GGGGG   +L
Sbjct: 719 LTATVVDLNAWVEYDFRVLAKNSVGVGEPSPVSVKTRTEDAVPDAVPGDVGGGGGSRYEL 778

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I+WEP+P E QN  +  Y I +R   +  +        G     V R  S   ++ + V
Sbjct: 779 VITWEPVPEELQNGESFGYIIAFRAFGEASWTHVATSAPG-ASRYVYRNDSIAPFSPFHV 837

Query: 963 KVQAINDVGPGPESEV 978
           KV   N  G GP S V
Sbjct: 838 KVGTYNSKGQGPFSPV 853


>gi|213625300|gb|AAI70294.1| Contactin/F3/F11 [Xenopus laevis]
          Length = 1005

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 255/803 (31%), Positives = 385/803 (47%), Gaps = 59/803 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D +F   + S    ++++C A   P P Y+W K          NL   L +
Sbjct: 24  GPVFEEQPIDTIF--PEESTEGKVSVNCRARANPPPIYKWRKN---------NLEIDLLN 72

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
           + ++L GGNL+IN+P + +D G Y C  SN +G + S    L FG++  F  +   E+  
Sbjct: 73  EHYSLVGGNLVINNPDKYKDSGRYVCIVSNIYGKVWSREATLNFGYLDPFPTEERYEVKV 132

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP + P  +NY W  + FP F+  D R FV+  +G LY + +E +D GN
Sbjct: 133 KEGTGAVLICDPPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGN 192

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK-VRLECVAF 424
           YSC V S          F  L     ++ +  ++       F +     D+ V LEC A 
Sbjct: 193 YSCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFAL 252

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +    +P +A       +L I NV+ ED+G Y C A N +        + 
Sbjct: 253 GNPVPVITWRKINEAMPASAEISMSGAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVY 312

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++  P +   + D   D  +DL W C A G P  +  W ++G        P    D   I
Sbjct: 313 VEGVPEWVEHINDTERDIGSDLHWACVARGKPQPSIRWLKDGA-------PYGKGD---I 362

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               LT+       D  MYQC A+N     Y++A+L++L L P+F+  P+  +  A +GG
Sbjct: 363 IKRGLTLE------DAGMYQCIAENIHGIIYANAELKILALAPTFEFTPMRKKVLAAKGG 416

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPK KF W K   ++ +  R  I+++G+L I+ +++ D G Y+C A N  
Sbjct: 417 RVIIECKPKAAPKAKFSWSKGTELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDR 476

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G   S G ++ +   +     P    +    N  ++C A  +  L++ +IW  NG  I  
Sbjct: 477 GKANSTG-IVSVTAATKITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNGFPIEF 535

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           + +    E    N+ G  L I NA    AG Y C  ++ V   S    ++V GPPG PGG
Sbjct: 536 DKEDGHYERAIRNVVGSELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGG 595

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V+V E+  TS  + W+ G  N +PI+ Y I A+   +  W +V       E     G  E
Sbjct: 596 VRVEEIRDTSVKLTWSSGTDNHQPISKYNIQAQNILSEDWKDVK-----TENPNIEGNME 650

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            +    L+PW  YEF+VIA N LG GEPS PSP+  T    P  AP+ +GGGGG   +L+
Sbjct: 651 MARVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELT 710

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY------ 957
           I+W+PL RE        Y + ++  N  E++             +V  P   +Y      
Sbjct: 711 ITWQPLSREYHYGDGFGYGVAFKPFNGREWRK-----------VIVTNPESGHYVHKDDT 759

Query: 958 ----TEYEVKVQAINDVGPGPES 976
               T+++VKV+A N +G GP S
Sbjct: 760 ITPATQFQVKVKAFNKIGEGPYS 782



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 129/603 (21%), Positives = 231/603 (38%), Gaps = 92/603 (15%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P PS  W + G+P  +    +   R LT+     ED G Y C A N 
Sbjct: 331 GSDLHWACVARGKPQPSIRWLKDGAPYGKG---DIIKRGLTL-----EDAGMYQCIAENI 382

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELL- 529
              + ++  + I A  P F   P+  K +  +   +   C+    P   +SW +  ELL 
Sbjct: 383 HGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKGTELLI 442

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           N+  + + D       D  L I  +  + D   Y C A+N  + + +S  +  +T     
Sbjct: 443 NNSRVSIWD-------DGSLEITNIT-KFDEGSYTCFAEND-RGKANSTGIVSVTAATKI 493

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW----------KKDG-------NIIG 630
              P  ++   GE  N T+ C+    P  +  F+W          K+DG       N++G
Sbjct: 494 TLAPSNADVTVGE--NATMQCHASHDPTLELTFIWALNGFPIEFDKEDGHYERAIRNVVG 551

Query: 631 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 690
           S     + +N  L+        +G Y+CTA  +  +D S     ++           ++ 
Sbjct: 552 S---ELVIKNAQLI-------HAGRYTCTAQTI--VDNSSASADLVVRGPPGPPGGVRVE 599

Query: 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 750
                +++L  S+ T+    ++  +      I + D  +++T N NI+G +         
Sbjct: 600 EIRDTSVKLTWSSGTDNHQPISK-YNIQAQNILSEDWKDVKTENPNIEGNMEMARVIDLI 658

Query: 751 DAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGG-----VQVVEVHKTSA 794
              +YE   +  +T+G         KI T+    +  P  + GG        +     S 
Sbjct: 659 PWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSR 718

Query: 795 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
              + DG   G     +K      W          V   E   Y  +     ++ + P +
Sbjct: 719 EYHYGDGFGYG---VAFKPFNGREWRKVI------VTNPESGHYVHK-----DDTITPAT 764

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            ++ KV A N++G G  SS    Y+   D P +AP+ +        ++S++W P+  +  
Sbjct: 765 QFQVKVKAFNKIGEGPYSSTVVVYSA-EDVPTEAPTAVVYNILSSSEVSVAWHPVYEKSI 823

Query: 915 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
               + Y   WR ++          +  ++     R+      T Y ++V+A N  G GP
Sbjct: 824 EGYQVRY---WRIQDKEAAAHRVQVKASDI---TTRLEGLMPNTHYNIEVRAFNSAGDGP 877

Query: 975 ESE 977
            S+
Sbjct: 878 PSK 880


>gi|403294842|ref|XP_003938372.1| PREDICTED: contactin-2 [Saimiri boliviensis boliviensis]
          Length = 1040

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 279/802 (34%), Positives = 388/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENTKG 313

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       P
Sbjct: 314 RDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------P 366

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 367 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVR 425

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G 
Sbjct: 426 RLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLVIRNISRSDEGK 485

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + W
Sbjct: 486 YTCFAENFMGKANSTG-ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 544

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +         ++    G L I NA     G+Y C+ ++ V   S + TV+V
Sbjct: 545 TLDDFPIDFDKPGGHYRRTSVKETIGDLTILNAQLRHGGKYACMAQTVVDSASKEATVLV 604

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E
Sbjct: 605 RGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYILQARTPPAGKWKQVRTNPANIE 664

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + G
Sbjct: 665 -----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSG 719

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S 
Sbjct: 720 GGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESV 778

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             Y  +EVK+++ N  G GPES
Sbjct: 779 RPYMPFEVKIRSYNRRGDGPES 800



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P+  +E K+ + N  G G P S +    +  ++P  AP+++        +++++WEP+ +
Sbjct: 780 PYMPFEVKIRSYNRRGDG-PESLTALVYSAEEEPKVAPTKVWAKAVSSSEMNVTWEPV-Q 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + +  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDMNGILLGYEIRYWRAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|296230542|ref|XP_002760749.1| PREDICTED: contactin-2 [Callithrix jacchus]
          Length = 1040

 Score =  368 bits (945), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 278/802 (34%), Positives = 386/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +    +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTDMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 313

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  ++L W C A G P     W RNGE       P
Sbjct: 314 RDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPAVRWLRNGE-------P 366

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 367 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVR 425

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G 
Sbjct: 426 RLIPAARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLVIRNISRSDEGK 485

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + W
Sbjct: 486 YTCFAENFMGKANSTG-ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 544

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +         ++    G L I NA     G+Y C+ ++ V   S + TV+V
Sbjct: 545 TLDDFPIDFDKPGGHYRRTSVKETIGDLTILNAQLRHGGKYACMAQTVVDSASKEATVLV 604

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E
Sbjct: 605 RGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYILQARTPPAGKWKQVRTNPANIE 664

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  APS + G
Sbjct: 665 -----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSG 719

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S 
Sbjct: 720 GGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESV 778

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             Y  +EVK+++ N  G GPES
Sbjct: 779 RPYMPFEVKIRSYNRRGDGPES 800



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P+  +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 780 PYMPFEVKIRSYNRRGDG-PESLTALVYSAEEEPKVAPTKVWAKGVSSSEMNVTWEPVQQ 838

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           E  N   + Y+I + +  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 839 E-MNGILLGYEIRYWRAGDKEAAADRVRTAGLDTSA--RVSGLHPSTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|395531178|ref|XP_003767659.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2 [Sarcophilus harrisii]
          Length = 1059

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 269/801 (33%), Positives = 379/801 (47%), Gaps = 49/801 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP   +F   + S    I L+C A   P  +Y W K +  + +L         D
Sbjct: 54  GPIFEDQPVSSLF--PEESSEEKIALACRARASPPATYRW-KMNGTEMKLE-------QD 103

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
             + L GGNL+I +P +  D G Y C A+N  G+++S    L FGF+ EF+ + R P   
Sbjct: 104 PHYQLVGGNLVIMNPTKTRDAGVYQCLATNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 163

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D  NY
Sbjct: 164 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDXANY 223

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       +    + KA          G +
Sbjct: 224 SCLATSHMD-------FITKSVF--SKFAQLNLAAEDSRPSSPSIKARFPLETYALVGQQ 274

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    LP    +      L IP+V  ED+G Y C A N +  
Sbjct: 275 VTLECFAFGNPVPRIKWRKLDDSLPPQ--WATAEPTLQIPSVNFEDEGTYECEAENTKGR 332

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +   I +QA+P +   ++D   D  ++L W C A G P  T  W RNG+       PL
Sbjct: 333 DTAKGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTIRWLRNGD-------PL 385

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q+R  I    L    L  E D  MYQC A+N+  T Y+SA+L V    P F+  P+  
Sbjct: 386 SSQNRVEISGGDLKFSKLVLE-DSGMYQCVAENKHGTIYASAELAVQAFAPDFRLNPVRR 444

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG V I C P +APK   +W K   I+ +  R  I  +G L++  +SR D G Y
Sbjct: 445 LIPAARGGEVIIPCQPRSAPKSIVLWSKGTEILVNSSRVTITPDGTLILRNISRSDEGKY 504

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + W 
Sbjct: 505 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGENLTLQCHASHDPTMDLTFTWA 563

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +G  I  +         ++    G L I NA     G+Y C+ ++ V   S   T++V 
Sbjct: 564 LDGFPIDFDKSGGHYRRASLKETIGDLTILNAQLRHGGKYTCMAQTVVDSTSETATLLVR 623

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGGV V ++  T+  + W+ G  N  PI  Y + AR+  +  W  V  +    E 
Sbjct: 624 GPPGPPGGVVVRDISNTTVQLTWSRGFDNHSPIAKYTLQARSLPDGKWKQVRTNPANIE- 682

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + GG
Sbjct: 683 ----GNAETAQVLGLTPWMDYEFRVVASNILGTGEPSGPSSKIRTKESAPTVAPSGLSGG 738

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L I+W P+ RE QN     Y + +R++  +++Q   +     +   V R  S  
Sbjct: 739 GGAPGELIINWTPMLREYQNGEGFGYLLSFRRQGSSDWQKAKVSHADALHF-VYRNESVR 797

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK++  N  G GPES
Sbjct: 798 PYTPFEVKIRGYNRQGEGPES 818



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+   N  G G P S +    +  ++P  AP+++   G    ++ + WEP+ +
Sbjct: 798 PYTPFEVKIRGYNRQGEG-PESLTTTVYSAEEEPRVAPAKVKAKGTLSSEMDVMWEPVHQ 856

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 857 DDMNGVLLGYEIRYWKDGDKEAAADRVRTAGLDTSA--RVTGLQPNTKYHVTVRAYNRAG 914

Query: 972 PGPES 976
            GP S
Sbjct: 915 TGPAS 919


>gi|47211486|emb|CAF95091.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1012

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 269/814 (33%), Positives = 386/814 (47%), Gaps = 67/814 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS- 247
           GP F +QP+ +++          +TLSC A   P  SY W         LV     PL  
Sbjct: 1   GPVFEEQPSSLIYPEGLTE--GKVTLSCQARASPAASYRW---------LVNGTEVPLGL 49

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEI 306
           D  +TL  G+L+I+ P    D GSY C A N+ G++IS +  L FG++ +F    R+P+ 
Sbjct: 50  DLHYTLVAGSLVISSPESHRDAGSYQCLAINRCGTVISRAATLKFGYLNDFPTDSRSPQT 109

Query: 307 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE-DKRVFVS-YDGALYFSALEQIDAG 364
             +  G  + C PP +YP ++Y W  + FPNF+++ D R FVS   G LY +  EQ D  
Sbjct: 110 AYEGAGTFLACRPPPHYPALSYRWFINEFPNFLKKSDGRWFVSQVTGNLYLANTEQSDTA 169

Query: 365 NYSC--NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP--KAGDKVRLE 420
           NY C   +  ++S          L V P ++ +  K   +    FP      AG K +LE
Sbjct: 170 NYFCFTTINMEISSKSTFSRPIQLTVLPEASPR--KSAPSIKVRFPSETYGLAGQKAQLE 227

Query: 421 CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           C A+G PVP   W +    LP           L +P++  +D+G Y C A N        
Sbjct: 228 CFAYGNPVPKLRWRKVDGLLPAKTGTSAEGPTLILPDLSFDDEGVYECEAYNSEGRETYQ 287

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             IS+QA+P +   ++D  ++  ++L W+C A G P  +  W RNG+       P+  QD
Sbjct: 288 GRISVQAQPQWLQVMSDSEVEISSELIWSCIAAGKPRPSIRWLRNGQ-------PIGTQD 340

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           R  +    L I  L  E D  MYQC A+N+  T YSSA+LRV    P F+  P+     A
Sbjct: 341 RVEVNGAKLKISNLALE-DSGMYQCVAENKHGTIYSSAELRVQVQAPDFRLNPVRKLIPA 399

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
             GG V I C P AAPKP   W +   ++ +  R  +  +G L +  +SR D G Y+C A
Sbjct: 400 ARGGQVKIECRPRAAPKPSLFWSRGTELLTNSSRVTVAPDGVLWLYNISRADEGKYTCFA 459

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
            N  G   S G L V    +     P    I    N+ L+C A  +  +D+ + WT NGV
Sbjct: 460 ENYLGKANSTGHLSVRDA-TKITLAPSNADINQGENVSLQCHASHDPTMDLTFTWTLNGV 518

Query: 721 RIGNMDLNELETPNINIDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
               +DL +   P   ++G    G L I NA  + AG Y C  ++ V   S    ++V G
Sbjct: 519 L---LDLEDPAGPYRRVEGKENIGDLMIKNAQLSQAGMYTCTAQTVVDSASAAAKLVVRG 575

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
           PPG PGG+ V  V +TS  ++W+ G  N  PI  Y I+ R   +  W  +       E  
Sbjct: 576 PPGPPGGLLVKNVAETSVELRWSRGYDNHSPIGKYVIMGRRAPSLQWRQMRTEPANIE-- 633

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
              G  E++    L+PW  YEFKVIA N LG GEPS  S    T    P  APS +GGGG
Sbjct: 634 ---GNAESARVIGLIPWMDYEFKVIASNILGSGEPSMASHTVRTQQAAPTVAPSGLGGGG 690

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE-- 954
           G   +L I+W P+ RE QN     Y + +++K+   +              ++RIP    
Sbjct: 691 GDHHELIITWTPMAREYQNGDGFGYILAFKRKHAPSW-------------TMLRIPHVDS 737

Query: 955 ---FYYTE-------YEVKVQAINDVGPGPESEV 978
               YY E       ++V ++A N  G GP S++
Sbjct: 738 SRYVYYNESLSPYSPFDVMIRAYNRRGEGPFSQI 771



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 136/583 (23%), Positives = 223/583 (38%), Gaps = 56/583 (9%)

Query: 421 CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           C+A G P PS  W R G P+      E     L I N+ +ED G Y C A N    + SS
Sbjct: 317 CIAAGKPRPSIRWLRNGQPIGTQDRVEVNGAKLKISNLALEDSGMYQCVAENKHGTIYSS 376

Query: 481 VTISIQAE-PNFTIPLTDKHM--DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
             + +Q + P+F +    K +       +   C     P  +  W R  ELL        
Sbjct: 377 AELRVQVQAPDFRLNPVRKLIPAARGGQVKIECRPRAAPKPSLFWSRGTELLT------- 429

Query: 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLKPSFKKR 592
           +  R  +  + +   Y     D   Y C A+N L    S+  L V     +TL PS    
Sbjct: 430 NSSRVTVAPDGVLWLYNISRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPSNAD- 488

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIG----SGGRRKI--FEN-GNL 643
                    +G NV++ C+    P     F W  +G ++     +G  R++   EN G+L
Sbjct: 489 -------INQGENVSLQCHASHDPTMDLTFTWTLNGVLLDLEDPAGPYRRVEGKENIGDL 541

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I       +G+Y+CTA  V     +  +L+V   P     L   +   A  +++LR S 
Sbjct: 542 MIKNAQLSQAGMYTCTAQTVVDSASAAAKLVVRGPPGPPGGL--LVKNVAETSVELRWSR 599

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
             +    +   +   G R  ++   ++ T   NI+G              +YE   +  +
Sbjct: 600 GYDNHSPIGK-YVIMGRRAPSLQWRQMRTEPANIEGNAESARVIGLIPWMDYEFKVIASN 658

Query: 762 TVGK----ISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKI 813
            +G     +++ T    +  P + P G+           I WT  A    NG    +   
Sbjct: 659 ILGSGEPSMASHTVRTQQAAPTVAPSGLGGGGGDHHELIITWTPMAREYQNGDGFGYILA 718

Query: 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
             R +  S       HV   +  RY    E+     L P+S ++  + A N  G G P S
Sbjct: 719 FKRKHAPSWTMLRIPHV---DSSRYVYYNES-----LSPYSPFDVMIRAYNRRGEG-PFS 769

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
                ++  ++P   P  I        D+ +SW+P+ +   +     Y+I + +  + E 
Sbjct: 770 QIAVVHSAEEEPTVGPLSINATALNAFDIQVSWDPVQQLSADGLLRGYEIRYWRPQEREA 829

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            ++ ++  G    A  R+      T Y V V A N  G GP S
Sbjct: 830 AADRVRTVGRETTA--RVSGLRPSTRYHVSVLAYNSAGTGPSS 870


>gi|410925449|ref|XP_003976193.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Takifugu
           rubripes]
          Length = 1041

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 269/813 (33%), Positives = 396/813 (48%), Gaps = 63/813 (7%)

Query: 189 GPYFIKQPTDVVF--DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           GP F +QP+ +++   L++  ++    LSC A   P  SY W         LV     PL
Sbjct: 30  GPVFEEQPSSLIYPEGLTEGKVI----LSCQARASPAASYRW---------LVNGTEVPL 76

Query: 247 S-DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAP 304
             D R+TL  G+L+I+ P  V D GSY C A N+ G+I+S++  + FG++ +F    R+P
Sbjct: 77  GLDLRYTLVAGSLVISSPESVRDTGSYQCLAINRCGTIVSKAASVKFGYLNDFPTDSRSP 136

Query: 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK---RVFVS-YDGALYFSALEQ 360
           +   +  G  + C PP +YP ++Y W  + FPNF++ +K   R FVS   G LY +  EQ
Sbjct: 137 QTAYEGAGTFLACRPPPHYPALSYRWFINEFPNFLKNEKSDGRWFVSQVTGNLYLAKAEQ 196

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP--KAGDKVR 418
            D GNY C     +  + ++    P ++   S+    K   +    FP      AG   +
Sbjct: 197 NDTGNYFCFTTINMDISSKSTFSRPNQLTVLSDANPRKSTPSIKVRFPAETYRLAGQTAQ 256

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           LEC A+G PVP   W +    LP  +        LT+P++  +D+G Y C A N + +  
Sbjct: 257 LECFAYGNPVPKLRWRKVDGLLPAKSGSSVEGPTLTLPDLSFDDEGIYECEAYNSQGSDA 316

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
               IS+QA+P +   ++D  ++  ++L W+C A G P  +  W RNG+ +++       
Sbjct: 317 YQGRISVQAQPQWLQVMSDSEVEISSELLWSCIAAGKPKPSVRWLRNGQSIST------- 369

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           QDR  +    L I  L  E D  MYQC A+N+  T YSSA+LRV    P F+  P+    
Sbjct: 370 QDRVEVNGARLKISNLALE-DSGMYQCVAENKHGTIYSSAELRVQVQAPDFRLNPVRKLI 428

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
            A  GG V I C P AAPKP   W +   ++ +  R  +  +G L I  +SR D G Y+C
Sbjct: 429 PAARGGQVKIECRPRAAPKPSLFWSRGTELLTNSSRVTVAPDGVLSILNISRADEGKYTC 488

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N  G   S G L V    +     P    I    N+ L+C A  +  +D+++ W  N
Sbjct: 489 FAENYLGKANSTGHLSV-RDATKITLAPSNADINQGENVSLQCHAAHDPTMDLSFSWNLN 547

Query: 719 GVRIGNMDLNELETPNINIDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           GV    +DL +   P   I+G    G L I NA  + AG Y C  ++ V   S    ++V
Sbjct: 548 GVM---LDLEDSAGPYHRIEGKENIGDLIILNAQLSQAGVYTCTAQTVVDSASAVAKLVV 604

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGG+ V  V +TS  ++W+ G  N  PI  Y I  R   +S W  +       E
Sbjct: 605 RGPPGPPGGLLVKNVAETSVELRWSRGYDNHSPIGKYVIRGRWALSSQWRQMR-----TE 659

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E++    L+PW  YEF+VIA N LG GEPS  S    T    P  APS +GG
Sbjct: 660 PSNIEGNAESARVIGLMPWMDYEFQVIASNILGSGEPSMASHTVRTQQAAPTVAPSGLGG 719

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG   +L I+W P+ RE QN     Y + +++     +   TLK        + ++ S 
Sbjct: 720 GGGDRHELIITWTPMAREYQNGDGFGYILAFKRTEAPTWT--TLK--------IPQVDSS 769

Query: 955 FY---------YTEYEVKVQAINDVGPGPESEV 978
            Y         Y+ + VK++A N  G GP S++
Sbjct: 770 RYVYYNDSLSPYSPFVVKIRAYNCRGEGPFSQI 802



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 137/585 (23%), Positives = 226/585 (38%), Gaps = 60/585 (10%)

Query: 421 CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           C+A G P PS  W R G  +      E     L I N+ +ED G Y C A N    + SS
Sbjct: 348 CIAAGKPKPSVRWLRNGQSISTQDRVEVNGARLKISNLALEDSGMYQCVAENKHGTIYSS 407

Query: 481 VTISIQAE-PNFTIPLTDKHM--DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
             + +Q + P+F +    K +       +   C     P  +  W R  ELL        
Sbjct: 408 AELRVQVQAPDFRLNPVRKLIPAARGGQVKIECRPRAAPKPSLFWSRGTELLT------- 460

Query: 538 DQDRYFIQ-DNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRV-----LTLKPSFK 590
           +  R  +  D VL+I  LN  R D   Y C A+N L    S+  L V     +TL PS  
Sbjct: 461 NSSRVTVAPDGVLSI--LNISRADEGKYTCFAENYLGKANSTGHLSVRDATKITLAPS-- 516

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNII------GSGGRRKIFEN-G 641
                      +G NV++ C+    P     F W  +G ++      G   R +  EN G
Sbjct: 517 ------NADINQGENVSLQCHAAHDPTMDLSFSWNLNGVMLDLEDSAGPYHRIEGKENIG 570

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L+I       +G+Y+CTA  V     +  +L+V   P     L   +   A  +++LR 
Sbjct: 571 DLIILNAQLSQAGVYTCTAQTVVDSASAVAKLVVRGPPGPPGGL--LVKNVAETSVELRW 628

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVV 759
           S   +    +   +   G    +    ++ T   NI+G              +YE   + 
Sbjct: 629 SRGYDNHSPIGK-YVIRGRWALSSQWRQMRTEPSNIEGNAESARVIGLMPWMDYEFQVIA 687

Query: 760 KSTVGK----ISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWTDGA---TNGRPITHY 811
            + +G     +++ T    +  P + P G+      +    I WT  A    NG    + 
Sbjct: 688 SNILGSGEPSMASHTVRTQQAAPTVAPSGLGGGGGDRHELIITWTPMAREYQNGDGFGYI 747

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
               RT    TW  +       ++ +    +     + L P+S +  K+ A N  G G P
Sbjct: 748 LAFKRTE-APTWTTL-------KIPQVDSSRYVYYNDSLSPYSPFVVKIRAYNCRGEG-P 798

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
            S     ++  ++P   P  I        ++ +SW+P+ +   +     Y+I + ++++ 
Sbjct: 799 FSQIAVVHSAEEEPTLGPLGINATALSAFEIQVSWDPIHQLSTDVLLRGYEIRYWRQHER 858

Query: 932 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           E  ++ ++  G    A  R+      T Y V V A N  G GP S
Sbjct: 859 EAAADRVRTLGQETSA--RVSGLRPSTRYHVAVLAYNSAGTGPSS 901


>gi|432866116|ref|XP_004070706.1| PREDICTED: contactin-3-like [Oryzias latipes]
          Length = 1038

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 258/798 (32%), Positives = 376/798 (47%), Gaps = 38/798 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
            GP +  +P D+   +   SI  + TL+C A G P P Y W         L   LI+   
Sbjct: 27  HGPRWRMEPGDLFIPVD--SIEEEATLTCDAKGTPAPQYRW--------SLNGTLINLSL 76

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEI 306
           D+R  LSGGNLII+   + +D G Y C A N  G+++S    L F ++  F +  R+   
Sbjct: 77  DRRRRLSGGNLIISSLDRYQDVGIYQCMAYNTVGAVLSRRASLQFAYLDHFKVHTRSAVS 136

Query: 307 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C  PT+   + Y W  + +P FV++D R FVS   G LY S +E  D GN
Sbjct: 137 VREGQGVVLLCGTPTSSGDLTYAWVFNEYPYFVQQDNRRFVSQQTGNLYISKVEPSDVGN 196

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V + ++    +     L +       +   K   +F    P A   G  V LEC A
Sbjct: 197 YTCVVMNSITKGKVHSSPTSLNLRTDGVMGEYEPKIEVHFSDNVPAA--KGTTVTLECFA 254

Query: 424 FGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP   W R  G P P     +  N ++ IP+ + +D G Y C A N      ++  
Sbjct: 255 LGNPVPEITWRRANGIPFPSKVKMKYSNAVMEIPSFQQDDAGGYECVAENKMGKNTAAGR 314

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P +   + D  +  +  L W C A G P  +Y+W +NG+ L S+       DR 
Sbjct: 315 LAFYAKPQWIQTMKDTALAIEERLNWECRANGKPKPSYTWLKNGQQLLSD-------DRT 367

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            ++D VL++  L    D  MYQC A+N+    Y +A+L VL   P F    L S   A  
Sbjct: 368 DVEDGVLSVSMLT-LTDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNVLRSLLKAKA 426

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  VT+ C P+A P    +WKK    + +  R  +  +G L ++ VS+ D+G Y+C A N
Sbjct: 427 GTTVTLECKPKAYPTANILWKKGNLPVQTNDRVTLSPDGTLRLANVSKSDAGSYTCFARN 486

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             GM  + GRL+V   P+ + Q P  + I    ++ L C   ++ +LDV++ W  NG  I
Sbjct: 487 RFGMSSTTGRLLVTD-PTRFIQGPVDMEIIVGESIVLPCQITSDPVLDVSFSWAFNGQLI 545

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
              D    E       G L+ I N     +G+Y CVV + V  +S    +IV+G P  P 
Sbjct: 546 AKGD-GHFELVGGRTAGDLM-IRNIQLYHSGKYICVVDTDVESLSAVAVLIVKGAPSPPD 603

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW--FNVSEHVIGKEVDRYTG 840
            V V EV  ++A + W+ G  NG PIT+Y I  RT +   W   N    +I       +G
Sbjct: 604 SVTVEEVTDSTAQLAWSPGRDNGSPITNYLIQTRTPFTVGWQRVNTVPEII-------SG 656

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
               +    L  W  YEF+V+A N +G GEPS  S +  T    P  AP  +GGGGG   
Sbjct: 657 NTLTATVVDLNAWVEYEFRVLAKNSVGVGEPSPISVKTRTEDAVPDVAPGDVGGGGGSRS 716

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           +L I+WEP+P E QN  +  Y I +R   +  +        G     V R  S   ++ +
Sbjct: 717 ELVITWEPVPEELQNGESFGYIIAFRAFGEVSWIHVATSAPG-ASRYVYRNDSIAPFSPF 775

Query: 961 EVKVQAINDVGPGPESEV 978
            VKV   N  G GP S V
Sbjct: 776 HVKVGTYNSKGQGPFSPV 793


>gi|301765666|ref|XP_002918250.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Ailuropoda
           melanoleuca]
          Length = 1040

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 278/802 (34%), Positives = 385/802 (48%), Gaps = 51/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S    +TL+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLGLLF--PEESTEEKVTLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVRT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 257 VTLECFAFGNPVPQIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 313

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  + +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       P
Sbjct: 314 RDTVQGRVIVQAQPEWLKVISDMEADIGSNLGWGCAAAGKPRPTVRWLRNGE-------P 366

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P++
Sbjct: 367 LASQPRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVK 425

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG + I C P AAPK   +W K   I+ +  R  +   G L+I  +SR D G 
Sbjct: 426 RLIPAARGGEIAIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPGGTLIIRNISRSDEGK 485

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    +L L+C A  +  +D+ +IW
Sbjct: 486 YTCFAENFMGKANSTGILSVRDA-TKITLAPSSADINLGDSLTLQCHASHDPTMDLTFIW 544

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +         +     G L I NA     G+Y C+ ++ V   S + TV+V
Sbjct: 545 TLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLV 604

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V  +  T+  + W+ G  N  PI  Y + ART     W  V  +    E
Sbjct: 605 RGPPGPPGGVVVRNIGDTTVQLSWSRGFDNHSPIAKYTLQARTVPAGKWKQVRTNPANIE 664

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + G
Sbjct: 665 -----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSG 719

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L ++W P+ RE QN     Y + +R++  + +Q+  +    +    V    S 
Sbjct: 720 GGGAPGELIVNWTPMSREYQNGDGFGYVLSFRRQGSSGWQTARVPG-ADAQHFVYSNDSV 778

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK++  N    GPES
Sbjct: 779 RPYTPFEVKIRGYNRRXDGPES 800



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+   N    G P S +    +  ++P  AP+++   G    +++++WEP  +
Sbjct: 780 PYTPFEVKIRGYNRRXDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEP-GQ 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + +  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 838 QDTNGILLGYEIRYWRAGDKEAAADRVRTAGLDTRA--RVTGLHPNTKYHVTVRAYNRAG 895

Query: 972 PGPES 976
            GP S
Sbjct: 896 TGPAS 900


>gi|405964955|gb|EKC30393.1| Contactin [Crassostrea gigas]
          Length = 1421

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 240/732 (32%), Positives = 358/732 (48%), Gaps = 73/732 (9%)

Query: 141  RWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVV 200
            ++   +  G +   + CE +  +   ++ DDR + YG +  + +  PRGP F   PTD+ 
Sbjct: 327  QYSLTKGDGSKKYSYTCETAKSEAFRIIQDDRDFTYGTNYPDEESAPRGPKFYLYPTDIE 386

Query: 201  FDLSKRSILNDITLSCYAGGYPNPSYEWF--KEDYVQDRLVANLIDPLSDKRFTLSGGNL 258
               S     +++ L C A G   P Y+W   +ED  Q R       P+   R+ ++ G +
Sbjct: 387  ILGST----SEVYLECAATGLTQPRYQWTVTREDG-QTR-------PIVGPRYIVTNGRV 434

Query: 259  IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFC 317
             IN+P+   D GSY C A N+FG +++  V L+F  +GEF N+  AP    +  G  + C
Sbjct: 435  SINNPQVALDGGSYQCSAKNEFGVVLTPPVVLSFADLGEFSNVDTAPIRPLEYQGTVIQC 494

Query: 318  DPPTN------------YPGVNYYWARDYF-PNFVEEDKRVFVSYDGALYFSALEQIDAG 364
               ++               ++Y W +D   P        +F+S DG LYFS + + D G
Sbjct: 495  PKISSTSSLYFNMHHFELAAISYNWIKDQTTPINSRLTPYLFISGDGQLYFSEVTRGDNG 554

Query: 365  NYSC-----------NVQSKVSDTGRNGPFFPLKVFPH-SNFQQLKFPNNFPKTFPEAPK 412
             Y C           N         R     PL+V    S    ++ P++F + FP  P 
Sbjct: 555  MYYCMATLTYPTDRDNYAGSFQSPSRISTGIPLQVQGSPSGILNVQIPDSFIQVFPRQPV 614

Query: 413  AGDKVRLECVAFGYPVPSYNW---TRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
             G  VRLEC A+G     Y W   T R  P  R   F + +R+LTI  V ++D G Y C 
Sbjct: 615  VGVDVRLECFAYGSGPLVYQWFLPTLR-DPGTR-VRFTDSDRVLTIVGVTLQDAGVYTCV 672

Query: 470  ASNDRSALESSVT--ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
             S+ RS      T  ++I+A+P FT+PL D+H D +++L W C+AFG+P  TY+W+RNG+
Sbjct: 673  CSSRRSGTRDQKTFHLAIEAKPVFTVPLRDQHADRESELVWRCQAFGIPRPTYTWYRNGQ 732

Query: 528  LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
            LL+ ++          I  N LTI  L  E    MYQC A N      S+AQLRVL+  P
Sbjct: 733  LLSGDS-------NLIITGNTLTIPRLG-ESQAGMYQCMASNSHGVVTSTAQLRVLSFPP 784

Query: 588  SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII-------GSGGRRKIFEN 640
            SFKKRPLES T    GG+ TI C+PEAAP+P   W  +G++I       G+    +   +
Sbjct: 785  SFKKRPLESTTIGSLGGSATILCHPEAAPRPNITWLYEGHVIPGDSEQDGTPAHLQSLTS 844

Query: 641  GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
            G+L I  +S  D G+Y+C A N+HG  +S   L VL G +   + P  +T+  +    L 
Sbjct: 845  GHLRIVNLSYTDQGLYTCKAVNIHGTVQSSTELTVL-GRTVMVERPSTVTVVMNGTALLS 903

Query: 701  CSAHTEELLDVAYIWTHNGVRIGNMDLN--ELETPNINIDGGLLEITNASFADAGEYECV 758
            C A     L++ Y W+ N   I     N  ++ +P      G L I    F  AG Y C 
Sbjct: 904  CRASYSPSLELVYTWSFNDQSIDPEQDNNFKMRSPFT----GDLYIVMTQFRHAGVYTCT 959

Query: 759  VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT----SATIQWTDGATNGRPITHYKII 814
              + +  + T  T+ V GPPG P GV VV+   +       + W DG T+GRP+  Y I 
Sbjct: 960  ASTQLDFVITSATLSVLGPPGEPFGVHVVKRQSSIDPYIIHLAWQDGVTHGRPVQAYSIF 1019

Query: 815  ARTNWNSTWFNV 826
             ++N++ + +N+
Sbjct: 1020 TKSNYSESKWNM 1031


>gi|190339368|gb|AAI62590.1| Contactin 2 [Danio rerio]
          Length = 1040

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 262/804 (32%), Positives = 386/804 (48%), Gaps = 47/804 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP+ +++          +TLSC A   P   Y W        R+    I    +
Sbjct: 33  GPVFEEQPSSLIYPEGMPE--GKVTLSCQARSSPAAVYRW--------RVNGTDISFAEE 82

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
             +T   GNL+IN+P+   D GSY C A N+ G+I+S    L FG++ +F  + R+P+  
Sbjct: 83  SHYTQVAGNLVINNPQNGRDGGSYQCLAINRCGTIVSRVANLKFGYLHDFPPESRSPQTV 142

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE-EDKRVFVS-YDGALYFSALEQIDAGN 365
           ++  G  + C PP +YP ++Y W  + FPNF++ E  R FVS   G LY +     D GN
Sbjct: 143 HEGMGTFLACQPPAHYPALSYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGN 202

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVA 423
           Y C     +  + ++     +++  H +    K   N    FP    A  G   +LEC A
Sbjct: 203 YFCFTTINMDVSTKSIFSKAVQLTVHPDASPRKTAPNIRVRFPAETYALSGQTAQLECFA 262

Query: 424 FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           +G P+P   W +    LP          IL IP +  +D+G Y C   N          +
Sbjct: 263 YGNPIPKIRWRKVDGILPPKVGASVDGPILIIPELNFDDEGMYECEVYNSEGRETHQGRV 322

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           S+QA+P++   ++D  ++  ++L W+C A G P  T  W RNG  L +       QDR  
Sbjct: 323 SVQAQPDWLQVMSDSEVEISSELQWSCAAAGKPRPTIRWLRNGHALIT-------QDRVE 375

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           + +  L I  L  E D  MYQC A+N+  T YS+A+LRV    P F+  P+     A  G
Sbjct: 376 VNNGRLKIANLALE-DSGMYQCVAENKHSTIYSNAELRVQVQAPDFRLNPVRKLVPAARG 434

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V + C P AAPKP   W +   ++ +  R  +  +G L I  +SR D G Y+C A N 
Sbjct: 435 GQVKMECKPRAAPKPTLFWSRGTELLTNSTRITVTPDGILWIYNISRADEGKYTCFAENY 494

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L V    +     P    I    N  L+C A  +  +D+ + W+ NGV + 
Sbjct: 495 LGKANSTGHLSVRDA-TKITLAPSNADINQGENATLQCHASHDPTMDLTFTWSLNGVPL- 552

Query: 724 NMDLNELETPNIN---IDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
                +LE PN +   ++G    G L I N   + AG Y C  ++ V        ++V G
Sbjct: 553 -----DLEEPNGHYRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKLVVRG 607

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
           PPG PGG+ V  V+ TS  ++W+ G  N  PI  Y I+ R++    W  +       E  
Sbjct: 608 PPGPPGGLVVTSVNDTSVELRWSRGYDNHSPIGKYVILGRSSQTHDWKRMRTDPANIE-- 665

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
              G  E++    L PW  YEF+VIA N LG GEPS PSP+  T    P  APS +GGGG
Sbjct: 666 ---GNAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLGGGG 722

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA--VVRIPSE 954
           G   +L I+W P+ RE QN  +  Y + +RK+      + T+ +  NV  +  V    S 
Sbjct: 723 GNRNELIITWTPMAREYQNGDSFGYILAFRKQG---IPTWTVVKVPNVESSRYVYSNDSL 779

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
             Y  +EV+++A N  G GP S++
Sbjct: 780 TAYCPFEVRIKAYNKKGEGPFSQI 803



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 186/802 (23%), Positives = 293/802 (36%), Gaps = 103/802 (12%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY WF  ++       N I P + + F +   GNL + + R   D G+Y C  +  
Sbjct: 158 YPALSYRWFINEF------PNFIQPEAGRWFVSQVTGNLYLANAR-ANDTGNYFCFTTIN 210

Query: 280 FG----SIISESVQLAFGFIGEFNLKRAPEI---------GNQNWGKAMFCDPPTN-YPG 325
                 SI S++VQL          K AP I                 + C    N  P 
Sbjct: 211 MDVSTKSIFSKAVQLTV-HPDASPRKTAPNIRVRFPAETYALSGQTAQLECFAYGNPIPK 269

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDG-ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           + +       P       +V  S DG  L    L   D G Y C V    +  GR     
Sbjct: 270 IRWRKVDGILP------PKVGASVDGPILIIPELNFDDEGMYECEV---YNSEGRETHQG 320

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
            + V    ++ Q+   +          +   +++  C A G P P+  W R G  L    
Sbjct: 321 RVSVQAQPDWLQVMSDSEV--------EISSELQWSCAAAGKPRPTIRWLRNGHALITQD 372

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHM--D 501
             E  N  L I N+ +ED G Y C A N  S + S+  + +Q + P+F +    K +   
Sbjct: 373 RVEVNNGRLKIANLALEDSGMYQCVAENKHSTIYSNAELRVQVQAPDFRLNPVRKLVPAA 432

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
               +   C+    P  T  W R  ELL + T       R  +  + +   Y     D  
Sbjct: 433 RGGQVKMECKPRAAPKPTLFWSRGTELLTNST-------RITVTPDGILWIYNISRADEG 485

Query: 562 MYQCRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 616
            Y C A+N L    S+  L V     +TL PS             +G N T+ C+    P
Sbjct: 486 KYTCFAENYLGKANSTGHLSVRDATKITLAPS--------NADINQGENATLQCHASHDP 537

Query: 617 KP--KFVWKKDG---NIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMD 667
                F W  +G   ++    G  +  E     G+L+I       +G Y+CTA  V    
Sbjct: 538 TMDLTFTWSLNGVPLDLEEPNGHYRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSA 597

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 727
            +  +L+V   P     L   +T     +++LR S   +    +   +   G      D 
Sbjct: 598 MASAKLVVRGPPGPPGGL--VVTSVNDTSVELRWSRGYDNHSPIGK-YVILGRSSQTHDW 654

Query: 728 NELETPNINIDGGLLEITNASFADAG-----EYECVVKSTVGK-----ISTKTTVIVEGP 777
             + T   NI+G      +A   D       E++ +  + +G       S +       P
Sbjct: 655 KRMRTDPANIEG---NAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAP 711

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
              P G+     ++    I WT  A    NG     Y +  R     TW  V   V   E
Sbjct: 712 TVAPSGLGGGGGNRNELIITWTPMAREYQNGDSFG-YILAFRKQGIPTWTVVK--VPNVE 768

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
             RY    ++     L  +  +E ++ A N+ G G P S     ++  ++P  +P RI  
Sbjct: 769 SSRYVYSNDS-----LTAYCPFEVRIKAYNKKGEG-PFSQIAVVHSAEEEPTVSPRRINA 822

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
                 ++ +SWEP+     N     Y+I + ++++ E  ++ ++  G    A  R+   
Sbjct: 823 TALTAFEIQVSWEPIQHLNINGVLRGYEIRYWRQHEREAAADRVRTAGLENTA--RVTGL 880

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
              T Y + V A N  G GP S
Sbjct: 881 RPNTLYHITVLAYNSAGTGPAS 902


>gi|426239383|ref|XP_004013601.1| PREDICTED: contactin-2 [Ovis aries]
          Length = 1024

 Score =  362 bits (929), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 267/804 (33%), Positives = 383/804 (47%), Gaps = 60/804 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP  ++F   + S    +TL+C A   P  +Y W K +    +L     +P S 
Sbjct: 36  GPVFEEQPLGLLFP--EESTEEKVTLACRARASPPATYRW-KMNGTDMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 87  -RQQLVGGNLVIMNPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A         T+P +  +  G+   R      
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLSPQWA---------TLPPLLSDCPGDLAPRPC---P 304

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           A   ++ +   A+P +   ++D+  D  +DL W C A G P     W   G  +++    
Sbjct: 305 APRQTLPLVSTAQPEWLRVISDREADIGSDLHWACAAAGKPRPAVRWXXXGAGVSA---- 360

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
              Q R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 361 ---QARVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVPALAPDFRLNPVR 416

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG V I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G 
Sbjct: 417 RLIPAARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGK 476

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ ++W
Sbjct: 477 YTCFAENFMGKANSTGTLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFVW 535

Query: 716 THNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +      +  ++    G L I +A     G+Y C  ++ V   S + TV+V
Sbjct: 536 TLDDFPIDSDKPGGHYQRASMKETVGDLTILSAQLRHGGKYTCTAQTVVDSASREATVLV 595

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  TS  + W+ G  N  PI  Y + ART  +  W  V  +    E
Sbjct: 596 RGPPGAPGGVVVRDISDTSVQLSWSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPANIE 655

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + G
Sbjct: 656 -----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSG 710

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
           GGG  G+L+++W P+ RE Q    +   + +R++  T +Q+  +    +    V    S 
Sbjct: 711 GGGAPGELTVTWTPVSREYQRGGGLGSLVSFRRQGSTSWQTARVPG-ADAQYFVYSNDSV 769

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
             YT +EVK+++ N  G GPES V
Sbjct: 770 RPYTPFEVKIRSYNRRGEGPESLV 793


>gi|431892898|gb|ELK03326.1| Contactin-2 [Pteropus alecto]
          Length = 1105

 Score =  362 bits (928), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 266/802 (33%), Positives = 376/802 (46%), Gaps = 54/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S    +TL+C A   P  +Y   +    + ++    +     
Sbjct: 104 GPVFEDQPLSLLF--PEESTEEKVTLACRARASPPATYRTQEGSCCRWKMNGTEMKLEPG 161

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 162 SRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 221

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 222 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 281

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F  + KA          G +
Sbjct: 282 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPAETYALVGQQ 332

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG       W +  GS  P+ A  E     L IP V  ED+G Y C A N + 
Sbjct: 333 VTLECFAFG----KIKWRKVDGSLSPQWATAEP---TLQIPRVSFEDEGTYECEAENSKG 385

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  + L W C A G P  T  W RNGE       P
Sbjct: 386 RDSVQGRIIVQAQPEWLKVISDMEADIGSSLRWGCAAAGKPRPTVRWLRNGE-------P 438

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 439 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVR 497

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG V I C P +APK   +W K   I+ +  R  +  +G L+I  +SR D G 
Sbjct: 498 RLIPAARGGEVIIPCQPRSAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGK 557

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ +IW
Sbjct: 558 YTCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFIW 616

Query: 716 THNGVRIGNMDL-NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I +          ++    G L I NA     G+Y C+ ++ V   S + TV+V
Sbjct: 617 TLDDFPIDSEKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLV 676

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART  +  W  V  +    E
Sbjct: 677 RGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPSSGKWKQVRTNPANIE 736

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW+ YEF+VIA N LG GEPS PS +  T              
Sbjct: 737 -----GNAETAQVLGLTPWTDYEFRVIASNILGTGEPSGPSSKIRTKEAGLSGGGG---- 787

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
                G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V    S 
Sbjct: 788 ---APGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTSWQTAQVPG-ADAQYFVYSNDSV 843

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
             YT +EVK+++ N  G GPES
Sbjct: 844 RPYTPFEVKIRSYNRRGNGPES 865



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 174/798 (21%), Positives = 295/798 (36%), Gaps = 111/798 (13%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY W   ++       N I P   + F + + GNL I       D G+Y C A+  
Sbjct: 237 YPGLSYRWLLNEF------PNFI-PTDGRHFVSQTTGNLYIAR-TNASDLGNYSCLAT-- 286

Query: 280 FGSIISESVQLAFGFIGEFNLKR------APEIGNQNWGKAMFCDPPTNYPGVNYYWARD 333
             S +  S +  F    + NL        AP I      KA F  P   Y  V      +
Sbjct: 287 --SHMDFSTKSVFSKFAQLNLAAEDPRLFAPSI------KARF--PAETYALVGQQVTLE 336

Query: 334 YFPNFVEEDKRV-------FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            F     + ++V       + + +  L    +   D G Y C  ++        G     
Sbjct: 337 CFAFGKIKWRKVDGSLSPQWATAEPTLQIPRVSFEDEGTYECEAENSKGRDSVQG----- 391

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
           ++   +  + LK  ++           G  +R  C A G P P+  W R G PL      
Sbjct: 392 RIIVQAQPEWLKVISDMEADI------GSSLRWGCAAAGKPRPTVRWLRNGEPLASQNRV 445

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKHM--DNQ 503
           E     L    + +ED G Y C A N    + +S  +++QA  P+F +    + +     
Sbjct: 446 EVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARG 505

Query: 504 ADLTWTCEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
            ++   C+    P     W +  E+L NS  + +         D  L IR ++   D   
Sbjct: 506 GEVIIPCQPRSAPKAVVLWSKGTEILVNSSRVTV-------TPDGTLIIRNIS-RSDEGK 557

Query: 563 YQCRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 617
           Y C A+N +    S+  L V     +TL PS     L        G N+T+ C+    P 
Sbjct: 558 YTCFAENFMGKANSTGILSVRDATKITLAPSSADINL--------GDNLTLQCHASHDPT 609

Query: 618 P--KFVWKKDGNIIGS---GG---RRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDE 668
               F+W  D   I S   GG   R  + E  G+L I        G Y+C A  V  +D 
Sbjct: 610 MDLTFIWTLDDFPIDSEKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTV--VDS 667

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
           +     VL            +       +QL  S   +    +A  +T       +    
Sbjct: 668 ASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPSSGKWK 726

Query: 729 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG-VQVV 787
           ++ T   NI+G              +YE  V          + ++  G P  P   ++  
Sbjct: 727 QVRTNPANIEGNAETAQVLGLTPWTDYEFRV--------IASNILGTGEPSGPSSKIRTK 778

Query: 788 EVHKTSATIQWTDGATNGRPITH---------YKIIARTNWNSTWFNVSEHVIGKEVDRY 838
           E   +       +   N  P++          Y +  R   +++W   +  V G +   +
Sbjct: 779 EAGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTSW--QTAQVPGADAQYF 836

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
               ++     + P++ +E K+ + N  G G P S +    +  ++P  AP+++   G  
Sbjct: 837 VYSNDS-----VRPYTPFEVKIRSYNRRGNG-PESLTALVYSAEEEPRVAPTKVWAKGVS 890

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
             +++++W+P+ ++  N   + Y+I + K  D E  ++ ++  G    A  R+      T
Sbjct: 891 SSEMNVTWDPV-QQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVTDLHPNT 947

Query: 959 EYEVKVQAINDVGPGPES 976
           +Y V V+A N  GPGP S
Sbjct: 948 KYHVTVRAYNRAGPGPAS 965


>gi|410899605|ref|XP_003963287.1| PREDICTED: contactin-3-like [Takifugu rubripes]
          Length = 1067

 Score =  362 bits (928), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 262/795 (32%), Positives = 374/795 (47%), Gaps = 34/795 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP +  +P D+   +   +I  + TL+C A G P P Y W         L   LI+   D
Sbjct: 28  GPRWRMEPGDLFIPVD--TIEEEATLTCDAKGVPPPQYRW--------SLNGTLINLGLD 77

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
           +R  LSGGNLII+   + +D G Y C A N  G+I+S    L F ++  F +  R+    
Sbjct: 78  RRRRLSGGNLIISSLDRYQDVGMYQCMAFNAAGAILSRRASLQFAYLDHFKVHTRSAVSV 137

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C  PT+   + Y W  + +P FV++D R FVS   G LY + +E  D GNY
Sbjct: 138 REGQGVVLLCGTPTSSGDLTYAWVFNEYPYFVQQDNRRFVSQQTGNLYVAKVEPSDVGNY 197

Query: 367 SCNVQSKVSD--TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V+      +     LK        + K   NFP     A   G  V LEC A 
Sbjct: 198 TCVVTNSVTKGKVHSSPTALILKTDGVMGEYEPKIEVNFPDNVSAA--RGSTVTLECFAL 255

Query: 425 GYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP   W R  G P P     +  N +L IP+ + +D G Y C A N      ++  +
Sbjct: 256 GNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYECVAENRMGKNTATGRL 315

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+P +   + D  +  +  L W C A G P  +Y+W +NG+ L S        DR  
Sbjct: 316 AFYAKPQWIQAVKDAALAIEERLHWECRANGKPKPSYTWLKNGQQLLS-------GDRIT 368

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           + D VL++  L    D  MYQC A+N+    Y +A+L VL   P F    L +   A  G
Sbjct: 369 VVDGVLSVSAL-ALSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNVLRALLKAKAG 427

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
             VT+ C P+A P    +WKK    I    R  +  +G L ++ VS+ D+G Y+C A N 
Sbjct: 428 TTVTLECKPQAYPVASILWKKGNLPIHINDRVTLSPDGTLRLANVSKSDAGGYTCFARNR 487

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            GM  + GRL+V   P+   Q P  + I    ++ L C   ++ +LDV++ W  NG  I 
Sbjct: 488 FGMSSTTGRLLVTD-PTRITQGPVDMEIIVGESIVLPCQVASDPVLDVSFSWAFNGQLIA 546

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             D    E       G L+ I N     AG+Y CVV + V  +S    +IV+GPP  P  
Sbjct: 547 KGD-GHFELVGGRTAGDLM-IRNIQLYHAGKYICVVDTDVESLSAVAILIVKGPPSPPDS 604

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V V EV  ++A + W+ G  NG PI +Y I  RT +   W  V  + + + +D   G   
Sbjct: 605 VTVEEVTDSTAQLAWSRGRDNGSPIANYFIQTRTPFTVGWQRV--NTVPEIID---GNTL 659

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            +    L  W  YEF+V+A N +G GEPS  S +  T    P  AP  +GGGGG   +L 
Sbjct: 660 TATVVDLNAWVEYEFRVLARNSVGVGEPSPVSVRTRTEDAVPDAAPGDVGGGGGSRSELV 719

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+WEP+P E QN  +  Y I +R   +  +        G     V R  S   ++ + VK
Sbjct: 720 ITWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSAPG-ASRYVYRNDSIAPFSPFHVK 778

Query: 964 VQAINDVGPGPESEV 978
           V   N  G GP S V
Sbjct: 779 VGTYNSKGQGPFSPV 793


>gi|50511265|dbj|BAD32618.1| mKIAA3024 protein [Mus musculus]
          Length = 898

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 227/668 (33%), Positives = 329/668 (49%), Gaps = 24/668 (3%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY+C V
Sbjct: 11  GMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNYTCVV 68

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
            + V++    GP  PL +       +   K    FP+T P   + G  V+LEC A G PV
Sbjct: 69  TNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFALGNPV 126

Query: 429 PSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           P+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   ++  A
Sbjct: 127 PTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYA 186

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           +PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  +DR  I+  
Sbjct: 187 QPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQG 239

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            L I  +N   D  MYQC A+N+    +SSA+L V+   P F +  L+  T    GG V 
Sbjct: 240 TLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVV 298

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
           I C P+A+P+P + W+K   I+    R  I E+GNL I  V++ D+G Y+C ATN  G  
Sbjct: 299 IECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTA 358

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMD 726
            S G +IV   P+     P  + +    ++ L C    +  LD+ + WT NG  I  + D
Sbjct: 359 SSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKD 417

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
            +  E        G L I N     AG+Y C+V+++V K+S    +IV GPPG P  V +
Sbjct: 418 GDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTI 477

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            E+  T+A + W  G  N  PIT Y I ART ++  W       +    D   G+   + 
Sbjct: 478 DEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGKTFTAT 532

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              L PW  YEF+ +A N +G GEPS PS +  T    P   P+ + GGGG   +L I+W
Sbjct: 533 VVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITW 592

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           E +P E QN     Y + +R      +    L    +    V R  S   ++ +EVKV  
Sbjct: 593 ETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGV 651

Query: 967 INDVGPGP 974
            N+ G GP
Sbjct: 652 FNNKGEGP 659



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 148/649 (22%), Positives = 239/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG+Y C  ++     G+N     L  +   N+ Q+   N+      E
Sbjct: 149 NGILEIPNFQQEDAGSYECVAEN---SRGKNVAKGQLTFYAQPNWVQII--NDIHVAMEE 203

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           +      V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 204 S------VFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 257

Query: 470 ASNDRSALESSVTISIQAE-PNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ AE P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 258 AENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGR 317

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           E+L        + +R  I ++   +R +N  + D   Y C A N   T  S+    V+  
Sbjct: 318 EIL-------RENERITISED-GNLRIINVTKSDAGSYTCIATNHFGTASSTGN--VIVK 367

Query: 586 KPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---- 640
            P+    P  S +   GE   +      + +    F W  +G++I        FE     
Sbjct: 368 DPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQ 427

Query: 641 ---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
              G+L+I  +    +G Y C              LIV   P   E +           L
Sbjct: 428 DSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQL 487

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE- 756
             R        + +  I       +G   +N +  P++ +DG     T        EYE 
Sbjct: 488 SWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PDL-VDGKTFTATVVGLNPWVEYEF 544

Query: 757 -CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP 807
             V  + +G     + S K       P   P  V      K+   I W    +   NGR 
Sbjct: 545 RTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRG 604

Query: 808 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
              Y +  R +    W      +   +  RY  R E+     + P+S +E KV   N  G
Sbjct: 605 F-GYVVAFRPHGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKG 656

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            G P SP+    +  ++P + P+ I        D+ + W     + +     Y   +WR 
Sbjct: 657 EG-PFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPIGKNRGRIQGYEVKYWRH 715

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +D E  ++ ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 716 -DDKEENAKKIRTVGNQ--TSTKITNLKGSALYHLSVKAYNSAGTGPSS 761



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 133/330 (40%), Gaps = 62/330 (18%)

Query: 208 ILNDITLS--------CYAGGYPNPSYEWFKEDYVQDRLVANLIDP-LSDKRFTLSGGNL 258
           I+NDI ++        C A G P P+Y W K             DP L+  R  +  G L
Sbjct: 193 IINDIHVAMEESVFWECKANGRPKPTYRWLKNG-----------DPLLTRDRIQIEQGTL 241

Query: 259 ---IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWG 312
              I+N    + D G Y C A NK G I S +         +F+   LKR   +  +  G
Sbjct: 242 NITIVN----LSDAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLV--KVGG 295

Query: 313 KAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---N 369
           + +    P   P   Y W +      + E++R+ +S DG L    + + DAG+Y+C   N
Sbjct: 296 EVVIECKPKASPRPVYTWRKGR--EILRENERITISEDGNLRIINVTKSDAGSYTCIATN 353

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPV 428
                S TG      P KV        +  P++   T       G+ + L C V   + +
Sbjct: 354 HFGTASSTGNVIVKDPTKV--------MVPPSSMDVTV------GESIVLPCQVTHDHSL 399

Query: 429 P-SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALES 479
              + WT  G  +  +   ++F R+        L I N++++  G+Y+C        L  
Sbjct: 400 DIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSV 459

Query: 480 SVTISIQAEPNFTIPLT-DKHMDNQADLTW 508
           +  + ++  P     +T D+  D  A L+W
Sbjct: 460 AADLIVRGPPGPPEAVTIDEITDTTAQLSW 489



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 131/330 (39%), Gaps = 42/330 (12%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 115 VKLECFALGNPVPTILWRRADG----------KPIARKARRHKSNGILEIPNFQQ-EDAG 163

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTN-YPGVNYY 329
           SY C A N  G  +++  QL   F  + N  +     +    +++F +   N  P   Y 
Sbjct: 164 SYECVAENSRGKNVAKG-QLT--FYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYR 220

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++  P    +  ++     G L  + +   DAG Y C  ++K              +F
Sbjct: 221 WLKNGDPLLTRDRIQI---EQGTLNITIVNLSDAGMYQCVAENKHG-----------VIF 266

Query: 390 PHSNFQQLKFPNNFPKTFPE---APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN--- 443
             +    +    +F +T  +     K G +V +EC     P P Y W R+G  + R    
Sbjct: 267 SSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTW-RKGREILRENER 325

Query: 444 -AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
               E+ N  L I NV   D G Y C A+N      S+  + ++      +P +   +  
Sbjct: 326 ITISEDGN--LRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTV 383

Query: 503 QADLTWTCEAF--GVPDVTYSWFRNGELLN 530
              +   C+       D+ ++W  NG L++
Sbjct: 384 GESIVLPCQVTHDHSLDIVFTWTFNGHLID 413


>gi|18858449|ref|NP_571521.1| contactin-2 precursor [Danio rerio]
 gi|4867989|gb|AAD31083.1|AF064799_1 transiently expressed axonal glycoprotein [Danio rerio]
          Length = 1040

 Score =  358 bits (919), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 260/804 (32%), Positives = 384/804 (47%), Gaps = 47/804 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP+ +++          +TL C A   P   Y W        R+    I    +
Sbjct: 33  GPVFEEQPSSLIYPEGMPE--GKVTLGCQARSSPAAVYRW--------RVNGTDISFAEE 82

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
             +T   GNL+IN+P+   D GSY C A N+ G+I+S    L FG++ +F  + R+P+  
Sbjct: 83  SHYTQVAGNLVINNPQNGRDGGSYQCLAINRCGTIVSRVANLKFGYLRDFPPESRSPQTV 142

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE-EDKRVFVS-YDGALYFSALEQIDAGN 365
           ++  G  + C PP +YP ++Y W  + FPNF++ E  R FVS   G LY +     D GN
Sbjct: 143 HEGMGTFLACQPPAHYPALSYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGN 202

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVA 423
           Y C     +  + ++     +++  H +    K   N    FP    A  G   +LEC A
Sbjct: 203 YFCFTTINMDVSTKSIFSKAVQLTVHPDASPRKTAPNIRVRFPAETYALSGQTAQLECFA 262

Query: 424 FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           +  P+P   W +    LP          IL IP +  +D+G Y C   N          +
Sbjct: 263 YRNPIPKIRWRKVDGILPPKVGTSVDGPILIIPELNFDDEGMYECEVYNSEGRETHQGRV 322

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           S+QA+P++   ++D  ++  ++L W+C A G P  T  W RNG  L +       QDR  
Sbjct: 323 SVQAQPDWLQVMSDSEVEISSELQWSCAAAGKPRPTIRWLRNGHALIT-------QDRVE 375

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           + +  L I  L  E D  MYQC A+N+  T YS+A+LRV    P F+  P+     A  G
Sbjct: 376 VNNGRLKIANLALE-DSGMYQCVAENKHSTIYSNAELRVQVQAPDFRLNPVRKLVPAARG 434

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V + C P AAPKP   W +   ++ +  R  +  +G L I  +SR D G Y+C A N 
Sbjct: 435 GQVKMECKPRAAPKPTLFWSRGTELLTNSTRITVTPDGILWIYNISRADEGKYTCFAENY 494

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L V    +     P    I    N  L+C A  +  +D+ + W+ NGV + 
Sbjct: 495 LGKANSTGHLSVRDA-TKITLAPSNADINQGENATLQCHASHDPTMDLTFTWSLNGVPL- 552

Query: 724 NMDLNELETPNIN---IDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
                +LE PN +   ++G    G L I N   + AG Y C  ++ V        ++V G
Sbjct: 553 -----DLEEPNGHYRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKLVVRG 607

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
           PPG PGG+ V  V+ TS  ++W+ G  N  PI  Y I+ R++    W  +       E  
Sbjct: 608 PPGPPGGLVVTSVNDTSVELRWSRGYDNHSPIGKYVILGRSSQTHDWKRMRTDPANIE-- 665

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
              G  E++    L PW  YEF+VIA N LG GEPS PSP+  T    P  APS +GGGG
Sbjct: 666 ---GNAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLGGGG 722

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA--VVRIPSE 954
           G   +L I+W P+ RE QN  +  Y + +RK+      + T+ +  NV  +  V    S 
Sbjct: 723 GNRNELIITWTPMAREYQNGDSFGYILAFRKQG---IPTWTVVKVPNVESSRYVYSNDSL 779

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
             Y  +EV+++A N  G GP S++
Sbjct: 780 TAYCPFEVRIKAYNKKGEGPFSQI 803



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 185/802 (23%), Positives = 292/802 (36%), Gaps = 103/802 (12%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY WF  ++       N I P + + F +   GNL + + R   D G+Y C  +  
Sbjct: 158 YPALSYRWFINEF------PNFIQPEAGRWFVSQVTGNLYLANAR-ANDTGNYFCFTTIN 210

Query: 280 FG----SIISESVQLAFGFIGEFNLKRAPEI---------GNQNWGKAMFCDPPTN-YPG 325
                 SI S++VQL          K AP I                 + C    N  P 
Sbjct: 211 MDVSTKSIFSKAVQLTV-HPDASPRKTAPNIRVRFPAETYALSGQTAQLECFAYRNPIPK 269

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDG-ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           + +       P       +V  S DG  L    L   D G Y C V    +  GR     
Sbjct: 270 IRWRKVDGILP------PKVGTSVDGPILIIPELNFDDEGMYECEV---YNSEGRETHQG 320

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
            + V    ++ Q+   +          +   +++  C A G P P+  W R G  L    
Sbjct: 321 RVSVQAQPDWLQVMSDSEV--------EISSELQWSCAAAGKPRPTIRWLRNGHALITQD 372

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHM--D 501
             E  N  L I N+ +ED G Y C A N  S + S+  + +Q + P+F +    K +   
Sbjct: 373 RVEVNNGRLKIANLALEDSGMYQCVAENKHSTIYSNAELRVQVQAPDFRLNPVRKLVPAA 432

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
               +   C+    P  T  W R  ELL + T       R  +  + +   Y     D  
Sbjct: 433 RGGQVKMECKPRAAPKPTLFWSRGTELLTNST-------RITVTPDGILWIYNISRADEG 485

Query: 562 MYQCRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 616
            Y C A+N L    S+  L V     +TL PS             +G N T+ C+    P
Sbjct: 486 KYTCFAENYLGKANSTGHLSVRDATKITLAPS--------NADINQGENATLQCHASHDP 537

Query: 617 KP--KFVWKKDG---NIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMD 667
                F W  +G   ++    G  +  E     G+L+I       +G Y+CTA  V    
Sbjct: 538 TMDLTFTWSLNGVPLDLEEPNGHYRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSA 597

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 727
            +  +L+V   P     L   +T     +++LR S   +    +   +   G      D 
Sbjct: 598 MASAKLVVRGPPGPPGGL--VVTSVNDTSVELRWSRGYDNHSPIGK-YVILGRSSQTHDW 654

Query: 728 NELETPNINIDGGLLEITNASFADAG-----EYECVVKSTVGK-----ISTKTTVIVEGP 777
             + T   NI+G      +A   D       E++ +  + +G       S +       P
Sbjct: 655 KRMRTDPANIEG---NAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAP 711

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
              P G+     ++    I WT  A    NG     Y +  R     TW  V   V   E
Sbjct: 712 TVAPSGLGGGGGNRNELIITWTPMAREYQNGDSFG-YILAFRKQGIPTWTVVK--VPNVE 768

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
             RY    ++     L  +  +E ++ A N+ G G P S     ++  ++P  +P  I  
Sbjct: 769 SSRYVYSNDS-----LTAYCPFEVRIKAYNKKGEG-PFSQIAVVHSAEEEPTVSPRWINA 822

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
                 ++ +SWEP+     N     Y+I + ++++ E  ++ ++  G    A  R+   
Sbjct: 823 TALTAFEIQVSWEPIQHLNINGVLRGYEIRYWRQHEREAAADRVRTAGLENTA--RVTGL 880

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
              T Y + V A N  G GP S
Sbjct: 881 RPNTLYHITVLAYNSAGTGPAS 902


>gi|327266146|ref|XP_003217867.1| PREDICTED: contactin-3-like [Anolis carolinensis]
          Length = 920

 Score =  355 bits (912), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 224/672 (33%), Positives = 333/672 (49%), Gaps = 23/672 (3%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C PPT+Y   +Y W  + +P+FV+ED R FVS + G LY + +E  D GNY+C V
Sbjct: 32  GVVLLCGPPTHYGEFSYAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVESSDVGNYTCVV 91

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
            S V+++   G   PL +       +   K    FP+T P A   G  V+LEC A G PV
Sbjct: 92  TSTVTNSHSLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFALGNPV 149

Query: 429 PSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           P  NW R  G+P P        N ++ IPN + ED G Y C   N R    +   ++  A
Sbjct: 150 PRINWRRTDGNPFPSKVMLRKSNGMIEIPNFQQEDAGLYECITENSRGKNIARGRLTYYA 209

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           +P++   + D     + +L W C A G P  +Y W +NG+       PL  + R  I++ 
Sbjct: 210 KPHWVQLIKDFEAAVEDNLYWECRASGKPKPSYRWLKNGD-------PLTIEGRIQIENG 262

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            L I  LN   D  +YQC A+N+  T YSSA LRV+   P F K P++       G    
Sbjct: 263 ALIITNLN-LTDSGIYQCVAENKHGTIYSSADLRVVASAPDFSKNPMKKLLQLLMGSTAH 321

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
             C P+A+P+    WKK G ++    R  + ++G L I+ VS+ D+G Y+C A N  G  
Sbjct: 322 FECKPKASPRAMITWKKGGELLQENERISLLKDGGLRIANVSKSDAGSYTCLAENQFGKA 381

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMD 726
            S   L+V   P+     P  + +    ++ L C    + LLDV++ W  N        D
Sbjct: 382 SSSTSLLVTE-PTRITLAPSNMDVTVGESVILPCQVQHDPLLDVSFTWYFNSALTDFRKD 440

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
            +  E    +  G L+ I N     +G+Y C VK+ V  +S+   +IV G PG P  V+V
Sbjct: 441 ASHFERVGGSASGDLM-IRNIQLKHSGKYVCTVKTEVDSVSSAAELIVRGSPGPPENVKV 499

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            E+  T+A + W +G  N  P+T Y + ART ++  W  V+   + + +D   G+   + 
Sbjct: 500 DEITATTAWLSWYEGLDNHSPVTGYTVQARTPFSVGWQRVT--TVPEVID---GKTFTAT 554

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              L PW  YEF+++A N++G GEPS PS +  T    P   PS + GGGG   +L I+W
Sbjct: 555 AVDLNPWVEYEFRIVASNKIGGGEPSLPSEKVRTKEAVPEVPPSEVSGGGGSRSELVITW 614

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           +P+P E QN     Y + +R    + +  +T+    +    V R  S   ++ YEVKV  
Sbjct: 615 DPVPEELQNGEGFGYVVAFRPLGVSTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGV 673

Query: 967 INDVGPGPESEV 978
            N+ G GP S V
Sbjct: 674 YNNKGEGPFSSV 685



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 163/663 (24%), Positives = 245/663 (36%), Gaps = 74/663 (11%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
            K +    +G +     +Q DAG Y C  ++     G+N     L  +   ++ QL    
Sbjct: 164 SKVMLRKSNGMIEIPNFQQEDAGLYECITEN---SRGKNIARGRLTYYAKPHWVQLI--- 217

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVE 461
              K F  A +  D +  EC A G P PSY W + G PL      +  N  L I N+ + 
Sbjct: 218 ---KDFEAAVE--DNLYWECRASGKPKPSYRWLKNGDPLTIEGRIQIENGALIITNLNLT 272

Query: 462 DQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQADLT--WTCEAFGVPDV 518
           D G Y C A N    + SS  + + A  P+F+     K +      T  + C+    P  
Sbjct: 273 DSGIYQCVAENKHGTIYSSADLRVVASAPDFSKNPMKKLLQLLMGSTAHFECKPKASPRA 332

Query: 519 TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 578
             +W + GELL       E++    ++D  L I  ++ + D   Y C A+NQ     SS 
Sbjct: 333 MITWKKGGELLQ------ENERISLLKDGGLRIANVS-KSDAGSYTCLAENQFGKASSST 385

Query: 579 QLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGS 631
            L V     +TL PS        +   GE  +V + C  +  P     F W  +  +   
Sbjct: 386 SLLVTEPTRITLAPS------NMDVTVGE--SVILPCQVQHDPLLDVSFTWYFNSALTDF 437

Query: 632 GGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 685
                 FE      +G+L+I  +    SG Y CT         S   LIV   P   E +
Sbjct: 438 RKDASHFERVGGSASGDLMIRNIQLKHSGKYVCTVKTEVDSVSSAAELIVRGSPGPPENV 497

Query: 686 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 745
                 A    L           +    +       +G   +  +  P + IDG     T
Sbjct: 498 KVDEITATTAWLSWYEGLDNHSPVTGYTVQARTPFSVGWQRVTTV--PEV-IDGKTFTAT 554

Query: 746 NASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 794
                   EYE   V  + +G         K+ TK  V    P  + GG       ++  
Sbjct: 555 AVDLNPWVEYEFRIVASNKIGGGEPSLPSEKVRTKEAVPEVPPSEVSGGGG----SRSEL 610

Query: 795 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 851
            I W    +   NG     Y +  R    STW  +   V   +  RY  R E+     ++
Sbjct: 611 VITWDPVPEELQNGEGF-GYVVAFRPLGVSTW--IQTVVTSPDTPRYVFRNES-----IL 662

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P+S YE KV   N  G G  SS +  Y+   ++P  APS +         + +SW  +P 
Sbjct: 663 PFSPYEVKVGVYNNKGEGPFSSVATVYSA-EEEPTVAPSGVAASSLSSSVIEVSWISIPW 721

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  +   + Y++ +      E  S  +K  GN     VRI        Y   V+A N  G
Sbjct: 722 KMSSGRLLGYEVRYWNNGGKEQSSNRVKAIGNE--TSVRITGLKSNLVYFTAVRAYNSAG 779

Query: 972 PGP 974
            GP
Sbjct: 780 AGP 782



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 36/294 (12%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS-DKRFTLSGGNLIINDPRQ 265
           ++ +++   C A G P PSY W K             DPL+ + R  +  G LII +   
Sbjct: 223 AVEDNLYWECRASGKPKPSYRWLKNG-----------DPLTIEGRIQIENGALIITN-LN 270

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGK-AMFCDPPTNYP 324
           + D G Y C A NK G+I S +         +F+     ++     G  A F   P   P
Sbjct: 271 LTDSGIYQCVAENKHGTIYSSADLRVVASAPDFSKNPMKKLLQLLMGSTAHFECKPKASP 330

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
                W +      ++E++R+ +  DG L  + + + DAG+Y+C  +++    G+     
Sbjct: 331 RAMITWKKG--GELLQENERISLLKDGGLRIANVSKSDAGSYTCLAENQF---GKASSST 385

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPR 442
            L V   +       P+N   T       G+ V L C     P+   S+ W    +    
Sbjct: 386 SLLVTEPTRITLA--PSNMDVT------VGESVILPCQVQHDPLLDVSFTWYFNSALTDF 437

Query: 443 NAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
                +F R+       L I N++++  G+Y+C    +  ++ S+  + ++  P
Sbjct: 438 RKDASHFERVGGSASGDLMIRNIQLKHSGKYVCTVKTEVDSVSSAAELIVRGSP 491



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 132/381 (34%), Gaps = 41/381 (10%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVEDRG 270
           + L C+A G P P   W + D           +P   K   L   N +I  P  Q ED G
Sbjct: 138 VKLECFALGNPVPRINWRRTDG----------NPFPSK-VMLRKSNGMIEIPNFQQEDAG 186

Query: 271 SYHCKASNKFGSIISESVQLAFG------FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP 324
            Y C   N  G  I+      +        I +F    A    N  W     C   +  P
Sbjct: 187 LYECITENSRGKNIARGRLTYYAKPHWVQLIKDF---EAAVEDNLYWE----CR-ASGKP 238

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
             +Y W ++  P  +E   ++    +GAL  + L   D+G Y C  ++K      +    
Sbjct: 239 KPSYRWLKNGDPLTIEGRIQI---ENGALIITNLNLTDSGIYQCVAENKHGTIYSSADLR 295

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
            +   P        F  N  K   +    G     EC     P     W + G  L  N 
Sbjct: 296 VVASAP-------DFSKNPMKKLLQL-LMGSTAHFECKPKASPRAMITWKKGGELLQENE 347

Query: 445 YFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
                 +  L I NV   D G Y C A N      SS ++ +      T+  ++  +   
Sbjct: 348 RISLLKDGGLRIANVSKSDAGSYTCLAENQFGKASSSTSLLVTEPTRITLAPSNMDVTVG 407

Query: 504 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             +   C+    P  DV+++W+ N  L +        +         L IR +  +    
Sbjct: 408 ESVILPCQVQHDPLLDVSFTWYFNSALTDFRKDASHFERVGGSASGDLMIRNIQLKHS-G 466

Query: 562 MYQCRAKNQLKTRYSSAQLRV 582
            Y C  K ++ +  S+A+L V
Sbjct: 467 KYVCTVKTEVDSVSSAAELIV 487


>gi|317418924|emb|CBN80962.1| Contactin-4, partial [Dicentrarchus labrax]
          Length = 944

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 224/680 (32%), Positives = 326/680 (47%), Gaps = 30/680 (4%)

Query: 237 RLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 296
           +L    I P S   ++LSGGNL I+   + +D G+Y C ASN FG+I+S    L F ++ 
Sbjct: 2   KLNGTEISPKSGSHYSLSGGNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTFAYLE 61

Query: 297 EFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALY 354
            F   R   +   +  G  + C PP +   + + W  + +P FV++D R F+S + G LY
Sbjct: 62  NFKTHRRSSVSVREGQGVVLLCGPPPHSGDLVFSWIFNEYPTFVKQDTRRFISQETGNLY 121

Query: 355 FSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA- 413
            + +E  D GNY+C V + V+ T   GP  PL +   S+    ++       FPE     
Sbjct: 122 IAMVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVL--RSDGVMGEYEPKIEVQFPEIVHVA 179

Query: 414 -GDKVRLECVAFGYPVPSYNWTRRGS-PLPRNAYFENFNRILTIPNVKVEDQGEYICRAS 471
            G  V+LEC A G PVPS NW R  S P PR       + +L IP  + ED G Y C A 
Sbjct: 180 KGSTVKLECFALGNPVPSINWRRMDSIPFPRKVDMRKASGVLEIPYFQQEDAGTYECVAE 239

Query: 472 NDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
           N R        +S  A P+      D        L W C+A G P  +Y W +NGE L S
Sbjct: 240 NSRGMNTVKGKLSFYAPPHLIEKPQDVQKLIDESLVWECKATGKPKPSYRWMKNGENLES 299

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                  ++R  + +  L+I  L    D  MYQC A N+    YS+A+LRV+ + P F  
Sbjct: 300 A------EERVQVANGALSISRLTLS-DTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSH 352

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 651
             + S+T    GG+  I C P+ +P     W+K    +    R  I +NGNL I   ++ 
Sbjct: 353 NQVRSQTLVKVGGDALIECKPKMSPWGVVSWRKGSEPLRESNRVSILDNGNLRIWNATKP 412

Query: 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
           D+G+Y+C A N  G+  S G + V   P+    LP  + +    ++ L C    +  L++
Sbjct: 413 DAGLYTCVARNQFGVASSTGSITVKE-PTIITTLPSTLDVTVGESVVLPCQVSHDPSLEL 471

Query: 712 AYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769
            + W  N   +  G+      E        G + I N     AG+Y C V++ V  IS  
Sbjct: 472 KFTWFFNEQVIHFGSHG-GFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIA 530

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE- 828
             ++V   PG P  + V E+  T+A++ W  G  N  PIT Y I ART ++  W  V+  
Sbjct: 531 VDLVV---PGAPTSIHVEEITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTV 587

Query: 829 -HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             V+G        R  A++ + L PW  YEF+V+A N +G GEPS PS Q  T    P  
Sbjct: 588 PEVVGGH------RLTATVID-LSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTSPKV 640

Query: 888 APSRIGGGGGKIGDLSISWE 907
            P+ + GGGG   +L I+WE
Sbjct: 641 TPANVSGGGGSRSELVITWE 660



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 135/330 (40%), Gaps = 37/330 (11%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P PS  W + D +          P   ++  +   + ++  P  Q ED
Sbjct: 182 STVKLECFALGNPVPSINWRRMDSI----------PF-PRKVDMRKASGVLEIPYFQQED 230

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVN 327
            G+Y C A N  G     +V+    F    +L   P+   +   +++  +   T  P  +
Sbjct: 231 AGTYECVAENSRG---MNTVKGKLSFYAPPHLIEKPQDVQKLIDESLVWECKATGKPKPS 287

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
           Y W ++   N    ++RV V+ +GAL  S L   D G Y C   +K  +   N     + 
Sbjct: 288 YRWMKN-GENLESAEERVQVA-NGALSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIA 345

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP---RNA 444
           V P  +  Q++             K G    +EC     P    +W +   PL    R +
Sbjct: 346 VAPDFSHNQVRSQTLV--------KVGGDALIECKPKMSPWGVVSWRKGSEPLRESNRVS 397

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF--TIPLTDKHMDN 502
             +N N  L I N    D G Y C A N      S+ +I+++ EP    T+P T      
Sbjct: 398 ILDNGN--LRIWNATKPDAGLYTCVARNQFGVASSTGSITVK-EPTIITTLPSTLDVTVG 454

Query: 503 QADLTWTCEAFGVP--DVTYSWFRNGELLN 530
           ++ +   C+    P  ++ ++WF N ++++
Sbjct: 455 ES-VVLPCQVSHDPSLELKFTWFFNEQVIH 483



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 123/336 (36%), Gaps = 53/336 (15%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYVQDRL-VANLID 244
           P+ I++P DV     ++ I   +   C A G P PSY W K     +  ++R+ VAN   
Sbjct: 257 PHLIEKPQDV-----QKLIDESLVWECKATGKPKPSYRWMKNGENLESAEERVQVAN--G 309

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF--NLKR 302
            LS  R TLS             D G Y C A NK G + S +         +F  N  R
Sbjct: 310 ALSISRLTLS-------------DTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQVR 356

Query: 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQID 362
           +  +        + C P  +  GV   W +   P  + E  RV +  +G L      + D
Sbjct: 357 SQTLVKVGGDALIECKPKMSPWGV-VSWRKGSEP--LRESNRVSILDNGNLRIWNATKPD 413

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECV 422
           AG Y+C  +++       G             ++       P T       G+ V L C 
Sbjct: 414 AGLYTCVARNQFGVASSTGSI---------TVKEPTIITTLPSTLDVT--VGESVVLPCQ 462

Query: 423 AFGYPV--PSYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASN 472
               P     + W      +   ++   F ++        + I N+++   G+Y C    
Sbjct: 463 VSHDPSLELKFTWFFNEQVIHFGSHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQT 522

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTW 508
              ++  +V + +   P  T    ++  D  A L+W
Sbjct: 523 KVDSISIAVDLVVPGAP--TSIHVEEITDTTASLSW 556


>gi|444706384|gb|ELW47726.1| Contactin-2 [Tupaia chinensis]
          Length = 1019

 Score =  352 bits (904), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 272/814 (33%), Positives = 376/814 (46%), Gaps = 96/814 (11%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S    +TL+C A   P  SY W        R+    +     
Sbjct: 36  GPVFEDQPLSLLF--PEESTEEQVTLACRARASPPASYRW--------RMNGTEMKLEPG 85

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 86  SRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 313

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                  I +QA+P +   ++D   D  A+L W C A G P  T  W RNGE       P
Sbjct: 314 RDTVQGRIIVQAQPEWLKVISDMEADIGANLHWGCAAAGKPRPTVRWLRNGE-------P 366

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           L  Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+ 
Sbjct: 367 LASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVR 425

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 655
               A  GG V I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G 
Sbjct: 426 RLIPAARGGEVVIPCEPRAAPKAIVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGK 485

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   S G ++ +   +     P    I    NL L+C A  +  +D+ + W
Sbjct: 486 YTCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTW 544

Query: 716 THNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           T +   I  +         ++    G L I NA     G+Y C+ ++ V   + + TV+V
Sbjct: 545 TLDDFPIDFDKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSAAKEATVLV 604

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E
Sbjct: 605 RGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTLPAGKWKQVRTNPANIE 664

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + G
Sbjct: 665 -----GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSG 719

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP-- 952
           GGG  G+L+I+W                                   G+ G    R+P  
Sbjct: 720 GGGAPGELTINWT----------------------------------GSAGWQTARVPGA 745

Query: 953 -SEFY---------YTEYEVKVQAINDVGPGPES 976
            ++++         YT +EVK+++ N  G GPES
Sbjct: 746 DAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPES 779



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 173/791 (21%), Positives = 286/791 (36%), Gaps = 107/791 (13%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY W   ++       N I P   + F + + GNL I       D G+Y C A++ 
Sbjct: 161 YPGLSYRWLLNEF------PNFI-PTDGRHFVSQTTGNLYIAR-TNASDLGNYSCLATSH 212

Query: 280 FG----SIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF 335
                 S+ S+  QL      E     AP I      KA F  P   Y  V      + F
Sbjct: 213 MDFSTKSVFSKFAQL--NLAAEDTRLFAPSI------KARF--PAETYALVGQQVTLECF 262

Query: 336 PNFVEEDKRV------------FVSYDGALYFSALEQIDAGNYSCNVQ-SKVSDTGRNGP 382
             F     R+            + + +  L   ++   D G Y C  + SK  DT +   
Sbjct: 263 -AFGNPVPRIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQG-- 319

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
               ++   +  + LK  ++           G  +   C A G P P+  W R G PL  
Sbjct: 320 ----RIIVQAQPEWLKVISDMEADI------GANLHWGCAAAGKPRPTVRWLRNGEPLAS 369

Query: 443 NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKHM- 500
               E     L    + +ED G Y C A N    + +S  +++QA  P+F +    + + 
Sbjct: 370 QNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIP 429

Query: 501 -DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
                ++   CE    P     W +  E+L      +         D  L IR ++   D
Sbjct: 430 AARGGEVVIPCEPRAAPKAIVLWSKGTEIL------VNSSRVTVTPDGTLIIRNIS-RSD 482

Query: 560 PAMYQCRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
              Y C A+N +    S+  L V     +TL PS     L        G N+T+ C+   
Sbjct: 483 EGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINL--------GDNLTLQCHASH 534

Query: 615 APKP--KFVWKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHG 665
            P     F W  D   I     G   RR   +   G+L I        G Y+C A  V  
Sbjct: 535 DPTMDLTFTWTLDDFPIDFDKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTV-- 592

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 725
           +D +     VL            +       +QL  S   +    +A  +T     +   
Sbjct: 593 VDSAAKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTLPAG 651

Query: 726 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 785
              ++ T   NI+G              +YE  V ++         ++  G P  P    
Sbjct: 652 KWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVLAS--------NILGTGEPSGPS--S 701

Query: 786 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   + + ++  +  +  G       I    NW  +    +  V G +   +    E+ 
Sbjct: 702 KIRTKEAAPSVAPSGLSGGGGAPGELTI----NWTGSAGWQTARVPGADAQYFVYSNES- 756

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
               + P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++
Sbjct: 757 ----VRPYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPAKVWAKGVSSSEMNVT 811

Query: 906 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
           WEP  ++  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+
Sbjct: 812 WEP-GQQDTNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVR 868

Query: 966 AINDVGPGPES 976
           A N  G GP S
Sbjct: 869 AYNRAGTGPAS 879


>gi|345307132|ref|XP_001507473.2| PREDICTED: contactin-2-like [Ornithorhynchus anatinus]
          Length = 1377

 Score =  352 bits (903), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 277/816 (33%), Positives = 382/816 (46%), Gaps = 71/816 (8%)

Query: 189  GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            GP F  QP   +F    R     +TL+C A   P  +Y W K +  + +L  N       
Sbjct: 275  GPIFEDQPISALFPEESRE--EKVTLACRARASPPATYRW-KMNGTEMKLEPN------- 324

Query: 249  KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
             R+ L GGNL+I +P + ED G+Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 325  SRYQLVGGNLVITNPVKAEDAGAYQCLASNTLGTVVSREAFLRFGFLQEFSKEERDPVRI 384

Query: 308  NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE--------EDKRVFVS-YDGALYFSAL 358
             + WG  + C+PP +YPG    +    FP             D R FVS   G LY +  
Sbjct: 385  TEGWGVMLPCNPPAHYPGEKETFPILSFPFHSALXXXCGGFADGRHFVSQMTGNLYIART 444

Query: 359  EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----- 413
               D GNYSC   S +  T ++       VF  S F +L      P+ F  + KA     
Sbjct: 445  NASDLGNYSCLATSHMDFTTKS-------VF--SKFARLNLAAEDPRQFSPSIKARFPSE 495

Query: 414  -----GDKVRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYI 467
                 G +V LEC AFG PVP   W R  G+  P+ A  E     L I NV  ED+G Y 
Sbjct: 496  TYALAGQQVTLECFAFGNPVPRIKWRRVDGTLSPQWAEGEP---TLQIANVGFEDEGTYE 552

Query: 468  CRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
            C A N +        I +QA+P +   ++D   D  +DL WTC A G P  T  W RNG+
Sbjct: 553  CEAENTKGRDTVQGRIIVQAQPEWLKVISDTEADIGSDLRWTCAAAGKPRPTMRWLRNGD 612

Query: 528  LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
                   PL  Q R  +    L    L  + D  MYQC A+N+    Y+SA+L V  L P
Sbjct: 613  -------PLASQARLEVSGGELKFSKLALQ-DSGMYQCVAENKHGAIYASAELAVQALAP 664

Query: 588  SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP 647
             F+  P++    A  GG V I C P +AP+   +W K   ++ +  R  I  +G L++  
Sbjct: 665  DFRLNPVKRLIPAARGGEVIIPCQPRSAPRAVVLWSKGTELLTNSSRVTITLDGTLILRN 724

Query: 648  VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
            +SR D G Y+C A N  G   S G L V    +     P    +    NL L+C A  + 
Sbjct: 725  LSRSDEGKYTCFAENFMGKANSTGTLSVRDA-TKITLAPSSADVNLGENLTLQCHASHDP 783

Query: 708  LLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
             +D+ + WT +   I  +         +     G L I NA    AG+Y C+ ++ V   
Sbjct: 784  TMDLTFTWTLDDSPIDFDKPDGHYRRASAKEAIGDLTIVNAQLRHAGKYTCMAQTVVDSA 843

Query: 767  STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
            +   T+++ GPPG PGGV V ++  T+  + W+ G  N  PI  Y I ART     W  V
Sbjct: 844  AEAATLLIRGPPGPPGGVVVRDISDTTVQLSWSRGFDNHSPIAKYTIQARTLPAGQWKPV 903

Query: 827  SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
                +  E +  T R    + N L PW  YEF+V+A N LG GEPS PS +  T    P 
Sbjct: 904  RTEPVNIEGNAETAR----VLN-LTPWMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPS 958

Query: 887  QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE------FQSETLKE 940
             APS + GGGG  G+L I+W P+ RE QN     Y + +RK+   +      FQ+E+L  
Sbjct: 959  VAPSGLSGGGGAPGELIINWTPMLREYQNGDGFGYLLSFRKQGSVDWRTTRVFQAESLH- 1017

Query: 941  YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
                   V R  +   YT +EVK++  N  G GPES
Sbjct: 1018 ------YVYRNETIQPYTPFEVKIRGYNRKGEGPES 1047



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 3/128 (2%)

Query: 849  VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
             + P++ +E K+   N  G G P S +   ++  ++P  AP+++        ++ ++WEP
Sbjct: 1024 TIQPYTPFEVKIRGYNRKGEG-PESLTAIVHSAEEEPRVAPAKVTAKAALASEVDVTWEP 1082

Query: 909  LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 968
            + R   N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y + V+A N
Sbjct: 1083 VTRGDTNGVLLGYEIRYWKDGDKEAAADRVRTAGLDTTA--RVTGLHPSTKYHITVRAYN 1140

Query: 969  DVGPGPES 976
              G GP S
Sbjct: 1141 RAGTGPAS 1148


>gi|149036841|gb|EDL91459.1| rCG56294, isoform CRA_b [Rattus norvegicus]
          Length = 966

 Score =  352 bits (902), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 242/797 (30%), Positives = 362/797 (45%), Gaps = 87/797 (10%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDTSL 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           D R+ L+GGNLI+ +P +  D GSY C A+N  G+I+S   +L F ++  F  +    + 
Sbjct: 74  DHRYKLNGGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIELQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P P       FN +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGMPFPTKIKLRKFNGVLEIPNFQQEDTGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P +   L D     +  L W C A G P  +Y W +NG+ L  E       +R 
Sbjct: 312 LTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKPSYRWLKNGDALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+VL   P F + P++       
Sbjct: 365 QIENGALTIANLNVS-DSGMFQCIAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P+    WKK   ++    R  +  +G L I  V++ D+GIY+C A N
Sbjct: 424 GSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G      +L+V   P+     P  + +A   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTQLVVTE-PTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLT 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV  P  + 
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRVPEAID 601

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841
           G  +   V + +  +++            ++++A                          
Sbjct: 602 GKTRTATVVELNPWVEY-----------EFRVVASNK----------------------- 627

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
                              I G E     PS PS +  T    P  APS + GGGG   +
Sbjct: 628 -------------------IGGGE-----PSLPSEKVRTEEAAPEVAPSEVSGGGGSRSE 663

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
           L I+W+P+P E QN     Y + +R    T +    +    N    V R  S   ++ YE
Sbjct: 664 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 722

Query: 962 VKVQAINDVGPGPESEV 978
           VKV   N+ G GP S V
Sbjct: 723 VKVGVYNNKGEGPFSPV 739


>gi|432116103|gb|ELK37230.1| Contactin-2 [Myotis davidii]
          Length = 962

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 258/741 (34%), Positives = 355/741 (47%), Gaps = 45/741 (6%)

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGN 308
           R  L GGNL+I  P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   +
Sbjct: 13  RHQLVGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKAH 72

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
             WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNYS
Sbjct: 73  AGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYS 132

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDKV 417
           C   S +        F    VF  S F QL      P+ F  + KA          G +V
Sbjct: 133 CLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPAETYALLGQQV 183

Query: 418 RLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC AFG       W +  GS  P+ A  E     L IP+V  ED+G Y C A N +  
Sbjct: 184 TLECFAFG----KIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKGR 236

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  + L W C A G P  T  W RNGE       PL
Sbjct: 237 DSVQGRIIVQAQPEWLKVISDMEADIGSSLRWGCAAAGKPRPTVRWLRNGE-------PL 289

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q R  +    L    L+ + D  MYQC A+N+  T Y+SA+L V  L P F+  P+  
Sbjct: 290 ASQTRVEVLAGDLRFSKLSLD-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRR 348

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
              A  GG V I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y
Sbjct: 349 LIPAARGGEVMIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKY 408

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  G   S G ++ +   +     P    I    NL L+C A  +  +++ +IW 
Sbjct: 409 TCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMELTFIWA 467

Query: 717 HNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +   I  +         +     G L I NA     G+Y C+ ++ V   S + TV+V 
Sbjct: 468 LDDFPIDPDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVR 527

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG PGG+ V ++  T+  + W+ G  N  PI  Y + ART     W  V  +    E 
Sbjct: 528 GPPGPPGGMVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE- 586

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
               G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P+ APS + GG
Sbjct: 587 ----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPFVAPSGLSGG 642

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG  G+L ++W P+ RE QN     Y + +R++    +QS  +    +    V    S  
Sbjct: 643 GGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSAGWQSARVPG-ADAQFFVYSNESIR 701

Query: 956 YYTEYEVKVQAINDVGPGPES 976
            YT +EVK+++ N  G GPES
Sbjct: 702 PYTPFEVKIRSYNRRGDGPES 722



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 108/268 (40%), Gaps = 37/268 (13%)

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS-SAQLRVLTLKP 587
           +N   + LE   R+ +    L I      +D  +YQC A N + T  S  A LR   L+ 
Sbjct: 1   MNGTEMKLEPGSRHQLVGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQE 60

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFE-NGNL 643
             K+     + +AG G  V + CNP A  P   + W  +   N I + GR  + +  GNL
Sbjct: 61  FSKEERDPVKAHAGWG--VMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNL 118

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIV-------------LHGPSYYEQLPPKIT 690
            I+  +  D G YSC AT+   MD S   +               L  PS   + P +  
Sbjct: 119 YIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETY 176

Query: 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 750
               + + L C A                 +I    ++   +P        L+I + SF 
Sbjct: 177 ALLGQQVTLECFAFG---------------KIKWRKVDGSLSPQWATAEPTLQIPSVSFE 221

Query: 751 DAGEYECVVKSTVGKISTKTTVIVEGPP 778
           D G YEC  +++ G+ S +  +IV+  P
Sbjct: 222 DEGTYECEAENSKGRDSVQGRIIVQAQP 249



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 81/380 (21%), Positives = 139/380 (36%), Gaps = 50/380 (13%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIK-QP--TDVVFDLSKR 206
           + P     E ++Q       D+ TY+   +        +G   ++ QP    V+ D+ + 
Sbjct: 202 LSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDSVQGRIIVQAQPEWLKVISDM-EA 260

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL-SDKRFTLSGGNLIINDPRQ 265
            I + +   C A G P P+  W +             +PL S  R  +  G+L  +    
Sbjct: 261 DIGSSLRWGCAAAGKPRPTVRWLRNG-----------EPLASQTRVEVLAGDLRFSK-LS 308

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE-IGNQNWGKAMFCDPPTNYP 324
           ++D G Y C A NK G+I + +         +F L      I     G+ M    P   P
Sbjct: 309 LDDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEVMIPCQPRAAP 368

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNG 381
                W++      +    RV V+ DG L    + + D G Y+C   N   K + TG   
Sbjct: 369 KAVVLWSKGT--EILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILS 426

Query: 382 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRRGSP 439
                K+    +   +                GD + L+C A   P    ++ W     P
Sbjct: 427 VRDATKITLAPSSADINL--------------GDNLTLQCHASHDPTMELTFIWALDDFP 472

Query: 440 LPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASN--DRSALESSVTISIQAEP 489
           +  +    ++ R         LTI N ++   G+Y C A    D ++ E++V +     P
Sbjct: 473 IDPDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGP 532

Query: 490 NFTIPLTDKHMDNQADLTWT 509
              + + D   D    L+W+
Sbjct: 533 PGGMVVRDIG-DTTVQLSWS 551



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WE +P+
Sbjct: 702 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEAVPQ 760

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 761 DT-NGVLLGYEIRYWKAGDKEAAADRVRTAGLDTTA--RVTDLHPNTKYHVTVRAYNRAG 817

Query: 972 PGPES 976
            GP S
Sbjct: 818 TGPAS 822


>gi|449283519|gb|EMC90135.1| Contactin-3, partial [Columba livia]
          Length = 908

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 225/672 (33%), Positives = 330/672 (49%), Gaps = 23/672 (3%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C PP     +++ W  + +P+FV+ED R FVS + G LY + ++  D GNY+C V
Sbjct: 19  GVVLLCGPPPRAGDLSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVDPSDVGNYTCVV 78

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
            S V+++   G   PL +       +   K    FP+T P A   G  V+LEC A G PV
Sbjct: 79  TSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFALGNPV 136

Query: 429 PSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           P  NW R  G P P        N ++ IPN + ED G Y C   N R    +   ++  A
Sbjct: 137 PQINWRRTDGLPFPSKIKLRKSNGMIEIPNFQQEDAGLYECITENSRGKNIARGRLTYYA 196

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           +P++   + D  +  +  L W C A G P  +Y W +NGE L+ E        R  I++ 
Sbjct: 197 KPHWIQTIKDTEVAVEDTLYWDCRASGKPKPSYRWVKNGEQLSVE-------GRIQIENG 249

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            LTI  LN   D   YQC A+N+    YSSA+LRV+   P F K P++       G  V 
Sbjct: 250 ALTISNLN-LTDSGRYQCIAENKHGVIYSSAELRVVASAPDFSKNPMKKLIQVQIGSTVD 308

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
             C P+A+PK K  WKK G  +    R  + ++G L I+ V++ D+G Y+C ATN  G  
Sbjct: 309 FECKPKASPKAKCSWKKGGEQLHENERITLLKDGGLRIANVTKVDAGSYTCLATNQFGTA 368

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMD 726
                LIV   P+     P  + +    ++ L C    + +LD+++ W  NG       D
Sbjct: 369 SGSTNLIVTE-PTRIILAPSSMDVTVGESVVLPCQVQHDPILDISFTWYFNGTLTDFKKD 427

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
            +  E    +  G L+ I N     +G+Y C+VK+ V  +++   +IV G PG P  V+V
Sbjct: 428 ASHFEKVGGSASGDLM-IRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVKV 486

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            E+  T+A I W +G  N  P+T Y + ART ++  W  V+        D   G+   + 
Sbjct: 487 DEITDTTAQISWQEGTDNHSPVTTYTVQARTPFSVGWQRVT-----TVPDVIDGKTFTTT 541

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +L I+W
Sbjct: 542 VVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITW 601

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           +P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YEVKV  
Sbjct: 602 DPIPEELQNGEGFGYVVAFRPYGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGV 660

Query: 967 INDVGPGPESEV 978
            N+ G GP S V
Sbjct: 661 YNNKGEGPFSSV 672



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 144/587 (24%), Positives = 221/587 (37%), Gaps = 57/587 (9%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  +C A G P PSY W + G  L      +  N  LTI N+ + D G Y C A N  
Sbjct: 213 DTLYWDCRASGKPKPSYRWVKNGEQLSVEGRIQIENGALTISNLNLTDSGRYQCIAENKH 272

Query: 475 SALESSVTISIQAE-PNFTIPLTDKHMDNQADLT--WTCEAFGVPDVTYSWFRNGELLNS 531
             + SS  + + A  P+F+     K +  Q   T  + C+    P    SW + GE L+ 
Sbjct: 273 GVIYSSAELRVVASAPDFSKNPMKKLIQVQIGSTVDFECKPKASPKAKCSWKKGGEQLH- 331

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                E++    ++D  L I  +  + D   Y C A NQ  T   S  L ++T       
Sbjct: 332 -----ENERITLLKDGGLRIANVT-KVDAGSYTCLATNQFGTASGSTNL-IVTEPTRIIL 384

Query: 592 RPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE------NGNL 643
            P   +   GE  +V + C  +  P     F W  +G +         FE      +G+L
Sbjct: 385 APSSMDVTVGE--SVVLPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDL 442

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I  +    SG Y C          S   LIV   P   E +  K+        Q+    
Sbjct: 443 MIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHV--KVDEITDTTAQISWQE 500

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
            T+    V   +T       ++    + T    IDG     T        EYE   V  +
Sbjct: 501 GTDNHSPVT-TYTVQARTPFSVGWQRVTTVPDVIDGKTFTTTVVDLNPWVEYEFRVVASN 559

Query: 762 TVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPIT 809
            +G         K+ T+  V    P  + GG       ++   I W    +   NG    
Sbjct: 560 KIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGG----SRSELVITWDPIPEELQNGEGF- 614

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            Y +  R    +TW  +   V   +  RY  R E+     ++P+S YE KV   N  G G
Sbjct: 615 GYVVAFRPYGTTTW--IQTVVTSPDTPRYVFRNES-----ILPFSPYEVKVGVYNNKGEG 667

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
             SS +  ++   ++P  APS +         + +SW  +P +  +   + Y++ +    
Sbjct: 668 PFSSVTTVFSA-EEEPSIAPSGVSATSLSSSVIEVSWTAIPWKMSSGRLLGYEVRYWNNG 726

Query: 930 DTEFQSETLKEYGN-VGIAVVRIPSEF-YYTEYEVKVQAINDVGPGP 974
             E  S  +K  GN   I +  + S   YYT     V+A N  G GP
Sbjct: 727 GKEESSNRVKAAGNETSIRITGLKSNLAYYT----AVRAYNSAGAGP 769



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 136/378 (35%), Gaps = 35/378 (9%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVEDRG 270
           + L C+A G P P   W + D +          P   K   L   N +I  P  Q ED G
Sbjct: 125 VKLECFALGNPVPQINWRRTDGL----------PFPSK-IKLRKSNGMIEIPNFQQEDAG 173

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYY 329
            Y C   N  G  I+      +         +  E+  ++    ++ D   +  P  +Y 
Sbjct: 174 LYECITENSRGKNIARGRLTYYAKPHWIQTIKDTEVAVED---TLYWDCRASGKPKPSYR 230

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++     VE   ++    +GAL  S L   D+G Y C  ++K      +     +   
Sbjct: 231 WVKNGEQLSVEGRIQI---ENGALTISNLNLTDSGRYQCIAENKHGVIYSSAELRVVASA 287

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF 449
           P        F  N  K   +  + G  V  EC     P    +W + G  L  N      
Sbjct: 288 PD-------FSKNPMKKLIQV-QIGSTVDFECKPKASPKAKCSWKKGGEQLHENERITLL 339

Query: 450 -NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA--DL 506
            +  L I NV   D G Y C A+N       S  + I  EP   I L    MD      +
Sbjct: 340 KDGGLRIANVTKVDAGSYTCLATNQFGTASGSTNL-IVTEPTRII-LAPSSMDVTVGESV 397

Query: 507 TWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
              C+    P  D++++W+ NG L + +      +         L IR +  +     Y 
Sbjct: 398 VLPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHS-GKYV 456

Query: 565 CRAKNQLKTRYSSAQLRV 582
           C  K ++ +  S+A L V
Sbjct: 457 CMVKTEVDSVASAADLIV 474


>gi|7959253|dbj|BAA96020.1| KIAA1496 protein [Homo sapiens]
          Length = 920

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 228/702 (32%), Positives = 342/702 (48%), Gaps = 24/702 (3%)

Query: 283 IISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341
           I+S   +L F ++  F  K    +   +  G  + C PP +   ++Y W  + +P+FVEE
Sbjct: 1   IVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEE 60

Query: 342 DKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--K 398
           D R FVS + G LY S +E  D GNY+C V S V++    G   PL +       +   K
Sbjct: 61  DSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPK 120

Query: 399 FPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPN 457
               FP+T P A   G  V+LEC A G P+P  NW R  G P         F+ +L IPN
Sbjct: 121 IEVQFPETLPAA--KGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPN 178

Query: 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
            + ED G Y C A N R    +   ++  A+P++   + D  +  +  L W C A G P 
Sbjct: 179 FQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPK 238

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            +Y W +NG  L  E       +R  I++  LTI  L+   D  M+QC A+N+    YSS
Sbjct: 239 PSYRWLKNGAALVLE-------ERTQIENGALTISNLS-VTDSGMFQCIAENKHGLVYSS 290

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
           A+L+V+   P F K P++       G  V++ C P A+P+    WKK    +    R  +
Sbjct: 291 AELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHERISL 350

Query: 638 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
             +G L I+ V++ D+G Y+C A N  G       L+V   P+     P  + ++   ++
Sbjct: 351 LNDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESV 409

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYE 756
            L C    + LLD+ + W  NG       D +  E    +  G L+ I N     +G+Y 
Sbjct: 410 ILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYV 468

Query: 757 CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
           C+V++ V  +S+   +IV G PG P  V+V E+  T+A + W +G  N  P+  Y I AR
Sbjct: 469 CMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQAR 528

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
           T ++  W  V+   + + +D   G+   +    L PW  YEF+V+A N++G GEPS PS 
Sbjct: 529 TPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSE 583

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 936
           +  T    P   PS + GGGG   +L I+W+P+P E QN     Y + +R    T +  +
Sbjct: 584 KVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQ 642

Query: 937 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           T+    +    V R  S   Y+ YEVKV   N+ G GP S V
Sbjct: 643 TVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPV 684



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 158/657 (24%), Positives = 244/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 170 FSGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 221

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 222 ---AVEDSLYWECRASGKPKPSYRWLKNGAALVLEERTQIENGALTISNLSVTDSGMFQC 278

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 279 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-KK 337

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   + D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 338 GDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVT 389

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGG 633
                   P   +   GE  +V + C  +  P     F W         KKDG+     G
Sbjct: 390 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVG 447

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
                 +G+L+I  +    SG Y C          S   LIV   P   E +        
Sbjct: 448 GSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDT 504

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
              L  +        +    I       +G   +  +  P + IDG     T        
Sbjct: 505 TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWV 561

Query: 754 EYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT--- 799
           EYE   V  + +G         K+ T+  V    P  + GG       ++   I W    
Sbjct: 562 EYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVP 617

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE K
Sbjct: 618 EELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVK 669

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   +
Sbjct: 670 VGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLL 728

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 729 GYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 781



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 131/333 (39%), Gaps = 46/333 (13%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P++++   DV     + ++ + +   C A G P PSY W K          N    + ++
Sbjct: 210 PHWVQLIKDV-----EIAVEDSLYWECRASGKPKPSYRWLK----------NGAALVLEE 254

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           R  +  G L I++   V D G + C A NK G + S +         +F+     ++   
Sbjct: 255 RTQIENGALTISN-LSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQV 313

Query: 310 NWGKAMFCD-PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
             G  +  D  P   P     W +      V+E +R+ +  DG L  + + + DAG Y+C
Sbjct: 314 QVGSLVSLDCKPRASPRALSSWKKGDVS--VQEHERISLLNDGGLKIANVTKADAGTYTC 371

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
             +++      NG    +   P    +    P+N   +       G+ V L C     P+
Sbjct: 372 MAENQFGKA--NGTTHLVVTEPT---RITLAPSNMDVSV------GESVILPCQVQHDPL 420

Query: 429 PS--YNWTRRGSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALES 479
               + W   G+         +F ++       L I N++++  G+Y+C       ++ S
Sbjct: 421 LDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSS 480

Query: 480 SVTISIQAEP----NFTIPLTDKHMDNQADLTW 508
           +  + ++  P    N  +   D+  D  A L+W
Sbjct: 481 AADLIVRGSPGPPENVKV---DEITDTTAQLSW 510



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 124/324 (38%), Gaps = 30/324 (9%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P   W + D +          P S K +     G L I + +Q ED G
Sbjct: 137 VKLECFALGNPIPQINWRRSDGL----------PFSSKIKLRKFSGVLEIPNFQQ-EDAG 185

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYY 329
           SY C A N  G  ++      +       L +  EI  ++   +++ +   +  P  +Y 
Sbjct: 186 SYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVED---SLYWECRASGKPKPSYR 242

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++     +EE  ++    +GAL  S L   D+G + C  ++K    G       LKV 
Sbjct: 243 WLKNGAALVLEERTQI---ENGALTISNLSVTDSGMFQCIAENK---HGLVYSSAELKVV 296

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF 449
             +      F  N  K   +  + G  V L+C     P    +W +    +  +      
Sbjct: 297 ASAP----DFSKNPMKKLVQV-QVGSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLL 351

Query: 450 NR-ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTW 508
           N   L I NV   D G Y C A N       +  + +      T+  ++  +     +  
Sbjct: 352 NDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVIL 411

Query: 509 TCEAFGVP--DVTYSWFRNGELLN 530
            C+    P  D+ ++W+ NG L +
Sbjct: 412 PCQVQHDPLLDIIFTWYFNGALAD 435


>gi|390339774|ref|XP_785256.3| PREDICTED: contactin-4-like [Strongylocentrotus purpuratus]
          Length = 822

 Score =  349 bits (895), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 262/811 (32%), Positives = 381/811 (46%), Gaps = 68/811 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS- 247
           GP  ++QP + +FD +    ++ ++L C A G    +Y W K+             PLS 
Sbjct: 22  GPILMQQPEETIFDTATN--VDSVSLHCRATGDEPITYTWEKDGA-----------PLSQ 68

Query: 248 --DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN-LKRAP 304
             + R  ++ G L I  P +  D G Y C ASN+ GS+ S   +L F ++  F+    + 
Sbjct: 69  ATNARLVITPGQLTITSPERTVDGGEYVCMASNQVGSVRSLPAELVFAYVDSFDPSATST 128

Query: 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV--EEDKRVFVSYDGALYFSALEQID 362
           +      G  + C+PP ++PG+   W   +  N +    D R+ V  DG L F      D
Sbjct: 129 QSLTAGQGGCVTCNPPPHFPGILVNW---FHENMLVDSSDSRIRVMDDGRLCFFYALASD 185

Query: 363 AGNYSCNVQSKV-SDTG---RNGPFFPLKVFPHSNFQQLKF-PNNFPKTFPEAPKAGDKV 417
           AG Y C V+S V SD G   R  P   + V   S+   ++    N P        AG+ V
Sbjct: 186 AGAYRCQVKSNVISDGGVEMRVSPLVTVTVNAGSSSSAIRIVQENRPTDV--TTIAGEDV 243

Query: 418 RLECVAFG----YPVPSYNWTRR---GSPLPRN-AYFENFNRILTIPNVKVEDQGEYICR 469
           + EC  +G      +P   W R    G+ LP   A  E    IL+I  V++ED G Y+C 
Sbjct: 244 KFECFFYGPQPTGQIPRVQWVRTSPPGAGLPTGRAVLEEGGEILSIVGVQLEDAGSYLCY 303

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
             +  S   +S  +++   P +     D   D      W  EA       Y+W+RNGE+L
Sbjct: 304 IDDVNSG--ASAGLNVAEAPAWVSEPMDAMKDINTMQEWNVEAEEADQ--YTWYRNGEIL 359

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
            +       +DR+  ++N+ T+   +    D AMYQC A N     YS+AQL V    P 
Sbjct: 360 TA-------RDRHQFRNNLETLIISDLMTTDTAMYQCFASNDHGMIYSAAQLSVRAFPPE 412

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISP 647
           F   P+E++  A     VT+ C+ +AAP P   W+ DG  I  G R  +  +  NL+I  
Sbjct: 413 FLS-PMETDKPAPLTATVTVVCDVDAAPAPTVTWQHDGQPITDGARYNLTADPPNLVIID 471

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
           V   D G Y CTATN +G    +G L +    +     P    +   ++  L+C A  +E
Sbjct: 472 VQMSDGGTYQCTATNSNGTVTGEGSLDIKDA-TVITGHPDNTLVEVGQSTTLKCKAAHDE 530

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
            L++ Y+W HNGV I   DL+E+E   +  D G LEI +A   D GEY CV  +      
Sbjct: 531 YLELTYLWEHNGVEI---DLSEIERYRMR-DNGNLEIVSAQLRDGGEYTCVALTVADSDR 586

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
           +  T+ + GPPG P G+ V EV   +A ++W  G  N  PIT + I  +T+ +  W  + 
Sbjct: 587 SSATLDIAGPPGPPSGLSV-EVENLAANLRWVPGTDNNSPITSFTIEGQTDHSDEWVELR 645

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPY 886
                       G     + N L P+S Y F+VIA N +G G PS P      T    P 
Sbjct: 646 S-------GESAGSNSVRLVN-LDPFSLYSFRVIAVNRIGRGTPSEPVEAGVKTGKTAPT 697

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946
            +PS +GGGGG  GDL I+W+  P  K N+  + YK+ W+K  D++  S  L E  N  I
Sbjct: 698 ASPSNVGGGGGNTGDLRITWDKFPSSKWNSETVSYKVEWQKV-DSQVSSTGLLEEPNAII 756

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
               +  E  YT+Y V+VQA ND G GP SE
Sbjct: 757 YTATLGIEL-YTQYNVRVQAKNDEGEGPFSE 786


>gi|47227363|emb|CAF96912.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 786

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 219/644 (34%), Positives = 321/644 (49%), Gaps = 23/644 (3%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           + Y W  + +P+FV++D R F+S + G+LY + +E+ D GNY+C V + V+         
Sbjct: 2   LTYAWIFNEYPHFVQQDSRRFISQETGSLYIAKVERSDVGNYTCVVNNTVTGDKVLSSPT 61

Query: 385 PLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR-RGSPLP 441
           PL +       +   K   +FP++ P A ++   V+LEC A G PVP  +W R  G P P
Sbjct: 62  PLVLRSDGVMGEYEPKIEVHFPESVPAAKESA--VKLECFALGNPVPEISWRRTSGIPFP 119

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
                +N N +L IPN + ED G Y C A N R    +   +S  A+P++   + D  + 
Sbjct: 120 SKVKMKNSNAVLEIPNFQQEDAGTYECVAENRRGKNAARGRLSFHAKPHWLQTMADTALS 179

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
            +A+L W C+A G P  +YSW +NGE + +E        R  I +  L+I  LN   D  
Sbjct: 180 IEANLFWECKANGKPKPSYSWLKNGEQVAAE-------GRIQIDNGALSIAVLN-LSDSG 231

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           MYQC A+N+    YSSAQL VL   P+F K PL++   A  G  VT+ C PEA P    +
Sbjct: 232 MYQCVAENKHGIIYSSAQLMVLASPPNFSKSPLKALLKARSGSEVTLECKPEAWPPAISL 291

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           WKK   I+    R  +  NG + I+  +R D+G Y+C A N  G   + G+L++   P+ 
Sbjct: 292 WKKGNEILPRTERINLLPNGTIKIANATRQDAGSYTCIAKNQFGTASTTGKLLITE-PTR 350

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGG 740
               P    I    +  L C    +  LDV++ W  NG  I    D N  E    ++ G 
Sbjct: 351 ITMRPTNTEIIVGESAVLPCQIAFDPALDVSFSWAFNGQLIDFQRDGNHFERVGGSVSGD 410

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
           L+ I N   +  G+Y C++ + V  +ST   ++V+GPPG P  V V E+  ++A + WT 
Sbjct: 411 LM-IRNIQLSHGGKYVCLIDTDVESLSTSAILVVKGPPGPPDKVTVEEITDSTAQLSWTP 469

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
           G  NG PIT Y I ART +   W       +    +   G    +    L  W  YEF+V
Sbjct: 470 GRDNGSPITGYIIQARTPFTVGW-----QAVDTVPEVINGNMLTATVVGLNAWVEYEFRV 524

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G GEPS  S +  T    P  AP+ +GGGGG   +L I+WEP+P E QN     
Sbjct: 525 VARNAVGLGEPSPASAKTRTEDSIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGEGFG 584

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 964
           Y I +R      +    +   G V   V R  +   ++ +EVKV
Sbjct: 585 YIIAFRPLGMVTWTRAAISTPG-VARYVFRNDTIPAFSPFEVKV 627



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/335 (20%), Positives = 129/335 (38%), Gaps = 48/335 (14%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P++++   D        SI  ++   C A G P PSY W K     +++ A       + 
Sbjct: 167 PHWLQTMADTAL-----SIEANLFWECKANGKPKPSYSWLKNG---EQVAA-------EG 211

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           R  +  G L I     + D G Y C A NK G I S +  +       F+      +   
Sbjct: 212 RIQIDNGALSI-AVLNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPNFSKSPLKALLKA 270

Query: 310 NWGK--AMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
             G    + C P    P ++  W +      +   +R+ +  +G +  +   + DAG+Y+
Sbjct: 271 RSGSEVTLECKPEAWPPAIS-LWKKGN--EILPRTERINLLPNGTIKIANATRQDAGSYT 327

Query: 368 CNVQSKVSDTGRNGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VA 423
           C  +++       G      P ++       ++                G+   L C +A
Sbjct: 328 CIAKNQFGTASTTGKLLITEPTRITMRPTNTEIIV--------------GESAVLPCQIA 373

Query: 424 FGYPVP-SYNWTRRGSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRS 475
           F   +  S++W   G  +       +F R+       L I N+++   G+Y+C    D  
Sbjct: 374 FDPALDVSFSWAFNGQLIDFQRDGNHFERVGGSVSGDLMIRNIQLSHGGKYVCLIDTDVE 433

Query: 476 ALESSVTISIQAEPNFTIPLTDKHM-DNQADLTWT 509
           +L +S  + ++  P     +T + + D+ A L+WT
Sbjct: 434 SLSTSAILVVKGPPGPPDKVTVEEITDSTAQLSWT 468


>gi|363738787|ref|XP_414433.3| PREDICTED: contactin-3 [Gallus gallus]
          Length = 910

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 222/672 (33%), Positives = 328/672 (48%), Gaps = 23/672 (3%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C  P     +++ W  + +P+FV+ED R FVS + G LY + +E  D GNY+C V
Sbjct: 21  GVVLLCGTPPRAGELSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYTCVV 80

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
            S V+++   G   PL +       +   K    FP+T P A   G  V+LEC A G PV
Sbjct: 81  TSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFALGNPV 138

Query: 429 PSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           P  NW R  G P P        N ++ IPN + ED G Y C   N R    +   ++  A
Sbjct: 139 PQINWRRTDGMPFPSKIKLRKSNGMIEIPNFQQEDAGLYECITENSRGKNIARGRLTYYA 198

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           +P++   + D  +  +  L W C A G P  +Y W +NGE L+ E        R  I++ 
Sbjct: 199 KPHWIQMIKDTEIAVEDTLYWDCRASGKPKPSYRWLKNGEQLSVE-------GRIQIENG 251

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            LTI  LN   D   YQC A+N+    YSSA+LRV+   P F K P++       G  V 
Sbjct: 252 ALTISSLN-LTDSGRYQCIAENKHGVIYSSAELRVVASAPDFSKNPMKKMIQVQIGSTVD 310

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
             C P+A+PK +  WKK G  +    R  + ++G L I+ V++ D+G Y+C ATN  G  
Sbjct: 311 FECKPKASPKARCSWKKGGEQLHENERITLLKDGGLRITNVTKVDAGSYTCVATNQFGTA 370

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMD 726
                L+V   P+     P  + +    ++ L C    + +LD+++ W  NG       D
Sbjct: 371 SGTTNLVVTE-PTRIILAPSNMDVTVGESVILPCQVQHDPILDISFTWYFNGTLTDFKKD 429

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
            +  E    +  G L+ I N     +G+Y C+VK+ V  +++   +IV G PG P  V+V
Sbjct: 430 ASHFEKVGGSASGDLM-IRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRV 488

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            E+  T+A I W +G  N  P+T Y I ART ++  W  V+        D   G    + 
Sbjct: 489 DEITDTTAQISWQEGTDNHSPVTAYTIQARTPFSVGWQRVT-----TVPDVIDGNTFTTT 543

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              L PW  YEF+V+A N++G GEPS PS +  T    P   P+ + GGGG   +L I+W
Sbjct: 544 VVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSELVITW 603

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           +P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YEVKV  
Sbjct: 604 DPIPEELQNGEGFGYVVAFRPFGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGV 662

Query: 967 INDVGPGPESEV 978
            N+ G GP S +
Sbjct: 663 YNNKGEGPFSSI 674



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 156/654 (23%), Positives = 247/654 (37%), Gaps = 72/654 (11%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G +     +Q DAG Y C  ++     G+N     L  +   ++ Q+            
Sbjct: 161 NGMIEIPNFQQEDAGLYECITEN---SRGKNIARGRLTYYAKPHWIQMIKDTEI------ 211

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                D +  +C A G P PSY W + G  L      +  N  LTI ++ + D G Y C 
Sbjct: 212 --AVEDTLYWDCRASGKPKPSYRWLKNGEQLSVEGRIQIENGALTISSLNLTDSGRYQCI 269

Query: 470 ASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQADLT--WTCEAFGVPDVTYSWFRNG 526
           A N    + SS  + + A  P+F+     K +  Q   T  + C+    P    SW + G
Sbjct: 270 AENKHGVIYSSAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKGG 329

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E L+      E++    ++D  L I  +  + D   Y C A NQ  T   +  L V+T  
Sbjct: 330 EQLH------ENERITLLKDGGLRITNVT-KVDAGSYTCVATNQFGTASGTTNL-VVTEP 381

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE----- 639
                 P   +   GE  +V + C  +  P     F W  +G +         FE     
Sbjct: 382 TRIILAPSNMDVTVGE--SVILPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGS 439

Query: 640 -NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
            +G+L+I  +    SG Y C          S   LIV   P   E +  ++        Q
Sbjct: 440 ASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHV--RVDEITDTTAQ 497

Query: 699 LRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
           +     T+    V AY I       +G   +  +  P++ IDG     T        EYE
Sbjct: 498 ISWQEGTDNHSPVTAYTIQARTPFSVGWQRVTTV--PDV-IDGNTFTTTVVDLNPWVEYE 554

Query: 757 --CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGA 802
              V  + +G         K+ T+  V    P  + GG       ++   I W    +  
Sbjct: 555 FRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGG----SRSELVITWDPIPEEL 610

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            NG     Y +  R    +TW  +   V   +  RY  R E+     ++P+S YE KV  
Sbjct: 611 QNGEGF-GYVVAFRPFGTTTW--IQTVVTSPDTPRYVFRNES-----ILPFSPYEVKVGV 662

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G  SS +  ++   ++P  APS +         + +SW+ +P +  +   + Y+
Sbjct: 663 YNNKGEGPFSSITTVFSA-EEEPTVAPSGVSVTSLSSSVIEVSWKAIPWKMSSGRLLGYE 721

Query: 923 IFWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEF-YYTEYEVKVQAINDVGPGP 974
           + +      E  S  +K  GN   I +  + S   YYT     V+A N  G GP
Sbjct: 722 VRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYT----AVRAYNSAGAGP 771



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 120/308 (38%), Gaps = 43/308 (13%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS-DKRFTLSGGNLIINDPRQVEDRGSYHC 274
           C A G P PSY W K             + LS + R  +  G L I+    + D G Y C
Sbjct: 221 CRASGKPKPSYRWLKNG-----------EQLSVEGRIQIENGALTISS-LNLTDSGRYQC 268

Query: 275 KASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAM-FCDPPTNYPGVNYYWARD 333
            A NK G I S +         +F+     ++     G  + F   P   P     W + 
Sbjct: 269 IAENKHGVIYSSAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKG 328

Query: 334 YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFP 390
                + E++R+ +  DG L  + + ++DAG+Y+C   N     S T       P ++  
Sbjct: 329 --GEQLHENERITLLKDGGLRITNVTKVDAGSYTCVATNQFGTASGTTNLVVTEPTRI-- 384

Query: 391 HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRNAYFEN 448
                 +  P+N   T       G+ V L C     P+   S+ W   G+         +
Sbjct: 385 ------ILAPSNMDVT------VGESVILPCQVQHDPILDISFTWYFNGTLTDFKKDASH 432

Query: 449 FNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL-TDKHM 500
           F ++       L I N++++  G+Y+C    +  ++ S+  + ++  P     +  D+  
Sbjct: 433 FEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEIT 492

Query: 501 DNQADLTW 508
           D  A ++W
Sbjct: 493 DTTAQISW 500



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 140/378 (37%), Gaps = 35/378 (9%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVEDRG 270
           + L C+A G P P   W + D +          P   K   L   N +I  P  Q ED G
Sbjct: 127 VKLECFALGNPVPQINWRRTDGM----------PFPSK-IKLRKSNGMIEIPNFQQEDAG 175

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYY 329
            Y C   N  G  I+      +       + +  EI  ++    ++ D   +  P  +Y 
Sbjct: 176 LYECITENSRGKNIARGRLTYYAKPHWIQMIKDTEIAVED---TLYWDCRASGKPKPSYR 232

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++     VE   ++    +GAL  S+L   D+G Y C  ++K      +     +   
Sbjct: 233 WLKNGEQLSVEGRIQI---ENGALTISSLNLTDSGRYQCIAENKHGVIYSSAELRVVASA 289

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF 449
           P        F  N  K   +  + G  V  EC     P    +W + G  L  N      
Sbjct: 290 PD-------FSKNPMKKMIQV-QIGSTVDFECKPKASPKARCSWKKGGEQLHENERITLL 341

Query: 450 -NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA--DL 506
            +  L I NV   D G Y C A+N +    S  T  +  EP   I L   +MD      +
Sbjct: 342 KDGGLRITNVTKVDAGSYTCVATN-QFGTASGTTNLVVTEPTRII-LAPSNMDVTVGESV 399

Query: 507 TWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
              C+    P  D++++W+ NG L + +      +         L IR +  +     Y 
Sbjct: 400 ILPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHS-GKYV 458

Query: 565 CRAKNQLKTRYSSAQLRV 582
           C  K ++ +  S+A L V
Sbjct: 459 CMVKTEVDSVASAADLIV 476


>gi|62413634|ref|NP_001014814.1| contactin-1 precursor [Danio rerio]
 gi|34419873|gb|AAQ67360.1| recognition molecule F3-b [Danio rerio]
          Length = 1031

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 241/802 (30%), Positives = 378/802 (47%), Gaps = 50/802 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F ++P D V+  ++ S  N I+++C     P    +W+  ++ Q +L+        D
Sbjct: 41  GPIFEEEPLDTVY--AEDSPENKISMNCRVRANPPAIIKWWLNNW-QIKLMEQ-----PD 92

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIG 307
           + F+L GGNL+I +P + +  G Y C A N +G+++S+   + FG++ +F   +R P   
Sbjct: 93  EHFSLVGGNLVITNPEKNKHAGKYVCVAKNVYGTVMSKEANVKFGYLNQFPTDEREPVNV 152

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
            +  G  + C PP+ YP  V + W  + FPNF+  D+R FVS   G LY + +E  D GN
Sbjct: 153 KEGQGAVLLCTPPSRYPDEVMFRWIYNDFPNFIIPDQRRFVSQSTGNLYIAKVEPSDVGN 212

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S     G++    P+ + P    +  ++P +    FP+        + LEC A 
Sbjct: 213 YSCFVSSPT--IGKSVFSMPIALIPQIEKEVKRYPADIRVKFPKTYALVHQNITLECFAL 270

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G P+P   W +  + LP N        +L + NV+ ED+G Y C   N +        + 
Sbjct: 271 GNPLPHIRWRKLDADLPPNYEVSMNGALLHLINVQYEDEGSYECETLNVKGMDWYRQWLY 330

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++  P +   + D   D  ++LT  C A G P     W ++G               Y  
Sbjct: 331 VEGPPEWAEHINDTEKDVGSELTLRCVAVGKPIPWIRWLKDG---------------YSY 375

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               L    L  E D  MYQC A+N+  T Y++A+LRV++  P+F   P++      E G
Sbjct: 376 GKGELKFSSLTFE-DSGMYQCIAENEWGTIYANAELRVVSCAPTFIYNPVKKILLGAENG 434

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I CNP AAPKP+F+WK+   ++ +  R  I+++G+L I   ++ D G Y+C A N  
Sbjct: 435 RVVIECNPRAAPKPRFIWKRGSELLSNSSRIFIWDDGSLEILNATKSDEGSYTCYAENDR 494

Query: 665 GMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
           G   S G L +        GPS  E        A    + L+CSA  +  LDV +IWT +
Sbjct: 495 GKSNSTGTLTITEATKITVGPSNSEA-------AVGDTIVLQCSASYDPSLDVTFIWTVD 547

Query: 719 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
              I    D    E    + + G L I N     AG Y C  ++ V   + +  V V G 
Sbjct: 548 SYSINFYTDFEHYELDMDHENSGDLLIKNIQIRHAGHYICTAQTIVDNATAEADVFVRGL 607

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG PGGV+V E+  TS  I+W  G+ +G P+  + +  R  +     +  +         
Sbjct: 608 PGPPGGVRVEEIGDTSVKIRWCLGSDHGSPLIQHIVQTRDFYA---LDPEDWKTATTTPA 664

Query: 838 Y-TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
           +  G  E++    L PW  YEF+V A NE G GE S PS +  T   +P  APS + G  
Sbjct: 665 FLNGSTESATVVDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVIGQV 724

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
           G  G+L ++W P+  +        Y + +++  D E++  T+++        V   S   
Sbjct: 725 GISGELIVTWNPVKPQFFFGKKFGYVVAFKQHEDYEWKWSTVEDPETR--RYVYKESMTP 782

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
            TE ++KV   N+ G GP S +
Sbjct: 783 DTEIQIKVSTFNNKGEGPASLI 804


>gi|41323984|gb|AAS00058.1| contactin [Carassius auratus]
          Length = 1029

 Score =  345 bits (886), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 239/798 (29%), Positives = 376/798 (47%), Gaps = 42/798 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F ++P D V+  ++ S  N I+++C A   P    +W+  ++ + +L+        D
Sbjct: 39  GPIFEEEPLDTVY--AEDSPENKISMNCRARANPPALIKWWLNNW-EIKLMEQ-----PD 90

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIG 307
           + F+L GGNL+I +P + +  G Y C A N +G++IS+   + FG++ +F   +R P   
Sbjct: 91  EHFSLVGGNLVITNPDKGKHAGKYVCVAKNVYGTVISKEATVKFGYLNQFPTDEREPVHV 150

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
            +  G  + C PP+ YP  V + W  + FPNF+  D+R FVS   G +Y + +E  D GN
Sbjct: 151 KEGQGAVLLCSPPSRYPSEVLFRWIYNDFPNFIIPDQRRFVSQTTGNMYIAKVEASDVGN 210

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S     G++    P+ + P    +  ++P +    FP+        + LEC A 
Sbjct: 211 YSCFVSSPT--IGKSVFSMPIPLLPQIEKEVKRYPADIRVKFPKTYALVHQNITLECFAL 268

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G P+P   W +  + LP N        +L + NV+ ED+G Y C   N +        + 
Sbjct: 269 GNPLPHIRWRKLDADLPPNYEVSMNGALLHLINVQYEDEGSYECETLNVKGMDWYRQWLY 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++  P +   + D   D  ++LT  C A G P     W ++G               Y  
Sbjct: 329 VEGAPEWAEHINDTEKDVGSELTLRCVAVGKPLPWIRWLKDG---------------YSY 373

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               L    L  E D  MYQC A+N+  T Y+SA+LRV++  P+F   P++      E G
Sbjct: 374 GKGELKFSSLTFE-DSGMYQCVAENEWGTIYASAELRVVSCAPTFIYNPVKKVLLGAEKG 432

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P AAPKPKF+WK+   ++ +  R  I+++G+L I  VS+ D G Y+C A N  
Sbjct: 433 RVVIECKPRAAPKPKFIWKRGSELLTNSSRMLIWDDGSLEILNVSKSDEGSYTCYAENDR 492

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G   S G L +    +     P            L+CSA  +  LD+ +IWT +   I  
Sbjct: 493 GKSNSTGTLTITEA-TKITVAPSDTEAVVGDTAILQCSASFDPSLDITFIWTVDSYVINF 551

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             D    E    + + G L I N     AG Y C  ++ V   + +  V V G PG PGG
Sbjct: 552 YTDFEHYELLMGHENRGDLLIKNIQVRHAGHYSCTAQTIVDNATAEADVSVRGLPGPPGG 611

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN---STWFNVSEHVIGKEVDRYTG 840
           V+V E+  TS  ++W+ G+ +G  +  + +  R  +      W   S   +  +     G
Sbjct: 612 VRVEEIGDTSVKLRWSLGSDHGSSLIQHVVQTRDFYALDPEDWKTASTSPVFLD-----G 666

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
             E++    L PW  YEF+V A NE G GE S PS +  T   +P  APS + G  G  G
Sbjct: 667 SAESATVLDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVIGQVGISG 726

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           +L ++W P+  +        Y + +++  D E++  T+++        +   S    TE 
Sbjct: 727 ELIVTWTPVKPQFFFGKKFGYTVAFKQHEDYEWKWSTVEDPETR--RYIYKESMTPDTEI 784

Query: 961 EVKVQAINDVGPGPESEV 978
           +VKV   N+ G GP S +
Sbjct: 785 QVKVSTYNNKGEGPSSLI 802


>gi|326928154|ref|XP_003210246.1| PREDICTED: contactin-3-like [Meleagris gallopavo]
          Length = 941

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 220/672 (32%), Positives = 328/672 (48%), Gaps = 23/672 (3%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C  P     +++ W  + +P+FV+ED R FVS + G LY + +E  D GNY+C V
Sbjct: 52  GVVLLCGTPPRAGELSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYTCVV 111

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
            S V+++   G   PL +       +   K    FP+T P A   G  V+LEC A G PV
Sbjct: 112 TSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFALGNPV 169

Query: 429 PSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           P  NW R  G P P        N ++ IPN + ED G Y C   N R    +   ++  A
Sbjct: 170 PQINWRRTDGMPFPSKIKLRKSNGMIEIPNFQQEDAGLYECITENSRGKNIARGRLTYYA 229

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           +P++   + D  +  +  L W C A G P  +Y W +NG+ L+ E        R  +++ 
Sbjct: 230 KPHWIQMIKDTEIAVEDTLYWDCRASGKPKPSYRWLKNGDQLSVE-------GRIQVENG 282

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            LTI  LN   D   YQC A+N+    YSSA+LRV+   P F K P++       G  V 
Sbjct: 283 ALTISNLN-LTDSGRYQCVAENKHGVIYSSAELRVVASAPDFSKNPMKKMIQVQIGSTVD 341

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
             C P+A+PK +  WKK G  +    R  + ++G L I+ V++ D+G Y+C ATN  G  
Sbjct: 342 FECKPKASPKARCSWKKGGEQLHENERITLLKDGGLRITNVTKVDAGSYTCVATNQFGTA 401

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMD 726
                L+V   P+     P  + +    ++ L C    + +LD+++ W  NG       D
Sbjct: 402 SGTTNLVVTE-PTRITLAPSNMDVTVGESVILPCQVQHDPILDISFTWYFNGTLTDFKKD 460

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
            +  E    +  G L+ I N     +G+Y C+VK+ V  +++   +IV G PG P  V+V
Sbjct: 461 ASHFEKVGGSASGDLM-IRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRV 519

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            E+  T+A I W +G  N  P+T Y + ART ++  W  V+        D   G    + 
Sbjct: 520 DEITDTTAQISWQEGTDNHSPVTAYTVQARTPFSVGWQRVT-----TVPDVIDGNTFTTT 574

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              L PW  YEF+V+A N++G GEPS PS +  T    P   P+ + GGGG   +L I+W
Sbjct: 575 VVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSELVITW 634

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           +P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YEVKV  
Sbjct: 635 DPIPEELQNGEGFGYVVAFRPFGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGV 693

Query: 967 INDVGPGPESEV 978
            N+ G GP S V
Sbjct: 694 YNNKGEGPFSSV 705



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 156/654 (23%), Positives = 247/654 (37%), Gaps = 72/654 (11%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G +     +Q DAG Y C  ++     G+N     L  +   ++ Q+            
Sbjct: 192 NGMIEIPNFQQEDAGLYECITEN---SRGKNIARGRLTYYAKPHWIQMIKDTEI------ 242

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                D +  +C A G P PSY W + G  L      +  N  LTI N+ + D G Y C 
Sbjct: 243 --AVEDTLYWDCRASGKPKPSYRWLKNGDQLSVEGRIQVENGALTISNLNLTDSGRYQCV 300

Query: 470 ASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQADLT--WTCEAFGVPDVTYSWFRNG 526
           A N    + SS  + + A  P+F+     K +  Q   T  + C+    P    SW + G
Sbjct: 301 AENKHGVIYSSAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKGG 360

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E L+      E++    ++D  L I  +  + D   Y C A NQ  T   +  L V+T  
Sbjct: 361 EQLH------ENERITLLKDGGLRITNVT-KVDAGSYTCVATNQFGTASGTTNL-VVTEP 412

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE----- 639
                 P   +   GE  +V + C  +  P     F W  +G +         FE     
Sbjct: 413 TRITLAPSNMDVTVGE--SVILPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGS 470

Query: 640 -NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
            +G+L+I  +    SG Y C          S   LIV   P   E +  ++        Q
Sbjct: 471 ASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHV--RVDEITDTTAQ 528

Query: 699 LRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
           +     T+    V AY +       +G   +  +  P++ IDG     T        EYE
Sbjct: 529 ISWQEGTDNHSPVTAYTVQARTPFSVGWQRVTTV--PDV-IDGNTFTTTVVDLNPWVEYE 585

Query: 757 --CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGA 802
              V  + +G         K+ T+  V    P  + GG       ++   I W    +  
Sbjct: 586 FRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGG----SRSELVITWDPIPEEL 641

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            NG     Y +  R    +TW  +   V   +  RY  R E+     ++P+S YE KV  
Sbjct: 642 QNGEGF-GYVVAFRPFGTTTW--IQTVVTSPDTPRYVFRNES-----ILPFSPYEVKVGV 693

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N  G G  SS +  ++   ++P  APS +         + +SW+ +P +  +   + Y+
Sbjct: 694 YNNKGEGPFSSVTTVFSA-EEEPTVAPSGVSVTSLSSSVIEVSWKAIPWKMSSGRLLGYE 752

Query: 923 IFWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEF-YYTEYEVKVQAINDVGPGP 974
           + +      E  S  +K  GN   I +  + S   YYT     V+A N  G GP
Sbjct: 753 VRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYT----AVRAYNSAGAGP 802



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 37/305 (12%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS-DKRFTLSGGNLIINDPRQVEDRGSYHC 274
           C A G P PSY W K             D LS + R  +  G L I++   + D G Y C
Sbjct: 252 CRASGKPKPSYRWLKNG-----------DQLSVEGRIQVENGALTISN-LNLTDSGRYQC 299

Query: 275 KASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAM-FCDPPTNYPGVNYYWARD 333
            A NK G I S +         +F+     ++     G  + F   P   P     W + 
Sbjct: 300 VAENKHGVIYSSAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKG 359

Query: 334 YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393
                + E++R+ +  DG L  + + ++DAG+Y+C   ++    G       L V   + 
Sbjct: 360 --GEQLHENERITLLKDGGLRITNVTKVDAGSYTCVATNQF---GTASGTTNLVVTEPTR 414

Query: 394 FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRNAYFENFNR 451
                 P+N   T       G+ V L C     P+   S+ W   G+         +F +
Sbjct: 415 ITLA--PSNMDVT------VGESVILPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEK 466

Query: 452 I-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL-TDKHMDNQ 503
           +       L I N++++  G+Y+C    +  ++ S+  + ++  P     +  D+  D  
Sbjct: 467 VGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEITDTT 526

Query: 504 ADLTW 508
           A ++W
Sbjct: 527 AQISW 531



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/376 (22%), Positives = 136/376 (36%), Gaps = 31/376 (8%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVEDRG 270
           + L C+A G P P   W + D +          P   K   L   N +I  P  Q ED G
Sbjct: 158 VKLECFALGNPVPQINWRRTDGM----------PFPSK-IKLRKSNGMIEIPNFQQEDAG 206

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYY 329
            Y C   N  G  I+      +       + +  EI  ++    ++ D   +  P  +Y 
Sbjct: 207 LYECITENSRGKNIARGRLTYYAKPHWIQMIKDTEIAVED---TLYWDCRASGKPKPSYR 263

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++     VE   +V    +GAL  S L   D+G Y C  ++K      +     +   
Sbjct: 264 WLKNGDQLSVEGRIQV---ENGALTISNLNLTDSGRYQCVAENKHGVIYSSAELRVVASA 320

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF 449
           P        F  N  K   +  + G  V  EC     P    +W + G  L  N      
Sbjct: 321 PD-------FSKNPMKKMIQV-QIGSTVDFECKPKASPKARCSWKKGGEQLHENERITLL 372

Query: 450 -NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTW 508
            +  L I NV   D G Y C A+N       +  + +      T+  ++  +     +  
Sbjct: 373 KDGGLRITNVTKVDAGSYTCVATNQFGTASGTTNLVVTEPTRITLAPSNMDVTVGESVIL 432

Query: 509 TCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
            C+    P  D++++W+ NG L + +      +         L IR +  +     Y C 
Sbjct: 433 PCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHS-GKYVCM 491

Query: 567 AKNQLKTRYSSAQLRV 582
            K ++ +  S+A L V
Sbjct: 492 VKTEVDSVASAADLIV 507


>gi|444516815|gb|ELV11290.1| Contactin-1, partial [Tupaia chinensis]
          Length = 886

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 226/671 (33%), Positives = 332/671 (49%), Gaps = 29/671 (4%)

Query: 312 GKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCN 369
           G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC 
Sbjct: 31  GMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCF 90

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPV 428
           V S          F PL   P    +   +P +    F +     G  V LEC A G PV
Sbjct: 91  VSSPSITKSVFSKFIPLIPIPERTTK--PYPADIIVQFKDIYTLMGQNVTLECFALGNPV 148

Query: 429 PSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
           P   W +   P+P  A       +L I N+++ED+G Y C A N +   +    I +QA 
Sbjct: 149 PDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIKGKDKHQARIYVQAF 208

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P +   + D  +D  +DL W C A G P  T  W +NG   +   L L D          
Sbjct: 209 PEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD---------- 258

Query: 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
             + + N      MYQC A+N     Y++A+L++L L P+F+  P++ +  A +GG V I
Sbjct: 259 --VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVII 312

Query: 609 FCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 668
            C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D G+Y+C A N  G   
Sbjct: 313 ECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGVYTCFAENNRGKAN 372

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
           S G L++   P+     P    I    N  ++C+A  +  LD+ +IW+ NG  I     N
Sbjct: 373 STGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKEN 431

Query: 729 ELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
                N  +D  G L I NA    AG Y C  ++ V   S    ++V GPPG PGG+++ 
Sbjct: 432 IHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIE 491

Query: 788 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
           ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +     G  EA+  
Sbjct: 492 DIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAAKA 546

Query: 848 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
             L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG   +L+I+W 
Sbjct: 547 VDLIPWMEYEFRVVATNTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWA 606

Query: 908 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
           PL RE     N  Y + ++  +  E++  T+      G  V +  +    T ++VKV+A 
Sbjct: 607 PLSREYHYGNNFGYIVAFKPFDGVEWKKVTVTN-PETGRYVHKDETMSPSTAFQVKVKAF 665

Query: 968 NDVGPGPESEV 978
           N  G GP S +
Sbjct: 666 NSKGDGPYSLI 676



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 137/595 (23%), Positives = 231/595 (38%), Gaps = 74/595 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  +   CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N 
Sbjct: 223 GSDLYWPCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENT 274

Query: 474 RSALESSVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LL 529
             A+ ++  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+
Sbjct: 275 HGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLV 334

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS  +          +D  L I  +    D  +Y C A+N      S+  L V+T     
Sbjct: 335 NSSRI-------LIWEDGSLEINNIT-RNDGGVYTCFAENNRGKANSTGTL-VITDPTRI 385

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGN 642
              P+ ++   GE   +    + + A    F+W  +G +I        ++       NG 
Sbjct: 386 ILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGE 445

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           LLI       +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S
Sbjct: 446 LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWS 503

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             ++    ++  +T     I + D  + +T    I+G +            EYE  V   
Sbjct: 504 RGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAAKAVDLIPWMEYEFRV--- 559

Query: 763 VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPIT---------- 809
              ++T T  I  G P +P     ++    +  +  +D   G  + R +T          
Sbjct: 560 ---VATNTLGI--GEPSIPS--NRIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREY 612

Query: 810 HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
           HY      I+A   ++   W  V+  V   E  RY  + E      + P + ++ KV A 
Sbjct: 613 HYGNNFGYIVAFKPFDGVEWKKVT--VTNPETGRYVHKDE-----TMSPSTAFQVKVKAF 665

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N  G G P S     N+  D P +AP+ +G       ++S+ W+ +  +   +  I Y  
Sbjct: 666 NSKGDG-PYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVESYQIRYWA 724

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              K+        T +EY        R+ +    T+Y V+V A N  G GP S+V
Sbjct: 725 AHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFVEVGACNSAGCGPPSDV 773



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 120/319 (37%), Gaps = 54/319 (16%)

Query: 208 ILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267
           I +D+   C A G P P+  W K  Y   +                  G L + D    E
Sbjct: 222 IGSDLYWPCVATGKPIPTIRWLKNGYAYHK------------------GELRLYD-VTFE 262

Query: 268 DRGSYHCKASNKFGSII--SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
           + G Y C A N  G+I   +E   LA     E N  +   +  +  G+ +    P   P 
Sbjct: 263 NAGMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKG-GRVIIECKPKAAPK 321

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGP 382
             + W++     ++    R+ +  DG+L  + + + D G Y+C   N + K + TG    
Sbjct: 322 PKFSWSKG--TEWLVNSSRILIWEDGSLEINNITRNDGGVYTCFAENNRGKANSTGTLVI 379

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPL 440
             P ++        +  P N   T       G+   ++C A   P    ++ W+  G  +
Sbjct: 380 TDPTRI--------ILAPINADIT------VGENATMQCAASFDPALDLTFIWSFNGYVI 425

Query: 441 PRNA----YFENF----NRILTIPNVKVEDQGEYICRASN--DRSALESSVTISIQAEPN 490
             N     Y  NF    N  L I N +++  G Y C A    D S+  + + +     P 
Sbjct: 426 DFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPP 485

Query: 491 FTIPLTDKHMDNQADLTWT 509
             + + D    + A LTW+
Sbjct: 486 GGLRIEDIRATSVA-LTWS 503


>gi|449474272|ref|XP_002186724.2| PREDICTED: contactin-3, partial [Taeniopygia guttata]
          Length = 916

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 226/672 (33%), Positives = 323/672 (48%), Gaps = 23/672 (3%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C  P     +++ W  + +P+FV+ED R FVS + G LY + +E  D GNYSC V
Sbjct: 39  GVVLLCGTPPRAGDMSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYSCVV 98

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
            S+ S +   G   PL +       +   K    FP+T   A   G  V+LEC A G PV
Sbjct: 99  TSRASSSPVLGSPTPLVLRTDGVMGEYEPKIEVQFPETM--AAAKGSTVKLECFALGNPV 156

Query: 429 PSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           P  NW R  G P P        N ++ IPN + ED G Y C   N R    +   ++  A
Sbjct: 157 PQINWRRTDGLPFPSKIKLRKSNGMIEIPNFQQEDAGLYECITENSRGKNIARGRLTYYA 216

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           +P++   + D  +  +  L W C A G P  +Y W +NGE L  E        R  I++ 
Sbjct: 217 KPHWIQTIKDMEVAVEDTLYWDCRASGKPKPSYRWLKNGEQLAIE-------GRIQIENG 269

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            LTI  LN   D   YQC A+N+     SSA+LRV+   P F K P++       G  V 
Sbjct: 270 ALTISNLN-LTDSGRYQCIAENKHGVISSSAELRVVASAPDFSKSPMKKLIQVQIGSTVD 328

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
             C P+A PK K  WKK G  +    R  + ++G L I+ V++ D+G Y+C ATN  G  
Sbjct: 329 FECKPKAFPKAKRSWKKGGEQLQENERISLLKDGGLRIANVTKGDAGSYTCLATNQFGTA 388

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMD 726
                L+V   P+     P  + +    ++ L C    + LLD+++ W  NG       D
Sbjct: 389 RGSTSLVVTE-PTRITLAPSNMDVTVGESVVLPCQVQHDPLLDISFTWYFNGTLTDFQRD 447

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
            +  E    +  G L+ I N     +G+Y C+VK+ V  +++   +IV G PG P  V+V
Sbjct: 448 ASHFEKVGGSASGDLM-IRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRV 506

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            EV  T+A I W +G  N  P+T Y I ART ++  W   +        D   G+   S 
Sbjct: 507 DEVTDTTAQISWQEGTDNHSPVTTYSIQARTPFSVGWQRAT-----TVPDVIDGKTFTST 561

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +L I+W
Sbjct: 562 VVDLNPWVEYEFRVVATNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITW 621

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           +P+P E QN     Y + +R    T +  +T+    +    V R  S   ++ YEVKV  
Sbjct: 622 DPVPEELQNGEGFGYVVAFRPSGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGV 680

Query: 967 INDVGPGPESEV 978
            N+ G GP S V
Sbjct: 681 YNNKGEGPFSAV 692



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 222/589 (37%), Gaps = 61/589 (10%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  +C A G P PSY W + G  L      +  N  LTI N+ + D G Y C A N  
Sbjct: 233 DTLYWDCRASGKPKPSYRWLKNGEQLAIEGRIQIENGALTISNLNLTDSGRYQCIAENKH 292

Query: 475 SALESSVTISIQAE-PNFTIPLTDKHMDNQADLT--WTCEAFGVPDVTYSWFRNGELLNS 531
             + SS  + + A  P+F+     K +  Q   T  + C+    P    SW + GE L  
Sbjct: 293 GVISSSAELRVVASAPDFSKSPMKKLIQVQIGSTVDFECKPKAFPKAKRSWKKGGEQLQ- 351

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                E++    ++D  L I  +  + D   Y C A NQ  T   S  L V+T       
Sbjct: 352 -----ENERISLLKDGGLRIANVT-KGDAGSYTCLATNQFGTARGSTSL-VVTEPTRITL 404

Query: 592 RPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE------NGNL 643
            P   +   GE  +V + C  +  P     F W  +G +         FE      +G+L
Sbjct: 405 APSNMDVTVGE--SVVLPCQVQHDPLLDISFTWYFNGTLTDFQRDASHFEKVGGSASGDL 462

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I  +    SG Y C          S   LIV   P   E +  ++        Q+    
Sbjct: 463 MIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHV--RVDEVTDTTAQISWQE 520

Query: 704 HTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
            T+    V    I       +G      +  P++ IDG     T        EYE  V +
Sbjct: 521 GTDNHSPVTTYSIQARTPFSVGWQRATTV--PDV-IDGKTFTSTVVDLNPWVEYEFRVVA 577

Query: 762 T--VG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP 807
           T  +G         K+ T+  V    P  + GG       ++   I W    +   NG  
Sbjct: 578 TNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGG----SRSELVITWDPVPEELQNGEG 633

Query: 808 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
              Y +  R +  +TW  +   V   +  RY  R E+     ++P+S YE KV   N  G
Sbjct: 634 F-GYVVAFRPSGTTTW--IQTVVTSPDTPRYVFRNES-----ILPFSPYEVKVGVYNNKG 685

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            G P S      +  ++P  APS +         + +SW  +P +  N   + Y++ +  
Sbjct: 686 EG-PFSAVATVFSAEEEPSTAPSGVSATSLSSSAIQVSWTAIPWKMSNGRLLGYEVRYWN 744

Query: 928 KNDTEFQSETLKEYGN-VGIAVVRIPSEF-YYTEYEVKVQAINDVGPGP 974
           K   E  S  +K  GN   I +  + S   YYT     V+A N  G GP
Sbjct: 745 KGQKEESSNRVKAAGNETSIKITGLRSNLAYYT----AVRAYNSAGAGP 789



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/383 (21%), Positives = 143/383 (37%), Gaps = 45/383 (11%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVEDRG 270
           + L C+A G P P   W + D +          P   K   L   N +I  P  Q ED G
Sbjct: 145 VKLECFALGNPVPQINWRRTDGL----------PFPSK-IKLRKSNGMIEIPNFQQEDAG 193

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYY 329
            Y C   N  G  I+      +         +  E+  ++    ++ D   +  P  +Y 
Sbjct: 194 LYECITENSRGKNIARGRLTYYAKPHWIQTIKDMEVAVED---TLYWDCRASGKPKPSYR 250

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++     +E   ++    +GAL  S L   D+G Y C  ++K      +G        
Sbjct: 251 WLKNGEQLAIEGRIQI---ENGALTISNLNLTDSGRYQCIAENK------HGVI------ 295

Query: 390 PHSNFQQLKFPNNFPKTFPEAP-------KAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
             S+  +L+   + P  F ++P       + G  V  EC    +P    +W + G  L  
Sbjct: 296 --SSSAELRVVASAPD-FSKSPMKKLIQVQIGSTVDFECKPKAFPKAKRSWKKGGEQLQE 352

Query: 443 NAYFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
           N       +  L I NV   D G Y C A+N       S ++ +      T+  ++  + 
Sbjct: 353 NERISLLKDGGLRIANVTKGDAGSYTCLATNQFGTARGSTSLVVTEPTRITLAPSNMDVT 412

Query: 502 NQADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
               +   C+    P  D++++W+ NG L + +      +         L IR +  +  
Sbjct: 413 VGESVVLPCQVQHDPLLDISFTWYFNGTLTDFQRDASHFEKVGGSASGDLMIRNIQLKHS 472

Query: 560 PAMYQCRAKNQLKTRYSSAQLRV 582
              Y C  K ++ +  S+A L V
Sbjct: 473 -GKYVCMVKTEVDSVASAADLIV 494



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 121/304 (39%), Gaps = 35/304 (11%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCK 275
           C A G P PSY W K     ++L         + R  +  G L I++   + D G Y C 
Sbjct: 239 CRASGKPKPSYRWLKNG---EQLAI-------EGRIQIENGALTISN-LNLTDSGRYQCI 287

Query: 276 ASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAM-FCDPPTNYPGVNYYWARDY 334
           A NK G I S +         +F+     ++     G  + F   P  +P     W +  
Sbjct: 288 AENKHGVISSSAELRVVASAPDFSKSPMKKLIQVQIGSTVDFECKPKAFPKAKRSWKKG- 346

Query: 335 FPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF 394
               ++E++R+ +  DG L  + + + DAG+Y+C   ++   T R        V      
Sbjct: 347 -GEQLQENERISLLKDGGLRIANVTKGDAGSYTCLATNQFG-TARGSTSL---VVTEPTR 401

Query: 395 QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRNAYFENFNRI 452
             L  P+N   T       G+ V L C     P+   S+ W   G+         +F ++
Sbjct: 402 ITLA-PSNMDVTV------GESVVLPCQVQHDPLLDISFTWYFNGTLTDFQRDASHFEKV 454

Query: 453 -------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL-TDKHMDNQA 504
                  L I N++++  G+Y+C    +  ++ S+  + ++  P     +  D+  D  A
Sbjct: 455 GGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEVTDTTA 514

Query: 505 DLTW 508
            ++W
Sbjct: 515 QISW 518


>gi|119585939|gb|EAW65535.1| contactin 3 (plasmacytoma associated) [Homo sapiens]
          Length = 901

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 222/672 (33%), Positives = 330/672 (49%), Gaps = 23/672 (3%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY S +E  D GNY+C V
Sbjct: 12  GVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVV 71

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
            S V++    G   PL +       +   K    FP+T P A   G  V+LEC A G P+
Sbjct: 72  TSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFALGNPI 129

Query: 429 PSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           P  NW R  G P         F+ +L IPN + ED G Y C A N R    +   ++  A
Sbjct: 130 PQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYA 189

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           +P++   + D  +  +  L W C A G P  +Y W +NG  L  E       +R  I++ 
Sbjct: 190 KPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERTQIENG 242

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            LTI  L+   D  M+QC A+N+    YSSA+L+V+   P F K P++       G  V+
Sbjct: 243 ALTISNLS-VTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVS 301

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
           + C P A+P+    WKK    +    R  +  +G L I+ V++ D+G Y+C A N  G  
Sbjct: 302 LDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGKA 361

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMD 726
                L+V   P+     P  + ++   ++ L C    + LLD+ + W  NG       D
Sbjct: 362 NGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKD 420

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
            +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P  V+V
Sbjct: 421 GSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKV 479

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            E+  T+A + W +G  N  P+  Y I ART ++  W  V+   + + +D   G+   + 
Sbjct: 480 DEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTAT 534

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              L PW  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +L I+W
Sbjct: 535 VVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITW 594

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           +P+P E QN     Y + +R    T +  +T+    +    V R  S   Y+ YEVKV  
Sbjct: 595 DPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGV 653

Query: 967 INDVGPGPESEV 978
            N+ G GP S V
Sbjct: 654 YNNKGEGPFSPV 665



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 158/657 (24%), Positives = 244/657 (37%), Gaps = 76/657 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 151 FSGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEI----- 202

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 203 ---AVEDSLYWECRASGKPKPSYRWLKNGAALVLEERTQIENGALTISNLSVTDSGMFQC 259

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 260 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-KK 318

Query: 526 GELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           G++       +++ +R   + D  L I  +  + D   Y C A+NQ      +  L V+T
Sbjct: 319 GDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVT 370

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGG 633
                   P   +   GE  +V + C  +  P     F W         KKDG+     G
Sbjct: 371 EPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVG 428

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
                 +G+L+I  +    SG Y C          S   LIV   P   E +        
Sbjct: 429 GSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDT 485

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
              L  +        +    I       +G   +  +  P + IDG     T        
Sbjct: 486 TAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWV 542

Query: 754 EYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT--- 799
           EYE   V  + +G         K+ T+  V    P  + GG       ++   I W    
Sbjct: 543 EYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVP 598

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +   NG     Y +  R    +TW  +   V   +  RY  R E+     +VP+S YE K
Sbjct: 599 EELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVK 650

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           V   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   +
Sbjct: 651 VGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLL 709

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
            Y++ +      E  S  +K  GN   A +R + S   YYT     V+A N  G GP
Sbjct: 710 GYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGP 762



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 131/333 (39%), Gaps = 46/333 (13%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P++++   DV     + ++ + +   C A G P PSY W K          N    + ++
Sbjct: 191 PHWVQLIKDV-----EIAVEDSLYWECRASGKPKPSYRWLK----------NGAALVLEE 235

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           R  +  G L I++   V D G + C A NK G + S +         +F+     ++   
Sbjct: 236 RTQIENGALTISN-LSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQV 294

Query: 310 NWGKAMFCD-PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
             G  +  D  P   P     W +      V+E +R+ +  DG L  + + + DAG Y+C
Sbjct: 295 QVGSLVSLDCKPRASPRALSSWKKGDVS--VQEHERISLLNDGGLKIANVTKADAGTYTC 352

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
             +++      NG    +   P    +    P+N   +       G+ V L C     P+
Sbjct: 353 MAENQFGKA--NGTTHLVVTEPT---RITLAPSNMDVSV------GESVILPCQVQHDPL 401

Query: 429 PS--YNWTRRGSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALES 479
               + W   G+         +F ++       L I N++++  G+Y+C       ++ S
Sbjct: 402 LDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSS 461

Query: 480 SVTISIQAEP----NFTIPLTDKHMDNQADLTW 508
           +  + ++  P    N  +   D+  D  A L+W
Sbjct: 462 AADLIVRGSPGPPENVKV---DEITDTTAQLSW 491



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 124/324 (38%), Gaps = 30/324 (9%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P   W + D +          P S K +     G L I + +Q ED G
Sbjct: 118 VKLECFALGNPIPQINWRRSDGL----------PFSSKIKLRKFSGVLEIPNFQQ-EDAG 166

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYY 329
           SY C A N  G  ++      +       L +  EI  ++   +++ +   +  P  +Y 
Sbjct: 167 SYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVED---SLYWECRASGKPKPSYR 223

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++     +EE  ++    +GAL  S L   D+G + C  ++K    G       LKV 
Sbjct: 224 WLKNGAALVLEERTQI---ENGALTISNLSVTDSGMFQCIAENK---HGLVYSSAELKVV 277

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF 449
             +      F  N  K   +  + G  V L+C     P    +W +    +  +      
Sbjct: 278 ASAP----DFSKNPMKKLVQV-QVGSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLL 332

Query: 450 NR-ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTW 508
           N   L I NV   D G Y C A N       +  + +      T+  ++  +     +  
Sbjct: 333 NDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVIL 392

Query: 509 TCEAFGVP--DVTYSWFRNGELLN 530
            C+    P  D+ ++W+ NG L +
Sbjct: 393 PCQVQHDPLLDIIFTWYFNGALAD 416


>gi|345797925|ref|XP_003434377.1| PREDICTED: contactin-2 [Canis lupus familiaris]
          Length = 1016

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 255/729 (34%), Positives = 353/729 (48%), Gaps = 41/729 (5%)

Query: 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPP 320
           +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   ++ WG  + C+PP
Sbjct: 75  NPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPP 134

Query: 321 TNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGR 379
            +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNYSC   S +     
Sbjct: 135 AHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMD---- 190

Query: 380 NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDKVRLECVAFGYPVP 429
              F    VF  S F QL       + F  + KA          G +V LEC AFG PVP
Sbjct: 191 ---FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVP 245

Query: 430 SYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
              W +  GS  P+ A  E     L IP++  ED+G Y C A N +        I +QA+
Sbjct: 246 QIKWRKVDGSLSPQWATAEP---TLQIPSISFEDEGTYECEAENSKGRDTVQGRIIVQAQ 302

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P +   ++D   D  ++L W C A G P  T  W RNGE       PL  Q R  +    
Sbjct: 303 PEWLKVISDMEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLTSQSRVEVLAGD 355

Query: 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
           L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P++    A  GG + I
Sbjct: 356 LRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVKRLIPAARGGEIAI 414

Query: 609 FCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 668
            C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G Y+C A N  G   
Sbjct: 415 PCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKAN 474

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDL 727
           S G L V    +     P    I    +L L+C A  +  +D+ +IWT +   I  +   
Sbjct: 475 STGILSVRDA-TKITLAPSSADINLGDSLTLQCHASHDPTMDLTFIWTLDDFPIDFDKPG 533

Query: 728 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
                 +     G L I NA     G+Y C+ ++ V   S + TV+V GPPG PGGV V 
Sbjct: 534 GHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVR 593

Query: 788 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            +  T+  + W+ G  N  PI  Y + ART     W  V  +    E     G  E +  
Sbjct: 594 NIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQV 648

Query: 848 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
             L PW  YEF+V+A N LG GEPS PS +  T    P  APS + GGGG  G+L ++W 
Sbjct: 649 LGLTPWMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELILNWT 708

Query: 908 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
           P+PRE QN     Y + +R++  + +Q+  +    +    V    S   YT +EVK+++ 
Sbjct: 709 PVPREYQNGDGFGYLLSFRRQGGSGWQTARVPG-ADAQHFVYSNDSVRPYTPFEVKIRSY 767

Query: 968 NDVGPGPES 976
           N  G GPES
Sbjct: 768 NRRGDGPES 776



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 141/371 (38%), Gaps = 52/371 (14%)

Query: 133 YSFSQSLKRWGFERVTG-MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPY 191
           ++F   + +  + +V G + P     E ++Q       D+ TY+   +        +G  
Sbjct: 238 FAFGNPVPQIKWRKVDGSLSPQWATAEPTLQIPSISFEDEGTYECEAENSKGRDTVQGRI 297

Query: 192 FIK-QP--TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL-S 247
            ++ QP    V+ D+ +  I +++   C A G P P+  W +             +PL S
Sbjct: 298 IVQAQPEWLKVISDM-EADIGSNLRWGCAAAGKPRPTVRWLRNG-----------EPLTS 345

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
             R  +  G+L  +    +ED G Y C A NK G+I + +         +F L     + 
Sbjct: 346 QSRVEVLAGDLRFSK-LSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVKRLI 404

Query: 308 NQNWGK--AMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 365
               G   A+ C  P   P     W++      +    RV V+ DG L    + + D G 
Sbjct: 405 PAARGGEIAIPCQ-PRAAPKAVVLWSKGT--EILVNSSRVTVTPDGTLIIRNISRSDEGK 461

Query: 366 YSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECV 422
           Y+C   N   K + TG        K+    +   +                GD + L+C 
Sbjct: 462 YTCFAENFMGKANSTGILSVRDATKITLAPSSADINL--------------GDSLTLQCH 507

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASN 472
           A   P    ++ WT    P+  +    ++ R         LTI N ++   G+Y C A  
Sbjct: 508 ASHDPTMDLTFIWTLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQT 567

Query: 473 --DRSALESSV 481
             D ++ E++V
Sbjct: 568 VVDSASKEATV 578



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 141/376 (37%), Gaps = 37/376 (9%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           +TL C+A G P P  +W K D        +L    +    TL   ++        ED G+
Sbjct: 233 VTLECFAFGNPVPQIKWRKVD-------GSLSPQWATAEPTLQIPSI------SFEDEGT 279

Query: 272 YHCKASNKFGSIISES---VQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNY 328
           Y C+A N  G    +    VQ    ++   +   A    N  WG A    P    P V  
Sbjct: 280 YECEAENSKGRDTVQGRIIVQAQPEWLKVISDMEADIGSNLRWGCAAAGKP---RPTVR- 335

Query: 329 YWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
            W R+  P  +    RV V   G L FS L   D+G Y C  ++K      +       +
Sbjct: 336 -WLRNGEP--LTSQSRVEV-LAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL 391

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE- 447
            P      +K      +  P A   G ++ + C     P     W++    L  ++    
Sbjct: 392 APDFRLNPVK------RLIPAA--RGGEIAIPCQPRAAPKAVVLWSKGTEILVNSSRVTV 443

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
             +  L I N+   D+G+Y C A N      S+  +S++     T+  +   ++    LT
Sbjct: 444 TPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDSLT 503

Query: 508 WTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQ 564
             C A   P  D+T+ W  +   ++ +  P     R   ++ V  +  LN + R    Y 
Sbjct: 504 LQCHASHDPTMDLTFIWTLDDFPIDFDK-PGGHYRRASAKETVGDLTILNAQLRHGGKYT 562

Query: 565 CRAKNQLKTRYSSAQL 580
           C A+  + +    A +
Sbjct: 563 CMAQTVVDSASKEATV 578



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +   ++  ++P  AP+++   G    +++++WEP+ +
Sbjct: 756 PYTPFEVKIRSYNRRGDG-PESLTALVHSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 813

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V ++A N  G
Sbjct: 814 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVTGLHPDTKYHVTIRAYNRAG 871

Query: 972 PGPES 976
            GP S
Sbjct: 872 TGPTS 876


>gi|351709949|gb|EHB12868.1| Contactin-5, partial [Heterocephalus glaber]
          Length = 922

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 219/672 (32%), Positives = 323/672 (48%), Gaps = 23/672 (3%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y C V
Sbjct: 34  GVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLV 93

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
           ++ V++     P  PL +       +   K   +FP T   A   G  V++EC A G PV
Sbjct: 94  KNTVTNARVLSPPTPLTLRDDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFALGNPV 151

Query: 429 PSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
           P+  W +    +P  +       +L IPNV+++D G Y CRA N R        + I   
Sbjct: 152 PTITWMKANGYIPGKSRLRKSQAVLEIPNVQLDDAGIYECRAENARGKNSFRGQLQIYTY 211

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P++   L D  +D+ + L W C+A G P  TY W +NG       +PL  Q+R    + V
Sbjct: 212 PHWVEKLNDTQLDSGSALQWECKATGKPRPTYRWLKNG-------VPLLPQNRVNTANGV 264

Query: 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
           L I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +   V I
Sbjct: 265 LMIHSVN-QSDSGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKNREVII 323

Query: 609 FCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 668
            C P+ +PKP   WKK    +    R  I  +GNL I   S+ D G Y C   N+ G  E
Sbjct: 324 ECKPQGSPKPNISWKKGDKAVRENKRLAILPDGNLRILNASKSDEGNYVCKGENIFGSAE 383

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDL 727
               + V   P+  E  P +  +    ++ L C A  +  LDV + WT  G  I    + 
Sbjct: 384 IVASVSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVNFYWTLKGQPIDFEKEG 442

Query: 728 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
              E          L I N     AG Y C V++T   +S +  ++V GPPG PG V V 
Sbjct: 443 GHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVE 502

Query: 788 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASI 846
           E+ +++AT+ W+  A N  PI+ Y + AR+ ++  W  V      K V +  TG  E+++
Sbjct: 503 EITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTV------KTVPETITGDMESAM 556

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              L PW  YEF+V+A N +G G+PS+PS    T    P  AP+ + G  G+  +L I+W
Sbjct: 557 AVDLNPWVEYEFRVVATNPIGTGDPSTPSRLIRTNEAVPKIAPTNVSGRSGRRHELVIAW 616

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           EP+  E QN     Y + +R  N T    E +         + R  S    T +EVKV  
Sbjct: 617 EPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGV 675

Query: 967 INDVGPGPESEV 978
            N+ G GP S++
Sbjct: 676 YNNKGDGPFSQI 687



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 129/341 (37%), Gaps = 53/341 (15%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P+++++  D   D       + +   C A G P P+Y W K          N +  L   
Sbjct: 212 PHWVEKLNDTQLDSG-----SALQWECKATGKPRPTYRWLK----------NGVPLLPQN 256

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE--IG 307
           R   + G L+I+   Q  D G Y C A NK+G+I + +          F L +  +  I 
Sbjct: 257 RVNTANGVLMIHSVNQ-SDSGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIV 315

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
            +N    + C  P   P  N  W +      V E+KR+ +  DG L      + D GNY 
Sbjct: 316 TKNREVIIECK-PQGSPKPNISWKKG--DKAVRENKRLAILPDGNLRILNASKSDEGNYV 372

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-----AGDKVRLECV 422
           C         G N  F   ++    + ++       P      PK      G+ + L C 
Sbjct: 373 CK--------GEN-IFGSAEIVASVSVKE-------PTRIELTPKRTELTVGESIVLNCK 416

Query: 423 AFGYPVPSYN--WTRRGSPL---PRNAYFENF-----NRILTIPNVKVEDQGEYICRASN 472
           A        N  WT +G P+       +FEN      +  L I N+ +   G Y CR   
Sbjct: 417 AIHDASLDVNFYWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQT 476

Query: 473 DRSALESSVTISIQAEPN-FTIPLTDKHMDNQADLTWTCEA 512
              ++     + ++  P    I + ++  ++ A L+W+  A
Sbjct: 477 TADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPAA 517



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 129/336 (38%), Gaps = 51/336 (15%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVEDRG 270
           + + C+A G P P+  W K         AN   P   +   L     ++  P  Q++D G
Sbjct: 140 VKMECFALGNPVPTITWMK---------ANGYIPGKSR---LRKSQAVLEIPNVQLDDAG 187

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ------NWGKAMFCD-PPTNY 323
            Y C+A N  G            F G+  +   P    +      + G A+  +   T  
Sbjct: 188 IYECRAENARGK---------NSFRGQLQIYTYPHWVEKLNDTQLDSGSALQWECKATGK 238

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P   Y W ++  P   +   RV  + +G L   ++ Q D+G Y C  ++K      +   
Sbjct: 239 PRPTYRWLKNGVPLLPQ--NRVNTA-NGVLMIHSVNQSDSGMYQCLAENKYGAIYASAEL 295

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
             L   P     QLK      KT         +V +EC   G P P+ +W +    +  N
Sbjct: 296 KILASAPTFALNQLK------KTI--IVTKNREVIIECKPQGSPKPNISWKKGDKAVREN 347

Query: 444 ---AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
              A   + N  L I N    D+G Y+C+  N   + E   ++S++ EP   I LT K  
Sbjct: 348 KRLAILPDGN--LRILNASKSDEGNYVCKGENIFGSAEIVASVSVK-EPT-RIELTPKRT 403

Query: 501 DNQA--DLTWTCEAF--GVPDVTYSWFRNGELLNSE 532
           +      +   C+A      DV + W   G+ ++ E
Sbjct: 404 ELTVGESIVLNCKAIHDASLDVNFYWTLKGQPIDFE 439


>gi|344235922|gb|EGV92025.1| Contactin-4 [Cricetulus griseus]
          Length = 822

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 219/645 (33%), Positives = 322/645 (49%), Gaps = 24/645 (3%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY+C V + V++    GP  
Sbjct: 25  LSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPT 82

Query: 385 PLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLP 441
           PL +       +   K    FP+T P   + G  V+LEC A G PVP+  W R  G P+ 
Sbjct: 83  PLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFALGNPVPTILWRRADGKPIA 140

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
           R A     + IL IPN + ED G Y C A N R    +   +   A+PN+   + D H+ 
Sbjct: 141 RKARRHKSDGILEIPNFQQEDAGSYECVAENSRGKNIAKGQLIFYAQPNWVQKINDIHVA 200

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
            +  + W C+A G P  TY W +NG+       PL  +DR  I+   L I  +N   D  
Sbjct: 201 MEESVFWECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAG 252

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           MYQC A+N+    +SSA+L V+   P F +  L+  T    GG V I C P+A+P+P + 
Sbjct: 253 MYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVIIECKPKASPRPVYT 312

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           W+K   I+    R  I E+GNL I  V++ D+G Y+C ATN  G   S G +IV   P+ 
Sbjct: 313 WRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIV-KDPTK 371

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGG 740
               P  + +    ++ L C    +  LD+ + W+ NG  I  + D +  E        G
Sbjct: 372 VMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAG 431

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
            L I N     AG+Y C+V+++V K++    +IV GPPG P  V + E+  T+A + W  
Sbjct: 432 DLMIRNIQLKHAGKYVCMVQTSVDKLTAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRP 491

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
           G  N  PIT Y I ART ++  W  VS   + + VD   G+   +    L PW  YEF+ 
Sbjct: 492 GPDNHSPITMYVIQARTPFSVGWQAVS--TVPELVD---GKTFTATVVGLNPWVEYEFRT 546

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G GEPS PS +  T    P   P+ + GGGG   +L I+WE +P E QN     
Sbjct: 547 VAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFG 606

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
           Y + +R      +    L    +    V R  S   ++ +EVKV+
Sbjct: 607 YVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVK 650



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 156/392 (39%), Gaps = 62/392 (15%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 115 VKLECFALGNPVPTILWRRADG----------KPIARKARRHKSDGILEIPNFQQ-EDAG 163

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFN-LKRAPEIGNQNWGKAMFCDPPTN-YP 324
           SY C A N  G  I++  QL F     ++ + N +  A E       +++F +   N  P
Sbjct: 164 SYECVAENSRGKNIAKG-QLIFYAQPNWVQKINDIHVAME-------ESVFWECKANGRP 215

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
              Y W ++  P    +  ++     G L  + +   DAG Y C  ++K           
Sbjct: 216 KPTYRWLKNGDPLLTRDRIQI---EQGTLNITIVNLSDAGMYQCVAENKHG--------- 263

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPE---APKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
              +F  +    +    +F +T  +     K G +V +EC     P P Y W R+G  + 
Sbjct: 264 --VIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVIIECKPKASPRPVYTW-RKGREIL 320

Query: 442 RN----AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD 497
           R        E+ N  L I NV   D G Y C A+N      S+  + ++      +P + 
Sbjct: 321 RENERITISEDGN--LRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSS 378

Query: 498 KHMDNQADLTWTCEAF--GVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNV--LT 550
             +     +   C+       D+ ++W  NG L++ +    +D D   R   QD+   L 
Sbjct: 379 MDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFD----KDGDHFERVGGQDSAGDLM 434

Query: 551 IRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
           IR +   +    Y C  +  +    ++A L V
Sbjct: 435 IRNIQ-LKHAGKYVCMVQTSVDKLTAAADLIV 465


>gi|402859578|ref|XP_003894229.1| PREDICTED: contactin-3-like, partial [Papio anubis]
          Length = 832

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 218/658 (33%), Positives = 325/658 (49%), Gaps = 23/658 (3%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           ++Y W  + +P+FVEED R FVS + G LY S +E  D GNY+C V S V++    G   
Sbjct: 146 LSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPT 205

Query: 385 PLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLP 441
           PL +       +   K    FP+T P A   G  V+LEC A G P+P  NW R  G P  
Sbjct: 206 PLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFALGNPIPQINWRRSDGLPFS 263

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
                  FN +L IPN + ED G Y C A N R    +   ++  A+P++   + D    
Sbjct: 264 SKIKLRKFNGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVETA 323

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
            +  L W C A G P  +Y W +NG  L  E       +R  I++  LTI  L+   D  
Sbjct: 324 VEDSLYWECRASGKPKPSYRWLKNGAALVLE-------ERIQIENGALTISNLS-VTDSG 375

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           M+QC A+N+    YSSA+L+V+   P F K P++       G  V++ C P A+P+ +  
Sbjct: 376 MFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSS 435

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           WKK    +    R  + ++G L I+ V++ D+G Y+C A N  G       L+V   P+ 
Sbjct: 436 WKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTR 494

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGG 740
               P  + ++   ++ L C    + LLD+ + W  NG       D +  E    +  G 
Sbjct: 495 ITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGD 554

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
           L+ I N     +G+Y C+V++ V  +S+   +IV G PG P  V+V E+  T+A + W +
Sbjct: 555 LM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKE 613

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
           G  N  P+  Y I ART ++  W  ++   + + +D   G+   +    L PW  YEF+V
Sbjct: 614 GKDNHSPVISYSIQARTPFSVGWQTIT--TVPEVID---GKTHTATVVELNPWVEYEFRV 668

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N++G GEPS PS +  T    P   PS + GGGG   +L I+W+P+P E QN     
Sbjct: 669 VASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFG 728

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           Y + +R    T +  +T+    +    V R  S   Y+ YEVKV   N+ G GP S V
Sbjct: 729 YVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPV 785



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 143/602 (23%), Positives = 222/602 (36%), Gaps = 68/602 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           ++G L     +Q DAG+Y C  ++     G+N     L  +   ++ QL       K   
Sbjct: 271 FNGVLEIPNFQQEDAGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLI------KDVE 321

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            A +  D +  EC A G P PSY W + G+ L      +  N  LTI N+ V D G + C
Sbjct: 322 TAVE--DSLYWECRASGKPKPSYRWLKNGAALVLEERIQIENGALTISNLSVTDSGMFQC 379

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q    ++  C+    P    SW + 
Sbjct: 380 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-KK 438

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           G++   E   +       ++D  L I  +  + D   Y C A+NQ      +  L V+T 
Sbjct: 439 GDVSVQEHARIS-----LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTE 491

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW---------KKDGNIIGSGGR 634
                  P   +   GE  +V + C  +  P     F W         KKDG+     G 
Sbjct: 492 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGG 549

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                +G+L+I  +    SG Y C          S   LIV   P   E +         
Sbjct: 550 SS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTT 606

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             L  +        +    I       +G   +  +  P + IDG     T        E
Sbjct: 607 AQLSWKEGKDNHSPVISYSIQARTPFSVGWQTITTV--PEV-IDGKTHTATVVELNPWVE 663

Query: 755 YE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---D 800
           YE   V  + +G         K+ T+  V    P  + GG       ++   I W    +
Sbjct: 664 YEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPE 719

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
              NG     Y +  R    +TW      V   +  RY  R E+     +VP+S YE KV
Sbjct: 720 ELQNGEGF-GYVVAFRPLGVTTWIQTV--VTSPDTPRYVFRNES-----IVPYSPYEVKV 771

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
              N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   + 
Sbjct: 772 GVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLG 830

Query: 921 YK 922
           Y+
Sbjct: 831 YE 832



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 130/333 (39%), Gaps = 46/333 (13%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P++++   DV     + ++ + +   C A G P PSY W K          N    + ++
Sbjct: 311 PHWVQLIKDV-----ETAVEDSLYWECRASGKPKPSYRWLK----------NGAALVLEE 355

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           R  +  G L I++   V D G + C A NK G + S +         +F+     ++   
Sbjct: 356 RIQIENGALTISN-LSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQV 414

Query: 310 NWGKAMFCD-PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
             G  +  D  P   P     W +      V+E  R+ +  DG L  + + + DAG Y+C
Sbjct: 415 QVGSLVSLDCKPRASPRARSSWKKGDVS--VQEHARISLLKDGGLKIANVTKADAGTYTC 472

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
             +++      NG    +   P    +    P+N   +       G+ V L C     P+
Sbjct: 473 MAENQFGKA--NGTTHLVVTEPT---RITLAPSNMDVS------VGESVILPCQVQHDPL 521

Query: 429 PS--YNWTRRGSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALES 479
               + W   G+         +F ++       L I N++++  G+Y+C       ++ S
Sbjct: 522 LDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSS 581

Query: 480 SVTISIQAEP----NFTIPLTDKHMDNQADLTW 508
           +  + ++  P    N  +   D+  D  A L+W
Sbjct: 582 AADLIVRGSPGPPENVKV---DEITDTTAQLSW 611



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 124/326 (38%), Gaps = 30/326 (9%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P P   W + D +          P S K   L   N ++  P  Q ED
Sbjct: 236 STVKLECFALGNPIPQINWRRSDGL----------PFSSK-IKLRKFNGVLEIPNFQQED 284

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVN 327
            GSY C A N  G  ++      +       L +  E   ++   +++ +   +  P  +
Sbjct: 285 AGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVETAVED---SLYWECRASGKPKPS 341

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
           Y W ++     +EE  ++    +GAL  S L   D+G + C  ++K    G       LK
Sbjct: 342 YRWLKNGAALVLEERIQI---ENGALTISNLSVTDSGMFQCIAENK---HGLVYSSAELK 395

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
           V   +      F  N  K   +  + G  V L+C     P    +W +    +  +A   
Sbjct: 396 VVASAP----DFSKNPMKKLVQV-QVGSLVSLDCKPRASPRARSSWKKGDVSVQEHARIS 450

Query: 448 NF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
              +  L I NV   D G Y C A N       +  + +      T+  ++  +     +
Sbjct: 451 LLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESV 510

Query: 507 TWTCEAFGVP--DVTYSWFRNGELLN 530
              C+    P  D+ ++W+ NG L +
Sbjct: 511 ILPCQVQHDPLLDIIFTWYFNGALAD 536


>gi|351706113|gb|EHB09032.1| Contactin-6 [Heterocephalus glaber]
          Length = 980

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 221/660 (33%), Positives = 328/660 (49%), Gaps = 27/660 (4%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           ++Y W  +  P +V+ED R FVS + G LY + +E  D GNY+C V +K +     GP  
Sbjct: 104 LSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFVTNKEAQRSVQGPPT 163

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFGYPVPSYNWTRR-GSPLP 441
           PL     ++    ++       FPE  +A     V+LEC A G PVP  +W R  GSPLP
Sbjct: 164 PL--VQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLP 221

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
           R   +     IL IPN + ED+G Y C A N R    +   +   A P +   + + ++ 
Sbjct: 222 RKIKYSKSQAILEIPNFQQEDEGFYECLAGNLRGRNLAKGQLIFYAPPEWEHKIQNTYLS 281

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
              +L W C+A G P+  Y+W +NGE LNSE       +R  I++  LTI  LN   D  
Sbjct: 282 IYDNLYWECKASGKPNPWYTWLKNGERLNSE-------ERIQIENGTLTITILNVS-DSG 333

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           +YQC A+N+ +  Y++A+LRVL   P F K P++  +    GG+++I C P A P+    
Sbjct: 334 VYQCAAENKYQIIYANAELRVLASAPDFSKSPIKKISIVQIGGDISIECKPNAFPRAAIS 393

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           WK+    +    R  + E+G+L I  V+R D+G Y+C ATN  G+ ++ G LIV    + 
Sbjct: 394 WKRGSESLRQSKRVFLLEDGSLKIHNVTRSDAGPYTCIATNQFGIAKNTGSLIVKER-TI 452

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-- 739
               P K+ +    ++ L C    +  ++V + W+ NG  I   DL +       I G  
Sbjct: 453 ITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFAWSFNGNII---DLQKQVAHFEKIGGES 509

Query: 740 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
            G L I N   + +G+Y C V++T+ ++S    +IV GPPG P  V+V  +  T++ I W
Sbjct: 510 VGDLMIRNIQLSHSGKYLCTVRTTLERLSAVADIIVRGPPGPPEDVRVEHISSTTSQISW 569

Query: 799 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
             G  N  PI  + +  RT ++  W       +    +   G+   +    L  W  YEF
Sbjct: 570 RPGPDNNSPIQIFTVQTRTPFSVGW-----QAVATVPEILNGQTYNATVVGLSSWVEYEF 624

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           +V+AGN +G GEPS PS    T A  P  AP  I GGGG   +L I+WE +P E QN   
Sbjct: 625 RVVAGNSIGIGEPSKPSKLLRTKASVPVLAPVNINGGGGGRYELVITWESIPEELQNGEG 684

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             Y + +R    T +  E +    +    V R  S    + +EVKV   N+ G GP S V
Sbjct: 685 FGYIVMFRPVGSTAWTKERVPLVESSKF-VYRNESIMPLSPFEVKVGVYNNEGEGPLSTV 743



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 180/797 (22%), Positives = 287/797 (36%), Gaps = 104/797 (13%)

Query: 225 SYEWFKED---YVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNKF 280
           SY W   D   YVQ+           ++RF +   GNL I    +  D G+Y C  +NK 
Sbjct: 105 SYAWTFNDNPLYVQE----------DNRRFVSQETGNLYIAK-VEPSDVGNYTCFVTNKE 153

Query: 281 GSIISES-----VQLAFGFIGEFNLK---RAPEI--GNQNWGKAMFCDPPTNYPGVNYYW 330
                +      VQ   G +GE+  K   R PE     ++    + C    N P  +  W
Sbjct: 154 AQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGN-PVPDISW 212

Query: 331 AR---DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            R      P  ++  K         L     +Q D G Y C   +     GRN     L 
Sbjct: 213 RRLDGSPLPRKIKYSKS-----QAILEIPNFQQEDEGFYECLAGNL---RGRNLAKGQLI 264

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
            +    ++  K  N +   +       D +  EC A G P P Y W + G  L      +
Sbjct: 265 FYAPPEWEH-KIQNTYLSIY-------DNLYWECKASGKPNPWYTWLKNGERLNSEERIQ 316

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--A 504
             N  LTI  + V D G Y C A N    + ++  + + A  P+F+     K    Q   
Sbjct: 317 IENGTLTITILNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPIKKISIVQIGG 376

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D++  C+    P    SW R  E L       + +  + ++D  L I  +    D   Y 
Sbjct: 377 DISIECKPNAFPRAAISWKRGSESLR------QSKRVFLLEDGSLKIHNVT-RSDAGPYT 429

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 622
           C A NQ     ++  L ++  +      P + +   GE  ++ + C     P  +  F W
Sbjct: 430 CIATNQFGIAKNTGSL-IVKERTIITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFAW 486

Query: 623 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             +GNII    +   FE       G+L+I  +    SG Y CT         +   +IV 
Sbjct: 487 SFNGNIIDLQKQVAHFEKIGGESVGDLMIRNIQLSHSGKYLCTVRTTLERLSAVADIIVR 546

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
             P   E +  +   +    +  R        + +  + T     +G   +  +  P I 
Sbjct: 547 GPPGPPEDVRVEHISSTTSQISWRPGPDNNSPIQIFTVQTRTPFSVGWQAVATV--PEI- 603

Query: 737 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 785
           ++G     T    +   EYE   V  +++G          + TK +V V  P  + GG  
Sbjct: 604 LNGQTYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSKLLRTKASVPVLAPVNINGGGG 663

Query: 786 VVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839
                +    I W    +   NG     I  ++ +  T W        E V   E  ++ 
Sbjct: 664 ----GRYELVITWESIPEELQNGEGFGYIVMFRPVGSTAWTK------ERVPLVESSKFV 713

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
            R E+     ++P S +E KV   N  G G  S+ S  Y+   D+P  AP          
Sbjct: 714 YRNES-----IMPLSPFEVKVGVYNNEGEGPLSTVSIVYSG-EDEPQLAPRGTSLQSFSA 767

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
            ++ +SW  +   +     + Y++ +   +  E     ++  GNV      I      T 
Sbjct: 768 SEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESIIGKIRVSGNV--TNKSITGLKANTV 825

Query: 960 YEVKVQAINDVGPGPES 976
           Y   V+A N  G GP S
Sbjct: 826 YFASVRAYNTAGTGPSS 842



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 108/297 (36%), Gaps = 42/297 (14%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI +++   C A G PNP Y W K     +RL        S++R  +  G L I     V
Sbjct: 281 SIYDNLYWECKASGKPNPWYTWLKNG---ERLN-------SEERIQIENGTLTITI-LNV 329

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPG 325
            D G Y C A NK+  I + +         +F+     +I     G  +  +  P  +P 
Sbjct: 330 SDSGVYQCAAENKYQIIYANAELRVLASAPDFSKSPIKKISIVQIGGDISIECKPNAFPR 389

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF- 384
               W R      + + KRVF+  DG+L    + + DAG Y+C   ++       G    
Sbjct: 390 AAISWKRG--SESLRQSKRVFLLEDGSLKIHNVTRSDAGPYTCIATNQFGIAKNTGSLIV 447

Query: 385 ---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRRGSP 439
               +   P S                     G+ + L C     P     + W+  G+ 
Sbjct: 448 KERTIITVPPSKMDV---------------TVGESIVLPCQVSHDPSIEVVFAWSFNGNI 492

Query: 440 LPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
           +       +F +I       L I N+++   G+Y+C        L +   I ++  P
Sbjct: 493 IDLQKQVAHFEKIGGESVGDLMIRNIQLSHSGKYLCTVRTTLERLSAVADIIVRGPP 549



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 136/345 (39%), Gaps = 47/345 (13%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P P   W + D            PL  ++   S    I+  P  Q ED
Sbjct: 194 SSVKLECFALGNPVPDISWRRLDG----------SPLP-RKIKYSKSQAILEIPNFQQED 242

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF------CDPPTN 322
            G Y C A N  G  +++  QL F    E+  K       QN   +++      C   + 
Sbjct: 243 EGFYECLAGNLRGRNLAKG-QLIFYAPPEWEHKI------QNTYLSIYDNLYWECK-ASG 294

Query: 323 YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382
            P   Y W ++     +  ++R+ +  +G L  + L   D+G Y C  ++K      N  
Sbjct: 295 KPNPWYTWLKN--GERLNSEERIQIE-NGTLTITILNVSDSGVYQCAAENKYQIIYANAE 351

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
              L   P        F  +  K        GD + +EC    +P  + +W +RGS   R
Sbjct: 352 LRVLASAP-------DFSKSPIKKISIVQIGGD-ISIECKPNAFPRAAISW-KRGSESLR 402

Query: 443 NA--YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
            +   F   +  L I NV   D G Y C A+N     +++ ++ ++     T+P +   +
Sbjct: 403 QSKRVFLLEDGSLKIHNVTRSDAGPYTCIATNQFGIAKNTGSLIVKERTIITVPPSKMDV 462

Query: 501 DNQADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYF 543
                +   C+    P  +V ++W  NG +++     L+ Q  +F
Sbjct: 463 TVGESIVLPCQVSHDPSIEVVFAWSFNGNIID-----LQKQVAHF 502


>gi|348526544|ref|XP_003450779.1| PREDICTED: contactin-1a-like [Oreochromis niloticus]
          Length = 1042

 Score =  338 bits (867), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 243/810 (30%), Positives = 384/810 (47%), Gaps = 46/810 (5%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLV 239
           I   D    GP F ++P DVV+   + S    I+++C A   P  +Y W ++++ + +L+
Sbjct: 28  IYGEDATGYGPIFEEEPVDVVY--IEDSPDGRISMNCRARANPPATYRWRRDNW-EIKLM 84

Query: 240 ANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF- 298
                   D+ ++L GGNL+I +P Q +  G+Y C A N +G++IS+  ++ FGF+GEF 
Sbjct: 85  EQ-----PDEHYSLVGGNLVITNPIQKKHAGTYVCVAKNIYGTVISKEARVKFGFLGEFP 139

Query: 299 NLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSYD-GALYFS 356
           + +R P    +  G  + C PP  +P  V Y W  + FP F+  D+R FVS   G LY +
Sbjct: 140 DEERDPVYVKEGQGAVLLCVPPKAWPQEVTYRWIYNEFPVFLNTDRRRFVSQKTGNLYIA 199

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-GD 415
            +E  DAGNYSC V S V        F PL   P  + ++ K+P +    FP+       
Sbjct: 200 KVEAQDAGNYSCFVSSPVLGKSVFSKFIPLIPLPPDDGEERKYPADIRVKFPDTTAMLAS 259

Query: 416 KVRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
            + LEC A G P+P   W +   + LP N        +L + NV+ ED G Y C A N +
Sbjct: 260 NITLECFALGNPIPHIVWRKVDATDLPANHEISESGAVLHLFNVQYEDVGFYECEAINTK 319

Query: 475 SALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
                   + +++ P +   + +   D  ++ T  C A G P     W+++G +     L
Sbjct: 320 GKDWHKAWLYVESAPEWAETINNTMKDIGSEHTMRCVASGKPFPFIRWYKDGYMYGKGEL 379

Query: 535 PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
                         LT        D  MYQC A+N    +Y++A+LRV+   P+F+  P+
Sbjct: 380 KFSS----------LTFA------DSGMYQCIAENYWGIKYANAELRVIACAPTFEFNPV 423

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 654
           + +    + G V I C P AAP+P+F W K   ++ +  R  I  +G+L I   +++D G
Sbjct: 424 KKQLLGAKDGRVVIECKPRAAPRPRFTWTKGKELLYNSSRISIMFDGSLEILNATKNDEG 483

Query: 655 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
           +Y+C A N  G   S G L +    S     P          + L+C A  + +LD+ +I
Sbjct: 484 VYTCFAENDRGKANSSGYLTITEATS-ITVAPEDTEAKVGDEVILKCEASYDPMLDITFI 542

Query: 715 WTHNGVRIG-NMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
           W  +   I  N +  + E   +N DG G L+I NA     G Y C  ++ V   +    +
Sbjct: 543 WAIDFRVIDFNSEWQQYER-VMNEDGVGDLKILNAQIWHEGRYTCTAQTVVDSDTAYCDL 601

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEH 829
            V G PG PG ++V E+  T   + WT GA +  PI +Y I  R  W      W N S  
Sbjct: 602 KVVGVPGPPGVIRVEEIGDTWVKLWWTKGAEHNSPILYYTIQTRHYWALYEDDWRNASTS 661

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
               +     G  E +    L PW  Y+F++IA NE G GE S PS +  T    P  +P
Sbjct: 662 PTVLD-----GSMERAEVTDLYPWMEYQFRIIATNEYGSGEASIPSLKIKTWDAPPVVSP 716

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE---YGNVGI 946
           + + G GG+ G++ I+W P+           Y + ++  +  ++  ET+ +     +V  
Sbjct: 717 TNLAGYGGRNGEIIITWTPVEPWYFYGKKFGYIVAFKPHDAYDWWYETISDPETRRHVHR 776

Query: 947 AVVRIPSE--FYYTEYEVKVQAINDVGPGP 974
               IP+E  F   E++VK+++ N  G GP
Sbjct: 777 DTYFIPTEEDFQVREFQVKIKSFNVKGDGP 806


>gi|440892313|gb|ELR45556.1| Contactin-3, partial [Bos grunniens mutus]
          Length = 877

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 218/658 (33%), Positives = 321/658 (48%), Gaps = 23/658 (3%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           ++Y W  + +P+FVEED R FVS + G LY + +E  D GNY+C V S V++    G   
Sbjct: 2   LSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPT 61

Query: 385 PLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLP 441
           PL +       +   K    FP+T P A   G  V+LEC A G PVP  NW R  G P  
Sbjct: 62  PLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFALGNPVPQINWRRSDGLPFS 119

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
                  F+ +L IPN + ED G Y C A N R    +   ++  A+P++   + D  + 
Sbjct: 120 SKIKLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVELA 179

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
            +  L W C A G P  +Y W +NGE L  E       +R  I++  LTI  LN   D  
Sbjct: 180 VEDSLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSG 231

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           M+QC A+N+    YSSA+L+V+   P F K P++       G  V + C P A+P+    
Sbjct: 232 MFQCIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSS 291

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           WKK   I+    R     +G L I  V++ D+GIY+C A N  G       L+V   P+ 
Sbjct: 292 WKKGEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTE-PTR 350

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGG 740
               P  + ++   ++ L C    + LL   + W  NG       D +  E    +  G 
Sbjct: 351 ITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGSSSGD 410

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
           L+ I N     +G+Y C+V++ V  +S+   +IV G PG P  V+V E+  T+A + W +
Sbjct: 411 LM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESVKVDEITDTTAQLSWKE 469

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
           G  N  P+  Y + ART ++  W   +   + + +D   G+   +    L PW  YEF+V
Sbjct: 470 GTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRV 524

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N++G GEPS PS +  T    P   PS + GGGG   +L I+W+P+P E QN     
Sbjct: 525 VASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFG 584

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           Y + +R    T +  +T+    +    V R  S   ++ YEVKV   N+ G GP S V
Sbjct: 585 YVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESILPFSLYEVKVGVYNNKGEGPFSPV 641



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 162/658 (24%), Positives = 251/658 (38%), Gaps = 78/658 (11%)

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           + G L     +Q D+G+Y C  ++     G+N     L  +   ++ QL           
Sbjct: 127 FSGVLEIPNFQQEDSGSYECIAEN---SRGKNVARGRLTYYAKPHWVQLIKDVEL----- 178

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
                 D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C
Sbjct: 179 ---AVEDSLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQC 235

Query: 469 RASNDRSALESSVTISIQAE-PNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRN 525
            A N    + SS  + + A  P+F+     K +  Q  +++   C+    P    SW + 
Sbjct: 236 IAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSW-KK 294

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           GE++  E     ++   F+ D  L I  +  + D  +Y C A+NQ      +  L V+T 
Sbjct: 295 GEVIVQE-----NERTSFLNDGGLKIVNVT-KADAGIYTCIAENQFGKANGTTHL-VVTE 347

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE---- 639
                  P   +   GE  +V + C  +  P     F W  +G +         FE    
Sbjct: 348 PTRITLAPSNMDVSVGE--SVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGG 405

Query: 640 --NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
             +G+L+I  +    SG Y C          S   LIV   P   E +  K+        
Sbjct: 406 SSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESV--KVDEITDTTA 463

Query: 698 QLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
           QL     T+    V AY +       +G      +  P + IDG     T        EY
Sbjct: 464 QLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--PEV-IDGKTHTATVVELNPWVEY 520

Query: 756 E--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DG 801
           E   V  + +G         K+ T+  V    P  + GG       ++   I W    + 
Sbjct: 521 EFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEE 576

Query: 802 ATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
             NG     +  ++ +  TNW      +   V   +  RY  R E+     ++P+S YE 
Sbjct: 577 LQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES-----ILPFSLYEV 625

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           KV   N  G G P SP     +  ++P  APS++        ++ +SW  +P +  N   
Sbjct: 626 KVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAIPWKLSNGHL 684

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           + Y++ +      E  S  LK  GNV  A +R + S   YYT     V+A N  G GP
Sbjct: 685 LGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNLAYYT----AVRAFNSAGTGP 738



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 130/330 (39%), Gaps = 40/330 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P++++   DV     + ++ + +   C A G P PSY W K     + LV        ++
Sbjct: 167 PHWVQLIKDV-----ELAVEDSLYWECRASGKPKPSYRWLKNG---EALVL-------EE 211

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           R  +  G L I++   V D G + C A NK G + S +         +F+     ++   
Sbjct: 212 RIQIENGALTISN-LNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQV 270

Query: 310 NWGKAMFCD-PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
             G  +  D  P   P     W +      V+E++R     DG L    + + DAG Y+C
Sbjct: 271 QVGSEVNLDCKPRASPRALSSWKKGEV--IVQENERTSFLNDGGLKIVNVTKADAGIYTC 328

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
             +++      NG    +   P    +    P+N   +       G+ V L C     P+
Sbjct: 329 IAENQFGKA--NGTTHLVVTEPT---RITLAPSNMDVS------VGESVILPCQVQHDPL 377

Query: 429 PS--YNWTRRGSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALES 479
            +  + W   G+         +F ++       L I N++++  G+Y+C       ++ S
Sbjct: 378 LATMFTWYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSS 437

Query: 480 SVTISIQAEPNFTIPL-TDKHMDNQADLTW 508
           +  + ++  P     +  D+  D  A L+W
Sbjct: 438 AADLIVRGSPGPPESVKVDEITDTTAQLSW 467



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 124/327 (37%), Gaps = 36/327 (11%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P   W + D +          P S K +     G L I + +Q ED G
Sbjct: 94  VKLECFALGNPVPQINWRRSDGL----------PFSSKIKLRKFSGVLEIPNFQQ-EDSG 142

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYY 329
           SY C A N  G  ++      +       L +  E+  ++   +++ +   +  P  +Y 
Sbjct: 143 SYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVELAVED---SLYWECRASGKPKPSYR 199

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++     +EE  ++    +GAL  S L   D+G + C  ++K              V+
Sbjct: 200 WLKNGEALVLEERIQI---ENGALTISNLNVTDSGMFQCIAENKHG-----------LVY 245

Query: 390 PHSNFQQLKFPNNFPKTFPEA---PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
             +  + +    +F KT  +     + G +V L+C     P    +W +    +  N   
Sbjct: 246 SSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSWKKGEVIVQENERT 305

Query: 447 ENFNR-ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQAD 505
              N   L I NV   D G Y C A N       +  + +      T+  ++  +     
Sbjct: 306 SFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGES 365

Query: 506 LTWTCEAFGVP--DVTYSWFRNGELLN 530
           +   C+    P     ++W+ NG L +
Sbjct: 366 VILPCQVQHDPLLATMFTWYFNGALAD 392


>gi|47228828|emb|CAG07560.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1049

 Score =  335 bits (860), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 257/841 (30%), Positives = 376/841 (44%), Gaps = 72/841 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYE---------------WFKEDY 233
           GP +  +P D+   +   ++  + TL+C A G P P Y                     Y
Sbjct: 28  GPRWRMEPGDLFIPVD--TMEEEATLTCDAKGVPPPQYSISFIAESSPRPPCRLLLPSGY 85

Query: 234 VQD----RLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQ 289
           +       L   LI+   D+R  LSGGNLII+   + +D G Y C A N  G+I+S    
Sbjct: 86  LLRVGRWSLNGTLINLGLDRRRRLSGGNLIISSLDRYQDVGMYQCMAFNTAGAILSRRAS 145

Query: 290 LAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS 348
           L F ++  F +  R+     +  G  + C  PT+   + Y W  + +P FV++D R FVS
Sbjct: 146 LQFAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSGDLAYAWVFNEYPYFVQQDNRRFVS 205

Query: 349 YD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407
              G LY + +E  D GNY+C V + V+         P  +   ++    ++       F
Sbjct: 206 QQTGNLYIAKVEPSDVGNYTCVVTNSVTKGKVQSS--PTALILRTDGMMGEYEPKIEVNF 263

Query: 408 PEAPKA--GDKVRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQG 464
           P+   A  G  V LEC A G PVP   W R  G P P     +  N +L IP+ + +D G
Sbjct: 264 PDNVSAARGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDTG 323

Query: 465 EYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR 524
            Y C A N      ++  ++  A+P +   + D  +  +  L W C A G P  +Y+W +
Sbjct: 324 GYECVAENRMGKNMATGRLAFYAKPQWIQAVKDTALAIEERLHWECRANGKPKPSYAWLK 383

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG+ L S        DR  ++D VL++  L    D  MYQC A+N+    Y  A+L VL 
Sbjct: 384 NGQQLLS-------GDRITVEDGVLSVPALALS-DAGMYQCVAENKHGVIYFVAELMVLA 435

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 644
             P F    L +   A  G  VT+ C P+A P    +WKK    I    R  +  +G L 
Sbjct: 436 SPPDFTGNLLRALLKAKAGTTVTLECKPQAYPVASILWKKGNLPIHINDRITLSSDGTLR 495

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           ++ VS+ D+G Y+C A N  GM  + GRL+V   P+   Q P  + I    ++ L C   
Sbjct: 496 LANVSKSDAGGYTCFARNRFGMSSTTGRLLVTD-PTRITQGPADMEIIVGESIVLPCQVA 554

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 764
           ++ +LDV++ W  NG  I   D    E       G L+ I N     AG+Y CVV + V 
Sbjct: 555 SDPVLDVSFSWAFNGQLIAKGD-GHFELVGGRTAGDLM-IRNIQLYHAGKYICVVDTDVE 612

Query: 765 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            +S    +IV+GPP  P  V V EV  ++A + W+ G  NG PI +Y +  RT +   W 
Sbjct: 613 SLSAVAILIVKGPPSPPDSVTVEEVTDSTAQLAWSRGRDNGSPIVNYFVQTRTPFTVGWQ 672

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP--- 881
            V  + + + +D   G    +    L  W  YEF+V+A N +G GEPS  S +  T    
Sbjct: 673 RV--NTVPEIID---GNTLTATVVDLNAWVEYEFRVLARNSVGVGEPSPVSVRTRTEDAG 727

Query: 882 ------------------------ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
                                      P  AP  +GGGGG   +L I+WEP+P E QN  
Sbjct: 728 TCEQTVCCYRRWLSRMLRRERALCCAVPDAAPGDVGGGGGSRSELVITWEPVPEELQNGE 787

Query: 918 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           +  Y I +R   +  +        G     V R  S   ++ + VKV   N  G GP S 
Sbjct: 788 SFGYIIAFRAFGEVSWTHVATSAPG-ASRYVYRNDSIAPFSPFHVKVGTYNSKGQGPFSP 846

Query: 978 V 978
           V
Sbjct: 847 V 847


>gi|410918977|ref|XP_003972961.1| PREDICTED: contactin-1a-like [Takifugu rubripes]
          Length = 1040

 Score =  335 bits (860), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 235/813 (28%), Positives = 376/813 (46%), Gaps = 50/813 (6%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLV 239
           I   D    GP F ++P DVV+  ++ S    I+++C A   P  SY W + ++ + +L+
Sbjct: 28  IYGDDATGYGPIFEEEPVDVVY--TEDSPDGRISMNCRARANPPASYRWRRGNW-EIKLM 84

Query: 240 ANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF- 298
                   D+ ++L GGNL+IN+P++ +  G Y C A N +G++IS+  Q  FG++ EF 
Sbjct: 85  EQ-----PDEHYSLVGGNLVINNPKK-KHAGVYICVARNIYGTVISKEAQFKFGYLEEFP 138

Query: 299 NLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSYD-GALYFS 356
             +R P    +  G  + C PP  +P  V Y W  + FP F+  D+R FVS   G LY S
Sbjct: 139 QEERDPVHVKEGQGAVLLCAPPNAWPEEVTYRWIFNEFPVFLNTDRRRFVSQKTGNLYIS 198

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPL-KVFPHSNFQQLKFPNNFPKTFPEAPKA-G 414
            +E  DAGNYSC V S +        F  L  + P     + K+P +    F +      
Sbjct: 199 KVEAQDAGNYSCFVSSPMIGRSVFSKFISLIPLVPEEG--ERKYPADIRVKFQDTTAMLA 256

Query: 415 DKVRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
             + LEC A G P+P   W +   + LP N        +L + NV+ +D G Y C A N 
Sbjct: 257 SNITLECFALGNPIPHIVWRKVDATDLPPNHEISESGAMLHLYNVQYDDVGGYECEAINT 316

Query: 474 RSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSET 533
           +        + +++ P +   + +  +D  +  +  C A G P     W+++G +     
Sbjct: 317 KGKDWHKAWVYVESAPEWAETINNTQIDIGSAHSMRCVAMGKPFPFIRWYKDGYMYGKGE 376

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L              LT        D  MYQC A+N    +Y++A+LRV+   P+F+  P
Sbjct: 377 LKFSS----------LTFT------DSGMYQCIAENSWGIKYANAELRVIACAPTFEFNP 420

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDS 653
           ++ +      G V I C P AAP+P+F W K   ++ +  R  I  +G+L I   +++D 
Sbjct: 421 VKKQLLGARDGRVVIECKPRAAPRPQFRWMKGKELLFNNSRISILFDGSLEIRDATKNDE 480

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           G+Y+C A N  G   S G L +    S     P    +     + LRC+A  + +LD+ +
Sbjct: 481 GVYTCFAENSRGKANSSGYLTITEATS-ITVAPEDSQVKVGEEVVLRCAASFDPMLDITF 539

Query: 714 IWTHNGVRIGNMDLNELETPNINIDGGL--LEITNASFADAGEYECVVKSTVGKISTKTT 771
           IW  +  R+ + D        +  D G   L I NA     G Y C  ++ V        
Sbjct: 540 IWAID-FRVIDFDSEWQHYERLWRDDGSGDLRIKNAQIWHEGRYTCTAQTVVDSDVAYAD 598

Query: 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSE 828
           + V G PG PG ++V E+  T   ++WT GA +  PI +Y I  R  W      W N S 
Sbjct: 599 LKVVGMPGPPGVIRVEEIGNTGVKLRWTKGADHNSPILYYTIQTRHYWALNEDDWRNAST 658

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
                +     G  E +    + PW  Y+F++IA NE G GE S PS +  T    P  +
Sbjct: 659 SPAFLD-----GNVERAEVTDIYPWLEYQFRIIATNEHGSGEASIPSLKIKTWDAAPVVS 713

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEYGN 943
           P+ + G GG+ G++ I+W P+        +  Y + ++  N  ++  ET+     + Y +
Sbjct: 714 PTNVAGYGGRNGEIVITWTPVEPWHFYGKSFGYIVAFKPHNAYDWWFETISDPETRRYVH 773

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
                +    +F   E++VK+++ N  G GP S
Sbjct: 774 RDSYFIPTEEDFQVREFQVKIKSFNVKGDGPYS 806


>gi|322790658|gb|EFZ15442.1| hypothetical protein SINV_13283 [Solenopsis invicta]
          Length = 252

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 157/253 (62%), Positives = 193/253 (76%), Gaps = 5/253 (1%)

Query: 17  VFSQTI--DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEH 74
            F+Q I   E    CPQHW+++++SCYRF+KSPL+ R DA+ NC++  SDL  +N  +EH
Sbjct: 1   AFAQNILYGEQAYECPQHWIRFQESCYRFIKSPLRPREDARRNCQAFQSDLLTINSMEEH 60

Query: 75  GFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE-DGTNLNELDAAFLPEPADNVQ-RDYLA 132
           GF++YQL WQDPQ R WY G   QS  LW+NE D T L  +D AFLPEP DNV  RDYLA
Sbjct: 61  GFVLYQLLWQDPQHRTWYTGVKLQS-GLWINEADSTTLINMDNAFLPEPNDNVLGRDYLA 119

Query: 133 YSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYF 192
           YS+S +L+RWG E+VTG E LL+ICEA I  LH L+ DDRTYQYG+DI+NP +IPRGPYF
Sbjct: 120 YSYSNNLQRWGLEKVTGREELLYICEAPIATLHNLVEDDRTYQYGIDIDNPLQIPRGPYF 179

Query: 193 IKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT 252
           IKQP   VFD+SKR I ND++LSC AGGYP P+YEWFKEDY  DRL+A  IDPLS++R+T
Sbjct: 180 IKQPISKVFDVSKRRISNDVSLSCLAGGYPTPTYEWFKEDYENDRLIATKIDPLSNRRYT 239

Query: 253 LSGGNLIINDPRQ 265
           +SGG LII +P Q
Sbjct: 240 VSGGTLIIYEPEQ 252


>gi|355763246|gb|EHH62135.1| hypothetical protein EGM_20344, partial [Macaca fascicularis]
          Length = 876

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 215/656 (32%), Positives = 316/656 (48%), Gaps = 23/656 (3%)

Query: 328 YYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
           Y W  + FP+FV ED R F+S + G LY S ++  D G+Y C V++ V++     P  PL
Sbjct: 4   YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 63

Query: 387 KVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
            +       +   K   +FP T   A   G  V++EC A G PVP+  W +    +P  +
Sbjct: 64  TLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFALGNPVPTITWMKVNGYIPSKS 121

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L IPNV+++D G Y CRA N R        + +   P++   L D  +D+ +
Sbjct: 122 RLRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGS 181

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
            L W C+A G P  TY W +NG       +PL  Q R  + + VL I  +N + D  MYQ
Sbjct: 182 PLRWECKATGKPRPTYRWLKNG-------VPLSSQSRVEMVNGVLMIHNVN-QSDAGMYQ 233

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N+    Y+SA+L++L   P+F    LE      +   V I C P+ +PKP   WKK
Sbjct: 234 CLAENKYGAIYASAELKILASAPTFALNQLEKTIIVTKDQEVVIECKPQGSPKPTISWKK 293

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               +    R  I  +G+L I   S+ D G Y C   NV G  E    L V   P+  E 
Sbjct: 294 GDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-PTRIEL 352

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 743
            P +  +    ++ L C A  +  LDV + WT  G  I    +    E+         L 
Sbjct: 353 TPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEEEGGHFESIRAQASSADLM 412

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           I N     AG Y C V++T   +S +  ++V GPPG PG V V E+ +++AT+ W+  A 
Sbjct: 413 IRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPAAD 472

Query: 804 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIA 862
           N  PI+ Y + AR+ ++  W  V      K V +  TG  E+++   L PW  YEF+V+A
Sbjct: 473 NHSPISSYNLQARSPFSLGWQTV------KTVPEIITGDMESAMAVDLNPWVEYEFRVVA 526

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N +G G+PS+PS    T    P  AP+ + G  G+  +L I+WEP+  E QN     Y 
Sbjct: 527 TNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYI 586

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + +R  N T    E +         + R  S    T +EVKV   N+ G GP S++
Sbjct: 587 VAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 641



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 130/341 (38%), Gaps = 53/341 (15%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P+++++  D   D       + +   C A G P P+Y W K          N +   S  
Sbjct: 166 PHWVEKLNDTQLDSG-----SPLRWECKATGKPRPTYRWLK----------NGVPLSSQS 210

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE--IG 307
           R  +  G L+I++  Q  D G Y C A NK+G+I + +          F L +  +  I 
Sbjct: 211 RVEMVNGVLMIHNVNQ-SDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLEKTIIV 269

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
            ++    + C  P   P     W +      V E+KR+ +  DG+L      + D G Y 
Sbjct: 270 TKDQEVVIECK-PQGSPKPTISWKKG--DRAVRENKRIAILPDGSLRILNASKSDEGKYV 326

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-----AGDKVRLECV 422
           C         G N  F   ++    + ++       P      PK      G+ + L C 
Sbjct: 327 CR--------GEN-VFGSAEIIASLSVKE-------PTRIELTPKRTELTVGESIVLNCK 370

Query: 423 AF--GYPVPSYNWTRRGSPL---PRNAYFENF-----NRILTIPNVKVEDQGEYICRASN 472
           A        ++ WT +G P+       +FE+      +  L I N+ +   G Y CR   
Sbjct: 371 AIHDASLDVTFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQT 430

Query: 473 DRSALESSVTISIQAEPN-FTIPLTDKHMDNQADLTWTCEA 512
              ++     + ++  P    I + ++  ++ A L+W+  A
Sbjct: 431 TADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPAA 471



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 125/333 (37%), Gaps = 45/333 (13%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           + + C+A G P P+  W K          N   P S  R   S   L I +  Q++D G 
Sbjct: 94  VKMECFALGNPVPTITWMK---------VNGYIP-SKSRLRKSQAVLEIPN-VQLDDAGI 142

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP-------TNYP 324
           Y C+A N  G            F G+  +   P    +     +    P       T  P
Sbjct: 143 YECRAENSRGK---------NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKP 193

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
              Y W ++  P  +    RV +  +G L    + Q DAG Y C  ++K      +    
Sbjct: 194 RPTYRWLKNGVP--LSSQSRVEM-VNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELK 250

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
            L   P     QL+      KT         +V +EC   G P P+ +W +    +  N 
Sbjct: 251 ILASAPTFALNQLE------KTI--IVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENK 302

Query: 445 YFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
                 +  L I N    D+G+Y+CR  N   + E   ++S++ EP   I LT K  +  
Sbjct: 303 RIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVK-EPT-RIELTPKRTELT 360

Query: 504 A--DLTWTCEAF--GVPDVTYSWFRNGELLNSE 532
               +   C+A      DVT+ W   G+ ++ E
Sbjct: 361 VGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 393


>gi|395541203|ref|XP_003772536.1| PREDICTED: contactin-1-like, partial [Sarcophilus harrisii]
          Length = 643

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 213/641 (33%), Positives = 317/641 (49%), Gaps = 37/641 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    ++L+C A   P P Y+W   ++  D         L++
Sbjct: 29  GPIFEEQPIDTIY--PEESPDGKVSLNCRARASPFPVYKWRMNNWDID---------LTN 77

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
           +R+++ GGNL+IN+P ++ D G Y C ASN +G + S    L+FG++  F  +   E+  
Sbjct: 78  ERYSMVGGNLVINNPDKLRDAGKYFCLASNIYGMVRSTEATLSFGYLDPFPPEERVEVKV 137

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR +VS  +G LY + +E+ D GN
Sbjct: 138 KEGIGLVLLCDPPYHFPDDLSYRWLLNEFPIFITMDKRRYVSQTNGNLYIANVEESDRGN 197

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P S+     +P +    F +     G  V LEC A 
Sbjct: 198 YSCFVSSPSITKSVFSKFIPL--IPLSDRTTKLYPADIKVQFKDTYALMGHNVTLECFAL 255

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R        I 
Sbjct: 256 GNPVPEIRWRKVLEPMPSTAEISMSGAVLKIFNIQLEDEGTYECEAENIRGKDRHQARIY 315

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA P +   + D   D  +DL W C A G P  T  W RNG   +   L L        
Sbjct: 316 VQAFPEWVEHINDTEADIGSDLYWPCVATGKPIPTIRWLRNGYAYHKGELRLYG----LT 371

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            DN              MYQC A+N     Y++A+L++L + P+F+  P++ +T A +GG
Sbjct: 372 FDNA------------GMYQCIAENAHGAIYANAELKILAMAPTFEMNPMKKKTLAAKGG 419

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+AAPKPKF W K    + +  R  I+++G+L I  ++R D G Y+C A N  
Sbjct: 420 RVLIECKPKAAPKPKFSWSKGTEWLVNSTRILIWDDGSLEIRNITRADEGTYTCFAENNR 479

Query: 665 GMDESKGRLIVLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
           G   + G L++         LPP    +    N  ++C+A  +  LD+ +IW+ NG  I 
Sbjct: 480 GKANNTGTLLITDATRI--TLPPANADVTVGENATMQCAASHDPALDLTFIWSLNGYVID 537

Query: 724 NMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
               N     N  ID  G L I NA    AG Y C  ++ V   S    ++V GPPG PG
Sbjct: 538 FNKENSHYMRNFMIDSNGDLLIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPG 597

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 823
           GV++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W
Sbjct: 598 GVRIEDIRDTSVALTWSRGSDNHSPISKYSIQTKTILSDDW 638


>gi|432941979|ref|XP_004082933.1| PREDICTED: contactin-1a-like [Oryzias latipes]
          Length = 1040

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 243/840 (28%), Positives = 391/840 (46%), Gaps = 56/840 (6%)

Query: 153 LLFICEASI-QKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILND 211
           LL +  +S+   +  L N+ R +         +    GP F ++P DVV+  ++ S    
Sbjct: 7   LLLLASSSVPAAVGVLFNEPRIF-------GEEATGYGPIFEEEPVDVVY--TEDSPDKR 57

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           I+++C A   P  SY W ++++ + +L+        D+ ++L GGNL+I +P Q +  G+
Sbjct: 58  ISMNCRARANPPASYRWRRDNW-EIKLMEQ-----PDEHYSLVGGNLVITNPIQKKHAGT 111

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYY 329
           Y C A N +G++IS+  ++ FGF+ EF + +R P    +  G  + C PP  +P  V Y 
Sbjct: 112 YVCVAKNIYGTVISKEARVKFGFVEEFPDEEREPVSVKEGQGVVLLCVPPKAWPEEVTYR 171

Query: 330 WARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
           W  + FP F+  D+R FVS   G LY S +E  DAGNYSC V S +        F  L  
Sbjct: 172 WIYNEFPVFLHTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPIIGKSVYSKFTTLIP 231

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKA-GDKVRLECVAFGYPVPSYNWTRRGSP-LPRNAYF 446
            P  + Q  K+P +    F +        + LEC A G P+P   W +  S  LP N   
Sbjct: 232 LPPDDGQ--KYPADINVKFGDTTAMLASNITLECFALGNPIPHIVWRKVDSTDLPANHEI 289

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
                +L + NV+ ED G Y C A N +        + +++ P +   + +  +D  ++ 
Sbjct: 290 SESGAVLHLYNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQVDIGSEH 349

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
           T  C A G P     W+++G +     L              LT        D  MYQC 
Sbjct: 350 TMRCVASGKPFPFIRWYKDGYMYGKGELKFSS----------LTFD------DSGMYQCI 393

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
           A+N    +Y++A+LRV+   P+F+  P++ +    + G V I C P AAP+P+F+WKK  
Sbjct: 394 AENFWGIKYANAELRVIACAPTFEFNPVKKQLLGAKDGRVLIECKPRAAPRPRFIWKKGE 453

Query: 627 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
            ++ +  R  +  +G L I   +++D G+Y+C A N  G   + G L +    S     P
Sbjct: 454 ELLFNSTRISVMTDGTLEIRNATKNDEGLYTCFAENDRGKANNSGYLTITEATS-ITVAP 512

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI-NIDG-GLLEI 744
               +     + LRCSA  + +LD+ ++W  +  R+ + D        + N DG G L I
Sbjct: 513 EDSEVKVGDEVILRCSASHDPMLDITFVWAVD-FRVIDFDSEWQHYERVMNQDGTGDLRI 571

Query: 745 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 804
            NA     G Y C  ++ V        + V G PG PG ++V E+  T   + WT GA +
Sbjct: 572 KNAQIWHEGRYTCTAQTVVDSDKAYADLKVVGVPGPPGVIRVEEIGDTWVKLVWTKGAEH 631

Query: 805 GRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             PI +Y I  R  W      W N S      +     G  E +    L PW  Y+F+++
Sbjct: 632 NSPILYYTIQTRHFWALNEDDWKNASTSPTFLD-----GTVERAEVTDLYPWLEYQFRIV 686

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A NE G GE S PS +  T    P  +P+ + G GG+ G++ I+W P+           Y
Sbjct: 687 ATNEYGSGEASIPSLKIKTWDAPPVVSPTDVAGYGGRNGEIIITWTPVQPWFFYGKKFGY 746

Query: 922 KIFWRKKNDTEFQSETL-----KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            + ++  +  ++  ET+     + Y +          +F   E++VK+++ N  G GP S
Sbjct: 747 IVAFKPHDAYDWWYETISDPETRRYVHKDTYFFPTEEDFQVREFQVKIKSFNVKGDGPYS 806


>gi|344276742|ref|XP_003410166.1| PREDICTED: contactin-2 [Loxodonta africana]
          Length = 1048

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 265/803 (33%), Positives = 370/803 (46%), Gaps = 45/803 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  ++F   + S    +TL+C A   P  +Y W        ++    I     
Sbjct: 36  GPVFEDQPLGLLF--PEESTEEKVTLACGARASPPATYRW--------KMNGTEIKLEPG 85

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 86  SRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKT 145

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 146 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 205

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL      P+ F    KA          G +
Sbjct: 206 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDPRLFVPNIKARFPAETYALVGQQ 256

Query: 417 VRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           V LEC AFG PVP   W +  GS  P+ A  E     L IP+V  ED+G Y C A N + 
Sbjct: 257 VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEP---TLQIPSVSFEDEGTYECEAENSKG 313

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE-TL 534
                  I +Q         +         LT   +     D    + + G+        
Sbjct: 314 RDTVQGRIIVQEVTLAHRTGSKASPPGMEVLTAGFKRVQAKDFALWFLKWGDPPPPGFKS 373

Query: 535 PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
           P   + R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F+  P+
Sbjct: 374 PECKESRLEVSAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPV 432

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 654
                A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +SR D G
Sbjct: 433 RRLIPAARGGEIIIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEG 492

Query: 655 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
            Y+C A N  G   S G L V    +     P    I    NL L+C A  +  +D+ + 
Sbjct: 493 KYTCFAENSMGKANSTGTLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFT 551

Query: 715 WTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           WT +   I  +      +  ++    G L I NA     G+Y CV ++ V   S + TV+
Sbjct: 552 WTLDDFPIDFDKPRGHYQRASVKETVGDLTILNAQLRHGGKYTCVAQTVVDSASKEATVL 611

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           V GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W +V  +    
Sbjct: 612 VRGPPGPPGGVVVRDISDTTVQLSWSRGFDNHSPIAKYTLQARTPLAGKWKHVRTNPANI 671

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           E     G  E +    L PW  YEF+V+A N LG GEPS PS +  T    P  APS + 
Sbjct: 672 E-----GNAETAQVLGLTPWMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLS 726

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
           GGGG  G+L I+W P+ RE QN     Y + +R++    +Q+  +    +    V    S
Sbjct: 727 GGGGAPGELIINWTPMSREYQNGDGFGYLLSFRRQGSASWQTARVPG-ADARHFVYSNES 785

Query: 954 EFYYTEYEVKVQAINDVGPGPES 976
              YT ++VK+++ N  G GPES
Sbjct: 786 VRPYTPFQVKIRSYNRRGEGPES 808



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ ++ K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ R
Sbjct: 788 PYTPFQVKIRSYNRRGEG-PESLTALVYSAEEEPRLAPAKVWANGISSSEMNVTWEPVQR 846

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 847 D-MNGVLLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVTGLHPNTKYHVTVRAYNRAG 903

Query: 972 PGPES 976
            GP S
Sbjct: 904 TGPAS 908


>gi|345786234|ref|XP_003432800.1| PREDICTED: contactin-4 isoform 2 [Canis lupus familiaris]
          Length = 807

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 204/579 (35%), Positives = 293/579 (50%), Gaps = 19/579 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIP 456
           K   +FP+T P A   G  V+LEC A G PVP+  W R  G P+ R A     N IL IP
Sbjct: 7   KIEVHFPETVPTA--KGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIP 64

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           N + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W C+A G P
Sbjct: 65  NFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEENVFWECKANGRP 124

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             TY W +NGE       PL  +DR  I+  +L I  +N   D  MYQC A+N+    +S
Sbjct: 125 KPTYRWLKNGE-------PLLTRDRIQIEQGMLNITIVNLS-DAGMYQCVAENKHGVIFS 176

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           SA+L V+ + P F +  L+  T    GG V I C P+A+PKP + WKK  +I+    R  
Sbjct: 177 SAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERIT 236

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           I E+G+L I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    +
Sbjct: 237 ISEDGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGES 295

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 755
           + L C    +  LD+ + W+ NG  I  + D +  E        G L I N     AG+Y
Sbjct: 296 IVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKY 355

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C+V+++V K+S    +IV GPPG P GV + E+  T+A + W  G  N  PIT Y I A
Sbjct: 356 VCMVQTSVDKLSAAADLIVRGPPGPPEGVTIDEITDTTAQLSWRPGPDNHSPITMYVIQA 415

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           RT ++  W  V  + + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 416 RTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPS 470

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  
Sbjct: 471 EKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWML 530

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 531 TVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGP 568



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 147/648 (22%), Positives = 235/648 (36%), Gaps = 56/648 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 58  NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAIEE 112

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +    +L I  V + D G Y C 
Sbjct: 113 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGMLNITIVNLSDAGMYQCV 166

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 167 AENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 226

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L        + +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 227 DIL-------RENERITISED-GSLRIVNVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 277

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 278 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQD 337

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 338 SAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEGVTIDEITDTTAQLS 397

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 398 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 454

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 455 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 514

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 515 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGE 566

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + 
Sbjct: 567 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRH 624

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 625 DDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTGPSS 670



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 54/323 (16%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL---IINDP 263
           +I  ++   C A G P P+Y W K          N    L+  R  +  G L   I+N  
Sbjct: 109 AIEENVFWECKANGRPKPTYRWLK----------NGEPLLTRDRIQIEQGMLNITIVN-- 156

Query: 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIG-EFN---LKRAPEIGNQNWGKAMFCDP 319
             + D G Y C A NK G I S S +L+   +G +F+   LKR   +  +  G+ +    
Sbjct: 157 --LSDAGMYQCVAENKHGVIFS-SAELSVIAVGPDFSRTLLKRVTLV--KVGGEVVIECK 211

Query: 320 PTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSD 376
           P   P   Y W +    + + E++R+ +S DG+L    + + DAG+Y+C   N     S 
Sbjct: 212 PKASPKPVYTWKKGR--DILRENERITISEDGSLRIVNVTKSDAGSYTCIATNHFGTASS 269

Query: 377 TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWT 434
           TG      P +V        +  P++   T       G+ + L C V   + +   + W+
Sbjct: 270 TGNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVFTWS 315

Query: 435 RRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
             G  +  +   ++F R+        L I N++++  G+Y+C        L ++  + ++
Sbjct: 316 FNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVR 375

Query: 487 AEPNFTIPLT-DKHMDNQADLTW 508
             P     +T D+  D  A L+W
Sbjct: 376 GPPGPPEGVTIDEITDTTAQLSW 398



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 145/387 (37%), Gaps = 52/387 (13%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 24  VKLECFALGNPVPTIIWRRADG----------KPIARKARRHKSNGILEIPNFQQ-EDAG 72

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            Y C A N  G  ++   QL F     +I + N        N  W     C      P  
Sbjct: 73  LYECVAENSRGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWE----CK-ANGRPKP 126

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            Y W ++  P    +  ++     G L  + +   DAG Y C  ++K             
Sbjct: 127 TYRWLKNGEPLLTRDRIQI---EQGMLNITIVNLSDAGMYQCVAENKHG----------- 172

Query: 387 KVFPHSNFQQLKFPNNFPKTFPE---APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
            +F  +    +    +F +T  +     K G +V +EC     P P Y W +    L  N
Sbjct: 173 VIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILREN 232

Query: 444 AYFE-NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
                + +  L I NV   D G Y C A+N      S+  + ++      +P +   +  
Sbjct: 233 ERITISEDGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTV 292

Query: 503 QADLTWTCEAF--GVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNV--LTIRYLN 555
              +   C+       D+ ++W  NG L++ +    +D D   R   QD+   L IR + 
Sbjct: 293 GESIVLPCQVTHDHSLDIVFTWSFNGHLIDFD----KDGDHFERVGGQDSAGDLMIRNIQ 348

Query: 556 PERDPAMYQCRAKNQLKTRYSSAQLRV 582
             +    Y C  +  +    ++A L V
Sbjct: 349 -LKHAGKYVCMVQTSVDKLSAAADLIV 374


>gi|426339224|ref|XP_004033558.1| PREDICTED: contactin-4-like [Gorilla gorilla gorilla]
          Length = 807

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 204/579 (35%), Positives = 289/579 (49%), Gaps = 19/579 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIP 456
           K    FP+T P A   G  V+LEC A G PVP+  W R  G P+ R A     N IL IP
Sbjct: 7   KIEVQFPETVPTA--KGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIP 64

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           N + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W C+A G P
Sbjct: 65  NFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEENVFWECKANGRP 124

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             TY W +NGE       PL  QDR  I+   L I  +N   D  MYQC A+N+    +S
Sbjct: 125 KPTYRWLKNGE-------PLLTQDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFS 176

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           +A+L V+ + P F +  L+  T    GG V I C P+A+PKP + WKK   I+    R  
Sbjct: 177 NAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRGILKENERIT 236

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    +
Sbjct: 237 ISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGES 295

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 755
           + L C    +  LD+ + W+ NG  I  + D +  E        G L I N     AG+Y
Sbjct: 296 IVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKY 355

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I A
Sbjct: 356 VCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQA 415

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           RT ++  W  VS   + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 416 RTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPS 470

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  
Sbjct: 471 EKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWML 530

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 531 TVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGP 568



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 147/649 (22%), Positives = 234/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 58  NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAIEE 112

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 113 ------NVFWECKANGRPKPTYRWLKNGEPLLTQDRIQIEQGTLNITIVNLSDAGMYQCL 166

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 167 AENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 226

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
            +L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 227 GIL-------KENERITISED-GNLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 277

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 278 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQD 337

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 338 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 397

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   ++ +  P + IDG     T        EYE  
Sbjct: 398 WRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFR 454

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 455 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 514

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 515 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGE 566

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 567 G-PFSPTTVVYSAEEEPTKPPASIFARSISATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 624

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 625 E-DKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 670



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 129/322 (40%), Gaps = 52/322 (16%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL---IINDP 263
           +I  ++   C A G P P+Y W K          N    L+  R  +  G L   I+N  
Sbjct: 109 AIEENVFWECKANGRPKPTYRWLK----------NGEPLLTQDRIQIEQGTLNITIVN-- 156

Query: 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPP 320
             + D G Y C A NK G I S +         +F+   LKR   +  +  G+ +    P
Sbjct: 157 --LSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLV--KVGGEVVIECKP 212

Query: 321 TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRN 380
              P   Y W +      ++E++R+ +S DG L    + + DAG+Y+C   +        
Sbjct: 213 KASPKPVYTWKKGR--GILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASST 270

Query: 381 GPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWTR 435
           G      P +V        +  P++   T       G+ + L C V   + +   + W+ 
Sbjct: 271 GNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVFTWSF 316

Query: 436 RGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
            G  +  +   ++F R+        L I N++++  G+Y+C        L ++  + ++ 
Sbjct: 317 NGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRG 376

Query: 488 EPNFTIPLT-DKHMDNQADLTW 508
            P     +T D+  D  A L+W
Sbjct: 377 PPGPPEAVTIDEITDTTAQLSW 398



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 123/329 (37%), Gaps = 40/329 (12%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 24  VKLECFALGNPVPTIIWRRADG----------KPIARKARRHKSNGILEIPNFQQ-EDAG 72

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            Y C A N  G  ++   QL F     +I + N        N  W     C      P  
Sbjct: 73  LYECVAENSRGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWE----CK-ANGRPKP 126

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            Y W ++  P   ++  ++     G L  + +   DAG Y C  ++K      N     +
Sbjct: 127 TYRWLKNGEPLLTQDRIQI---EQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVI 183

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            V P  +   LK             K G +V +EC     P P Y W +    L  N   
Sbjct: 184 AVGPDFSRTLLKRVTLV--------KVGGEVVIECKPKASPKPVYTWKKGRGILKENERI 235

Query: 447 ---ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
              E+ N  L I NV   D G Y C A+N      S+  + ++      +P +   +   
Sbjct: 236 TISEDGN--LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVG 293

Query: 504 ADLTWTCEAF--GVPDVTYSWFRNGELLN 530
             +   C+       D+ ++W  NG L++
Sbjct: 294 ESIVLPCQVTHDHSLDIVFTWSFNGHLID 322


>gi|119584281|gb|EAW63877.1| contactin 4, isoform CRA_e [Homo sapiens]
          Length = 807

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 203/579 (35%), Positives = 290/579 (50%), Gaps = 19/579 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIP 456
           K    FP+T P A   G  V+LEC A G PVP+  W R  G P+ R A     N IL IP
Sbjct: 7   KIEVQFPETVPTA--KGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIP 64

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           N + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W C+A G P
Sbjct: 65  NFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRP 124

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             TY W +NGE       PL  +DR  I+   L I  +N   D  MYQC A+N+    +S
Sbjct: 125 KPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFS 176

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           +A+L V+ + P F +  L+  T    GG V I C P+A+PKP + WKK  +I+    R  
Sbjct: 177 NAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERIT 236

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    +
Sbjct: 237 ISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGES 295

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 755
           + L C    +  LD+ + W+ NG  I  + D +  E        G L I N     AG+Y
Sbjct: 296 IVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKY 355

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I A
Sbjct: 356 VCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQA 415

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           RT ++  W  VS   + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 416 RTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPS 470

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  
Sbjct: 471 EKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWML 530

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 531 TVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGP 568



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 147/649 (22%), Positives = 235/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 58  NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 112

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 113 ------NVFWECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCL 166

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 167 AENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 226

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 227 DIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 277

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 278 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQD 337

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 338 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 397

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   ++ +  P + IDG     T        EYE  
Sbjct: 398 WRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFR 454

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 455 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 514

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 515 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGE 566

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 567 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 624

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 625 E-DKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 670



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 133/328 (40%), Gaps = 60/328 (18%)

Query: 209 LNDITLS--------CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL-- 258
           +NDI ++        C A G P P+Y+W K          N    L+  R  +  G L  
Sbjct: 103 INDIHVAMEENVFWECKANGRPKPTYKWLK----------NGEPLLTRDRIQIEQGTLNI 152

Query: 259 -IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKA 314
            I+N    + D G Y C A NK G I S +         +F+   LKR   +  +  G+ 
Sbjct: 153 TIVN----LSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLV--KVGGEV 206

Query: 315 MFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 374
           +    P   P   Y W +    + ++E++R+ +S DG L    + + DAG+Y+C   +  
Sbjct: 207 VIECKPKASPKPVYTWKKGR--DILKENERITISEDGNLRIINVTKSDAGSYTCIATNHF 264

Query: 375 SDTGRNGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP- 429
                 G      P +V        +  P++   T       G+ + L C V   + +  
Sbjct: 265 GTASSTGNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDI 310

Query: 430 SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSV 481
            + W+  G  +  +   ++F R+        L I N++++  G+Y+C        L ++ 
Sbjct: 311 VFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAA 370

Query: 482 TISIQAEPNFTIPLT-DKHMDNQADLTW 508
            + ++  P     +T D+  D  A L+W
Sbjct: 371 DLIVRGPPGPPEAVTIDEITDTTAQLSW 398



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 122/329 (37%), Gaps = 40/329 (12%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 24  VKLECFALGNPVPTIIWRRADG----------KPIARKARRHKSNGILEIPNFQQ-EDAG 72

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            Y C A N  G  ++   QL F     +I + N        N  W     C      P  
Sbjct: 73  LYECVAENSRGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWE----CK-ANGRPKP 126

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            Y W ++  P    +  ++     G L  + +   DAG Y C  ++K      N     +
Sbjct: 127 TYKWLKNGEPLLTRDRIQI---EQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVI 183

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            V P  +   LK             K G +V +EC     P P Y W +    L  N   
Sbjct: 184 AVGPDFSRTLLKRVTLV--------KVGGEVVIECKPKASPKPVYTWKKGRDILKENERI 235

Query: 447 ---ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
              E+ N  L I NV   D G Y C A+N      S+  + ++      +P +   +   
Sbjct: 236 TISEDGN--LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVG 293

Query: 504 ADLTWTCEAF--GVPDVTYSWFRNGELLN 530
             +   C+       D+ ++W  NG L++
Sbjct: 294 ESIVLPCQVTHDHSLDIVFTWSFNGHLID 322


>gi|136256388|ref|NP_851300.2| contactin-1a precursor [Danio rerio]
 gi|134054472|emb|CAM73230.1| cntn1a [Danio rerio]
          Length = 1032

 Score =  325 bits (834), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 235/796 (29%), Positives = 379/796 (47%), Gaps = 42/796 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    ITL+C     P  SY W   +   + ++A   DP   
Sbjct: 45  GPVFEEQPLDTIY--PEESPEEKITLTCRTRANPPASYRWRLNN--AELVLAEGGDP--- 97

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIG 307
             +++S GNL+I+ P + +  G+Y C ASN++GS+ S   ++ FG++  F+  +R     
Sbjct: 98  -HYSVSEGNLLISSPDKSKHAGNYTCVASNQYGSVTSRRARVQFGYLDMFSTDEREAVYV 156

Query: 308 NQNWGKAMFCDPPTNYP-GVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
            +  G  + C PP ++P  +++ W  + FP F+  D+R FVS   G LY S +   D+GN
Sbjct: 157 KEGQGAVLLCAPPPHFPEDLSFRWMLNEFPEFIPLDQRRFVSQSTGNLYISTVRSTDSGN 216

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P +     K+P +     P++    G  + LEC A 
Sbjct: 217 YSCFVSSPAIAKSVFSKFIPL--VPIAERSLRKYPADIKVKSPDSWALLGQNITLECFAL 274

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFN-RILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G P+P   W +    LP   +  + +  +L + +++ ED+G Y C A N +        +
Sbjct: 275 GNPIPQIRWRKLDGVLPPLRHDVSMSGALLHLYSLQYEDEGLYECEADNSKGKDWHKTHL 334

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            ++  P++   ++   +D   D   +C+A G P     + +NG +              +
Sbjct: 335 YVEGAPDWLEQISSSEVDIGGDYIMSCQASGKPKPHVHFLKNGHM--------------Y 380

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           ++ + +    L  E D  MYQC A+N+    +++A+LRV    PSF+  P++ +      
Sbjct: 381 MKGHEVRFSRLGFE-DSGMYQCVAENRHGVIHANAELRVFASAPSFQYNPVKPKLLGARN 439

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V   C P AAP+P   W K   ++ +  R  I+ +G+L +  +S+ D G Y+C A N 
Sbjct: 440 GRVVFECRPRAAPRPNITWSKGTELLHNSSRISIWLDGSLELLNISKSDEGKYTCFAEND 499

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L +    +     P    ++   + ++ C A  +  LD+ +IW+ +G  I 
Sbjct: 500 RGRANSTGSLSITDA-TKITLAPSNADVSVGEDARMECVASHDPGLDLTFIWSLDGHTID 558

Query: 724 -NMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              D    +    +  G     L IT+     AG Y C  ++ V   +    ++V GPPG
Sbjct: 559 LQRDAQHYQRKMDSASGTSSSELLITHTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPG 618

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEVDRY 838
            PGGV+V EV   S  + W+ G  N  PI+ Y +  R +     W + +   +  E    
Sbjct: 619 PPGGVRVDEVTSDSVRVLWSHGTDNLSPISRYTVQLRESAAQQDWRDAATSPVNVE---- 674

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
            G  E +    L+PW+ YEF+VIA N LG G PS PSP+  T   +P  APS IGGGGG 
Sbjct: 675 -GNAEMATVVNLLPWTEYEFRVIATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGT 733

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
             +L+I+W P+  +     N  Y I ++  ND E+   T+ +   V   V + P     T
Sbjct: 734 SRELTITWTPVQSQYYYGSNFGYIIAFKPHNDPEWLRVTVTD-PEVQKYVHKDPKIPPST 792

Query: 959 EYEVKVQAINDVGPGP 974
            +EVK++A N  G GP
Sbjct: 793 RFEVKMKAFNSQGEGP 808


>gi|193783587|dbj|BAG53498.1| unnamed protein product [Homo sapiens]
          Length = 807

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 203/579 (35%), Positives = 289/579 (49%), Gaps = 19/579 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIP 456
           K    FP+T P A   G  V+LEC A G PVP+  W R  G P+ R A     N IL IP
Sbjct: 7   KIEVQFPETVPTA--KGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIP 64

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           N + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W C+A G P
Sbjct: 65  NFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRP 124

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             TY W +NGE       PL  +DR  I+   L I  +N   D  MYQC A+N+    +S
Sbjct: 125 KPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFS 176

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           +A+L V+ + P F +  L   T    GG V I C P+A+PKP + WKK  +I+    R  
Sbjct: 177 NAELSVIAVGPDFSRTLLRRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERIT 236

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    +
Sbjct: 237 ISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGES 295

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 755
           + L C    +  LD+ + W+ NG  I  + D +  E        G L I N     AG+Y
Sbjct: 296 IVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKY 355

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I A
Sbjct: 356 VCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQA 415

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           RT ++  W  VS   + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 416 RTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPS 470

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  
Sbjct: 471 EKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWML 530

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 531 TVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGP 568



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 147/649 (22%), Positives = 235/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 58  NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 112

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 113 ------NVFWECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCL 166

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 167 AENKHGVIFSNAELSVIAVGPDFSRTLLRRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 226

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 227 DIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 277

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 278 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQD 337

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 338 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 397

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   ++ +  P + IDG     T        EYE  
Sbjct: 398 WRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFR 454

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 455 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 514

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 515 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGE 566

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 567 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 624

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 625 E-DKEENARKIRTVGNQ--TSTKITNLRGSVLYHLAVKAYNSAGTGPSS 670



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 133/328 (40%), Gaps = 60/328 (18%)

Query: 209 LNDITLS--------CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL-- 258
           +NDI ++        C A G P P+Y+W K          N    L+  R  +  G L  
Sbjct: 103 INDIHVAMEENVFWECKANGRPKPTYKWLK----------NGEPLLTRDRIQIEQGTLNI 152

Query: 259 -IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKA 314
            I+N    + D G Y C A NK G I S +         +F+   L+R   +  +  G+ 
Sbjct: 153 TIVN----LSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLRRVTLV--KVGGEV 206

Query: 315 MFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 374
           +    P   P   Y W +    + ++E++R+ +S DG L    + + DAG+Y+C   +  
Sbjct: 207 VIECKPKASPKPVYTWKKGR--DILKENERITISEDGNLRIINVTKSDAGSYTCIATNHF 264

Query: 375 SDTGRNGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP- 429
                 G      P +V        +  P++   T       G+ + L C V   + +  
Sbjct: 265 GTASSTGNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDI 310

Query: 430 SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSV 481
            + W+  G  +  +   ++F R+        L I N++++  G+Y+C        L ++ 
Sbjct: 311 VFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAA 370

Query: 482 TISIQAEPNFTIPLT-DKHMDNQADLTW 508
            + ++  P     +T D+  D  A L+W
Sbjct: 371 DLIVRGPPGPPEAVTIDEITDTTAQLSW 398



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 122/329 (37%), Gaps = 40/329 (12%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 24  VKLECFALGNPVPTIIWRRADG----------KPIARKARRHKSNGILEIPNFQQ-EDAG 72

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            Y C A N  G  ++   QL F     +I + N        N  W     C      P  
Sbjct: 73  LYECVAENSRGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWE----CK-ANGRPKP 126

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            Y W ++  P    +  ++     G L  + +   DAG Y C  ++K      N     +
Sbjct: 127 TYKWLKNGEPLLTRDRIQI---EQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVI 183

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            V P  +   L+             K G +V +EC     P P Y W +    L  N   
Sbjct: 184 AVGPDFSRTLLRRVTLV--------KVGGEVVIECKPKASPKPVYTWKKGRDILKENERI 235

Query: 447 ---ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
              E+ N  L I NV   D G Y C A+N      S+  + ++      +P +   +   
Sbjct: 236 TISEDGN--LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVG 293

Query: 504 ADLTWTCEAF--GVPDVTYSWFRNGELLN 530
             +   C+       D+ ++W  NG L++
Sbjct: 294 ESIVLPCQVTHDHSLDIVFTWSFNGHLID 322


>gi|432092481|gb|ELK25096.1| Contactin-4 [Myotis davidii]
          Length = 1118

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 200/572 (34%), Positives = 288/572 (50%), Gaps = 23/572 (4%)

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYS 367
           Q  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY+
Sbjct: 107 QGQGMVLLCGPPAHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNYT 164

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFG 425
           C V + V++    GP  PL +       +   K    FP T P A   G   RLEC A G
Sbjct: 165 CVVTNTVTNHKVLGPPTPLTLRNDGVMGEYEPKIEVQFPDTVPTA--KGGTARLECFALG 222

Query: 426 YPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP+  W R  G P+ R A     + IL IPN + ED G Y C A N R    +   ++
Sbjct: 223 NPVPTIVWRRADGKPIARKARRHQSDGILEIPNFQQEDAGLYECVAENSRGKNVARGQLT 282

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             A+PN+   ++D  +  +  ++W C A G P  TY W +NGE       PL  QDR  I
Sbjct: 283 FYAQPNWIQKISDIQVAIEDSVSWECRASGRPRPTYRWLKNGE-------PLFAQDRVHI 335

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           +   L I  ++   D  MYQC A+N+    +SSA+L V+   P F +  L+  T    GG
Sbjct: 336 EQGSLNITGVS-LADAGMYQCVAENRHGAVFSSAELSVIAAGPDFSRALLKRVTLVKVGG 394

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           +V I C P+A+PKP + WKK   ++    R  I E+G+L I  V++ D+G Y+C ATN  
Sbjct: 395 DVVIECKPKASPKPIYTWKKGRAVLRESERITISEDGSLRIVNVTKADAGSYTCVATNHF 454

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G   S G L+V   P+     P  + +    ++ L C    +  LD+ + W+ NG RI  
Sbjct: 455 GTASSTGSLVV-KDPTRVTVPPASMDVTVGESIVLTCQVRQDHSLDIVFTWSFNGHRIDF 513

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           N D +  E        G L I N     AG+Y C V+++V ++S    +IV GPPG P  
Sbjct: 514 NRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCTVQTSVDQLSAAADLIVRGPPGPPEA 573

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V + E+  T+A + W+ G  N  P+T Y + ART ++  W  VS        D   GR  
Sbjct: 574 VTIDEITDTTAQLSWSPGPDNHSPVTLYVVQARTPFSVGWQAVS-----TVPDVIDGRTF 628

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
            +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 629 TATVVGLNPWVEYEFRTVAANAIGIGEPSPPS 660



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 137/338 (40%), Gaps = 53/338 (15%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL-SD 248
           P +I++ +D+     + +I + ++  C A G P P+Y W K             +PL + 
Sbjct: 287 PNWIQKISDI-----QVAIEDSVSWECRASGRPRPTYRWLKNG-----------EPLFAQ 330

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPE 305
            R  +  G+L I     + D G Y C A N+ G++ S +         +F+   LKR   
Sbjct: 331 DRVHIEQGSLNITG-VSLADAGMYQCVAENRHGAVFSSAELSVIAAGPDFSRALLKRVTL 389

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 365
           +  +  G  +    P   P   Y W +      + E +R+ +S DG+L    + + DAG+
Sbjct: 390 V--KVGGDVVIECKPKASPKPIYTWKKGRA--VLRESERITISEDGSLRIVNVTKADAGS 445

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP---KAGDKVRLEC- 421
           Y+C   +        G               +K P     T P A      G+ + L C 
Sbjct: 446 YTCVATNHFGTASSTGSLV------------VKDPTRV--TVPPASMDVTVGESIVLTCQ 491

Query: 422 VAFGYPVP-SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASN 472
           V   + +   + W+  G  +  N   ++F R+        L I N++++  G+Y+C    
Sbjct: 492 VRQDHSLDIVFTWSFNGHRIDFNRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCTVQT 551

Query: 473 DRSALESSVTISIQAEPNFTIPLT-DKHMDNQADLTWT 509
               L ++  + ++  P     +T D+  D  A L+W+
Sbjct: 552 SVDQLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWS 589



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 130/325 (40%), Gaps = 36/325 (11%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRGSY 272
           L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G Y
Sbjct: 216 LECFALGNPVPTIVWRRADG----------KPIARKARRHQSDGILEIPNFQQ-EDAGLY 264

Query: 273 HCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR 332
            C A N  G  ++   QL F +     +++  +I         +    +  P   Y W +
Sbjct: 265 ECVAENSRGKNVARG-QLTF-YAQPNWIQKISDIQVAIEDSVSWECRASGRPRPTYRWLK 322

Query: 333 DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392
           +  P F ++  RV +   G+L  + +   DAG Y C  ++      R+G      VF  +
Sbjct: 323 NGEPLFAQD--RVHIE-QGSLNITGVSLADAGMYQCVAEN------RHG-----AVFSSA 368

Query: 393 NFQQLKFPNNFPKTFPE---APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF 449
               +    +F +   +     K G  V +EC     P P Y W ++G  + R +     
Sbjct: 369 ELSVIAAGPDFSRALLKRVTLVKVGGDVVIECKPKASPKPIYTW-KKGRAVLRESERITI 427

Query: 450 NR--ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
           +    L I NV   D G Y C A+N      S+ ++ ++     T+P     +     + 
Sbjct: 428 SEDGSLRIVNVTKADAGSYTCVATNHFGTASSTGSLVVKDPTRVTVPPASMDVTVGESIV 487

Query: 508 WTCEAF--GVPDVTYSWFRNGELLN 530
            TC+       D+ ++W  NG  ++
Sbjct: 488 LTCQVRQDHSLDIVFTWSFNGHRID 512



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%)

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 942
           D P   P+ + GGGG   +L I+WE +P E QN     Y + +R  + T     T+    
Sbjct: 752 DVPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR-PHGTVIWMLTVLASA 810

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +    V R  S   ++ +EV+V   N+ G GP S +
Sbjct: 811 DACRYVFRNESVRPFSPFEVRVGVYNNKGEGPFSPI 846


>gi|55976512|sp|Q8AXZ4.1|CNT1A_DANRE RecName: Full=Contactin-1a; AltName: Full=F3/F11/contactin;
           AltName: Full=Neural cell recognition molecule F11;
           Flags: Precursor
 gi|23345063|gb|AAN17734.1| recognition molecule F3/F11/contactin [Danio rerio]
          Length = 1032

 Score =  325 bits (832), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 235/796 (29%), Positives = 378/796 (47%), Gaps = 42/796 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP D ++   + S    ITL+C     P  SY W   +   + ++A   DP   
Sbjct: 45  GPVFEEQPLDTIY--PEESPEEKITLTCRTRANPPASYRWRLNN--AELVLAEGSDP--- 97

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIG 307
             +++S GNL+I+ P + +  G+Y C ASN++GS+ S   ++ FG++  F+  +R     
Sbjct: 98  -HYSVSEGNLLISSPDKSKHAGNYTCVASNQYGSVTSRRARVQFGYLDMFSTDEREAVYV 156

Query: 308 NQNWGKAMFCDPPTNYP-GVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
            +  G  + C PP ++P  +++ W  + FP F+  D+R FVS   G LY S +   D+GN
Sbjct: 157 KEGQGAVLLCAPPPHFPEDLSFRWMLNEFPEFIPLDQRRFVSQSTGNLYISTVRSTDSGN 216

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P +     K+P +     P++    G  V LEC A 
Sbjct: 217 YSCFVSSPAIAKSVFSKFIPL--VPIAERSLRKYPADIKVKSPDSWALLGQNVTLECFAL 274

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFN-RILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G P+P   W +    LP   +  + +  +L + +++ ED+G Y C A N +        +
Sbjct: 275 GNPIPQIRWRKLDGVLPPLRHDVSMSGALLHLYSLQYEDEGLYECEADNSKGKDWHKTHL 334

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            ++  P++   ++   +D   D   +C+A G P     + +NG +              +
Sbjct: 335 YVEGAPDWLEQISSSEVDIGGDYIMSCQASGKPKPHVHFLKNGHM--------------Y 380

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           ++ + +    L  E D  MYQC A+N+    +++A+LRV    PSF+  P++ +      
Sbjct: 381 MKGHEVRFSRLGFE-DSGMYQCVAENRHGVIHANAELRVFASAPSFQYNPVKPKLLGARN 439

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V   C P AAP+P   W K   ++ +  R  I+ +G+L +  +S+ D G Y+C A N 
Sbjct: 440 GRVVFECRPRAAPRPNITWSKGTELLHNSSRISIWLDGSLELLNISKSDEGKYTCFAEND 499

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   S G L +    +     P    ++   + ++ C A  +  LD+ +IW+ +G  I 
Sbjct: 500 RGRANSTGSLSITDA-TKITLAPSNADVSVGEDARMECVASHDPGLDLTFIWSLDGHTIN 558

Query: 724 -NMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
              D    +    +  G     L IT+     AG Y C  ++ V   +    ++V GPPG
Sbjct: 559 LQRDAQHYQRKMDSASGTSSSELLITHTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPG 618

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEVDRY 838
            PGGV+V EV   S  + W+ G  N  PI+ Y +  R +     W + +   +  E    
Sbjct: 619 PPGGVRVDEVTSDSVRVLWSHGTDNLSPISRYTVQLRESAAQQDWRDAATSPVNVE---- 674

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
            G  E +    L+PW+ YEF+VIA N LG G PS PSP+  T   +P  APS IGGGGG 
Sbjct: 675 -GNAEMATVVNLLPWTEYEFRVIATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGT 733

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
             +L+I+W P+  +     N  Y I ++  ND E+   T+ +       V + P     T
Sbjct: 734 SRELTITWTPVQSQYYYGSNFGYIIAFKPHNDPEWLRVTVTD-PEAQKYVHKDPKIPPST 792

Query: 959 EYEVKVQAINDVGPGP 974
            +EVK++A N  G GP
Sbjct: 793 RFEVKMKAFNSQGEGP 808


>gi|410036468|ref|XP_003950069.1| PREDICTED: contactin-4 [Pan troglodytes]
          Length = 807

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 203/579 (35%), Positives = 290/579 (50%), Gaps = 19/579 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIP 456
           K    FP+T P A   G  V+LEC A G PVP+  W R  G P+ R A     N IL IP
Sbjct: 7   KIEVQFPETVPTA--KGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIP 64

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           N + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W C+A G P
Sbjct: 65  NFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRP 124

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             TY W +NGE       PL  +DR  I+   L I  +N   D  MYQC A+N+    +S
Sbjct: 125 KPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFS 176

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           +A+L V+ + P F +  L+  T    GG V I C P+A+PKP + WKK  +I+    R  
Sbjct: 177 NAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTWKKGRDIVKENERIT 236

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    +
Sbjct: 237 ISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGES 295

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 755
           + L C    +  LD+ + W+ NG  I  + D +  E        G L I N     AG+Y
Sbjct: 296 IVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKY 355

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I A
Sbjct: 356 VCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQA 415

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           RT ++  W  VS   + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 416 RTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPS 470

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  
Sbjct: 471 EKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWML 530

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 531 TVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGP 568



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 145/649 (22%), Positives = 235/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 58  NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 112

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 113 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCL 166

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 167 AENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTWKKGR 226

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           +++       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 227 DIV-------KENERITISED-GNLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 277

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        +E      
Sbjct: 278 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDPYERVGGQD 337

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 338 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 397

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   ++ +  P + IDG     T        EYE  
Sbjct: 398 WRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFR 454

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 455 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 514

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 515 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGE 566

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 567 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 624

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 625 E-DKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 670



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 134/331 (40%), Gaps = 66/331 (19%)

Query: 209 LNDITLS--------CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL-- 258
           +NDI ++        C A G P P+Y W K          N    L+  R  +  G L  
Sbjct: 103 INDIHVAMEENVFWECKANGRPKPTYRWLK----------NGEPLLTRDRIQIEQGTLNI 152

Query: 259 -IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAP--EIGNQNWG 312
            I+N    + D G Y C A NK G I S +         +F+   LKR    ++G +   
Sbjct: 153 TIVN----LSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGE--- 205

Query: 313 KAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS 372
            A+ C P  + P   Y W +    + V+E++R+ +S DG L    + + DAG+Y+C   +
Sbjct: 206 VAIECKPKAS-PKPVYTWKKGR--DIVKENERITISEDGNLRIINVTKSDAGSYTCIATN 262

Query: 373 KVSDTGRNGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-------- 421
                   G      P +V        +  P++   T       G+ + L C        
Sbjct: 263 HFGTASSTGNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSL 308

Query: 422 -VAFGYPVPSY--NWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
            + F +    +  ++ R G P  R    ++   ++ I N++++  G+Y+C        L 
Sbjct: 309 DIVFTWSFNGHLIDFDRDGDPYERVGGQDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLS 367

Query: 479 SSVTISIQAEPNFTIPLT-DKHMDNQADLTW 508
           ++  + ++  P     +T D+  D  A L+W
Sbjct: 368 AAADLIVRGPPGPPEAVTIDEITDTTAQLSW 398



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 122/329 (37%), Gaps = 40/329 (12%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 24  VKLECFALGNPVPTIIWRRADG----------KPIARKARRHKSNGILEIPNFQQ-EDAG 72

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            Y C A N  G  ++   QL F     +I + N        N  W     C      P  
Sbjct: 73  LYECVAENSRGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWE----CK-ANGRPKP 126

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            Y W ++  P    +  ++     G L  + +   DAG Y C  ++K      N     +
Sbjct: 127 TYRWLKNGEPLLTRDRIQI---EQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVI 183

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            V P  +   LK             K G +V +EC     P P Y W +    +  N   
Sbjct: 184 AVGPDFSRTLLKRVTLV--------KVGGEVAIECKPKASPKPVYTWKKGRDIVKENERI 235

Query: 447 ---ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
              E+ N  L I NV   D G Y C A+N      S+  + ++      +P +   +   
Sbjct: 236 TISEDGN--LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVG 293

Query: 504 ADLTWTCEAF--GVPDVTYSWFRNGELLN 530
             +   C+       D+ ++W  NG L++
Sbjct: 294 ESIVLPCQVTHDHSLDIVFTWSFNGHLID 322


>gi|441665503|ref|XP_004091815.1| PREDICTED: contactin-4 [Nomascus leucogenys]
          Length = 807

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 202/579 (34%), Positives = 290/579 (50%), Gaps = 19/579 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIP 456
           K    FP+T P A   G  V+LEC A G PVP+  W R  G P+ R A     N IL IP
Sbjct: 7   KIEVQFPETVPTA--KGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIP 64

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           N + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W C+A G P
Sbjct: 65  NFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRP 124

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             TY W +NGE L +       +DR  I+   L I  +N   D  MYQC A+N+    +S
Sbjct: 125 KPTYRWLKNGEHLQT-------RDRIQIEQGTLNITMVNLS-DAGMYQCLAENKHGVIFS 176

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           +A+L V+ + P F +  L+  T    GG V I C P+A+PKP + WKK  +I+    R  
Sbjct: 177 NAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERIT 236

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    +
Sbjct: 237 ISEDGNLRIINVTKSDAGSYTCVATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGES 295

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 755
           + L C    +  LD+ + W+ NG  I  + D +  E        G L I N     AG+Y
Sbjct: 296 IVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKY 355

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I A
Sbjct: 356 VCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQA 415

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           RT ++  W  VS   + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 416 RTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPS 470

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  
Sbjct: 471 EKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWML 530

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 531 TVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGP 568



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 146/651 (22%), Positives = 235/651 (36%), Gaps = 58/651 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 58  NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 112

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G  L      +     L I  V + D G Y C 
Sbjct: 113 ------NVFWECKANGRPKPTYRWLKNGEHLQTRDRIQIEQGTLNITMVNLSDAGMYQCL 166

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 167 AENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 226

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 227 DIL-------KENERITISED-GNLRIINVTKSDAGSYTCVATNHFGTASSTGNL-VVKD 277

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 278 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQD 337

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 338 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 397

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   ++ +  P + IDG     T        EYE  
Sbjct: 398 WRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFR 454

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 455 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 514

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 515 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGE 566

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 567 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 624

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S +
Sbjct: 625 E-DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSSAI 672



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 132/326 (40%), Gaps = 56/326 (17%)

Query: 209 LNDITLS--------CYAGGYPNPSYEWFKE-DYVQDRLVANLIDPLSDKRFTLSGGNLI 259
           +NDI ++        C A G P P+Y W K  +++Q R            R  +  G L 
Sbjct: 103 INDIHVAMEENVFWECKANGRPKPTYRWLKNGEHLQTR-----------DRIQIEQGTLN 151

Query: 260 INDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMF 316
           I     + D G Y C A NK G I S +         +F+   LKR   +  +  G+ + 
Sbjct: 152 ITM-VNLSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLV--KVGGEVVI 208

Query: 317 CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 376
              P   P   Y W +    + ++E++R+ +S DG L    + + DAG+Y+C   +    
Sbjct: 209 ECKPKASPKPVYTWKKGR--DILKENERITISEDGNLRIINVTKSDAGSYTCVATNHFGT 266

Query: 377 TGRNGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SY 431
               G      P +V        +  P++   T       G+ + L C V   + +   +
Sbjct: 267 ASSTGNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVF 312

Query: 432 NWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSVTI 483
            W+  G  +  +   ++F R+        L I N++++  G+Y+C        L ++  +
Sbjct: 313 TWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADL 372

Query: 484 SIQAEPNFTIPLT-DKHMDNQADLTW 508
            ++  P     +T D+  D  A L+W
Sbjct: 373 IVRGPPGPPEAVTIDEITDTTAQLSW 398



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 123/329 (37%), Gaps = 40/329 (12%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 24  VKLECFALGNPVPTIIWRRADG----------KPIARKARRHKSNGILEIPNFQQ-EDAG 72

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            Y C A N  G  ++   QL F     +I + N        N  W     C      P  
Sbjct: 73  LYECVAENSRGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWE----CK-ANGRPKP 126

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            Y W ++     ++   R+ +   G L  + +   DAG Y C  ++K      N     +
Sbjct: 127 TYRWLKN--GEHLQTRDRIQIE-QGTLNITMVNLSDAGMYQCLAENKHGVIFSNAELSVI 183

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            V P  +   LK             K G +V +EC     P P Y W +    L  N   
Sbjct: 184 AVGPDFSRTLLKRVTLV--------KVGGEVVIECKPKASPKPVYTWKKGRDILKENERI 235

Query: 447 ---ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
              E+ N  L I NV   D G Y C A+N      S+  + ++      +P +   +   
Sbjct: 236 TISEDGN--LRIINVTKSDAGSYTCVATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVG 293

Query: 504 ADLTWTCEAF--GVPDVTYSWFRNGELLN 530
             +   C+       D+ ++W  NG L++
Sbjct: 294 ESIVLPCQVTHDHSLDIVFTWSFNGHLID 322


>gi|297285374|ref|XP_001101217.2| PREDICTED: contactin-4-like isoform 2 [Macaca mulatta]
          Length = 807

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 202/579 (34%), Positives = 290/579 (50%), Gaps = 19/579 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIP 456
           K    FP+T P A   G  V+LEC A G PVP+  W R  G P+ R A     N IL IP
Sbjct: 7   KIEVQFPETVPTA--KGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIP 64

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           N + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W C+A G P
Sbjct: 65  NFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRP 124

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             TY W +NGE       PL  +DR  I+   L I  +N   D  MYQC A+N+    +S
Sbjct: 125 KPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFS 176

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           +A+L V+ + P F +  L+  T    GG V I C P+A+PKP + WKK  +I+    R  
Sbjct: 177 NAELSVIAVGPDFSRTLLKRITLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERIT 236

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    +
Sbjct: 237 ISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGES 295

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 755
           + L C    +  LD+ + W+ NG  I  + D +  E        G L I N     AG+Y
Sbjct: 296 IVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKY 355

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I A
Sbjct: 356 VCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQA 415

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           RT ++  W  V  + + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 416 RTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPS 470

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  
Sbjct: 471 EKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWML 530

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 531 TVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGP 568



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 148/649 (22%), Positives = 235/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 58  NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAMEE 112

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 113 ------NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCL 166

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 167 AENKHGVIFSNAELSVIAVGPDFSRTLLKRITLVKVGGEVVIECKPKASPKPVYTWKKGR 226

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L       ++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 227 DIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 277

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 278 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQD 337

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 338 SAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 397

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 398 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 454

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 455 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 514

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 515 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGE 566

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 567 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRH 624

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 625 E-DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 670



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 134/328 (40%), Gaps = 60/328 (18%)

Query: 209 LNDITLS--------CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL-- 258
           +NDI ++        C A G P P+Y W K          N    L+  R  +  G L  
Sbjct: 103 INDIHVAMEENVFWECKANGRPKPTYRWLK----------NGEPLLTRDRIQIEQGTLNI 152

Query: 259 -IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKA 314
            I+N    + D G Y C A NK G I S +         +F+   LKR   +  +  G+ 
Sbjct: 153 TIVN----LSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRITLV--KVGGEV 206

Query: 315 MFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQ 371
           +    P   P   Y W +    + ++E++R+ +S DG L    + + DAG+Y+C   N  
Sbjct: 207 VIECKPKASPKPVYTWKKGR--DILKENERITISEDGNLRIINVTKSDAGSYTCIATNHF 264

Query: 372 SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP- 429
              S TG      P +V        +  P++   T       G+ + L C V   + +  
Sbjct: 265 GTASSTGNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDI 310

Query: 430 SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSV 481
            + W+  G  +  +   ++F R+        L I N++++  G+Y+C        L ++ 
Sbjct: 311 VFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAA 370

Query: 482 TISIQAEPNFTIPLT-DKHMDNQADLTW 508
            + ++  P     +T D+  D  A L+W
Sbjct: 371 DLIVRGPPGPPEAVTIDEITDTTAQLSW 398



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 122/329 (37%), Gaps = 40/329 (12%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 24  VKLECFALGNPVPTIIWRRADG----------KPIARKARRHKSNGILEIPNFQQ-EDAG 72

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            Y C A N  G  ++   QL F     +I + N        N  W     C      P  
Sbjct: 73  LYECVAENSRGKNVARG-QLTFYAQPNWIQKINDIHVAMEENVFWE----CK-ANGRPKP 126

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            Y W ++  P    +  ++     G L  + +   DAG Y C  ++K      N     +
Sbjct: 127 TYRWLKNGEPLLTRDRIQI---EQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVI 183

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
            V P  +   LK             K G +V +EC     P P Y W +    L  N   
Sbjct: 184 AVGPDFSRTLLKRITLV--------KVGGEVVIECKPKASPKPVYTWKKGRDILKENERI 235

Query: 447 ---ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
              E+ N  L I NV   D G Y C A+N      S+  + ++      +P +   +   
Sbjct: 236 TISEDGN--LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVG 293

Query: 504 ADLTWTCEAF--GVPDVTYSWFRNGELLN 530
             +   C+       D+ ++W  NG L++
Sbjct: 294 ESIVLPCQVTHDHSLDIVFTWSFNGHLID 322


>gi|338714491|ref|XP_003363091.1| PREDICTED: contactin-4 isoform 2 [Equus caballus]
          Length = 807

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 204/579 (35%), Positives = 289/579 (49%), Gaps = 19/579 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIP 456
           K    FP+T P A   G  V+LEC A G PVP+  W R  G P+ R A     N IL IP
Sbjct: 7   KIEVQFPETVPTA--KGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIP 64

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           N + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W C+A G P
Sbjct: 65  NFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEENVFWECKANGRP 124

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             TY W +NGE L +       Q+R  I+   L I  +N   D  MYQC A+N+    +S
Sbjct: 125 KPTYRWLKNGEALLT-------QERIQIEQGTLNITIVNLS-DAGMYQCVAENKHGVIFS 176

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           SA+L V+ L P F +  L+  T    GG V I C P+A+PKP + WKK  +I+    R  
Sbjct: 177 SAELSVIALGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILRENERIS 236

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           I E+G+L I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    +
Sbjct: 237 ISEDGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGES 295

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 755
           + L C    +  LD+ + W+ NG  I  + D +  E        G L I N     AG+Y
Sbjct: 296 IVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKY 355

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C+V++TV K+S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I A
Sbjct: 356 VCMVQTTVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQA 415

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           RT ++  W  V  + + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 416 RTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPS 470

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  
Sbjct: 471 EKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKIIWML 530

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             L    +    V R  S   +  +EVKV   N+ G GP
Sbjct: 531 TVLAS-ADASRYVFRNESVRPFFPFEVKVGVFNNKGEGP 568



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 145/648 (22%), Positives = 232/648 (35%), Gaps = 56/648 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 58  NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAIEE 112

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  V  EC A G P P+Y W + G  L      +     L I  V + D G Y C 
Sbjct: 113 ------NVFWECKANGRPKPTYRWLKNGEALLTQERIQIEQGTLNITIVNLSDAGMYQCV 166

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 167 AENKHGVIFSSAELSVIALGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 226

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L        + +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 227 DIL-------RENERISISED-GSLRIVNVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 277

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 278 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQD 337

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 338 SAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 397

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P + IDG     T        EYE  
Sbjct: 398 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFR 454

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 455 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 514

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+  +E KV   N  G 
Sbjct: 515 -GYVVAFRPYGKIIWMLTV--LASADASRYVFRNES-----VRPFFPFEVKVGVFNNKGE 566

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ + + 
Sbjct: 567 G-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PIEKNRGRIQGYEVKYWRH 624

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 625 DDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTGPSS 670



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 54/323 (16%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL---IINDP 263
           +I  ++   C A G P P+Y W K               L+ +R  +  G L   I+N  
Sbjct: 109 AIEENVFWECKANGRPKPTYRWLKNGEAL----------LTQERIQIEQGTLNITIVN-- 156

Query: 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIG-EFN---LKRAPEIGNQNWGKAMFCDP 319
             + D G Y C A NK G I S S +L+   +G +F+   LKR   +  +  G+ +    
Sbjct: 157 --LSDAGMYQCVAENKHGVIFS-SAELSVIALGPDFSRTLLKRVTLV--KVGGEVVIECK 211

Query: 320 PTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGR 379
           P   P   Y W +    + + E++R+ +S DG+L    + + DAG+Y+C   +       
Sbjct: 212 PKASPKPVYTWKKGR--DILRENERISISEDGSLRIVNVTKSDAGSYTCIATNHFGTASS 269

Query: 380 NGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWT 434
            G      P +V        +  P++   T       G+ + L C V   + +   + W+
Sbjct: 270 TGNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVFTWS 315

Query: 435 RRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
             G  +  +   ++F R+        L I N++++  G+Y+C        L ++  + ++
Sbjct: 316 FNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVR 375

Query: 487 AEPNFTIPLT-DKHMDNQADLTW 508
             P     +T D+  D  A L+W
Sbjct: 376 GPPGPPEAVTIDEITDTTAQLSW 398



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 145/387 (37%), Gaps = 52/387 (13%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 24  VKLECFALGNPVPTIIWRRADG----------KPIARKARRHKSNGILEIPNFQQ-EDAG 72

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            Y C A N  G  ++   QL F     +I + N        N  W     C      P  
Sbjct: 73  LYECVAENSRGKNVARG-QLTFYAQPNWIQKINDIHVAIEENVFWE----CK-ANGRPKP 126

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            Y W ++      +E  ++     G L  + +   DAG Y C  ++K             
Sbjct: 127 TYRWLKNGEALLTQERIQI---EQGTLNITIVNLSDAGMYQCVAENKHG----------- 172

Query: 387 KVFPHSNFQQLKFPNNFPKTFPE---APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
            +F  +    +    +F +T  +     K G +V +EC     P P Y W +    L  N
Sbjct: 173 VIFSSAELSVIALGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILREN 232

Query: 444 AYFE-NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
                + +  L I NV   D G Y C A+N      S+  + ++      +P +   +  
Sbjct: 233 ERISISEDGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTV 292

Query: 503 QADLTWTCEAF--GVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNV--LTIRYLN 555
              +   C+       D+ ++W  NG L++ +    +D D   R   QD+   L IR + 
Sbjct: 293 GESIVLPCQVTHDHSLDIVFTWSFNGHLIDFD----KDGDHFERVGGQDSAGDLMIRNIQ 348

Query: 556 PERDPAMYQCRAKNQLKTRYSSAQLRV 582
             +    Y C  +  +    ++A L V
Sbjct: 349 -LKHAGKYVCMVQTTVDKLSAAADLIV 374


>gi|283046667|ref|NP_001028531.2| contactin-5 isoform 2 precursor [Mus musculus]
          Length = 893

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 210/658 (31%), Positives = 314/658 (47%), Gaps = 23/658 (3%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y C V++ V++     P  
Sbjct: 20  IIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPT 79

Query: 385 PLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
           PL +       +   K   +FP T   A   G  V++EC A G PVP+  W +    +P 
Sbjct: 80  PLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFALGNPVPTITWMKVNGYIPS 137

Query: 443 NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
            +       +L IPN++++D G Y C A N R        + I   P++   L D  +D+
Sbjct: 138 KSRLRKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKLNDTQLDS 197

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
            + L W C+A G P  TY W +NG        PL  Q R    + +L I+ +N + D  M
Sbjct: 198 GSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTVNGILAIQSVN-QSDAGM 249

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC A+N+    Y+SA+L++L   PSF+   ++      +   V I C P+ +PKP   W
Sbjct: 250 YQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPAISW 309

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +K    + +  R  I  +G+L I   S+ D G Y C   N+ G  E    L V   P+  
Sbjct: 310 RKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-PTRI 368

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 741
           E  P +  +    ++ L C A  +  LDV + WT  G  I    +    E          
Sbjct: 369 ELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFENIRAQASSAD 428

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
           L I N     AG Y C V++T   +S +  ++V GPPG PG V V E+ +++AT+ W+  
Sbjct: 429 LMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWSPA 488

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKV 860
             N  PI+ Y + AR+ ++  W  V      K V +  TG  E+++   L PW  YEF+V
Sbjct: 489 TDNHSPISSYNLQARSPFSLGWQTV------KTVPEVITGDMESAMAVDLNPWVEYEFRV 542

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G G+PS PS    T    P  APS + G  G+  +L I+WEP+  E QN     
Sbjct: 543 VATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGFG 602

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           Y + +R  N T    E +         + R  S    T +EVKV   N+ G GP S++
Sbjct: 603 YIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 659



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 125/338 (36%), Gaps = 53/338 (15%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P+++++  D   D       + +   C A G P P+Y W K          N    L   
Sbjct: 184 PHWVQKLNDTQLDSG-----SPLQWECKATGKPRPTYRWLK----------NGAPLLPQS 228

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE--IG 307
           R     G L I    Q  D G Y C A NK+G+I + +          F L +  +  I 
Sbjct: 229 RVDTVNGILAIQSVNQ-SDAGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIV 287

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
            ++ G  + C+ P   P     W +      V  +KR+ +  DG+L      + D G Y 
Sbjct: 288 TKDRGVLIECE-PQGSPKPAISWRKG--DKAVRANKRIAILPDGSLRILNASKADEGKYI 344

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-----AGDKVRLECV 422
           C         G N  F   ++    + ++       P      PK      G+ + L C 
Sbjct: 345 CQ--------GVN-IFGSAEIIASLSVKE-------PTRIELTPKRTELTVGESIVLNCK 388

Query: 423 AF--GYPVPSYNWTRRGSPL---PRNAYFENF-----NRILTIPNVKVEDQGEYICRASN 472
           A        ++ WT +G P+       +FEN      +  L I N+ +   G Y CR   
Sbjct: 389 AIHDASLDVTFYWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQT 448

Query: 473 DRSALESSVTISIQAEPN-FTIPLTDKHMDNQADLTWT 509
              ++     + ++  P    + + ++  ++ A L+W+
Sbjct: 449 TADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWS 486



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 126/334 (37%), Gaps = 47/334 (14%)

Query: 212 ITLSCYAGGYPNPSYEWFKED-YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           + + C+A G P P+  W K + Y+  +        L   +  L   NL      Q++D G
Sbjct: 112 VKMECFALGNPVPTITWMKVNGYIPSK------SRLRKSQAVLEIPNL------QLDDAG 159

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP-------TNY 323
            Y C A N  G            F G+  +   P    +     +    P       T  
Sbjct: 160 IYECTAENSRGK---------NSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQWECKATGK 210

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P   Y W ++  P   +   RV  + +G L   ++ Q DAG Y C  ++K      +   
Sbjct: 211 PRPTYRWLKNGAPLLPQ--SRVD-TVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAEL 267

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
             L   P     Q+K      K+       G  V +EC   G P P+ +W +    +  N
Sbjct: 268 KILASPPSFELNQVK------KSIIVTKDRG--VLIECEPQGSPKPAISWRKGDKAVRAN 319

Query: 444 AYFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
                  +  L I N    D+G+YIC+  N   + E   ++S++ EP   I LT K  + 
Sbjct: 320 KRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVK-EPT-RIELTPKRTEL 377

Query: 503 QA--DLTWTCEAF--GVPDVTYSWFRNGELLNSE 532
                +   C+A      DVT+ W   G+ ++ E
Sbjct: 378 TVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 411


>gi|74209635|dbj|BAE23567.1| unnamed protein product [Mus musculus]
          Length = 893

 Score =  322 bits (825), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 210/658 (31%), Positives = 314/658 (47%), Gaps = 23/658 (3%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y C V++ V++     P  
Sbjct: 20  IIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPT 79

Query: 385 PLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
           PL +       +   K   +FP T   A   G  V++EC A G PVP+  W +    +P 
Sbjct: 80  PLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFALGNPVPTITWMKVNGYIPS 137

Query: 443 NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
            +       +L IPN++++D G Y C A N R        + I   P++   L D  +D+
Sbjct: 138 KSRLRKSQAVLEIPNLQLDDAGIYGCTAENSRGKNSFRGQLQIFTYPHWVQKLNDTQLDS 197

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
            + L W C+A G P  TY W +NG        PL  Q R    + +L I+ +N + D  M
Sbjct: 198 GSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTVNGILAIQSVN-QSDAGM 249

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC A+N+    Y+SA+L++L   PSF+   ++      +   V I C P+ +PKP   W
Sbjct: 250 YQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPAISW 309

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +K    + +  R  I  +G+L I   S+ D G Y C   N+ G  E    L V   P+  
Sbjct: 310 RKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-PTRI 368

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 741
           E  P +  +    ++ L C A  +  LDV + WT  G  I    +    E          
Sbjct: 369 ELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFGKEGGHFENIRAQASSAD 428

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
           L I N     AG Y C V++T   +S +  ++V GPPG PG V V E+ +++AT+ W+  
Sbjct: 429 LMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWSPA 488

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKV 860
             N  PI+ Y + AR+ ++  W  V      K V +  TG  E+++   L PW  YEF+V
Sbjct: 489 TDNHSPISSYNLQARSPFSLGWQTV------KTVPEVITGDMESAMAVDLNPWVEYEFRV 542

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G G+PS PS    T    P  APS + G  G+  +L I+WEP+  E QN     
Sbjct: 543 VATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGFG 602

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           Y + +R  N T    E +         + R  S    T +EVKV   N+ G GP S++
Sbjct: 603 YIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 659



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 125/338 (36%), Gaps = 53/338 (15%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P+++++  D   D       + +   C A G P P+Y W K          N    L   
Sbjct: 184 PHWVQKLNDTQLDSG-----SPLQWECKATGKPRPTYRWLK----------NGAPLLPQS 228

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE--IG 307
           R     G L I    Q  D G Y C A NK+G+I + +          F L +  +  I 
Sbjct: 229 RVDTVNGILAIQSVNQ-SDAGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIV 287

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
            ++ G  + C+ P   P     W +      V  +KR+ +  DG+L      + D G Y 
Sbjct: 288 TKDRGVLIECE-PQGSPKPAISWRKG--DKAVRANKRIAILPDGSLRILNASKADEGKYI 344

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-----AGDKVRLECV 422
           C         G N  F   ++    + ++       P      PK      G+ + L C 
Sbjct: 345 CQ--------GVN-IFGSAEIIASLSVKE-------PTRIELTPKRTELTVGESIVLNCK 388

Query: 423 AF--GYPVPSYNWTRRGSPL---PRNAYFENF-----NRILTIPNVKVEDQGEYICRASN 472
           A        ++ WT +G P+       +FEN      +  L I N+ +   G Y CR   
Sbjct: 389 AIHDASLDVTFYWTLKGQPIDFGKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQT 448

Query: 473 DRSALESSVTISIQAEPN-FTIPLTDKHMDNQADLTWT 509
              ++     + ++  P    + + ++  ++ A L+W+
Sbjct: 449 TADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWS 486



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 125/332 (37%), Gaps = 47/332 (14%)

Query: 212 ITLSCYAGGYPNPSYEWFKED-YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           + + C+A G P P+  W K + Y+  +        L   +  L   NL      Q++D G
Sbjct: 112 VKMECFALGNPVPTITWMKVNGYIPSK------SRLRKSQAVLEIPNL------QLDDAG 159

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP-------TNY 323
            Y C A N  G            F G+  +   P    +     +    P       T  
Sbjct: 160 IYGCTAENSRGK---------NSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQWECKATGK 210

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P   Y W ++  P   +   RV  + +G L   ++ Q DAG Y C  ++K      +   
Sbjct: 211 PRPTYRWLKNGAPLLPQ--SRVD-TVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAEL 267

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
             L   P     Q+K      K+       G  V +EC   G P P+ +W +    +  N
Sbjct: 268 KILASPPSFELNQVK------KSIIVTKDRG--VLIECEPQGSPKPAISWRKGDKAVRAN 319

Query: 444 AYFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
                  +  L I N    D+G+YIC+  N   + E   ++S++ EP   I LT K  + 
Sbjct: 320 KRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVK-EPT-RIELTPKRTEL 377

Query: 503 QA--DLTWTCEAF--GVPDVTYSWFRNGELLN 530
                +   C+A      DVT+ W   G+ ++
Sbjct: 378 TVGESIVLNCKAIHDASLDVTFYWTLKGQPID 409


>gi|74184167|dbj|BAE37085.1| unnamed protein product [Mus musculus]
          Length = 893

 Score =  322 bits (825), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 210/658 (31%), Positives = 314/658 (47%), Gaps = 23/658 (3%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y C V++ V++     P  
Sbjct: 20  IIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPT 79

Query: 385 PLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
           PL +       +   K   +FP T   A   G  V++EC A G PVP+  W +    +P 
Sbjct: 80  PLTLRNDGVMGEYEPKIEVHFPFTVTAA--KGTTVKMECFALGNPVPTITWMKVNGYIPS 137

Query: 443 NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
            +       +L IPN++++D G Y C A N R        + I   P++   L D  +D+
Sbjct: 138 KSRLRKSQAVLEIPNLQLDDAGIYGCTAENSRGKNSFRGQLQIFTYPHWVQKLNDTQLDS 197

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
            + L W C+A G P  TY W +NG        PL  Q R    + +L I+ +N + D  M
Sbjct: 198 GSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTVNGILAIQSVN-QSDAGM 249

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC A+N+    Y+SA+L++L   PSF+   ++      +   V I C P+ +PKP   W
Sbjct: 250 YQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPAISW 309

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +K    + +  R  I  +G+L I   S+ D G Y C   N+ G  E    L V   P+  
Sbjct: 310 RKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-PTRI 368

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 741
           E  P +  +    ++ L C A  +  LDV + WT  G  I    +    E          
Sbjct: 369 ELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFENIRAQASSAD 428

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
           L I N     AG Y C V++T   +S +  ++V GPPG PG V V E+ +++AT+ W+  
Sbjct: 429 LMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWSPA 488

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKV 860
             N  PI+ Y + AR+ ++  W  V      K V +  TG  E+++   L PW  YEF+V
Sbjct: 489 TDNHSPISSYNLQARSPFSLGWQTV------KTVPEVITGDMESAMAVDLNPWVEYEFRV 542

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G G+PS PS    T    P  APS + G  G+  +L I+WEP+  E QN     
Sbjct: 543 VATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGFG 602

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           Y + +R  N T    E +         + R  S    T +EVKV   N+ G GP S++
Sbjct: 603 YIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 659



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 125/338 (36%), Gaps = 53/338 (15%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P+++++  D   D       + +   C A G P P+Y W K          N    L   
Sbjct: 184 PHWVQKLNDTQLDSG-----SPLQWECKATGKPRPTYRWLK----------NGAPLLPQS 228

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE--IG 307
           R     G L I    Q  D G Y C A NK+G+I + +          F L +  +  I 
Sbjct: 229 RVDTVNGILAIQSVNQ-SDAGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIV 287

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
            ++ G  + C+ P   P     W +      V  +KR+ +  DG+L      + D G Y 
Sbjct: 288 TKDRGVLIECE-PQGSPKPAISWRKG--DKAVRANKRIAILPDGSLRILNASKADEGKYI 344

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-----AGDKVRLECV 422
           C         G N  F   ++    + ++       P      PK      G+ + L C 
Sbjct: 345 CQ--------GVN-IFGSAEIIASLSVKE-------PTRIELTPKRTELTVGESIVLNCK 388

Query: 423 AF--GYPVPSYNWTRRGSPL---PRNAYFENF-----NRILTIPNVKVEDQGEYICRASN 472
           A        ++ WT +G P+       +FEN      +  L I N+ +   G Y CR   
Sbjct: 389 AIHDASLDVTFYWTLKGQPIDFEKEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQT 448

Query: 473 DRSALESSVTISIQAEPN-FTIPLTDKHMDNQADLTWT 509
              ++     + ++  P    + + ++  ++ A L+W+
Sbjct: 449 TADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWS 486



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 126/334 (37%), Gaps = 47/334 (14%)

Query: 212 ITLSCYAGGYPNPSYEWFKED-YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           + + C+A G P P+  W K + Y+  +        L   +  L   NL      Q++D G
Sbjct: 112 VKMECFALGNPVPTITWMKVNGYIPSK------SRLRKSQAVLEIPNL------QLDDAG 159

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP-------TNY 323
            Y C A N  G            F G+  +   P    +     +    P       T  
Sbjct: 160 IYGCTAENSRGK---------NSFRGQLQIFTYPHWVQKLNDTQLDSGSPLQWECKATGK 210

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P   Y W ++  P   +   RV  + +G L   ++ Q DAG Y C  ++K      +   
Sbjct: 211 PRPTYRWLKNGAPLLPQ--SRVD-TVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAEL 267

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
             L   P     Q+K      K+       G  V +EC   G P P+ +W +    +  N
Sbjct: 268 KILASPPSFELNQVK------KSIIVTKDRG--VLIECEPQGSPKPAISWRKGDKAVRAN 319

Query: 444 AYFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
                  +  L I N    D+G+YIC+  N   + E   ++S++ EP   I LT K  + 
Sbjct: 320 KRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVK-EPT-RIELTPKRTEL 377

Query: 503 QA--DLTWTCEAF--GVPDVTYSWFRNGELLNSE 532
                +   C+A      DVT+ W   G+ ++ E
Sbjct: 378 TVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 411


>gi|158260111|dbj|BAF82233.1| unnamed protein product [Homo sapiens]
          Length = 627

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 208/645 (32%), Positives = 315/645 (48%), Gaps = 37/645 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ ++W+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 788
           I NA    AG Y C  ++ V   S    ++V G     G + +V+
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGKNRKGGEINMVD 614


>gi|432114566|gb|ELK36414.1| Contactin-1 [Myotis davidii]
          Length = 1034

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 232/740 (31%), Positives = 345/740 (46%), Gaps = 89/740 (12%)

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
           L+  R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+           
Sbjct: 25  LTSDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGIVRSTEATLSFGY----------- 73

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAG 364
                               ++Y W  + FP F+  DKR FVS  +G LY + +E  D G
Sbjct: 74  -------------------DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKG 114

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVA 423
           NYSC V S          F PL   P    +   +P +    F +     G  V LEC A
Sbjct: 115 NYSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIYALMGQNVTLECFA 172

Query: 424 FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
            G PVP   W +   P+P  A       +L I N+++ED+G Y C A N +        I
Sbjct: 173 LGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIKGKDRHQGRI 232

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS-ETLPLEDQDRY 542
            +QA P +   + D  +D  +DL W C A G P  T  W +NG + +      L   D  
Sbjct: 233 YVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYVYHQYHKGELRLYDVT 292

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
           F               +  MYQC A+N     Y++A+L++L L P+F+  P++ +  A +
Sbjct: 293 F--------------ENAGMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAK 338

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSCT 659
           GG V I C P+AAPKPKF W K    + +G   GR        LLI  +SR     Y+  
Sbjct: 339 GGRVIIECKPKAAPKPKFSWSKGTEWLVNGSSPGRV------TLLIRAMSR-----YTKD 387

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
            T          R+I+          P    +    N  ++C+A  +  LD+ ++W+ NG
Sbjct: 388 PT----------RIILA---------PLNADVTVGENATMQCAASFDPALDLTFVWSFNG 428

Query: 720 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             I     N     N  +D  G L I NA    AG Y C  ++ V   S    ++V GPP
Sbjct: 429 YVIDFNKENIHYRRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 488

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 838
           G PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +        +    
Sbjct: 489 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPII 543

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
            G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +GGGGG 
Sbjct: 544 EGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIRTDGAAPNVAPSDVGGGGGS 603

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
             +L+I+W PL RE     N  Y + ++  +  E++  T+    ++G  V +  +   +T
Sbjct: 604 NRELTITWAPLSREYHYGNNFGYVVAFKPFDGEEWKKVTVTN-PDIGRYVHKDETMRPFT 662

Query: 959 EYEVKVQAINDVGPGPESEV 978
            ++VKV+A N+ G GP S +
Sbjct: 663 AFQVKVKAFNNKGDGPYSLI 682


>gi|410046837|ref|XP_003952269.1| PREDICTED: contactin-1 [Pan troglodytes]
 gi|410046839|ref|XP_003952270.1| PREDICTED: contactin-1 [Pan troglodytes]
          Length = 627

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 206/633 (32%), Positives = 310/633 (48%), Gaps = 37/633 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ ++W+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           I NA    AG Y C  ++ V   S    ++V G
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 602


>gi|366039949|ref|NP_001242992.1| contactin-1 isoform 3 precursor [Homo sapiens]
 gi|366039951|ref|NP_001242993.1| contactin-1 isoform 3 precursor [Homo sapiens]
 gi|22477205|gb|AAH36569.1| CNTN1 protein [Homo sapiens]
 gi|158260419|dbj|BAF82387.1| unnamed protein product [Homo sapiens]
          Length = 627

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 206/633 (32%), Positives = 310/633 (48%), Gaps = 37/633 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ ++W+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           I NA    AG Y C  ++ V   S    ++V G
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 602



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 162/441 (36%), Gaps = 63/441 (14%)

Query: 359 EQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAG 414
           +Q DAG Y C   N    V  T     F  L  FP             P+  PE   K G
Sbjct: 105 KQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFP-------------PEERPEVRVKEG 151

Query: 415 DKVRLEC-VAFGYPVP-SYNWTRRGSP----LPRNAYFENFNRILTIPNVKVEDQGEYIC 468
             + L C   + +P   SY W     P    + +  +    N  L I NV+  D+G Y C
Sbjct: 152 KGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSC 211

Query: 469 RASNDRSALESSVTISIQAEP-----------NFTIPLTDKHMDNQADLTWTCEAFGVPD 517
             S+  S  +S  +  I   P           +  +   D +     ++T  C A G P 
Sbjct: 212 FVSSP-SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV 270

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
               W +  E       P+           VL I  +  E D  +Y+C A+N        
Sbjct: 271 PDIRWRKVLE-------PMPSTAEISTSGAVLKIFNIQLE-DEGIYECEAENIRGKDKHQ 322

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
           A++ V    P + +   ++E     G ++   C     P P   W K+G           
Sbjct: 323 ARIYVQAF-PEWVEHINDTEV--DIGSDLYWPCVATGKPIPTIRWLKNG---------YA 370

Query: 638 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
           +  G L +  V+ +++G+Y C A N +G   +   L +L     +E  P K  I A +  
Sbjct: 371 YHKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGG 430

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYE 756
           ++      +      + W+     + N       +  I I + G LEI N +  D G Y 
Sbjct: 431 RVIIECKPKAAPKPKFSWSKGTEWLVN-------SSRILIWEDGSLEINNITRNDGGIYT 483

Query: 757 CVVKSTVGKISTKTTVIVEGP 777
           C  ++  GK ++  T+++  P
Sbjct: 484 CFAENNRGKANSTGTLVITDP 504


>gi|256089229|ref|XP_002580716.1| contactin; neuroglian; septate junction protein [Schistosoma
           mansoni]
          Length = 1163

 Score =  320 bits (820), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 259/926 (27%), Positives = 423/926 (45%), Gaps = 102/926 (11%)

Query: 119 LPEPADNVQ----RDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTY 174
           +P+PA+       R  L Y   ++  RWG+   T       IC A +   + LL   ++ 
Sbjct: 33  IPKPAERPTFPKVRTRLVYGTDRN--RWGWYLDTPTAHRGHICRAPVANANQLLPLSKSL 90

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
            YG D   P+++ RGP FI  P DV++ +   S      L C A G P P+Y+W+   YV
Sbjct: 91  AYGSDF--PNRMARGPCFIAHPKDVLY-VHHMSTEKYAELRCEANGNPQPTYKWY---YV 144

Query: 235 QDRLVAN------------LIDPLSDK--RFTLSGGNLIINDPRQVEDRGSYHCKASNKF 280
              +  N            LID  ++   R ++S G+L+I++P    D   + C+A N +
Sbjct: 145 STEMRTNSTGDTITILHRTLIDAAAEPSGRISISAGSLVIHNPDTSTDSQMFQCEAKNIY 204

Query: 281 GSIISESVQLAFGFIGEFNLKRAPE------IGNQNWGKAMFCDPPTNYPGVNYYWAR-- 332
           GSI+S + ++ FG      L+ AP+      I   +  + + C+PP + P  +  +    
Sbjct: 205 GSILSRTARIIFG-----QLETAPKQPRNERIVMSHQSETLPCEPPAHSPPDSLLYTVYM 259

Query: 333 ----DYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQ-----SKVSDTGRNGP 382
               +  P   E  + +F+S   G + FS +  +D+G Y C +       ++ D+ +  P
Sbjct: 260 NKNGELEPVLPEYRRNLFISQAKGLIGFSEVTVVDSGVYVCMITMQFDGHRMYDSPKL-P 318

Query: 383 FFPLKV-FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP---SYNWTRR-G 437
             P  V + +   Q  +  ++FP  +P  P+ G  VRLEC A GY       Y+W R  G
Sbjct: 319 DMPFTVRYSNEPRQDPRIYDDFPAVWPTNPQRGQLVRLECFAAGYSQLDGLKYSWRRLDG 378

Query: 438 SPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND--RSALESSVTISIQAEPNFTIPL 495
           +PL R    ++++R++ +PNV+ EDQGEY C   +   + A   ++ + I A+P FT PL
Sbjct: 379 APL-RTDSLKDYDRVIELPNVQPEDQGEYECNVEDSLGKMARPKTLNLKITAKPYFTTPL 437

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS--ETLPLEDQDRYFIQDNVLT--- 550
            +  +D  +D+  TCEA G+P+ T+ W+RN   ++    T  L       I+D  L+   
Sbjct: 438 QNTVVDINSDVFLTCEASGIPNPTHEWYRNDITVSQLIATGKLNPTQYTIIRDGSLSHSF 497

Query: 551 --IRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
             + +     D  M+ C A N L +  SSA++RVL L P+F+K P+        G    +
Sbjct: 498 FILLFQVKLSDSGMFTCLAWNSLGSEASSAEVRVLELAPTFRKHPVMPNE-GMVGSTAVM 556

Query: 609 FCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR------DDSGIYSCTATN 662
            C PE AP     W  DG ++ +        NG++ + P  R       D  +  C   N
Sbjct: 557 ECQPEGAPAMTVEWLHDGTVLTTSDTLMNVSNGDVDLLPGERLVDLEYADDIVLLC--DN 614

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
              M  +  +L  +    Y     P            +C    ++  D   + T +  R 
Sbjct: 615 AQAMQSALNQL-AISVRRYGMCFAPS-----------KCKVLLQDWQDSHPVLTLDDAR- 661

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
              +L +L  P  N   G L+I N  F ++G Y C  ++ +   S+   + + GPPG  G
Sbjct: 662 -RYELAQLYRPYGNY-FGTLKIVNVQFENSGNYTCAAETPLNSQSSSGVIRIAGPPGPCG 719

Query: 783 GVQVVEVH--KTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHV--IGKEVD 836
           GV VV+ H       + W  G ++   I +++I A   ++  + W  ++ +V     ++ 
Sbjct: 720 GV-VVDPHVGVDRVNVSWAVGTSHLFQILYFQIEANAMYDPPNQWMIMASNVSISSTKLL 778

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
           + + R+   + N L     Y  +V AGN LG GEPS PS  + T   KP   P  + GGG
Sbjct: 779 KPSDRRMTVVRN-LAANMAYRIRVRAGNALGLGEPSPPSLSFTTLPTKPTLIPQNVTGGG 837

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-----SETLKEYGNVGIAVVRI 951
           GK G L   W PL R  +N PN +Y+   + K + E+      +  + + G      + +
Sbjct: 838 GKHGTLVFKWIPLKRVNENGPNFHYRAHIKAKENAEYSIHDLWTAKMSDDGKFMQYTLTL 897

Query: 952 PSEFYYTEYEVKVQAINDVGPGPESE 977
               +Y  Y+V VQA+N  G GP SE
Sbjct: 898 GDNLFYKPYDVMVQAVNSEGAGPLSE 923


>gi|410972405|ref|XP_003992650.1| PREDICTED: contactin-5-like, partial [Felis catus]
          Length = 680

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 206/648 (31%), Positives = 313/648 (48%), Gaps = 21/648 (3%)

Query: 335 FPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393
           FP+FV ED R F+S + G LY S ++  D G+Y C V++ V++     P  PL +     
Sbjct: 4   FPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGV 63

Query: 394 FQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNR 451
             +   K   +FP T   A   G  V++EC A G PVP+  W +    +P  A       
Sbjct: 64  MGEYEPKIEVHFPFTVTAA--KGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQA 121

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE 511
           +L IPNV+++D G Y CRA N R        + +   P++   L D  +D+ + L W C+
Sbjct: 122 VLEIPNVQLDDAGLYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECK 181

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQL 571
           A G P  TY W +NG  L    LP   Q+R  + + VL I  +N + D  MYQC A+N+ 
Sbjct: 182 ATGKPRPTYRWLKNGVSL----LP---QNRIEMVNGVLMIHNVN-QSDAGMYQCLAENKY 233

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS 631
              ++SA+L++L   P+F    ++      +   V I C P+ +PKP   WKK    +  
Sbjct: 234 GAIFASAELKILASAPTFALNQMKKTIIITKDQEVIIQCKPQGSPKPTISWKKGDKAVRE 293

Query: 632 GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 691
             R  I  +G+L I   S+ D G Y C   NV G  E+   + V   P+  E  P +  +
Sbjct: 294 NKRIAILPDGSLRILNASKSDEGKYVCQGENVFGSAETIASVSVKE-PTRIELTPKRTEL 352

Query: 692 AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFA 750
               ++ L C A  +  LDV + WT  G  I    +    E+         L I N    
Sbjct: 353 TVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLM 412

Query: 751 DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 810
            AG Y C V++T   +S +  ++V GPPG PG V V ++ +++AT+ W+  + N  PI+ 
Sbjct: 413 HAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEDITESTATLSWSPASDNHSPISS 472

Query: 811 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
           Y + AR+ ++  W       +    +  TG  E+++   L PW  YEF+V+A N +G G+
Sbjct: 473 YNLQARSPFSLGW-----QTVKTIPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGD 527

Query: 871 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930
           PS+PS    T    P  AP+ + G  G+  +L I+WEP+  E QN     Y + +R  N 
Sbjct: 528 PSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNG 586

Query: 931 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           T    E +         + R  S    T +EVKV   N+ G GP S++
Sbjct: 587 TRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 634



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 53/338 (15%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P+++++  D   D       + +   C A G P P+Y W K          N +  L   
Sbjct: 159 PHWVEKLNDTQLDSG-----SPLRWECKATGKPRPTYRWLK----------NGVSLLPQN 203

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSII--SESVQLAFGFIGEFNLKRAPEIG 307
           R  +  G L+I++  Q  D G Y C A NK+G+I   +E   LA       N  +   I 
Sbjct: 204 RIEMVNGVLMIHNVNQ-SDAGMYQCLAENKYGAIFASAELKILASAPTFALNQMKKTIII 262

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
            ++    + C  P   P     W +      V E+KR+ +  DG+L      + D G Y 
Sbjct: 263 TKDQEVIIQCK-PQGSPKPTISWKKG--DKAVRENKRIAILPDGSLRILNASKSDEGKYV 319

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-----AGDKVRLECV 422
           C         G N  F   +     + ++       P      PK      G+ + L C 
Sbjct: 320 CQ--------GEN-VFGSAETIASVSVKE-------PTRIELTPKRTELTVGESIVLNCK 363

Query: 423 AF--GYPVPSYNWTRRGSPL---PRNAYFENF-----NRILTIPNVKVEDQGEYICRASN 472
           A        ++ WT +G P+       +FE+      +  L I N+ +   G Y CR   
Sbjct: 364 AIHDASLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQT 423

Query: 473 DRSALESSVTISIQAEPN-FTIPLTDKHMDNQADLTWT 509
              ++     + ++  P    I + +   ++ A L+W+
Sbjct: 424 TADSVSDEAELLVRGPPGPPGIVIVEDITESTATLSWS 461


>gi|403269332|ref|XP_003926703.1| PREDICTED: contactin-1 isoform 3 [Saimiri boliviensis boliviensis]
 gi|403269334|ref|XP_003926704.1| PREDICTED: contactin-1 isoform 4 [Saimiri boliviensis boliviensis]
          Length = 627

 Score =  319 bits (818), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 201/607 (33%), Positives = 301/607 (49%), Gaps = 36/607 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S+   ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    +D  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNSYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 373 KGELRLYD------------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C A N  G   S G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 477 NDGGIYTCFAENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + ++W+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 536 LTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTCTAQTIVDNSSAS 595

Query: 770 TTVIVEG 776
             ++V G
Sbjct: 596 ADLVVRG 602



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 162/441 (36%), Gaps = 63/441 (14%)

Query: 359 EQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAG 414
           +Q DAG Y C   N    V  T     F  L  FP             P+  PE   K G
Sbjct: 105 KQKDAGIYYCLASNSYGMVRSTEATLSFGYLDPFP-------------PEERPEVRVKEG 151

Query: 415 DKVRLEC-VAFGYPVP-SYNWTRRGSP----LPRNAYFENFNRILTIPNVKVEDQGEYIC 468
             + L C   + +P   SY W     P    + +  +    N  L I NV+  D+G Y C
Sbjct: 152 KGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSC 211

Query: 469 RASNDRSALESSVTISIQAEP-----------NFTIPLTDKHMDNQADLTWTCEAFGVPD 517
             S+  S  +S  +  I   P           +  +   D +     ++T  C A G P 
Sbjct: 212 FVSSP-SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPV 270

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
               W +  E       P+           VL I  +  E D  +Y+C A+N        
Sbjct: 271 PDIRWRKVLE-------PMPSTAEISTSGAVLKIFNIQLE-DEGIYECEAENIRGKDKHQ 322

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
           A++ V    P + +   ++E     G ++   C     P P   W K+G           
Sbjct: 323 ARIYVQAF-PEWVEHINDTEV--DIGSDLYWPCVATGKPIPTIRWLKNG---------YA 370

Query: 638 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
           +  G L +  V+ +++G+Y C A N HG   +   L +L     +E  P K  I A +  
Sbjct: 371 YHKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGG 430

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYE 756
           ++      +      + W+     + N       +  I I + G LEI N +  D G Y 
Sbjct: 431 RVIIECKPKAAPKPKFSWSKGTEWLVN-------SSRILIWEDGSLEINNITRNDGGIYT 483

Query: 757 CVVKSTVGKISTKTTVIVEGP 777
           C  ++  GK ++  T+++  P
Sbjct: 484 CFAENNRGKANSTGTLVITDP 504


>gi|410964137|ref|XP_003988612.1| PREDICTED: contactin-1 isoform 3 [Felis catus]
 gi|410964139|ref|XP_003988613.1| PREDICTED: contactin-1 isoform 4 [Felis catus]
          Length = 627

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 207/633 (32%), Positives = 310/633 (48%), Gaps = 37/633 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I      L++   Y+ YG  +   DK   GP F +QP + ++   + S 
Sbjct: 1   MKMWLLVSHLVIISFTTCLSEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESP 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    ID  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDIDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPLPERTTK--PYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N+R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   + G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ +IW+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           I NA    AG Y C  ++ V   S    ++V G
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 602


>gi|197098048|ref|NP_001124989.1| contactin-1 precursor [Pongo abelii]
 gi|55726605|emb|CAH90067.1| hypothetical protein [Pongo abelii]
          Length = 627

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 206/633 (32%), Positives = 309/633 (48%), Gaps = 37/633 (5%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           ME  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MEMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +  + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYWMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLE 743
            P    I    N  ++C+A  +  LD+ ++W+ NG  I     N     N  +D  G L 
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELL 569

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           I NA    AG Y C  ++ V   S    ++V G
Sbjct: 570 IRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 602



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 80/364 (21%), Positives = 136/364 (37%), Gaps = 44/364 (12%)

Query: 430 SYNWTRRGSP----LPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485
           SY W     P    + +  +    N  L I NV+  D+G Y C  S+  S  +S  +  I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP-SITKSVFSKFI 227

Query: 486 QAEP-----------NFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
              P           +  +   D +     ++T  C A G P     W +  E       
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLE------- 280

Query: 535 PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
           P+           VL I  +  E D  +Y+C A+N        A++ V    P + +   
Sbjct: 281 PMPSTAEISTSGAVLKIFNIQLE-DEGIYECEAENIRGKDKHQARIYVQAF-PEWVEHIN 338

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 654
           ++E     G ++   C     P P   W K+G           +  G L +  V+ +++G
Sbjct: 339 DTEV--DIGSDLYWPCVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAG 387

Query: 655 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
           +Y C A N +G   +   L +L     +E  P K  I A +  ++      +      + 
Sbjct: 388 MYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS 447

Query: 715 WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           W+     + N       +  I I + G LEI N +  D G Y C  ++  GK ++  T++
Sbjct: 448 WSKGTEWLVN-------SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLV 500

Query: 774 VEGP 777
           +  P
Sbjct: 501 ITDP 504


>gi|149036840|gb|EDL91458.1| rCG56294, isoform CRA_a [Rattus norvegicus]
          Length = 644

 Score =  318 bits (816), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 196/595 (32%), Positives = 292/595 (49%), Gaps = 28/595 (4%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP F+K+P++ +F +        ITL+C A G P+P Y W        +L  + ID   
Sbjct: 24  QGPVFVKEPSNSIFPVGSED--KKITLNCEARGNPSPHYRW--------QLNGSDIDTSL 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG 307
           D R+ L+GGNLI+ +P +  D GSY C A+N  G+I+S   +L F ++  F  +    + 
Sbjct: 74  DHRYKLNGGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVS 133

Query: 308 -NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIELQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G PVP  NW R  G P P       FN +L IPN + ED G Y C A N R    +   
Sbjct: 252 LGNPVPQINWRRSDGMPFPTKIKLRKFNGVLEIPNFQQEDTGSYECIAENSRGKNVARGR 311

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           ++  A+P +   L D     +  L W C A G P  +Y W +NG+ L  E       +R 
Sbjct: 312 LTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKPSYRWLKNGDALVLE-------ERI 364

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            I++  LTI  LN   D  M+QC A+N+    YSSA+L+VL   P F + P++       
Sbjct: 365 QIENGALTIANLNVS-DSGMFQCIAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQVQV 423

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
           G  V + C P A+P+    WKK   ++    R  +  +G L I  V++ D+GIY+C A N
Sbjct: 424 GSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAEN 483

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G      +L+V   P+     P  + +A   ++ L C    + LLD+ + W  NG   
Sbjct: 484 QFGKANGTTQLVVTE-PTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLT 542

Query: 723 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
               D +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV  
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRA 596



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 25/272 (9%)

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
           C A G P    +W R      S+ +P   + +    + VL I     E D   Y+C A+N
Sbjct: 249 CFALGNPVPQINWRR------SDGMPFPTKIKLRKFNGVLEIPNFQQE-DTGSYECIAEN 301

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 629
                 +  +L     KP + +   + ET   +  ++   C     PKP + W K+G+ +
Sbjct: 302 SRGKNVARGRLTYYA-KPYWVQLLKDVETAVED--SLYWECRASGKPKPSYRWLKNGDAL 358

Query: 630 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK- 688
               R +I ENG L I+ ++  DSG++ C A N HG+  S   L VL     + + P K 
Sbjct: 359 VLEERIQI-ENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASAPDFSRNPMKK 417

Query: 689 ---ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 745
              + + +   L  + SA    L      W     + G+  + E    ++  DGGL +I 
Sbjct: 418 MIQVQVGSLVILDCKPSASPRAL----SFW-----KKGDTVVREQARISLLNDGGL-KIM 467

Query: 746 NASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           N + ADAG Y C+ ++  GK +  T ++V  P
Sbjct: 468 NVTKADAGIYTCIAENQFGKANGTTQLVVTEP 499


>gi|350591368|ref|XP_001927514.4| PREDICTED: contactin-4 [Sus scrofa]
          Length = 807

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 199/579 (34%), Positives = 289/579 (49%), Gaps = 19/579 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIP 456
           K    FP+T P A   G  V+LEC A G PVP+  W R  G P+ R A     N IL IP
Sbjct: 7   KIEVQFPETVPTA--KGTTVKLECFALGNPVPTIIWRRADGKPMARKARRHKSNGILEIP 64

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           N + ED G Y C A N R    +   ++  A+PN+   + D H+  + ++ W C+A G P
Sbjct: 65  NFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAIEENIFWECKANGRP 124

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             TY W +NG+       PL  +DR  I+   L I  +N   D  MYQC A+N+    +S
Sbjct: 125 KPTYRWLKNGD-------PLLSRDRIHIEQGTLNITIVNLS-DAGMYQCVAENKHGVIFS 176

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           SA+L V+ + P F +  ++  T    GG V I C P+A+PKP + WKK  +++    R  
Sbjct: 177 SAELSVIAVGPDFSRTLVKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDVLRENERIT 236

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           I E+G+L I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    +
Sbjct: 237 ISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGES 295

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 755
           + L C    +  L + + W+ NG  I  + D +  E        G L I N     AG+Y
Sbjct: 296 IVLPCQVTHDHSLAIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKY 355

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C+V+++V K+S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I A
Sbjct: 356 VCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQA 415

Query: 816 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           RT ++  W  V  + + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS
Sbjct: 416 RTPFSVGWQAV--NTVPEIID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPS 470

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +  T    P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +  
Sbjct: 471 EKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWML 530

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
             L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 531 TVLAS-ADASRYVFRNESVRPFSPFEVKVGVYNNKGEGP 568



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 149/649 (22%), Positives = 234/649 (36%), Gaps = 58/649 (8%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG Y C  ++     G+N     L  +   N+ Q    N+      E
Sbjct: 58  NGILEIPNFQQEDAGLYECVAEN---SRGKNVARGQLTFYAQPNWIQKI--NDIHVAIEE 112

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
                  +  EC A G P P+Y W + G PL            L I  V + D G Y C 
Sbjct: 113 ------NIFWECKANGRPKPTYRWLKNGDPLLSRDRIHIEQGTLNITIVNLSDAGMYQCV 166

Query: 470 ASNDRSALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           A N    + SS  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  
Sbjct: 167 AENKHGVIFSSAELSVIAVGPDFSRTLVKRVTLVKVGGEVVIECKPKASPKPVYTWKKGR 226

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++L        + +R  I ++  ++R +N  + D   Y C A N   T  S+  L V+  
Sbjct: 227 DVL-------RENERITISED-GSLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKD 277

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----- 640
                  P   +   GE   +      + +    F W  +G++I        FE      
Sbjct: 278 PTRVMVPPSSMDVTVGESIVLPCQVTHDHSLAIVFTWSFNGHLIDFDKDGDHFERVGGQD 337

Query: 641 --GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
             G+L+I  +    +G Y C          +   LIV   P   E +           L 
Sbjct: 338 SAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLS 397

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            R        + +  I       +G   +N +  P I IDG     T        EYE  
Sbjct: 398 WRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEI-IDGKTFTATVVGLNPWVEYEFR 454

Query: 757 CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI 808
            V  + +G     + S K       P   P  V      K+   I W    +   NGR  
Sbjct: 455 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 514

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
             Y +  R      W      +   +  RY  R E+     + P+S +E KV   N  G 
Sbjct: 515 -GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVYNNKGE 566

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRK 927
           G P SP+    +  ++P + P+ I        D+ + W   P EK       Y++ +WR 
Sbjct: 567 G-PFSPTTVVYSAEEEPSKPPASIFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRH 624

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           + D E  +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 625 E-DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 670



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 56/324 (17%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL-SDKRFTLSGGNL---IIND 262
           +I  +I   C A G P P+Y W K             DPL S  R  +  G L   I+N 
Sbjct: 109 AIEENIFWECKANGRPKPTYRWLKNG-----------DPLLSRDRIHIEQGTLNITIVN- 156

Query: 263 PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG-EFN---LKRAPEIGNQNWGKAMFCD 318
              + D G Y C A NK G I S S +L+   +G +F+   +KR   +  +  G+ +   
Sbjct: 157 ---LSDAGMYQCVAENKHGVIFS-SAELSVIAVGPDFSRTLVKRVTLV--KVGGEVVIEC 210

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTG 378
            P   P   Y W +    + + E++R+ +S DG+L    + + DAG+Y+C   +      
Sbjct: 211 KPKASPKPVYTWKKGR--DVLRENERITISEDGSLRIINVTKSDAGSYTCIATNHFGTAS 268

Query: 379 RNGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNW 433
             G      P +V        +  P++   T       G+ + L C V   + +   + W
Sbjct: 269 STGNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLAIVFTW 314

Query: 434 TRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSVTISI 485
           +  G  +  +   ++F R+        L I N++++  G+Y+C        L ++  + +
Sbjct: 315 SFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIV 374

Query: 486 QAEPNFTIPLT-DKHMDNQADLTW 508
           +  P     +T D+  D  A L+W
Sbjct: 375 RGPPGPPEAVTIDEITDTTAQLSW 398



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 145/387 (37%), Gaps = 52/387 (13%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDRG 270
           + L C+A G P P+  W + D            P++ K R   S G L I + +Q ED G
Sbjct: 24  VKLECFALGNPVPTIIWRRADG----------KPMARKARRHKSNGILEIPNFQQ-EDAG 72

Query: 271 SYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            Y C A N  G  ++   QL F     +I + N        N  W     C      P  
Sbjct: 73  LYECVAENSRGKNVARG-QLTFYAQPNWIQKINDIHVAIEENIFWE----CK-ANGRPKP 126

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            Y W ++  P    +  R+ +   G L  + +   DAG Y C  ++K             
Sbjct: 127 TYRWLKNGDPLLSRD--RIHIE-QGTLNITIVNLSDAGMYQCVAENKHG----------- 172

Query: 387 KVFPHSNFQQLKFPNNFPKTFPE---APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
            +F  +    +    +F +T  +     K G +V +EC     P P Y W +    L  N
Sbjct: 173 VIFSSAELSVIAVGPDFSRTLVKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDVLREN 232

Query: 444 AYFE-NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
                + +  L I NV   D G Y C A+N      S+  + ++      +P +   +  
Sbjct: 233 ERITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTV 292

Query: 503 QADLTWTCEAFGVPD--VTYSWFRNGELLNSETLPLEDQD---RYFIQDNV--LTIRYLN 555
              +   C+        + ++W  NG L++ +    +D D   R   QD+   L IR + 
Sbjct: 293 GESIVLPCQVTHDHSLAIVFTWSFNGHLIDFD----KDGDHFERVGGQDSAGDLMIRNIQ 348

Query: 556 PERDPAMYQCRAKNQLKTRYSSAQLRV 582
             +    Y C  +  +    ++A L V
Sbjct: 349 -LKHAGKYVCMVQTSVDKLSAAADLIV 374


>gi|426224677|ref|XP_004006495.1| PREDICTED: contactin-1 isoform 4 [Ovis aries]
 gi|426224679|ref|XP_004006496.1| PREDICTED: contactin-1 isoform 5 [Ovis aries]
          Length = 627

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 200/607 (32%), Positives = 300/607 (49%), Gaps = 36/607 (5%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
           +YG  +   DK   GP F +QP + ++   + S    ++L+C A   P P Y+W      
Sbjct: 27  RYGHGVSEEDK-GFGPIFEEQPINTIY--PEESPEGKVSLNCRARASPFPVYKW------ 77

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
             R+    ID  SD R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L+FG+
Sbjct: 78  --RMNNGDIDLTSD-RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGY 134

Query: 295 IGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSY-DG 351
           +  F  +  PE+   +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G
Sbjct: 135 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 194

Query: 352 ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA- 410
            LY + +E  D GNYSC V S          F PL   P    +   +P +    F +  
Sbjct: 195 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTK--PYPADIVVQFKDVY 252

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
              G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A
Sbjct: 253 ALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEA 312

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
            N+R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +
Sbjct: 313 ENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYH 372

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
              L L D            + + N      MYQC A+N     Y++A+L++L L P+F+
Sbjct: 373 RGELRLYD------------VTFENA----GMYQCIAENTHGAIYANAELKILALAPTFE 416

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
             P++ +  A +GG V I C P+AAPKPKF+W K    + +  R  I+E+G+L I+ ++R
Sbjct: 417 MNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILIWEDGSLEINNITR 476

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D G+Y+C   N  G   S G L++   P+     P    I    N  ++C+A  +  LD
Sbjct: 477 SDGGVYTCFVENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALD 535

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTK 769
           + ++W+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S  
Sbjct: 536 LTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSAS 595

Query: 770 TTVIVEG 776
             ++V G
Sbjct: 596 ADLVVRG 602


>gi|51476685|emb|CAH18318.1| hypothetical protein [Homo sapiens]
          Length = 865

 Score =  316 bits (809), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 237/688 (34%), Positives = 328/688 (47%), Gaps = 38/688 (5%)

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALE 359
           +R P   ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +   
Sbjct: 30  ERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTN 89

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA------ 413
             D GNYSC   S +        F    VF  S F QL       + F  + KA      
Sbjct: 90  ASDLGNYSCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAET 140

Query: 414 ----GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
               G +V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C 
Sbjct: 141 YALVGQQVTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECE 198

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           A N +        I +QA+P +   ++D   D  ++L W C A G P  T  W RNGELL
Sbjct: 199 AENPKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGELL 258

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
            S       Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V  L P F
Sbjct: 259 AS-------QNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAVQALAPDF 310

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
           +  P+     A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I  +S
Sbjct: 311 RLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNIS 370

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           R D G Y+C A N  G   S G ++ +   +     P    I    NL L+C A  +  +
Sbjct: 371 RSDEGKYTCFAENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCRASHDPTM 429

Query: 710 DVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           D+ + WT +   I  +         N+    G L I NA     G+Y C+ ++ V   S 
Sbjct: 430 DLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASK 489

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
           + TV+V GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  V  
Sbjct: 490 EATVLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRT 549

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
           +    E     G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P  A
Sbjct: 550 NPANIE-----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVA 604

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           PS + GGGG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +    V
Sbjct: 605 PSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFV 663

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPES 976
               S   YT +EVK+++ N  G GPES
Sbjct: 664 YSNESVRPYTPFEVKIRSYNRRGDGPES 691



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 140/370 (37%), Gaps = 50/370 (13%)

Query: 133 YSFSQSLKRWGFERVTG-MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENP---DKIPR 188
           ++F   + R  + +V G + P     E ++Q       D+ TY+   + ENP   D +  
Sbjct: 153 FAFGNPVPRIKWRKVDGSLSPQWTTAEPTLQIPSVSFEDEGTYE--CEAENPKGRDTVQG 210

Query: 189 GPYFIKQPTDV-VFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
                 QP  + V   ++  I +++   C A G P P+  W +       L+A      S
Sbjct: 211 RIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLR----NGELLA------S 260

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE-I 306
             R  +  G+L  +    +ED G Y C A NK G+I + +         +F L      I
Sbjct: 261 QNRVEVLAGDLRFSK-LSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLI 319

Query: 307 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNY 366
                G+ +    P   P     W++      +    RV V+ DG L    + + D G Y
Sbjct: 320 PAARGGEILIPCQPRAAPKAVVLWSKGT--EILVNSSRVTVTPDGTLIIRNISRSDEGKY 377

Query: 367 SC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
           +C   N   K + TG        K+    +   +                GD + L+C A
Sbjct: 378 TCFAENFMGKANSTGILSVRDATKITLAPSSADINL--------------GDNLTLQCRA 423

Query: 424 FGYPVP--SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASN- 472
              P    ++ WT    P+  +    ++ R         LTI N ++   G+Y C A   
Sbjct: 424 SHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTV 483

Query: 473 -DRSALESSV 481
            D ++ E++V
Sbjct: 484 VDSASKEATV 493



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 145/377 (38%), Gaps = 39/377 (10%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           +TL C+A G P P  +W K            +D     ++T +   L I      ED G+
Sbjct: 148 VTLECFAFGNPVPRIKWRK------------VDGSLSPQWTTAEPTLQIPS-VSFEDEGT 194

Query: 272 YHCKASNKFGSIISES---VQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNY 328
           Y C+A N  G    +    VQ    ++   +   A    N  WG A    P    P V  
Sbjct: 195 YECEAENPKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKP---RPTVR- 250

Query: 329 YWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
            W R+     +    RV V   G L FS L   D+G Y C  ++K      +       +
Sbjct: 251 -WLRNG--ELLASQNRVEV-LAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL 306

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN 448
            P      ++      +  P A   G ++ + C     P     W+ +G+ +  N+    
Sbjct: 307 APDFRLNPVR------RLIPAA--RGGEILIPCQPRAAPKAVVLWS-KGTEILVNSSRVT 357

Query: 449 F--NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
              +  L I N+   D+G+Y C A N      S+  +S++     T+  +   ++   +L
Sbjct: 358 VTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNL 417

Query: 507 TWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMY 563
           T  C A   P  D+T++W  +   ++ +  P     R  +++ +  +  LN + R    Y
Sbjct: 418 TLQCRASHDPTMDLTFTWTLDDFPIDFDK-PGGHYRRTNVKETIGDLTILNAQLRHGGKY 476

Query: 564 QCRAKNQLKTRYSSAQL 580
            C A+  + +    A +
Sbjct: 477 TCMAQTVVDSASKEATV 493



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 671 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 728

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 729 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 786

Query: 972 PGPES 976
            GP S
Sbjct: 787 TGPAS 791


>gi|74188643|dbj|BAE28065.1| unnamed protein product [Mus musculus]
          Length = 887

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 236/673 (35%), Positives = 325/673 (48%), Gaps = 40/673 (5%)

Query: 317 CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVS 375
           C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNYSC   S + 
Sbjct: 4   CNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHLD 63

Query: 376 DTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDKVRLECVAFG 425
                  F    VF  S F QL      P+ F  + KA          G +V LEC AFG
Sbjct: 64  -------FSTKSVF--SKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFG 114

Query: 426 YPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            PVP   W +  GS  P+    E     L IP+V  ED+G Y C A N +        I 
Sbjct: 115 NPVPRIKWRKVDGSLSPQWGTAEP---TLQIPSVSFEDEGTYECEAENSKGRDTVQGRII 171

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +QA+P +   ++D   D  ++L W C A G P     W RNGE       PL  Q+R  +
Sbjct: 172 VQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPMVRWLRNGE-------PLASQNRVEV 224

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               L    LN E D  MYQC A+N+  T Y+SA+L V  L P F++ P+     A  GG
Sbjct: 225 LAGDLRFSKLNLE-DSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGG 283

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            ++I C P AAPK   +W K   I+G+  R  +  +G L+I  +SR D G Y+C A N  
Sbjct: 284 EISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGKYTCFAENFM 343

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G   S G L V    +     P    I    NL L+C A  +  +D+ + WT +   +  
Sbjct: 344 GKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDF 402

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           +         ++    G L I NA     G Y C+ ++ V   S + TV+V GPPG PGG
Sbjct: 403 DKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPPGPPGG 462

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V V ++  T+  + W+ G  N  PI  Y + ART  +  W  V  + +  E     G  E
Sbjct: 463 VVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAE 517

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            +    L+PW  YEF+V A N LG GEPS PS +  T    P  APS + GGGG  G+L+
Sbjct: 518 TAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELT 577

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W P+ RE QN     Y + +R++  + +Q+  +    +    V    S   YT +EVK
Sbjct: 578 INWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYTPFEVK 636

Query: 964 VQAINDVGPGPES 976
           +++ N  G GPES
Sbjct: 637 IRSYNRRGDGPES 649



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 182/802 (22%), Positives = 298/802 (37%), Gaps = 108/802 (13%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY W   ++       N I P   + F + + GNL I       D G+Y C A+  
Sbjct: 10  YPGLSYRWLLNEF------PNFI-PTDGRHFVSQTTGNLYIAR-TNASDLGNYSCLAT-- 59

Query: 280 FGSIISESVQLAFGFIGEFNLKR------APEIGNQNWGKAMFCDPPTNYPGVNYYWARD 333
             S +  S +  F    + NL        AP I      KA F  PP  Y  V      +
Sbjct: 60  --SHLDFSTKSVFSKFAQLNLAAEDPRLFAPSI------KARF--PPETYALVGQQVTLE 109

Query: 334 YFPNFVEEDKRVFVSYDGAL-----------YFSALEQIDAGNYSCNVQ-SKVSDTGRNG 381
            F       +  +   DG+L              ++   D G Y C  + SK  DT +  
Sbjct: 110 CFAFGNPVPRIKWRKVDGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQG- 168

Query: 382 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
                ++   +  + LK  ++           G  +R  C A G P P   W R G PL 
Sbjct: 169 -----RIIVQAQPEWLKVISDTEADI------GSNLRWGCAAAGKPRPMVRWLRNGEPLA 217

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKHM 500
                E     L    + +ED G Y C A N    + +S  +++QA  P+F      + +
Sbjct: 218 SQNRVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLI 277

Query: 501 --DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPE 557
                 +++  C+    P  T  W +  E+L + T       R  +  D  L IR ++  
Sbjct: 278 PAARGGEISIPCQPRAAPKATILWSKGTEILGNST-------RVTVTLDGTLIIRNIS-R 329

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 617
            D   Y C A+N +    S+    +L+++ + K     S      G N+T+ C+    P 
Sbjct: 330 SDEGKYTCFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPT 386

Query: 618 P--KFVWKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDE 668
               F W  D   +     G   RR   +   G+L I        G Y+C A  V  +D 
Sbjct: 387 MDLTFTWTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTV--VDG 444

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
           +     VL            +       +QL  S   +    +A  +T       +    
Sbjct: 445 ASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWK 503

Query: 729 ELETPNINIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGP 777
           ++ T  +NI+G              +YE  V ++             +I TK  V    P
Sbjct: 504 QVRTNPVNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAV----P 559

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
              P G+          TI WT  +    NG     Y +  R   +S+W   +  V G +
Sbjct: 560 SVAPSGLSGGGGAPGELTINWTPMSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGAD 616

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
              +    ++     + P++ +E K+ + N  G G P S +    +  ++P  AP+++  
Sbjct: 617 TQYFVYSNDS-----IHPYTPFEVKIRSYNRRGDG-PESLTAIVYSAEEEPKVAPAKVWA 670

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
            G    ++++SWEP+  +  N   + Y+I + K  D E  ++ ++  G    A  R+   
Sbjct: 671 KGSSSSEMNVSWEPV-LQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSA--RVTGL 727

Query: 955 FYYTEYEVKVQAINDVGPGPES 976
           +  T+Y V V+A N  G GP S
Sbjct: 728 YPNTKYHVTVRAYNRAGTGPAS 749



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 142/365 (38%), Gaps = 37/365 (10%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           +TL C+A G P P  +W K D        +L         TL   ++        ED G+
Sbjct: 106 VTLECFAFGNPVPRIKWRKVD-------GSLSPQWGTAEPTLQIPSV------SFEDEGT 152

Query: 272 YHCKASNKFGSIISES---VQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNY 328
           Y C+A N  G    +    VQ    ++   +   A    N  WG A    P    P V  
Sbjct: 153 YECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKP---RPMVR- 208

Query: 329 YWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
            W R+  P  +    RV V   G L FS L   D+G Y C  ++K      +       +
Sbjct: 209 -WLRNGEP--LASQNRVEV-LAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQAL 264

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE- 447
            P  +F+Q    N   +  P A   G ++ + C     P  +  W++    L  +     
Sbjct: 265 AP--DFRQ----NPVRRLIPAA--RGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTV 316

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
             +  L I N+   D+G+Y C A N      S+  +S++     T+  +   ++   +LT
Sbjct: 317 TLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGDNLT 376

Query: 508 WTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQ 564
             C A   P  D+T++W  +   ++ +  P     R  +++ +  +  LN + R    Y 
Sbjct: 377 LQCHASHDPTMDLTFTWTLDDFPVDFDK-PGGHYRRASVKETIGDLTILNAQLRHGGTYT 435

Query: 565 CRAKN 569
           C A+ 
Sbjct: 436 CMAQT 440



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 149/393 (37%), Gaps = 56/393 (14%)

Query: 114 LDAAFLPEPADNV--QRDYLAYSFSQSLKRWGFERVTG-MEPLLFICEASIQKLHYLLND 170
           + A F PE    V  Q     ++F   + R  + +V G + P     E ++Q       D
Sbjct: 90  IKARFPPETYALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWGTAEPTLQIPSVSFED 149

Query: 171 DRTYQYGMDIENPDKIPRGPYFIK-QP--TDVVFDLSKRSILNDITLSCYAGGYPNPSYE 227
           + TY+   +        +G   ++ QP    V+ D ++  I +++   C A G P P   
Sbjct: 150 EGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISD-TEADIGSNLRWGCAAAGKPRPMVR 208

Query: 228 WFKEDYVQDRLVANLIDPL-SDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE 286
           W +             +PL S  R  +  G+L  +    +ED G Y C A NK G+I + 
Sbjct: 209 WLRNG-----------EPLASQNRVEVLAGDLRFSK-LNLEDSGMYQCVAENKHGTIYA- 255

Query: 287 SVQLAFGFIGEFNLKRAPE---IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343
           S +LA   +   + ++ P    I     G+      P   P     W++      +    
Sbjct: 256 SAELAVQALAP-DFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGT--EILGNST 312

Query: 344 RVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP 400
           RV V+ DG L    + + D G Y+C   N   K + TG         +    +  ++   
Sbjct: 313 RVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTG---------ILSVRDATKITLA 363

Query: 401 NNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRRGSPLP--------RNAYFENFN 450
            +           GD + L+C A   P    ++ WT    P+         R A  +   
Sbjct: 364 PSSADI-----NVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETI 418

Query: 451 RILTIPNVKVEDQGEYICRASN--DRSALESSV 481
             LTI N ++   G Y C A    D ++ E++V
Sbjct: 419 GDLTILNAQLRHGGTYTCMAQTVVDGASKEATV 451


>gi|350644557|emb|CCD60720.1| septate junction protein [Schistosoma mansoni]
          Length = 1161

 Score =  308 bits (790), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 257/924 (27%), Positives = 421/924 (45%), Gaps = 100/924 (10%)

Query: 119 LPEPADNVQ----RDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTY 174
           +P+PA+       R  L Y   ++  RWG+   T       IC A +   + LL   ++ 
Sbjct: 33  IPKPAERPTFPKVRTRLVYGTDRN--RWGWYLDTPTAHRGHICRAPVANANQLLPLSKSL 90

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV 234
            YG D   P+++ RGP FI  P DV++ +   S      L C A G P P+Y+W+   YV
Sbjct: 91  AYGSDF--PNRMARGPCFIAHPKDVLY-VHHMSTEKYAELRCEANGNPQPTYKWY---YV 144

Query: 235 QDRLVAN------------LIDPLSDK--RFTLSGGNLIINDPRQVEDRGSYHCKASNKF 280
              +  N            LID  ++   R ++S G+L+I++P    D   + C+A N +
Sbjct: 145 STEMRTNSTGDTITILHRTLIDAAAEPSGRISISAGSLVIHNPDTSTDSQMFQCEAKNIY 204

Query: 281 GSIISESVQLAFGFIGEFNLKRAPE------IGNQNWGKAMFCDPPTNYPGVNYYWAR-- 332
           GSI+S + ++ FG      L+ AP+      I   +  + + C+PP + P  +  +    
Sbjct: 205 GSILSRTARIIFG-----QLETAPKQPRNERIVMSHQSETLPCEPPAHSPPDSLLYTVYM 259

Query: 333 ----DYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQ-----SKVSDTGRNGP 382
               +  P   E  + +F+S   G + FS +  +D+G Y C +       ++ D+ +  P
Sbjct: 260 NKNGELEPVLPEYRRNLFISQAKGLIGFSEVTVVDSGVYVCMITMQFDGHRMYDSPKL-P 318

Query: 383 FFPLKV-FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP---SYNWTRR-G 437
             P  V + +   Q  +  ++FP  +P  P+ G  VRLEC A GY       Y+W R  G
Sbjct: 319 DMPFTVRYSNEPRQDPRIYDDFPAVWPTNPQRGQLVRLECFAAGYSQLDGLKYSWRRLDG 378

Query: 438 SPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND--RSALESSVTISIQAEPNFTIPL 495
           +PL R    ++++R++ +PNV+ EDQGEY C   +   + A   ++ + I A+P FT PL
Sbjct: 379 APL-RTDSLKDYDRVIELPNVQPEDQGEYECNVEDSLGKMARPKTLNLKITAKPYFTTPL 437

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS--ETLPLEDQDRYFIQDNVLTIRY 553
            +  +D  +D+  TCEA G+P+ T+ W+RN   ++    T  L       I+D  L+  +
Sbjct: 438 QNTVVDINSDVFLTCEASGIPNPTHEWYRNDITVSQLIATGKLNPTQYTIIRDGSLSHSF 497

Query: 554 LNP--ERDPAMYQCRAK-NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC 610
           L      +  +  C    N L +  SSA++RVL L P+F+K P+        G    + C
Sbjct: 498 LFCYFRLNFQILVCLLVWNSLGSEASSAEVRVLELAPTFRKHPVMPNE-GMVGSTAVMEC 556

Query: 611 NPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR------DDSGIYSCTATNVH 664
            PE AP     W  DG ++ +        NG++ + P  R       D  +  C   N  
Sbjct: 557 QPEGAPAMTVEWLHDGTVLTTSDTLMNVSNGDVDLLPGERLVDLEYADDIVLLC--DNAQ 614

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
            M  +  +L  +    Y     P            +C    ++  D   + T +  R   
Sbjct: 615 AMQSALNQL-AISVRRYGMCFAPS-----------KCKVLLQDWQDSHPVLTLDDAR--R 660

Query: 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
            +L +L  P  N   G L+I N  F ++G Y C  ++ +   S+   + + GPPG  GGV
Sbjct: 661 YELAQLYRPYGNY-FGTLKIVNVQFENSGNYTCAAETPLNSQSSSGVIRIAGPPGPCGGV 719

Query: 785 QVVEVH--KTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHV--IGKEVDRY 838
            VV+ H       + W  G ++   I +++I A   ++  + W  ++ +V     ++ + 
Sbjct: 720 -VVDPHVGVDRVNVSWAVGTSHLFQILYFQIEANAMYDPPNQWMIMASNVSISSTKLLKP 778

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
           + R+   + N L     Y  +V AGN LG GEPS PS  + T   KP   P  + GGGGK
Sbjct: 779 SDRRMTVVRN-LAANMAYRIRVRAGNALGLGEPSPPSLSFTTLPTKPTLIPQNVTGGGGK 837

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-----SETLKEYGNVGIAVVRIPS 953
            G L   W PL R  +N PN +Y+   + K + E+      +  + + G      + +  
Sbjct: 838 HGTLVFKWIPLKRVNENGPNFHYRAHIKAKENAEYSIHDLWTAKMSDDGKFMQYTLTLGD 897

Query: 954 EFYYTEYEVKVQAINDVGPGPESE 977
             +Y  Y+V VQA+N  G GP SE
Sbjct: 898 NLFYKPYDVMVQAVNSEGAGPLSE 921


>gi|426372196|ref|XP_004053014.1| PREDICTED: contactin-1, partial [Gorilla gorilla gorilla]
          Length = 561

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 190/578 (32%), Positives = 289/578 (50%), Gaps = 36/578 (6%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQ-YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           M+  L +    I  +   L +   Y+ YG  +   DK   GP F +QP + ++   + S+
Sbjct: 1   MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDK-GFGPIFEEQPINTIY--PEESL 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
              ++L+C A   P P Y+W        R+    +D  SD R+++ GGNL+IN+P + +D
Sbjct: 58  EGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD-RYSMVGGNLVINNPDKQKD 108

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPG-V 326
            G Y+C ASN +G + S    L+FG++  F  +  PE+   +  G  + CDPP ++P  +
Sbjct: 109 AGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL 168

Query: 327 NYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F P
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
           L   P    +   +P +    F +     G  V LEC A G PVP   W +   P+P  A
Sbjct: 229 LIPIPERTTK--PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA 286

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L I N+++ED+G Y C A N R   +    I +QA P +   + D  +D  +
Sbjct: 287 EISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGS 346

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL W C A G P  T  W +NG   +   L L D            + + N      MYQ
Sbjct: 347 DLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA----GMYQ 390

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N     Y++A+L++L L P+F+  P++ +  A +GG V I C P+AAPKPKF W K
Sbjct: 391 CIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSK 450

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
               + +  R  I+E+G+L I+ ++R+D GIY+C A N  G   S G L++   P+    
Sbjct: 451 GTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-PTRIIL 509

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
            P    I    N  ++C+A  +  LD+ ++W+ NG  I
Sbjct: 510 APINADITVGENATMQCAASFDPALDLTFVWSFNGYVI 547



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 101/441 (22%), Positives = 162/441 (36%), Gaps = 63/441 (14%)

Query: 359 EQIDAGNYSC---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAG 414
           +Q DAG Y C   N    V  T     F  L  FP             P+  PE   K G
Sbjct: 105 KQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFP-------------PEERPEVRVKEG 151

Query: 415 DKVRLEC-VAFGYPVP-SYNWTRRGSP----LPRNAYFENFNRILTIPNVKVEDQGEYIC 468
             + L C   + +P   SY W     P    + +  +    N  L I NV+  D+G Y C
Sbjct: 152 KGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSC 211

Query: 469 RASNDRSALESSVTISIQAEP-----------NFTIPLTDKHMDNQADLTWTCEAFGVPD 517
             S+  S  +S  +  I   P           +  +   D +     ++T  C A G P 
Sbjct: 212 FVSSP-SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPV 270

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
               W +  E       P+           VL I  +  E D  +Y+C A+N        
Sbjct: 271 PDIRWRKVLE-------PMPSTAEISTSGAVLKIFNIQLE-DEGIYECEAENIRGKDKHQ 322

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
           A++ V    P + +   ++E     G ++   C     P P   W K+G           
Sbjct: 323 ARIYVQAF-PEWVEHINDTEV--DIGSDLYWPCVATGKPIPTIRWLKNG---------YA 370

Query: 638 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
           +  G L +  V+ +++G+Y C A N +G   +   L +L     +E  P K  I A +  
Sbjct: 371 YHKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGG 430

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYE 756
           ++      +      + W+     + N       +  I I + G LEI N +  D G Y 
Sbjct: 431 RVIIECKPKAAPKPKFSWSKGTEWLVN-------SSRILIWEDGSLEINNITRNDGGIYT 483

Query: 757 CVVKSTVGKISTKTTVIVEGP 777
           C  ++  GK ++  T+++  P
Sbjct: 484 CFAENNRGKANSTGTLVITDP 504


>gi|47224415|emb|CAG08665.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 920

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 191/606 (31%), Positives = 287/606 (47%), Gaps = 34/606 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S  + IT++C A   P  +Y+W K++   D            
Sbjct: 9   GPVFEEQPVETIY--PEESPEDRITMNCRARASPPATYKWRKDNTEIDFSAEG------- 59

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
             ++L GGNL+I+ P + +  G+Y C A+N FG+++S    + FG++  F+ + R     
Sbjct: 60  SHYSLMGGNLVISSPVKEQHVGNYSCLAANAFGAVVSREASVQFGYLDLFSSEEREAVYV 119

Query: 308 NQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGN 365
            +  G  + C PP +YP  +++ W  + FP F+  DKR FVS   G LY S ++  D+GN
Sbjct: 120 KEGQGAVLLCAPPPHYPAELSFRWILNEFPTFIPLDKRRFVSQITGNLYISKVDSSDSGN 179

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-AGDKVRLECVAF 424
           YSC   S          + PL   P S     K+P +    FP+     G  + LEC A 
Sbjct: 180 YSCIASSPSISKSVFSNYIPL--VPLSERHNRKYPADLNVKFPDTTALVGQNITLECFAL 237

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +    LP N         L + NV+ ED G Y C A N +     +  +S
Sbjct: 238 GNPVPDIMWKKVDGELPSNHEVRTAGAHLHLFNVQFEDSGTYKCEAVNSKGKDYHTARLS 297

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++A P +   +T+   D  +D T +C A G P+    W +NGELL          DR  +
Sbjct: 298 VEAFPEWVEHITNTEKDLGSDYTMSCVASGKPEPQIRWMKNGELL----------DRKEM 347

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               LT        D  MYQC A N+    Y++A+LRV    P+F+  PL+    A   G
Sbjct: 348 SFRSLTF------DDSGMYQCIAANRHGVIYANAELRVFACAPTFRHNPLK-RVLAPRNG 400

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            V I C P+ APKP F W KD  ++ +  R  I+E+G+L I  V+R D G Y+C A N  
Sbjct: 401 RVVIKCRPKGAPKPTFTWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRYTCFAENDR 460

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG- 723
           G   S G L+VL   +     P    + A  N  + C+A  +  LD+A+IW+ +G  I  
Sbjct: 461 GKANSTGSLLVLES-TKITLAPSSADVKAGENALMHCAASHDPSLDIAFIWSLDGHVIDL 519

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           + D    E        G L I NA    AG Y C  ++ +  ++    ++V  PP + G 
Sbjct: 520 HTDSQHYERGTNGSSNGALLIKNAQLKHAGRYTCTAQTPIDNVAASAHLVVRAPPDVEGN 579

Query: 784 VQVVEV 789
            +   V
Sbjct: 580 AEKATV 585



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 149/602 (24%), Positives = 248/602 (41%), Gaps = 105/602 (17%)

Query: 439 PLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDK 498
           PL +  +       L I  V   D G Y C AS+       S++ S+ +     +PL+++
Sbjct: 153 PLDKRRFVSQITGNLYISKVDSSDSGNYSCIASS------PSISKSVFSNYIPLVPLSER 206

Query: 499 HM------------DNQA----DLTWTCEAFG--VPDVTYSWFRNGELLNSETLPLEDQD 540
           H             D  A    ++T  C A G  VPD+ +    +GEL ++  +      
Sbjct: 207 HNRKYPADLNVKFPDTTALVGQNITLECFALGNPVPDIMWKKV-DGELPSNHEVRTAGAH 265

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
            +     +  +++     D   Y+C A N     Y +A+L V    P + +    +E   
Sbjct: 266 LH-----LFNVQF----EDSGTYKCEAVNSKGKDYHTARLSVEAF-PEWVEHITNTEK-- 313

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
             G + T+ C     P+P+  W K+G         ++ +   +    ++ DDSG+Y C A
Sbjct: 314 DLGSDYTMSCVASGKPEPQIRWMKNG---------ELLDRKEMSFRSLTFDDSGMYQCIA 364

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
            N HG+  +   L V      +   P K  +A  RN ++      +      + W+ +  
Sbjct: 365 ANRHGVIYANAELRVFACAPTFRHNPLKRVLAP-RNGRVVIKCRPKGAPKPTFTWSKDTE 423

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP-- 777
            + N       T     + G LEI N + AD G Y C  ++  GK  ST + +++E    
Sbjct: 424 LLSN------STRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVLESTKI 477

Query: 778 ------------------------PGLPGGV------QVVEVHKTSATIQ-WTDGATNG- 805
                                   P L           V+++H  S   +  T+G++NG 
Sbjct: 478 TLAPSSADVKAGENALMHCAASHDPSLDIAFIWSLDGHVIDLHTDSQHYERGTNGSSNGA 537

Query: 806 --------RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
                   +    Y   A+T  ++     S H++ +      G  E +    L PW+ YE
Sbjct: 538 LLIKNAQLKHAGRYTCTAQTPIDNV--AASAHLVVRAPPDVEGNAEKATVVDLFPWTEYE 595

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F+VIA N LG GEPSSPSP+  T    P  APS I GGGG   +L+I+W P+  +    P
Sbjct: 596 FRVIAANTLGTGEPSSPSPKEKTLDAIPVVAPSNISGGGGTSRELTITWTPVQPQHYYGP 655

Query: 918 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY---TEYEVKVQAINDVGPGP 974
           N  Y + +R  ++ E++   + +     +A   I  +  +   T+++VKV+A N  G GP
Sbjct: 656 NFGYIVAFRPYDNREWRKVMVAD----PLARSYIHKDLTFPPLTKFQVKVKAFNSKGEGP 711

Query: 975 ES 976
            S
Sbjct: 712 FS 713


>gi|161611605|gb|AAI55825.1| Zgc:55318 protein [Danio rerio]
          Length = 804

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 197/593 (33%), Positives = 282/593 (47%), Gaps = 42/593 (7%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPN 457
           K   +FP+T   A   G  VRLEC A G PVP+  W +    +P+ A       +L IPN
Sbjct: 7   KIEAHFPQTVLAA--KGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQAVLEIPN 64

Query: 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
           +++ED G Y C+A N R        + +   P +   + D  +D+   L W C A G P 
Sbjct: 65  IQLEDSGSYECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLDSGEQLRWECRATGKPR 124

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            TY W RNGE       PL  Q R  + +  LTI  L  + D  MYQC A+N+    YSS
Sbjct: 125 PTYRWLRNGE-------PLSTQSRVEMVNGELTIHRLQ-QADSGMYQCIAENKYGAIYSS 176

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
           A+L++L   P F   P+     A  G +V++ C P A+PKP+  W+K+   +    R  +
Sbjct: 177 AELKILASAPMFNNNPV--RLIATVGKDVSLECRPRASPKPRISWRKNDRRLQPSRRIML 234

Query: 638 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
             N  L I   SR D G Y C A N  G  E    L+V   P   E  P ++ +    ++
Sbjct: 235 LRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKE-PMRVELSPLRVEVTVGESV 293

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI--TNASFAD---- 751
            L C    +  LDV+++W  N     N  LN  +      DGG  E   T +S AD    
Sbjct: 294 VLSCKVTHDPSLDVSFLWLLN-----NQPLNTQQ------DGGHFEYIQTQSSTADLMIR 342

Query: 752 ------AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 805
                 AG+Y C  +++   +  +  ++V GPPG PG V V E+  ++AT+ W+ G  N 
Sbjct: 343 SILLKHAGKYGCRAQTSADSVLAEAELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNH 402

Query: 806 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
            PIT Y + AR+  +  W       +  + D  TG  E+++   L PW  YEF+V+A N 
Sbjct: 403 SPITTYNVQARSPVSLGW-----QTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNS 457

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
           +G G+PS PS    T    P  AP+ + GG G+  +L ISWEP+  E QN     Y + +
Sbjct: 458 IGTGDPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAF 517

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           R  N T    E +    +      R  +    T +EV+V   N+ G GP SEV
Sbjct: 518 R-VNGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVGVYNNKGDGPFSEV 569



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 154/647 (23%), Positives = 237/647 (36%), Gaps = 81/647 (12%)

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC 421
           D+G+Y C  ++      R G  F        + Q    P            +G+++R EC
Sbjct: 69  DSGSYECKAENT-----RGGTAF------RGHLQVYTLPQWISMINDTQLDSGEQLRWEC 117

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
            A G P P+Y W R G PL   +  E  N  LTI  ++  D G Y C A N   A+ SS 
Sbjct: 118 RATGKPRPTYRWLRNGEPLSTQSRVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSA 177

Query: 482 TISIQAE-PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
            + I A  P F             D++  C     P    SW +N   L         + 
Sbjct: 178 ELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRLQP------SRR 231

Query: 541 RYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLR-VLTLKPSFKKR--PLES 596
              +++N  T+R +N  R D   Y CRA+NQ    + SA+L  VL +K   +    PL  
Sbjct: 232 IMLLRNN--TLRIINSSRSDEGSYVCRAENQ----FGSAELTTVLLVKEPMRVELSPLRV 285

Query: 597 ETYAGEGGNVTIFCNPEAAPK--PKFVWKKDG---NIIGSGGRRKIFEN----GNLLISP 647
           E   GE  +V + C     P     F+W  +    N    GG  +  +      +L+I  
Sbjct: 286 EVTVGE--SVVLSCKVTHDPSLDVSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRS 343

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
           +    +G Y C A        ++  L+V   P      PP + I           + +  
Sbjct: 344 ILLKHAGKYGCRAQTSADSVLAEAELLVRGPPG-----PPGVVIVEEITASTATLSWSHG 398

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG-----EYECVVKST 762
           + + + I T+N      + L   +T   + D     + +A   D       E+  V  ++
Sbjct: 399 VDNHSPITTYNVQARSPVSLG-WQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNS 457

Query: 763 VG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW---TDGATNGRPITH 810
           +G          + TK  V    P  + GG       +    I W   ++   NG     
Sbjct: 458 IGTGDPSPPSRAVRTKEAVPSVAPANVRGG----NGRRHELVISWEPVSEEYQNGEGF-G 512

Query: 811 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
           Y +  R N    W    + V   +   Y  R E        P + +E +V   N  G G 
Sbjct: 513 YIVAFRVNGTRGWKE--KMVTSADSTTYKYRDE-----TFPPLTPFEVRVGVYNNKGDG- 564

Query: 871 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930
           P S      +   +P + PS +        ++ + W+P P      P  Y   FW+   D
Sbjct: 565 PFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWKP-PSPGLGRPQGYEVSFWK---D 620

Query: 931 TEFQSETLKEYGNVGIAVVRIPSEF-YYTEYEVKVQAINDVGPGPES 976
            E Q E  K+   +G     + S     T+Y V V+  N  G GP S
Sbjct: 621 VE-QEELGKKKRTLGNETNMLLSGLDGNTQYLVSVKGFNSAGQGPSS 666



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/326 (20%), Positives = 119/326 (36%), Gaps = 52/326 (15%)

Query: 207 SILNDITL--------SCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGN 257
           S++ND  L         C A G P P+Y W +             +PLS + R  +  G 
Sbjct: 100 SMINDTQLDSGEQLRWECRATGKPRPTYRWLRNG-----------EPLSTQSRVEMVNGE 148

Query: 258 LIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFC 317
           L I+  +Q  D G Y C A NK+G+I S +          FN      I       ++ C
Sbjct: 149 LTIHRLQQA-DSGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVRLIATVGKDVSLEC 207

Query: 318 DPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDT 377
            P  + P     W ++     ++  +R+ +  +  L      + D G+Y C  +++    
Sbjct: 208 RPRAS-PKPRISWRKN--DRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSA 264

Query: 378 GRNGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYN 432
                     P++V        L+               G+ V L C     P    S+ 
Sbjct: 265 ELTTVLLVKEPMRV----ELSPLRVEVTV----------GESVVLSCKVTHDPSLDVSFL 310

Query: 433 WTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           W     PL       +F  I        L I ++ ++  G+Y CRA     ++ +   + 
Sbjct: 311 WLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSADSVLAEAELL 370

Query: 485 IQAEPN-FTIPLTDKHMDNQADLTWT 509
           ++  P    + + ++   + A L+W+
Sbjct: 371 VRGPPGPPGVVIVEEITASTATLSWS 396


>gi|351705488|gb|EHB08407.1| Contactin-1 [Heterocephalus glaber]
          Length = 1140

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 193/566 (34%), Positives = 285/566 (50%), Gaps = 24/566 (4%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G  V LEC A G PVP   W +   P+P  A       +L I N+++ED+G Y C A N 
Sbjct: 337 GQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENI 396

Query: 474 RSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSET 533
           R   +    I +QA P +   + D  +D  +DL W C A G P  T  W +NG   +   
Sbjct: 397 RGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGE 456

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L L D            + + N      MYQC A+N     Y++A+L++L L P+F+  P
Sbjct: 457 LRLYD------------VTFENA----GMYQCIAENTYGAIYANAELKILALAPTFELNP 500

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDS 653
           ++ +  A +GG V I C P+AAPKPKF W K    + +  R  I+E+G+L I+ ++R+D 
Sbjct: 501 MKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDG 560

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C A N  G   S G L++   P+     P    I    N  ++C+A  +  LD+ +
Sbjct: 561 GIYTCFAENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTF 619

Query: 714 IWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
           IW+ NG  I     N     N  +D  G L I NA    AG Y C  ++ V   S    +
Sbjct: 620 IWSFNGYVIDFTKENIHYQRNFMLDANGELLIRNAQLRHAGRYTCTAQTIVDNSSASADL 679

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
           +V GPPG PGG+++ ++  TS  + W+ G+ N  PI+ Y I  +T  +  W +       
Sbjct: 680 VVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK----- 734

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
            +     G  EA+    L+PW  YEF+V+A N LG GEPS PS +  T    P  APS +
Sbjct: 735 TDPPIIEGNMEAARAVDLIPWMEYEFRVLATNTLGMGEPSIPSNRIKTDGAAPNVAPSDV 794

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
           GGGGG   +L+I+W PL RE     N  Y + ++  +  E++  T+    + G  V +  
Sbjct: 795 GGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGDEWKKVTVTN-PDTGRYVHKDE 853

Query: 953 SEFYYTEYEVKVQAINDVGPGPESEV 978
           +    T ++VKV+A N+ G GP S +
Sbjct: 854 TMSPSTAFQVKVKAFNNKGDGPYSLI 879



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 262/599 (43%), Gaps = 50/599 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP + ++   + S+   ++L+C A   P P Y+W        R+    +D  SD
Sbjct: 27  GPIFEEQPINTIY--PEESLEGKVSLNCRARASPFPVYKW--------RMNNGDVDLTSD 76

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++ GGNL+IN+P + +D G Y+C ASN +G + S    L FG++  F  +  PE+  
Sbjct: 77  -RYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLNFGYLDPFPPEERPEVRV 135

Query: 308 NQNWGKAMFCDPPTNYP-GVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
            +  G  + CDPP ++P  ++Y W  + FP F+  DKR FVS  +G LY + +E  D GN
Sbjct: 136 KEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGN 195

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA-PKAGDKVRLECVAF 424
           YSC V S          F PL   P    +   +P +    F +     G  V LEC A 
Sbjct: 196 YSCFVSSPSITKSVFSKFIPLIPIPERTTK--PYPADIVVQFKDIYALMGQNVTLECFAL 253

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP   W +   P+P  A       +L I N+++ED+G Y C A N R   +    I 
Sbjct: 254 GNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIY 313

Query: 485 IQAE-----PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
           +Q        +  +   D +     ++T  C A G P     W +  E       P+   
Sbjct: 314 VQGTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLE-------PMPST 366

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
                   VL I  +  E D  +Y+C A+N        A++ V    P + +   ++E  
Sbjct: 367 AEISTSGAVLKIFNIQLE-DEGLYECEAENIRGKDKHQARIYVQAF-PEWVEHINDTEV- 423

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
              G ++   C     P P   W K+G           +  G L +  V+ +++G+Y C 
Sbjct: 424 -DIGSDLYWPCVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCI 473

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
           A N +G   +   L +L     +E  P K  I A +  ++      +      + W+   
Sbjct: 474 AENTYGAIYANAELKILALAPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGT 533

Query: 720 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
             + N       +  I I + G LEI N +  D G Y C  ++  GK ++  T+++  P
Sbjct: 534 EWLVN-------SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 585



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 183/829 (22%), Positives = 310/829 (37%), Gaps = 126/829 (15%)

Query: 196 PTDVVFDLSKRSIL--NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL-SDKRFT 252
           P D+V        L   ++TL C+A G P P   W K           +++P+ S    +
Sbjct: 228 PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRK-----------VLEPMPSTAEIS 276

Query: 253 LSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF------NLKRAPEI 306
            SG  L I +  Q+ED G Y C+A N  G    ++     G    +        K    +
Sbjct: 277 TSGAVLKIFN-IQLEDEGLYECEAENIRGKDKHQARIYVQGTTKPYPADIVVQFKDIYAL 335

Query: 307 GNQNWGKAMFC--DPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA-LYFSALEQIDA 363
             QN     F   +P    P + +    +  P+  E      +S  GA L    ++  D 
Sbjct: 336 MGQNVTLECFALGNP---VPDIRWRKVLEPMPSTAE------ISTSGAVLKIFNIQLEDE 386

Query: 364 GNYSCNVQSKVSDTGRNGPFFPLKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRL 419
           G Y C  ++ +    ++     ++ FP    H N  ++                G  +  
Sbjct: 387 GLYECEAEN-IRGKDKHQARIYVQAFPEWVEHINDTEVDI--------------GSDLYW 431

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
            CVA G P+P+  W + G      AY +   R+    +V  E+ G Y C A N   A+ +
Sbjct: 432 PCVATGKPIPTIRWLKNGY-----AYHKGELRLY---DVTFENAGMYQCIAENTYGAIYA 483

Query: 480 SVTISIQA-EPNFTI-PLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGE-LLNSETLP 535
           +  + I A  P F + P+  K +  +   +   C+    P   +SW +  E L+NS  + 
Sbjct: 484 NAELKILALAPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRI- 542

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
                    +D  L I  +    D  +Y C A+N      S+  L V+T        P+ 
Sbjct: 543 ------LIWEDGSLEINNIT-RNDGGIYTCFAENNRGKANSTGTL-VITDPTRIILAPIN 594

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGNLLISPV 648
           ++   GE   +    + + A    F+W  +G +I        ++       NG LLI   
Sbjct: 595 ADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFTKENIHYQRNFMLDANGELLIRNA 654

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
               +G Y+CTA  +     +   L+V   P     L  +I      ++ L  S  ++  
Sbjct: 655 QLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGL--RIEDIRATSVALTWSRGSDNH 712

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
             ++  +T     I + D  + +T    I+G +            EYE  V +T      
Sbjct: 713 SPISK-YTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVLAT------ 765

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPIT----------HYK--- 812
               +  G P +P     ++    +  +  +D   G  + R +T          HY    
Sbjct: 766 --NTLGMGEPSIPS--NRIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNF 821

Query: 813 --IIARTNWNS-TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
             I+A   ++   W  V+  V   +  RY  + E      + P + ++ KV A N  G G
Sbjct: 822 GYIVAFKPFDGDEWKKVT--VTNPDTGRYVHKDE-----TMSPSTAFQVKVKAFNNKGDG 874

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            P S      +  D P +AP+ +G       ++S+ W+ +  +   +  I Y     K+ 
Sbjct: 875 -PYSLIAVIYSAQDAPNEAPTDVGVKVLSSSEISVHWKHVVEKIVESYQIRYWAAHDKEA 933

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                  T +EY        R+ +    T+Y V+V A N  G GP SEV
Sbjct: 934 AAHRVQVTSQEYS------ARLENLLPDTQYFVEVGACNSAGCGPPSEV 976


>gi|441613651|ref|XP_004088156.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2 [Nomascus leucogenys]
          Length = 1015

 Score =  298 bits (764), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 258/811 (31%), Positives = 358/811 (44%), Gaps = 94/811 (11%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 36  GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 86

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNLKRAPE 305
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FG    +G+        
Sbjct: 87  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGXXWLLGQGLQNSTSM 145

Query: 306 IGNQ-NWGKAMFCDPPTNY-------PGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFS 356
           +G+   W     C P T +        G++Y W  + FPNF+  D R FVS   G LY +
Sbjct: 146 LGSHPEWP----CXPSTPWFPQTPRILGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIA 201

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--- 413
                D GNYSC   S +        F    VF  S F QL       + F  + KA   
Sbjct: 202 RTNASDLGNYSCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFP 252

Query: 414 -------GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEY 466
                  G +V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y
Sbjct: 253 AETYALVGQQVTLECFAFGNPVPRIKWRKVDGSL--SPQWTTVEPTLQIPSVSFEDEGTY 310

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
            C A N +        I +QA+P +   ++D   D  ++L W C A G P  T  W RNG
Sbjct: 311 ECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNG 370

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E L S+           + D  L   + N                            +L 
Sbjct: 371 EPLASQ-----------VGDVGLPPTHHN----------------------------SLA 391

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 646
           P F+  P+     A  GG + I C P AAPK   +W K   I+ +  R  +  +G L+I 
Sbjct: 392 PDFRLNPVRRLIPAARGGEIIIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIR 451

Query: 647 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
            +SR D G Y+C A N  G   S G L V    +     P    I    NL L+C A  +
Sbjct: 452 NISRSDEGKYTCFAENFMGKANSTGILSVRDA-TKITLAPSSADINLGDNLTLQCHASHD 510

Query: 707 ELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 765
             +D+ + WT +   I  +         N+    G L I NA     G+Y C+ ++ V  
Sbjct: 511 PTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDS 570

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 825
            S + TV+V GPPG PGGV V ++  T+  + W+ G  N  PI  Y + ART     W  
Sbjct: 571 ASKEATVLVRGPPGPPGGVVVRDIGDTTIQLNWSRGFDNHSPIAKYTLQARTPPAGKWKQ 630

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
           V  +    E     G  E +    L PW  YEF+VIA N LG GEPS PS +  T    P
Sbjct: 631 VRTNPANIE-----GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAP 685

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
             APS + GGGG  G+L ++W P+ RE QN     Y + +R++  T +Q+  +    +  
Sbjct: 686 SVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQ 744

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
             V    S   YT +EVK+++ N  G GPES
Sbjct: 745 YFVYSNESVRPYTPFEVKIRSYNRRGDGPES 775



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 755 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 812

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 813 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHSNTKYHVTVRAYNRAG 870

Query: 972 PGPES 976
            GP S
Sbjct: 871 TGPAS 875


>gi|71297177|gb|AAH39255.1| CNTN5 protein [Homo sapiens]
          Length = 617

 Score =  298 bits (763), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 191/583 (32%), Positives = 279/583 (47%), Gaps = 20/583 (3%)

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPN 457
           K   +FP T   A   G  V++EC A G PVP+  W +    +P  A       +L IPN
Sbjct: 7   KIEVHFPFTVTAA--KGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPN 64

Query: 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
           V+++D G Y CRA N R        + +   P++   L D  +D+ + L W C+A G P 
Sbjct: 65  VQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPR 124

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            TY W +NG       +PL  Q R  + + VL I  +N + D  MYQC A+N+    Y+S
Sbjct: 125 PTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYAS 176

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
           A+L++L   P+F    L+      +   V I C P+ +PKP   WKK    +    R  I
Sbjct: 177 AELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAI 236

Query: 638 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
             +G+L I   S+ D G Y C   NV G  E    L V   P+  E  P +  +    ++
Sbjct: 237 LPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGESI 295

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYE 756
            L C A  +  LDV + WT  G  I    +    E+         L I N     AG Y 
Sbjct: 296 VLNCKAIHDASLDVTFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYG 355

Query: 757 CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
           C V++T   +S +  ++V GPPG PG V V E+ +++AT+ W+  A N  PI+ Y + AR
Sbjct: 356 CRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQAR 415

Query: 817 TNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           + ++  W  V      K V +  TG  E+++   L PW  YEF+V+A N +G G+PS+PS
Sbjct: 416 SPFSLGWQTV------KTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPS 469

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
               T    P  AP+ + G  G+  +L I+WEP+  E QN     Y + +R  N T    
Sbjct: 470 RMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWK 528

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           E +         + R  S    T +EVKV   N+ G GP S++
Sbjct: 529 EKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 571



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 126/334 (37%), Gaps = 47/334 (14%)

Query: 212 ITLSCYAGGYPNPSYEWFKED-YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           + + C+A G P P+  W K + Y+            S  R   S   L I +  Q++D G
Sbjct: 24  VKMECFALGNPVPTITWMKVNGYIP-----------SKARLRKSQAVLEIPN-VQLDDAG 71

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP-------TNY 323
            Y C+A N  G            F G+  +   P    +     +    P       T  
Sbjct: 72  IYECRAENSRGK---------NSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGK 122

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
           P   Y W ++  P  +    RV +  +G L    + Q DAG Y C  ++K      +   
Sbjct: 123 PRPTYRWLKNGVP--LSPQSRVEM-VNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAEL 179

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
             L   P     QLK      KT         +V +EC   G P P+ +W +    +  N
Sbjct: 180 KILASAPTFALNQLK------KTI--IVTKDQEVVIECKPQGSPKPTISWKKGDRAVREN 231

Query: 444 AYFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
                  +  L I N    D+G+Y+CR  N   + E   ++S++ EP   I LT K  + 
Sbjct: 232 KRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVK-EPT-RIELTPKRTEL 289

Query: 503 QA--DLTWTCEAF--GVPDVTYSWFRNGELLNSE 532
                +   C+A      DVT+ W   G+ ++ E
Sbjct: 290 TVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 323



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 131/342 (38%), Gaps = 55/342 (16%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P+++++  D   D       + +   C A G P P+Y W K              PLS +
Sbjct: 96  PHWVEKLNDTQLDSG-----SPLRWECKATGKPRPTYRWLKNGV-----------PLSPQ 139

Query: 250 -RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE--I 306
            R  +  G L+I++  Q  D G Y C A NK+G+I + +          F L +  +  I
Sbjct: 140 SRVEMVNGVLMIHNVNQ-SDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTII 198

Query: 307 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNY 366
             ++    + C  P   P     W +      V E+KR+ +  DG+L      + D G Y
Sbjct: 199 VTKDQEVVIECK-PQGSPKPTISWKKG--DRAVRENKRIAILPDGSLRILNASKSDEGKY 255

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-----AGDKVRLEC 421
            C         G N  F   ++    + ++       P      PK      G+ + L C
Sbjct: 256 VCR--------GEN-VFGSAEIIASLSVKE-------PTRIELTPKRTELTVGESIVLNC 299

Query: 422 VAF--GYPVPSYNWTRRGSPL---PRNAYFENF-----NRILTIPNVKVEDQGEYICRAS 471
            A        ++ WT +G P+       +FE+      +  L I N+ +   G Y CR  
Sbjct: 300 KAIHDASLDVTFYWTLKGQPIDFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQ 359

Query: 472 NDRSALESSVTISIQAEPN-FTIPLTDKHMDNQADLTWTCEA 512
               ++     + ++  P    I + ++  ++ A L+W+  A
Sbjct: 360 TTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPAA 401


>gi|95007729|dbj|BAE94190.1| contactin/TAG-1 cell adhesion molecule [Dugesia japonica]
          Length = 1156

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 268/899 (29%), Positives = 411/899 (45%), Gaps = 78/899 (8%)

Query: 141 RWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGM-DIENPDKIPRGPYFIKQPTDV 199
           +W F      +   FICEAS + +   +   R+  +G  D+ N   + RGP  I QPTD 
Sbjct: 2   KWMFNLTADTDLNYFICEASKRTISETVTISRSADFGQSDLTN---VYRGPCIINQPTDQ 58

Query: 200 VFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS--DKRFTLSGGN 257
           ++  +  S+ N +T +C   G P P   W+            LIDP+S  + + T +GG 
Sbjct: 59  LYAPAVTSV-NTVTFTCDVYGDPFPKVSWYFTTDTAQGPQRTLIDPMSYTNGKVTQTGGI 117

Query: 258 LIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN-----LKRAPEIGNQNWG 312
           L INDP    D     C+A N +GS+IS  VQ+  G +  +N     +KR  +    N G
Sbjct: 118 LTINDPDNTFD-NKIDCQADNDYGSVISRQVQIIRGRLDSYNRNPRQIKRIAD----NTG 172

Query: 313 KAMFCDPPTNYPG----VNYYWAR-----DYFPNFVEEDKR--VFVSYD-GALYFSALEQ 360
             + C+PP + P       +Y  R     +   + ++   R  +F+S++ G + FS    
Sbjct: 173 FMLDCEPPAHSPDDTLVYTFYITRKNDKGETVDDIIQSQLRNNIFLSHNLGLIGFSIASL 232

Query: 361 IDAGNYSCNVQSK-VSDTGRNGPFFPLKVFPHSNFQQLKFPNN-FPKTFPEAPKAGDKVR 418
            D+G Y C V  K ++ T  N P  PL+V+  +    +   N+ FP   P  P  GD + 
Sbjct: 233 KDSGLYKCRVAWKGIAGTSYNSPEIPLEVYASNTIYPVPSINDKFPNFKPSNPFLGDTIE 292

Query: 419 LECVAFGY----PVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC--RASN 472
            EC  +G     P+  Y WT  G  LP  A   +F R + + N++ ED+G Y C     +
Sbjct: 293 FECFGYGEIKQNPL-KYFWTWNGKALPSKAVISDFERRVRLENIQFEDEGVYGCTIETMD 351

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
            + +   SV ++I A+P F +   +++ D  + +T TC+A G P VT  W+RN   L+  
Sbjct: 352 GKISQPRSVKLTINAKPTFVVKPKNQYPDIGSTITLTCQAIGRPLVTVQWYRNDLPLSKW 411

Query: 533 TLPLEDQDRYFIQDNVLTIRYL---NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
            +   D    + + N+ T  +        D AM  C   N      +  +L  ++LKP+F
Sbjct: 412 LMKNPDARYNYTEGNITTALFTITGMKTTDNAMIGCNIYNTFGRESAYIELFAVSLKPNF 471

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--------------GRR 635
            K PL ++     G +V I C PE +P P   W  +G  +  G              G  
Sbjct: 472 DKYPLLNKE-GLVGMDVIIPCKPEGSPAPTITWSFNGGTLTLGPTNFDQILGKISCAGDI 530

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
            I  N NL I  V     G+Y+CTA NV G   S   L V+         P    +  + 
Sbjct: 531 CIMPNRNLFIKSVKTSHIGMYTCTAVNVLGTASSSAYLDVIPKLE-ISNFPVGRRVQVNS 589

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNELETPNINIDG------GLLEITNA 747
           N+ L C A     LD+ Y W    VR+    MDL+                 G L+I N 
Sbjct: 590 NVYLPCQAAGTPYLDIDYDWYFENVRLKFDRMDLDARRYDKSQFMRPYYRYFGTLKIFNI 649

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGATNGR 806
            F D   Y C V +          + V GPPG+ GG+ V  V  T + T++WTDG  +G 
Sbjct: 650 QFYDEANYTCRVTTPFAVEVIPALIQVLGPPGVGGGITVTPVVGTVNHTVEWTDGYDHGS 709

Query: 807 PITHYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL----VPWST-YEFKV 860
           PI  Y++ ++R N    W  + +  I K       ++   + N L    +P +T +  ++
Sbjct: 710 PILWYRLEVSRVNVQQEWIILLDK-INKTSITPINKQNNLVRNQLSFSGLPANTNFRLRL 768

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
            A N  G GEPSS S  + T A  P ++P  + GGGGK+G L I WEPL   ++N  N  
Sbjct: 769 FAANSFGLGEPSSQSEVFKTEAIPPQKSPQNVTGGGGKVGTLVIRWEPLLPLEENGDNFE 828

Query: 921 YKIFWRKKNDTEFQSET--LKEYGNVG--IAVVR-IPSEFYYTEYEVKVQAINDVGPGP 974
           Y+I +++  + ++ S T  L +  + G  + V R +P+   Y  +EVKV+A+N  G GP
Sbjct: 829 YEIQYKEAKEVDWISYTGFLNKSLDNGKYLQVTRDLPANKDYLPFEVKVRAVNIKGAGP 887


>gi|324501786|gb|ADY40792.1| Contactin [Ascaris suum]
          Length = 1233

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 279/1026 (27%), Positives = 428/1026 (41%), Gaps = 112/1026 (10%)

Query: 8   LFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN 67
             +FVSF + F Q       +CP  W    + C R     +    DA+      D +LA 
Sbjct: 16  FLLFVSFVASFDQR------KCPLEWTPVAEHCVRLYPRSV----DAQAAQSICDDNLAQ 65

Query: 68  -----VNDADEHGFI--MYQL----FWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDA 116
                V+D      I  +Y+L    F        W     + +P+  +N D  +  +   
Sbjct: 66  LLNILVDDTLYTDLIADVYELLQHYFEIGLHELAWLVAAGEWTPSSGINYDVWSKTQSVQ 125

Query: 117 AFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQY 176
           +          R Y   +FS           TG     FIC    Q    LL     YQ 
Sbjct: 126 SHFAIIQRTSSRKYKLSTFS-----------TG-STYPFICSLRPQFKRLLL-----YQQ 168

Query: 177 GMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQD 236
            +    P  +PR     +QP+   +  + RS  N ITL C A G P P  +WF+      
Sbjct: 169 AI---LPTGVPR---ITEQPSSE-YLYTDRSDNNYITLPCTAVGKPLPHIKWFRNG---- 217

Query: 237 RLVANLIDPLSDKRFTLSGGNLII----NDPRQVEDRGSYHCKASNKFGSIISESVQLAF 292
             V  +     +    L+GG+L+I     D        SYHC A N+ G + S S  +  
Sbjct: 218 --VEEIDVGTENSSLLLAGGSLMIAVGSRDGSDESAYASYHCTAENQLGVVRSVSAIVRP 275

Query: 293 GFIGEFNLKRAPEIG--NQNWGKAMFCDPPTNYP-GVNYYWARD-YFPNFVEEDKRVFVS 348
            FI  F+  R           G  + C  P +YP  ++Y W  D     FV + +R+F+S
Sbjct: 276 AFISAFHSSRMDVFAFIAPGRGARIECQAPLHYPKSLSYSWMMDGSTERFVSQTERIFIS 335

Query: 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNF----P 404
           +DG LYF+   + DA +Y+C++    + +G  GPFF LK+ P     +L F        P
Sbjct: 336 HDGTLYFAYNVKEDATSYACSLALSSTQSGNYGPFFHLKLPP--KLSELTFEPLIDEMQP 393

Query: 405 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQ 463
           + FPE P  G    LEC A+G P PSY WTR  G P+   A   N+ R+L I +++ ED 
Sbjct: 394 QIFPEYPLLGHTTYLECFAYGRPSPSYRWTRIDGRPISSKAKATNYGRVLKIDSLEPEDS 453

Query: 464 GEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWF 523
           G Y C A N+  A  + VT+ +QA P    PL D+ + + A   + C      D    WF
Sbjct: 454 GTYKCIAENEHGADTAEVTLLVQALPAILWPLQDRIVASNATTVFDCH-LAAADGNIEWF 512

Query: 524 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
           R+   ++   +  +D+ R+ I+DN L I  + PE D  +Y+C A N++ +  SSA+L V+
Sbjct: 513 RDAVPISPLLMSSDDRARFLIEDNKLIINRIRPE-DNGIYECIANNEIGSTSSSARLTVV 571

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFEN-- 640
              P F    +    +A  G  +TI C   ++P     W + +G  + S GR +   +  
Sbjct: 572 DFMPRFDGNAMPKRVFAVVGSELTIPCIYHSSPPGSATWSRYNGERLSSNGRIRAGNDRL 631

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR---NL 697
             L+I PV  DD G Y CTA NV+G  +    ++V+  P+   Q PP  +++A     N+
Sbjct: 632 NALVIHPVQSDDHGEYICTAINVYGEAQFSVYVVVIEKPNVVVQ-PPSESLSAQSGSVNI 690

Query: 698 QLRCSAHTEELLD---VAYIWTHNGVRIGNM-DLNELET------------PNINIDGGL 741
                   E L D     + WT N   I ++    ++ T            P+  +   L
Sbjct: 691 SCEVEMFCENLSDCPEALFEWTVNDRPIRSLPQYQKVHTRASESYEPNRGQPSSKVKQKL 750

Query: 742 -LEIT-NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
            LE++        G + C      G    + + I   PP  P  +QV+ V   +  + W 
Sbjct: 751 ELELSPTLGLHRLGRFACTSLFGGGASEFEPSYI---PPS-PIDLQVINVSSQTVNLSWK 806

Query: 800 DGATNGRPITH-------YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
             +T  R   H       Y I  RT  + TW  V   +I  +         A++E    P
Sbjct: 807 QPSTRHRDRKHGQIAVDAYMIDFRTKLDRTWKPVPNTLISTKDSIIVSYTVANLE----P 862

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           +  Y+F+V+A        PS  +    T    P Q              + I WEPL +E
Sbjct: 863 FLYYQFRVMARASNRISRPSRSTEWLRTLPSPPRQIIGHTSWRRLNGEYIVIEWEPLEKE 922

Query: 913 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE-FYYTEYEVKVQAINDVG 971
               PN+ Y+I W   ND   +S   +   +    +VR+ +           ++A+ND+G
Sbjct: 923 HYGGPNLRYEISW---NDGTKESPQKQAVVHESAYMVRLAAAGGGCRRVSFSIRAVNDIG 979

Query: 972 PGPESE 977
            GP S+
Sbjct: 980 KGPPSD 985


>gi|148666978|gb|EDK99394.1| contactin 4 [Mus musculus]
          Length = 639

 Score =  290 bits (741), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 184/539 (34%), Positives = 259/539 (48%), Gaps = 23/539 (4%)

Query: 346 FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPK 405
            VS +  L F+ LE     N+    +S VS     G        PHS     ++      
Sbjct: 109 IVSREAKLQFAYLE-----NFKTRTRSTVSVRRGQGMVLLCGPPPHSGGVMGEYEPKIEV 163

Query: 406 TFPEAPKA--GDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVED 462
            FPE   A  G  V+LEC A G PVP+  W R  G P+ R A     N IL IPN + ED
Sbjct: 164 QFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQED 223

Query: 463 QGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSW 522
            G Y C A N R    +   ++  A+PN+   + D H+  +  + W C+A G P  TY W
Sbjct: 224 AGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRW 283

Query: 523 FRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
            +NG+       PL  +DR  I+   L I  +N   D  MYQC A+N+    +SSA+L V
Sbjct: 284 LKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSV 335

Query: 583 LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN 642
           +   P F +  L+  T    GG V I C P+A+P+P + W+K   I+    R  I E+GN
Sbjct: 336 IAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGN 395

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  V++ D+G Y+C ATN  G   S G  +V+  P+     P  + +    ++ L C 
Sbjct: 396 LRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPSSMDVTVGESIVLPCQ 454

Query: 703 AHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
              +  LD+ + WT NG  I  + D +  E        G L I N     AG+Y C+V++
Sbjct: 455 VTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQT 514

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 821
           +V K+S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I ART ++ 
Sbjct: 515 SVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSV 574

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
            W       +    D   G+   +    L PW  YEF+ +A N +G GEPS PS +  T
Sbjct: 575 GW-----QAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 628



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 205/517 (39%), Gaps = 78/517 (15%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDY---FPNFVEEDKRVFVSYD-------------- 350
            +  G  + C PP +  GV   +       FP  V  +K   V  +              
Sbjct: 135 RRGQGMVLLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWR 194

Query: 351 -----------------GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393
                            G L     +Q DAG+Y C  ++     G+N     L  +   N
Sbjct: 195 RADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENS---RGKNVAKGQLTFYAQPN 251

Query: 394 FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRIL 453
           + Q+   N+      E+      V  EC A G P P+Y W + G PL      +     L
Sbjct: 252 WVQII--NDIHVAMEES------VFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTL 303

Query: 454 TIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDK--HMDNQADLTWTC 510
            I  V + D G Y C A N    + SS  +S+ AE P+F+  L  +   +    ++   C
Sbjct: 304 NITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIEC 363

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKN 569
           +    P   Y+W +  E+       L + +R  I ++   +R +N  + D   Y C A N
Sbjct: 364 KPKASPRPVYTWRKGREI-------LRENERITISEDG-NLRIINVTKSDAGSYTCIATN 415

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
              T  S+    V+   P+    P  S +   GE   +      + +    F W  +G++
Sbjct: 416 HFGTASSTGN--VVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHL 473

Query: 629 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSC 658
           I        FE        G+L+I  +    +G Y C
Sbjct: 474 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVC 510



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 133/330 (40%), Gaps = 62/330 (18%)

Query: 208 ILNDITLS--------CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNL 258
           I+NDI ++        C A G P P+Y W K             DPL  + R  +  G L
Sbjct: 255 IINDIHVAMEESVFWECKANGRPKPTYRWLKNG-----------DPLLTRDRIQIEQGTL 303

Query: 259 ---IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWG 312
              I+N    + D G Y C A NK G I S +         +F+   LKR   +  +  G
Sbjct: 304 NITIVN----LSDAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLV--KVGG 357

Query: 313 KAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---N 369
           + +    P   P   Y W +      + E++R+ +S DG L    + + DAG+Y+C   N
Sbjct: 358 EVVIECKPKASPRPVYTWRKGR--EILRENERITISEDGNLRIINVTKSDAGSYTCIATN 415

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPV 428
                S TG      P KV        +  P++   T       G+ + L C V   + +
Sbjct: 416 HFGTASSTGNVVVKDPTKV--------MVPPSSMDVT------VGESIVLPCQVTHDHSL 461

Query: 429 P-SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALES 479
              + WT  G  +  +   ++F R+        L I N++++  G+Y+C        L  
Sbjct: 462 DIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSV 521

Query: 480 SVTISIQAEPNFTIPLT-DKHMDNQADLTW 508
           +  + ++  P     +T D+  D  A L+W
Sbjct: 522 AADLIVRGPPGPPEAVTIDEITDTTAQLSW 551



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 104/265 (39%), Gaps = 43/265 (16%)

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 639
           V   +PS    PL+SE        V + C  +  PKP   WK +G    IG   R  + +
Sbjct: 27  VFVQEPSHVMFPLDSEEK-----KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVD 81

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
              L+ +P    D+G Y C ATN  G   S+  +L   +  ++  +    +++   + + 
Sbjct: 82  GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141

Query: 699 LRCS---------AHTEELLDVAY---IWTHNGVRIGNMDLNELETPNINI-----DG-- 739
           L C             E  ++V +   +    G  +  ++   L  P   I     DG  
Sbjct: 142 LLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGTTV-KLECFALGNPVPTILWRRADGKP 200

Query: 740 -----------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV- 787
                      G+LEI N    DAG YECV +++ GK   K  +     P     VQ++ 
Sbjct: 201 IARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIIN 257

Query: 788 EVHKTSATIQWTDGATNGRPITHYK 812
           ++H       + +   NGRP   Y+
Sbjct: 258 DIHVAMEESVFWECKANGRPKPTYR 282


>gi|149036849|gb|EDL91467.1| contactin 4, isoform CRA_b [Rattus norvegicus]
          Length = 639

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 185/539 (34%), Positives = 263/539 (48%), Gaps = 23/539 (4%)

Query: 346 FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPK 405
            VS +  L F+ LE     N+    +S VS     G        PHS     ++      
Sbjct: 109 IVSREAKLQFAYLE-----NFKTRTRSTVSVRRGQGMVLLCGPPPHSGGVMGEYEPKIEV 163

Query: 406 TFPEAPKA--GDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVED 462
            FPE   A  G  V+LEC A G PVP+  W R  G P+ R A     + IL IPN + ED
Sbjct: 164 QFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSSGILEIPNFQQED 223

Query: 463 QGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSW 522
            G Y C A N R    +   ++  A+PN+   + D H+  +  + W C+A G P  TY W
Sbjct: 224 AGSYECVAENSRGKNIAKGQVTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRW 283

Query: 523 FRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
            +NG+       PL  ++R  I+   L I  +N   D  MYQC A+N+    Y+SA+L V
Sbjct: 284 LKNGD-------PLLTRERIQIEQGTLNITIVNLS-DAGMYQCVAENKHGVIYASAELSV 335

Query: 583 LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN 642
           +   P F +  L+  T    GG V I C P+A+P+P + W+K   I+    R  I E+GN
Sbjct: 336 IAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGN 395

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  V++ D+G Y+C ATN  G   S G  +V+  P+     P  + +    ++ L C 
Sbjct: 396 LRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPSSMDVTVGESIVLPCQ 454

Query: 703 AHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
              +  LD+ + WT NG  I  + D +  E        G L I N     AG+Y C+V++
Sbjct: 455 VTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQT 514

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 821
           +V K+S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I ART ++ 
Sbjct: 515 SVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSV 574

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
            W  VS   + + VD   G+   +    L PW  YEF+ +A N +G GEPS PS +  T
Sbjct: 575 GWQAVS--TVPELVD---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 628



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 129/539 (23%), Positives = 215/539 (39%), Gaps = 81/539 (15%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVEGSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDY---FPNFVEEDKRVFVSYD-------------- 350
            +  G  + C PP +  GV   +       FP  V  +K   V  +              
Sbjct: 135 RRGQGMVLLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWR 194

Query: 351 -----------------GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393
                            G L     +Q DAG+Y C  +   +  G+N     +  +   N
Sbjct: 195 RADGKPIARKARRHKSSGILEIPNFQQEDAGSYECVAE---NSRGKNIAKGQVTFYAQPN 251

Query: 394 FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRIL 453
           + Q+   N+      E+      V  EC A G P P+Y W + G PL      +     L
Sbjct: 252 WVQII--NDIHVAMEES------VFWECKANGRPKPTYRWLKNGDPLLTRERIQIEQGTL 303

Query: 454 TIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDK--HMDNQADLTWTC 510
            I  V + D G Y C A N    + +S  +S+ AE P+F+  L  +   +    ++   C
Sbjct: 304 NITIVNLSDAGMYQCVAENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKVGGEVVIEC 363

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKN 569
           +    P   Y+W +  E+       L + +R  I ++   +R +N  + D   Y C A N
Sbjct: 364 KPKASPRPVYTWRKGREI-------LRENERITISEDG-NLRIINVTKSDAGSYTCIATN 415

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
              T  S+    V+   P+    P  S +   GE   +      + +    F W  +G++
Sbjct: 416 HFGTASSTGN--VVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHL 473

Query: 629 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLIVLHGP 679
           I        FE        G+L+I  +    +G Y C   T+V  +  S    +++ GP
Sbjct: 474 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKL--SAAADLIVRGP 530



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 72/335 (21%)

Query: 208 ILNDITLS--------CYAGGYPNPSYEWFKEDYVQDRLVANLIDPL-SDKRFTLSGGNL 258
           I+NDI ++        C A G P P+Y W K             DPL + +R  +  G L
Sbjct: 255 IINDIHVAMEESVFWECKANGRPKPTYRWLKNG-----------DPLLTRERIQIEQGTL 303

Query: 259 ---IINDPRQVEDRGSYHCKASNKFG--------SIISESVQLAFGFIGEFNLKRAPEIG 307
              I+N    + D G Y C A NK G        S+I+ES   +   +    L +     
Sbjct: 304 NITIVN----LSDAGMYQCVAENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKV---- 355

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
               G+ +    P   P   Y W +      + E++R+ +S DG L    + + DAG+Y+
Sbjct: 356 ---GGEVVIECKPKASPRPVYTWRKGR--EILRENERITISEDGNLRIINVTKSDAGSYT 410

Query: 368 C---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VA 423
           C   N     S TG      P KV        +  P++   T       G+ + L C V 
Sbjct: 411 CIATNHFGTASSTGNVVVKDPTKV--------MVPPSSMDVT------VGESIVLPCQVT 456

Query: 424 FGYPVP-SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDR 474
             + +   + WT  G  +  +   ++F R+        L I N++++  G+Y+C      
Sbjct: 457 HDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSV 516

Query: 475 SALESSVTISIQAEPNFTIPLT-DKHMDNQADLTW 508
             L ++  + ++  P     +T D+  D  A L+W
Sbjct: 517 DKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSW 551


>gi|26335725|dbj|BAC31563.1| unnamed protein product [Mus musculus]
          Length = 498

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 168/492 (34%), Positives = 254/492 (51%), Gaps = 27/492 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        ++    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KINGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 135 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 192

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P   + G  V+LEC A 
Sbjct: 193 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFAL 250

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 251 GNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 310

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  +DR  
Sbjct: 311 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLTRDRIQ 363

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+   P F +  L+  T    G
Sbjct: 364 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVG 422

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V I C P+A+P+P + W+K   I+    R  I E+GNL I  V++ D+G Y+C ATN 
Sbjct: 423 GEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATNH 482

Query: 664 HGMDESKGRLIV 675
            G   S G +IV
Sbjct: 483 FGTASSTGNVIV 494



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 21/269 (7%)

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
           C A G P  T  W R      ++  P+  + R    + +L I     E D   Y+C A+N
Sbjct: 247 CFALGNPVPTILWRR------ADGKPIARKARRHKSNGILEIPNFQQE-DAGSYECVAEN 299

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 629
                 +  QL     +P++ +  + ++ +     +V   C     PKP + W K+G+ +
Sbjct: 300 SRGKNVAKGQL-TFYAQPNWVQ--IINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPL 356

Query: 630 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL-IVLHGPSYYEQLPPK 688
            +  R +I E G L I+ V+  D+G+Y C A N HG+  S   L ++   P +   L  +
Sbjct: 357 LTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAESPDFSRTLLKR 415

Query: 689 IT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 747
           +T +     + + C           Y W     R G   L E E   I+ DG  L I N 
Sbjct: 416 VTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREILRENERITISEDGN-LRIINV 467

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEG 776
           + +DAG Y C+  +  G  S+   VIV+G
Sbjct: 468 TKSDAGSYTCIATNHFGTASSTGNVIVKG 496



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 639
           V   +PS    PL+SE        V + C  +  PKP   WK +G    IG   R  + +
Sbjct: 27  VFVQEPSHVMFPLDSEEK-----KVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVD 81

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
              L+ +P    D+G Y C ATN  G   S+  +L   +  ++  +    +++   + + 
Sbjct: 82  GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141

Query: 699 LRCSA--HTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 749
           L C    H+ EL   +Y W  N            E P+       ++ + G L I     
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           +D G Y CVV +TV      T   V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209


>gi|380792749|gb|AFE68250.1| contactin-4 isoform a precursor, partial [Macaca mulatta]
          Length = 487

 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 169/487 (34%), Positives = 253/487 (51%), Gaps = 27/487 (5%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP FI++P+ V+F L        + L+C   G P P   W        +L    +
Sbjct: 20  DSTLHGPIFIQEPSPVMFPLDSEE--KKVKLNCEVKGNPKPHIRW--------KLNGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DIGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P A   G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA--KGATVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  + ++ W C+A G P  TY W +NGE       PL  
Sbjct: 306 ARGQLTFYAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYRWLKNGE-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           +DR  I+   L I  +N   D  MYQC A+N+    +S+A+L V+ + P F +  L+  T
Sbjct: 359 RDRIQIEQGTLNITIVNLS-DAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRIT 417

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG V I C P+A+PKP + WKK  +I+    R  I E+GNL I  V++ D+G Y+C
Sbjct: 418 LVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTC 477

Query: 659 TATNVHG 665
            ATN  G
Sbjct: 478 IATNHFG 484



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 156/393 (39%), Gaps = 62/393 (15%)

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRAS 471
           KV+L C   G P P   W   G+ +     F       + ++  PN K +D G Y C A+
Sbjct: 45  KVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPN-KTQDAGTYQCTAT 103

Query: 472 NDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF----------GVP----D 517
           N    +     +S +A+  F       ++DN    T +  +           G P    +
Sbjct: 104 NSFGTI-----VSREAKLQFA------YLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGE 152

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYS 576
           ++Y+W  N         P    +R F+      +     E+ D   Y C   N +     
Sbjct: 153 LSYAWIFN-------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKV 205

Query: 577 SAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DG 626
                 L L+         P  + +  E+   A +G  V + C     P P  +W++ DG
Sbjct: 206 LGPPTPLILRNDGVMGEYEPKIEVQFPETVPTA-KGATVKLECFALGNPVPTIIWRRADG 264

Query: 627 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
             I    RR    NG L I    ++D+G+Y C A N  G + ++G+L     P++ +++ 
Sbjct: 265 KPIARKARRH-KSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKI- 322

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
             I +A   N+   C A+        Y W  NG  +   D        I I+ G L IT 
Sbjct: 323 NDIHVAMEENVFWECKANGRP--KPTYRWLKNGEPLLTRD-------RIQIEQGTLNITI 373

Query: 747 ASFADAGEYECVVKSTVGKI--STKTTVIVEGP 777
            + +DAG Y+C+ ++  G I  + + +VI  GP
Sbjct: 374 VNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 21/266 (7%)

Query: 504 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
           A +   C A G P  T  W R      ++  P+  + R    + +L I     E D  +Y
Sbjct: 241 ATVKLECFALGNPVPTIIWRR------ADGKPIARKARRHKSNGILEIPNFQQE-DAGLY 293

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 623
           +C A+N      +  QL     +P++ ++   ++ +     NV   C     PKP + W 
Sbjct: 294 ECVAENSRGKNVARGQL-TFYAQPNWIQKI--NDIHVAMEENVFWECKANGRPKPTYRWL 350

Query: 624 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSYY 682
           K+G  + +  R +I E G L I+ V+  D+G+Y C A N HG+  S   L V+  GP + 
Sbjct: 351 KNGEPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFS 409

Query: 683 EQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 741
             L  +IT +     + + C           Y W     + G   L E E   I+ DG L
Sbjct: 410 RTLLKRITLVKVGGEVVIECKPKASP--KPVYTW-----KKGRDILKENERITISEDGNL 462

Query: 742 LEITNASFADAGEYECVVKSTVGKIS 767
             I N + +DAG Y C+  +  G  S
Sbjct: 463 -RIINVTKSDAGSYTCIATNHFGTAS 487



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 38/209 (18%)

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 639
           +   +PS    PL+SE        V + C  +  PKP   WK +G    IG   R  + E
Sbjct: 27  IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
              L+ +P    D+G Y CTATN  G   S+  +L   +  ++  +    +++   + + 
Sbjct: 82  GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141

Query: 699 LRCSA--HTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 749
           L C    H+ EL   +Y W  N            E P+       ++ + G L I     
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           +D G Y CVV +TV      T   V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209


>gi|427797289|gb|JAA64096.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
           pulchellus]
          Length = 1331

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 222/817 (27%), Positives = 374/817 (45%), Gaps = 77/817 (9%)

Query: 186 IPRGPYFIKQPT-DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKE----DYVQDRL 238
           +P  P  +KQP  + ++ +S+     D    L C A G+P P+YEW K     DYV    
Sbjct: 1   VPSPPTMVKQPKHEQLYQVSQSQDELDKPFLLECEAQGHPEPTYEWTKNNKEFDYVS--- 57

Query: 239 VANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 296
                    DKR +     G L+   P  V D G Y C+A+N  G+ +S +V L    + 
Sbjct: 58  --------YDKRISQQPRRGTLVFTKPDDV-DEGLYQCRATNLHGTSVSNAVFLRKAELN 108

Query: 297 EFNLKRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGAL 353
            F  +   E+   +    ++ C+PPT YP  N +W   Y    +      R+    +G L
Sbjct: 109 NFAEETTKEVYVVEGDPLSLDCNPPTGYPRPNIFWLIQYSSGALRNVNSSRITADPEGDL 168

Query: 354 YFSALEQIDA---GNYSCNVQSKVSDTGRNGPFFPLKVFP--------HSNFQQLKFPNN 402
           +FS +E  DA     Y+C+  S      + G    LKV P        H+  +Q   P N
Sbjct: 169 HFSRVELGDALSDAVYTCSATSVFRREYKIGNKIQLKVEPTSSAGKAEHAPVKQYLSPPN 228

Query: 403 FPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS-PLPRNAYFENFNRILTIPNVKVE 461
                      G +++L C+  G P+P  +W++RG+ P  R   + N+ + L I +V  E
Sbjct: 229 L------VALRGHELKLYCIYGGTPLPQISWSKRGANPTSRRFTYSNYGKTLEIRSVSFE 282

Query: 462 DQGEYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTY 520
           D+G Y C+A+N     ++ ++ + ++A P +     + +   +  +++ C A G+P+   
Sbjct: 283 DEGTYECQANNGVGVAQTHAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATGIPEPKL 342

Query: 521 SWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            WF NG       +P+E  +   R  ++  +LTI  L  +RD A+YQC A N     +  
Sbjct: 343 QWFVNG-------VPVEKAEPNPRRKVEGPLLTIEALT-KRDTAVYQCNASNPHGYAFRD 394

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
             L VL L P+  + P E  T A     VT+ C    AP+P+  W K+   + +GGR ++
Sbjct: 395 FYLNVLALPPTITEAP-EQLTLAVVTSRVTLRCRVFGAPRPEVKWMKEAQEL-TGGRYRV 452

Query: 638 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
            ++G+L I  +   D G Y+C A+N  G   + G L V  G +   Q P    +AA ++ 
Sbjct: 453 LDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSLEV-KGKTLITQPPENYEVAADKSA 511

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
             RC+A  +  L++   W  NG  +      E +   +      L IT     D+G Y C
Sbjct: 512 TFRCNAEADPSLELKIEWLFNGQPVDP----EADARMVQAGDNSLTITRTIELDSGIYTC 567

Query: 758 VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 817
           V ++ +     + T+ V+  P  P  V++ +     A ++W        PI  Y I   T
Sbjct: 568 VARTELDSDRAQATLTVQDVPNPPQMVKI-DCDGLMALVEWKPTGDRRAPILSYSIQYNT 626

Query: 818 NWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
           +++  TW +   ++   +            +  + PW+ Y F+V+A N++G   PS  S 
Sbjct: 627 SFSPDTWEDAFVNIPAPDT---------KFKVSMSPWANYTFRVVARNKIGPSLPSGASS 677

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN--DTEFQ 934
           +  TP D P++ P R+ G G +  +L I+W P+P  + NAP  +YK+ W++ +  D  + 
Sbjct: 678 RCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGFFYKVLWKRDDIPDATWN 737

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           S  ++++          P+   +  Y +KV+A N  G
Sbjct: 738 SRIIEDWKQNRHVEYGQPT---FKPYRIKVEAHNRRG 771


>gi|198435834|ref|XP_002122484.1| PREDICTED: similar to Contactin-2 precursor (Axonin-1) (Axonal
           glycoprotein TAG-1) (Transient axonal glycoprotein 1)
           (TAX-1) [Ciona intestinalis]
          Length = 815

 Score =  283 bits (723), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 226/826 (27%), Positives = 377/826 (45%), Gaps = 87/826 (10%)

Query: 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRF 251
           FI++P+D +      +I   I+ +C A    +P Y W K+         + +D     RF
Sbjct: 22  FIEEPSDKLVPSDSTAI---ISFTCKAN-VVDPVYTWRKD--------GSPVDTADGSRF 69

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQN 310
            + GG L I++P Q  D G Y C  S+  G+++S   +L FG++GEF+     P      
Sbjct: 70  QVHGGTLEISNP-QDSDAGDYQCVLSSVDGTVVSNYGKLVFGWVGEFSPSVNEPVTTVVG 128

Query: 311 WGKAMFCDPPTNYP--GVNYYWARDYFPNFVEEDKRV--------FVS-YDGALYFSALE 359
            G ++ C  P+  P   V++YW        ++++ R+        +VS  DG LY +   
Sbjct: 129 KGVSIKCPQPSYAPEHSVSFYWEA------IDKNTRIQTPCNQSHYVSQTDGTLYIANPT 182

Query: 360 QIDAGNYSCNVQSKVSDTGR----NGPFFPLKVFPHSNFQQLKFPNNF---PKTFPEAPK 412
            ID    +CNV+S     G+         PL V    +   ++F   F   PK    A +
Sbjct: 183 AIDQDTLTCNVRSLWKYNGKPEKAESSIVPLTV----DSSNVEFDPEFMLVPKPVTNAKR 238

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASN 472
            G  + +EC A G P P  +WT+   P+P N       +++ +  V  +  G Y C A N
Sbjct: 239 GGYAI-IECFASGRPTPQLSWTKLDGPMPVNHTISEAGQLI-LKAVTEDMAGTYRCTAVN 296

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL-NS 531
            + +  +   + ++  P +T P++   +D     +  C A  VP  +++W +NG +L +S
Sbjct: 297 SKGSTHADGELRLEYAPQWTSPISSFSVDRTTSASIQCGAIAVPTPSFTWLKNGVVLGDS 356

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
             + + + D     D      Y   E D  MYQC   N   + +SSA++ V+++ P+  +
Sbjct: 357 GNINIGNFDGGSQLD-----IYDVSEADQGMYQCVVSNSHGSIFSSAKMAVVSIPPTIIE 411

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN-IIGSGGRRKIFENGNLLISPVSR 650
            P+   T A     V I C+ EAAP    VW KD + ++     +   ++  L IS ++ 
Sbjct: 412 -PVPDITRAALDNEVIITCDIEAAPAAVIVWTKDTDQVLVIDNNKYTLQSDGLKISNLAN 470

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D+G+Y+C A N  G  +S+G L + + P+     P    +     +Q+ C A  +  L+
Sbjct: 471 GDAGVYNCYAENDMGNVQSEGTLQI-YLPTVITTGPQGNEVIVGDLVQMGCQATHDNQLE 529

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           + + WT NG  I   D       +  I G  + I + S   AG Y+C   + VG      
Sbjct: 530 LTWSWTQNGEAISVFD------KHYTISGDSILIKDVSSEQAGIYQCCANTDVGTDCASA 583

Query: 771 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEH 829
           TV+V  PP  P  V V   ++ + T+QW  G  NG  +  Y + A+  ++ +W F V+  
Sbjct: 584 TVVVMAPPEPPTNVMVTNSYENTVTLQWQAGNDNGAAVDLYLVEAKCGFDCSWRFIVTSP 643

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
           +    V+  T + +      L+P + Y F+V A N+ G G PS PS  Y++P   P + P
Sbjct: 644 IF---VNTTTCQVKK-----LLPNNDYMFRVTAMNKYGTGAPSEPSAVYSSPPGAPIRHP 695

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK------------NDTEFQS-- 935
            +I G   ++G+L + W+P+  +     +I YK+  RK+            NDT      
Sbjct: 696 IKIKGASKELGELVVQWQPMQPKYFGDNDISYKVVIRKQVRGDPVVLPVNLNDTNVPPVD 755

Query: 936 -----ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
                E +   G       ++ +   +  YEVKVQA+N+ GPGP S
Sbjct: 756 NRPWIEQVAIGGTKNQTTFKVNASEIFVPYEVKVQAVNNYGPGPFS 801


>gi|427792699|gb|JAA61801.1| hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 1314

 Score =  282 bits (721), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 221/813 (27%), Positives = 372/813 (45%), Gaps = 77/813 (9%)

Query: 190 PYFIKQPT-DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKE----DYVQDRLVANL 242
           P  +KQP  + ++ +S+     D    L C A G+P P+YEW K     DYV        
Sbjct: 85  PTMVKQPKHEQLYQVSQSQDELDKPFLLECEAQGHPEPTYEWTKNNKEFDYVS------- 137

Query: 243 IDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL 300
                DKR +     G L+   P  V D G Y C+A+N  G+ +S +V L    +  F  
Sbjct: 138 ----YDKRISQQPRRGTLVFTKPDDV-DEGLYQCRATNLHGTSVSNAVFLRKAELNNFAE 192

Query: 301 KRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSA 357
           +   E+   +    ++ C+PPT YP  N +W   Y    +      R+    +G L+FS 
Sbjct: 193 ETTKEVYVVEGDPLSLDCNPPTGYPRPNIFWLIQYSSGALRNVNSSRITADPEGDLHFSR 252

Query: 358 LEQIDA---GNYSCNVQSKVSDTGRNGPFFPLKVFP--------HSNFQQLKFPNNFPKT 406
           +E  DA     Y+C+  S      + G    LKV P        H+  +Q   P N    
Sbjct: 253 VELGDALSDAVYTCSATSVFRREYKIGNKIQLKVEPTSSAGKAEHAPVKQYLSPPNL--- 309

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS-PLPRNAYFENFNRILTIPNVKVEDQGE 465
                  G +++L C+  G P+P  +W++RG+ P  R   + N+ + L I +V  ED+G 
Sbjct: 310 ---VALRGHELKLYCIYGGTPLPQISWSKRGANPTSRRFTYSNYGKTLEIRSVSFEDEGT 366

Query: 466 YICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR 524
           Y C+A+N     ++ ++ + ++A P +     + +   +  +++ C A G+P+    WF 
Sbjct: 367 YECQANNGVGVAQTHAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATGIPEPKLQWFV 426

Query: 525 NGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
           NG       +P+E  +   R  ++  +LTI  L  +RD A+YQC A N     +    L 
Sbjct: 427 NG-------VPVEKAEPNPRRKVEGPLLTIEALT-KRDTAVYQCNASNPHGYAFRDFYLN 478

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641
           VL L P+  + P E  T A     VT+ C    AP+P+  W K+   + +GGR ++ ++G
Sbjct: 479 VLALPPTITEAP-EQLTLAVVTSRVTLRCRVFGAPRPEVKWMKEAQEL-TGGRYRVLDSG 536

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L I  +   D G Y+C A+N  G   + G L V  G +   Q P    +AA ++   RC
Sbjct: 537 DLQIDDLLVTDQGEYTCYASNKFGDASASGSLEV-KGKTLITQPPENYEVAADKSATFRC 595

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
           +A  +  L++   W  NG  +      E +   +      L IT     D+G Y CV ++
Sbjct: 596 NAEADPSLELKIEWLFNGQPVDP----EADARMVQAGDNSLTITRTIELDSGIYTCVART 651

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN- 820
            +     + T+ V+  P  P  V++ +     A ++W        PI  Y I   T+++ 
Sbjct: 652 ELDSDRAQATLTVQDVPNPPQMVKI-DCDGLMALVEWKPTGDRRAPILSYSIQYNTSFSP 710

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
            TW +   ++   +            +  + PW+ Y F+V+A N++G   PS  S +  T
Sbjct: 711 DTWEDAFVNIPAPDT---------KFKVSMSPWANYTFRVVARNKIGPSLPSGASSRCTT 761

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN--DTEFQSETL 938
           P D P++ P R+ G G +  +L I+W P+P  + NAP  +YK+ W++ +  D  + S  +
Sbjct: 762 PEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGFFYKVLWKRDDIPDATWNSRII 821

Query: 939 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +++          P+   +  Y +KV+A N  G
Sbjct: 822 EDWKQNRHVEYGQPT---FKPYRIKVEAHNRRG 851


>gi|405966827|gb|EKC32064.1| Contactin [Crassostrea gigas]
          Length = 794

 Score =  279 bits (714), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 185/549 (33%), Positives = 275/549 (50%), Gaps = 25/549 (4%)

Query: 441 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA-LESSVTISIQAEPNFTIPLTDKH 499
           PR A F + NR+L I +V++ED G YIC AS   +A  + +VT+ I+ +P F+ PL  +H
Sbjct: 3   PR-ASFTDHNRVLIIEDVRIEDGGTYICHASRYTTARTQKNVTLFIETKPYFSYPLKSQH 61

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
           +D  + LTW CEA  +P+  Y W+++G  L    +P     +  I  NVLTI+ L+   D
Sbjct: 62  VDIGSKLTWRCEATAMPEPVYEWYKDGVRL--VIIP----GKISIVRNVLTIQNLDIS-D 114

Query: 560 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 619
             MYQC A+N     ++  QLRVL   PSF K PL    +   GGN+T  CNPEAAP P 
Sbjct: 115 NGMYQCSAENIYGKSFTEGQLRVLAFPPSFVKEPLIDVMFGVVGGNITYPCNPEAAPTPT 174

Query: 620 FVWKKDG-----NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           + W K+      N   +  R ++ +NGNLLI  ++  D   Y+C A N  G   S G+L 
Sbjct: 175 YTWLKNNMELNLNPGDTTSRIRMLQNGNLLILNINPGDVAYYTCRAENQFGRSTSTGQLQ 234

Query: 675 VLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 733
           +         LPP  + +  ++   LRC A    L DV Y W  N   I +++ N     
Sbjct: 235 I--ADKVVIGLPPVNVQVKVNQTAFLRCQASYNSLQDVIYTWLFND-EIIDINKNVYYKQ 291

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE--VHK 791
            ++     L +T A F  +G+Y C  ++T         + V G    P GV  ++  +  
Sbjct: 292 GVSQTLTGLFVTGAQFKHSGKYTCRAQTTKEHTEAWAFLTVLGNE--PAGVYAIQSSIGT 349

Query: 792 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV--IGKEVDRYTGRKEASIENV 849
           +S  + WT GA+NG  I  + + A     + W+   +HV  +   V     +K       
Sbjct: 350 SSLRLSWTVGASNGESILFHTVEALPVMLNEWYTAVDHVSDVSSIVPGLDNKKRVVEVRG 409

Query: 850 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 909
           L P   Y F+V + N  G G  S  S  Y T    P   P+ +GGG G +GDL+I+W PL
Sbjct: 410 LNPGCGYRFRVYSTNSFGVGPRSRQSDAYTTRYGPPTHPPTHVGGGYGSVGDLTITWMPL 469

Query: 910 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
              +   P I Y +++R +N T+  +  ++  GNVG  V ++ +  YY  Y+V +Q  ND
Sbjct: 470 EDYQLGGPGIGYHVYYR-RNLTDTWTNKVQLTGNVGKYVTQVGAYNYYLLYDVMIQPYND 528

Query: 970 VGPGPESEV 978
           +G GP S V
Sbjct: 529 LGQGPNSSV 537



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 144/602 (23%), Positives = 232/602 (38%), Gaps = 65/602 (10%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASN 472
           G K+   C A   P P Y W + G  L            +LTI N+ + D G Y C A N
Sbjct: 65  GSKLTWRCEATAMPEPVYEWYKDGVRLVIIPGKISIVRNVLTIQNLDISDNGMYQCSAEN 124

Query: 473 --DRSALESSVTISIQAEPNFTI-PLTDKHMD-NQADLTWTCEAFGVPDVTYSWFRNGEL 528
              +S  E  + + +   P+F   PL D        ++T+ C     P  TY+W +N   
Sbjct: 125 IYGKSFTEGQLRV-LAFPPSFVKEPLIDVMFGVVGGNITYPCNPEAAPTPTYTWLKNNME 183

Query: 529 LNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
           LN    P +   R   +Q+  L I  +NP  D A Y CRA+NQ     S+ QL++   K 
Sbjct: 184 LNLN--PGDTTSRIRMLQNGNLLILNINPG-DVAYYTCRAENQFGRSTSTGQLQIAD-KV 239

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG------ 641
                P+  +    +   +    +  +     + W  +  II    +   ++ G      
Sbjct: 240 VIGLPPVNVQVKVNQTAFLRCQASYNSLQDVIYTWLFNDEIIDI-NKNVYYKQGVSQTLT 298

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLR 700
            L ++      SG Y+C A       E+   L VL + P+    +   I  ++ R L   
Sbjct: 299 GLFVTGAQFKHSGKYTCRAQTTKEHTEAWAFLTVLGNEPAGVYAIQSSIGTSSLR-LSWT 357

Query: 701 CSA--------HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 752
             A        HT E L V     +  V   + D++ +  P ++    ++E+        
Sbjct: 358 VGASNGESILFHTVEALPVMLNEWYTAVDHVS-DVSSI-VPGLDNKKRVVEV--RGLNPG 413

Query: 753 GEYECVVKST----VGKISTKTTVIVE--GPPGLP-----GGVQVVEVHKTSATIQWT-- 799
             Y   V ST    VG  S ++       GPP  P     GG   V       TI W   
Sbjct: 414 CGYRFRVYSTNSFGVGPRSRQSDAYTTRYGPPTHPPTHVGGGYGSVG----DLTITWMPL 469

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
           +    G P   Y +  R N   TW N  +  +   V +Y  +  A    +L     Y+  
Sbjct: 470 EDYQLGGPGIGYHVYYRRNLTDTWTNKVQ--LTGNVGKYVTQVGAYNYYLL-----YDVM 522

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP--REKQNAP 917
           +   N+LG G  SS S  Y +  + P  + + +         L ++W+P+P  RE     
Sbjct: 523 IQPYNDLGQGPNSSVSTIY-SAEEIPSISITNVQAYPYNATALMVTWDPVPDTREVMKGK 581

Query: 918 NIYYKI-FW-RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
            + Y++ +W R  +D    S + +   + G+ +  +P  +    Y V +QA+N  G    
Sbjct: 582 LLGYQVNYWERFTDDPIMNSISWRGQMSSGLVIGLLPDMW----YTVNLQALNMAGMSQI 637

Query: 976 SE 977
           SE
Sbjct: 638 SE 639



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 137/388 (35%), Gaps = 55/388 (14%)

Query: 258 LIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL---KRAPEIGNQNWGKA 314
           LII D R +ED G+Y C AS    +   ++V L       F+     +  +IG+    K 
Sbjct: 14  LIIEDVR-IEDGGTYICHASRYTTARTQKNVTLFIETKPYFSYPLKSQHVDIGS----KL 68

Query: 315 MFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV 374
            +    T  P   Y W +D     +   K   V     L    L+  D G Y C+ ++  
Sbjct: 69  TWRCEATAMPEPVYEWYKDGVRLVIIPGKISIVR--NVLTIQNLDISDNGMYQCSAENIY 126

Query: 375 SDTGRNGPFFPLKVFPHSNFQQLKFPNNF---PKTFPEAPKAGDKVRLECVAFGYPVPSY 431
                       K F     + L FP +F   P         G  +   C     P P+Y
Sbjct: 127 G-----------KSFTEGQLRVLAFPPSFVKEPLIDVMFGVVGGNITYPCNPEAAPTPTY 175

Query: 432 NWTRR--------GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
            W +         G    R    +N N  L I N+   D   Y CRA N      S+  +
Sbjct: 176 TWLKNNMELNLNPGDTTSRIRMLQNGN--LLILNINPGDVAYYTCRAENQFGRSTSTGQL 233

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAF--GVPDVTYSWFRNGELLNSETLPLEDQDR 541
            I  +    +P  +  +         C+A    + DV Y+W  N E+++       +++ 
Sbjct: 234 QIADKVVIGLPPVNVQVKVNQTAFLRCQASYNSLQDVIYTWLFNDEIIDI------NKNV 287

Query: 542 YFIQ--DNVLTIRYLNPE--RDPAMYQCRAKNQLKTRYSSAQLRVL--------TLKPSF 589
           Y+ Q     LT  ++     +    Y CRA+   +   + A L VL         ++ S 
Sbjct: 288 YYKQGVSQTLTGLFVTGAQFKHSGKYTCRAQTTKEHTEAWAFLTVLGNEPAGVYAIQSSI 347

Query: 590 KKRPLE-SETYAGEGGNVTIFCNPEAAP 616
               L  S T     G   +F   EA P
Sbjct: 348 GTSSLRLSWTVGASNGESILFHTVEALP 375



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 136/375 (36%), Gaps = 62/375 (16%)

Query: 208 ILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267
           I + +T  C A   P P YEW+K+     RLV  +   +S  R  L+  NL       + 
Sbjct: 64  IGSKLTWRCEATAMPEPVYEWYKDGV---RLVI-IPGKISIVRNVLTIQNL------DIS 113

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPG 325
           D G Y C A N +G   +E       F   F  +   ++     G  +   C+P    P 
Sbjct: 114 DNGMYQCSAENIYGKSFTEGQLRVLAFPPSFVKEPLIDVMFGVVGGNITYPCNPEAA-PT 172

Query: 326 VNYYWARDYFP---NFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382
             Y W ++      N  +   R+ +  +G L    +   D   Y+C  +++   +   G 
Sbjct: 173 PTYTWLKNNMELNLNPGDTTSRIRMLQNGNLLILNINPGDVAYYTCRAENQFGRSTSTG- 231

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYN--------WT 434
                        QL+  +   K     P    +V++   AF     SYN        W 
Sbjct: 232 -------------QLQIAD---KVVIGLPPVNVQVKVNQTAFLRCQASYNSLQDVIYTWL 275

Query: 435 RRGSPLP--RNAYF-ENFNRILT---IPNVKVEDQGEYICRASNDRSALESSVTISIQA- 487
                +   +N Y+ +  ++ LT   +   + +  G+Y CRA   +   E+   +++   
Sbjct: 276 FNDEIIDINKNVYYKQGVSQTLTGLFVTGAQFKHSGKYTCRAQTTKEHTEAWAFLTVLGN 335

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL---NSETLPLEDQDRYFI 544
           EP     +      +   L+WT  A            NGE +     E LP+   + Y  
Sbjct: 336 EPAGVYAIQSSIGTSSLRLSWTVGA-----------SNGESILFHTVEALPVMLNEWYTA 384

Query: 545 QDNVLTIRYLNPERD 559
            D+V  +  + P  D
Sbjct: 385 VDHVSDVSSIVPGLD 399



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 13/105 (12%)

Query: 190 PYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           P F+K+P  DV+F +    +  +IT  C     P P+Y W K +     L  N  D  S 
Sbjct: 142 PSFVKEPLIDVMFGV----VGGNITYPCNPEAAPTPTYTWLKNNM---ELNLNPGDTTSR 194

Query: 249 KRFTLSGGNLIIN-DPRQVEDRGSYHCKASNKFG-SIISESVQLA 291
            R   +G  LI+N +P    D   Y C+A N+FG S  +  +Q+A
Sbjct: 195 IRMLQNGNLLILNINP---GDVAYYTCRAENQFGRSTSTGQLQIA 236


>gi|321459544|gb|EFX70596.1| hypothetical protein DAPPUDRAFT_309386 [Daphnia pulex]
          Length = 1246

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 228/804 (28%), Positives = 361/804 (44%), Gaps = 59/804 (7%)

Query: 190 PYFIKQP--TDVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  +KQP   +++F +++R   ND    + C A G P P Y W K  +  D L  +  D 
Sbjct: 29  PQVVKQPPSDELLFQVAQRIDENDKPFIIECEAEGEPAPKYRWVKNGF--DFLWQSYDDR 86

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
           +S +      G L+I  PR  ED G Y C ASN++G+  S SV +    +  F  +    
Sbjct: 87  ISQQP---GRGTLVITTPRD-EDIGQYQCFASNEWGTATSNSVFVRKSDLNSFKDEPPMT 142

Query: 306 IGNQNWGK-AMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSALEQID 362
           +  Q     ++ C PP  +P  + YW        +      R+ V  +G L+FS + + D
Sbjct: 143 VSAQEGSPFSLRCQPPDGWPKPSVYWMMQNSNGALRSINSSRMTVDPEGTLWFSNVTRED 202

Query: 363 AGN---YSCNVQSKVSDTGRNGPFFPLKVFP--HSNFQQLKFP-NNFPKTFPEAPKAGDK 416
             +   Y+C+  S   +  + G    L V     +  Q    P + +          G  
Sbjct: 203 TSDDFVYACSATSLFRNEYKLGNKVYLDVIATGSAAAQNRHEPVSQYVSRKNAVAHRGKS 262

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           + L CV  G P+P   WT+ G+ LP     + ++ + L I +V  ED G Y C ASN   
Sbjct: 263 IELWCVFGGTPLPQIRWTKEGAALPAGRTTYSSYGKTLIIKSVDSEDAGNYECEASNGVG 322

Query: 476 ALES-SVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSET 533
             +S S+++ + A P FT+   + ++  + +L  + CEA G P     W  NG+ +    
Sbjct: 323 LAKSYSISLQVLAAPYFTVE-PEVYVGAEDELAEFRCEANGSPAPEIKWIHNGKPIEEAA 381

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           +      R  +  N + I  L  + D   Y C A N +   Y    L VL L P  +  P
Sbjct: 382 V----NPRRKVFPNRIVIERLQ-KSDTGNYGCNATNSIGYVYKDVYLNVLALAPDIEDAP 436

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDS 653
            ++ T  G   N+T  C    +PKP   W +DG  + +GGR ++ ++G+L I  V+  D+
Sbjct: 437 DDTATVDGSAVNLT--CKVFGSPKPLVKWIRDGLEL-TGGRYRVMDSGDLEIRDVTFTDA 493

Query: 654 GIYSCTATNVHGMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
           G+YSC ATN  G   + G LIV        GP  YE       +AA +    RC+A  + 
Sbjct: 494 GVYSCHATNKFGSANANGTLIVKERTVIRDGPEDYE-------VAAGQTATFRCNAVADS 546

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
            L++   W H    I   D  E E   +      L IT  +  D G+Y C  K+ +    
Sbjct: 547 SLNLTIEWLHADQLI---DF-EQEPRFVQSQDSSLTITKTTELDTGDYTCRAKTILDLAE 602

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
            K T+IV+  P  P  V + + +   A I+WT    N  PI  Y I   T++    + VS
Sbjct: 603 DKATLIVQDVPNRPRMVGI-QCNNRDAAIEWTPSGDNRAPILTYTIQFNTSFTPDSWEVS 661

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
              +     R+       +E  + PWS Y F+VIA N++G   PS  S    TP D P +
Sbjct: 662 FENVPATETRF------KVE--MSPWSNYTFRVIARNKIGPSLPSDHSSMCTTPPDVPNK 713

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
            P  + G G    +L ++W P+P  + N  N +Y+++WR+  D   +   ++   +   +
Sbjct: 714 NPDNVEGRGTSPTNLVVTWNPMPEIEHNGRNFHYRVYWRR--DIPGEDWNIEMISDWRQS 771

Query: 948 VVRIPSEFYYTEYEVKVQAINDVG 971
            + IP++  +  Y +KV A N +G
Sbjct: 772 SILIPNQPTFKRYRIKVVAFNQIG 795


>gi|391347861|ref|XP_003748172.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Metaseiulus
           occidentalis]
          Length = 1257

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 231/818 (28%), Positives = 367/818 (44%), Gaps = 74/818 (9%)

Query: 185 KIPRGPYFIKQPT-DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           ++P  P  IKQP  + +F +++     D    L C A G P P YEW K   V D +  +
Sbjct: 22  QVPHPPMMIKQPEHEQLFQVAQSQDETDKPFVLECEAEGTPEPEYEWIKNGRVFDYVSYD 81

Query: 242 LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
                  KR     G LI   P  V D G Y CKA+N++G+ +S +V L    +  F   
Sbjct: 82  KRISKQPKR-----GTLIFTKPDDV-DEGLYQCKATNQYGTSVSNAVFLRKSELSNFADD 135

Query: 302 RAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSAL 358
           +  EI   +    ++ C PP  YP  + +W        +      R+    +G L+FS +
Sbjct: 136 KTQEIFVMEGEPLSLDCKPPQGYPAPSVFWLIQSGNGALRSFNSSRITADPEGKLHFSQV 195

Query: 359 EQIDA---GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP--NNFPKTFPEAPKA 413
            + D+     Y+C+  S      + G    LKV P S+  + + P  + +     + P  
Sbjct: 196 LRADSLADAVYTCSATSHFRREYKIGNKVVLKVEPKSSTGKTEVPPVHQYTSGPQQDPLR 255

Query: 414 GDKVRLECVAFGYPVPSYNWTRRG-SPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRA 470
           G +  L C+  G P+P   WT++G S L  +   E  N+ + L I +   ED+G Y C A
Sbjct: 256 GKRHELHCIFGGTPLPQIRWTKKGTSSLENSNRVETVNYGKTLVIKSPDFEDEGVYECTA 315

Query: 471 SNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           SN     +S S+ + I+A P +      K    +  +T+ C A GVP+    WF NG   
Sbjct: 316 SNGVGPPKSHSMNVKIKAAPYWVKAPEKKDAAEEETVTFECNATGVPEPKLQWFVNG--- 372

Query: 530 NSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
               +P+E      R  +Q N LTI  L  ++D A++QC A N L   +    L VL L 
Sbjct: 373 ----MPIEKAPASPRRKLQGNFLTIERLE-KKDTAVFQCNASNPLGYAFKDFYLNVLALP 427

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NIIG----SGGRRKIFEN 640
           PS  + P E  T A  G    + C    APKP   W K    +I G    +GGR K+ ++
Sbjct: 428 PSIIEAP-EQVTQAVVGSTAILKCRVFGAPKPTVKWIKTNAHSITGGRELTGGRYKVLDS 486

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G+L I+ V   D+G Y+C A+N  G   + G L V            ++      +   R
Sbjct: 487 GDLQINEVLVTDNGEYTCQASNKFGDTSASGTLDV-----------KELXGGRGESAVFR 535

Query: 701 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
           C+A  +  LD+   W  N   I   D  E +   I      L IT     D+G Y CV K
Sbjct: 536 CNAQADPTLDLTINWLFNDELI---DF-ERDPRMIKASDNSLTITRTLELDSGRYTCVAK 591

Query: 761 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
           + + K +   T+ V+  P  P  V+V    + +A ++W        PI  Y I   T++ 
Sbjct: 592 TELDKDTASATLTVQDVPNSPSIVKVT-CDQYTALVEWKPNGDRRAPILSYTIQYNTSFA 650

Query: 821 -STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
             TW +   ++   +            +  + PW+ Y F+VIA N++G   PS  S +  
Sbjct: 651 PDTWEDAFANIPAPDT---------RFKVSMSPWANYTFRVIARNKIGPSPPSETSMRCT 701

Query: 880 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK------NDTEF 933
           T    P++ P ++ G G +  +L ISW P+P  + NAP  +Y++ +++K      +++ +
Sbjct: 702 TAESIPHKNPDKVAGRGTQKDNLVISWTPMPPIEHNAPGFFYRVKYKRKDTENTADESSW 761

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
            +E ++++    IA   +P    +  Y +KV+A N  G
Sbjct: 762 ITEDIQDWRQGSIAKYGMP---VFKPYRIKVEAHNRRG 796


>gi|390339770|ref|XP_001198248.2| PREDICTED: contactin-2-like [Strongylocentrotus purpuratus]
          Length = 704

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 202/661 (30%), Positives = 306/661 (46%), Gaps = 59/661 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS- 247
           GP  ++QP + +FD +   +   ++  C A G    +Y W K+             PLS 
Sbjct: 22  GPILMQQPEETIFDTASNVV--SVSFHCRATGDEPITYTWTKDGA-----------PLSL 68

Query: 248 --DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN-LKRAP 304
             + R  ++ G L I  P +  D G Y C ASN+ GS+ S   +L F ++  F+    + 
Sbjct: 69  ATNARLVITPGQLTITSPERTVDGGEYVCMASNRVGSVRSLPAELVFAYVDLFDPSATST 128

Query: 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE-DKRVFVSYDGALYFSALEQIDA 363
           +      G  + C+PP +YPG+   W  +   + V+  D R+ V YDG L F      DA
Sbjct: 129 QSLTAGQGGCVTCNPPPHYPGILVNWFHEN--SLVDSSDSRIRVMYDGRLCFFYALASDA 186

Query: 364 GNYSCNVQSKVSDTG----RNGPFFPLKV---FPHSNFQQLKFPNNFPKTFPEAPKAGDK 416
           G Y C V+S V   G    R  P   + V   +P S  + ++   N P        AG+ 
Sbjct: 187 GAYRCQVKSNVLSEGGVHMRVSPLVTVTVNAGYPSSAIRIVQ--ENRPTDVTTI--AGED 242

Query: 417 VRLECVAFG----YPVPSYNWTRR---GSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
           V+ EC  +G      +P   W R    G+ LP + A  E    +L+I  V++ED G Y+C
Sbjct: 243 VKFECFFYGPQPTGQIPRVQWVRTSPPGAGLPTSRAVLEEGGEVLSIVGVQLEDAGSYLC 302

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
             ++  S   +S  +++   P +     D   D      W  EA       Y+W+RNGE+
Sbjct: 303 YINDVYSG--ASAGLNVAEAPTWVSEPLDAMKDINTMQEWNVEAEEAAQ--YTWYRNGEI 358

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
           L +       +DR+  ++N+ T+   + +  D AMYQC A N     YS+AQL V    P
Sbjct: 359 LTA-------RDRHQFRNNLETLIISDLKTTDTAMYQCFASNNHGMIYSAAQLSVRAFPP 411

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLIS 646
            F   P+E+E  A     VT  C+ +AAP P   W+ DG  I +  R  +  +  NL+I 
Sbjct: 412 MFLS-PMETEQPAPITATVTALCDVDAAPAPTVTWQHDGQPITNSARYNLTADPPNLVII 470

Query: 647 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
            V   D G Y CTATN +G    +G L +    +     P    +   ++  LRC A  +
Sbjct: 471 GVRVSDGGTYQCTATNSNGTVTGEGSLDI-KDSTVITGHPDNTLVEVGQSTTLRCKAAHD 529

Query: 707 ELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGK 765
           E L + Y+W HNGV I   DL+E++   ++  D G LEI +A   D GEY CV  +    
Sbjct: 530 ESLTLTYLWKHNGVAI---DLSEIDRYRMSERDNGNLEIVSAQSRDGGEYTCVALTVADS 586

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 825
             +  T+ +  PPG P G+  VEV   +A + W  G  N  PIT + I  +T+ +  W  
Sbjct: 587 DRSSATLDIAAPPGPPSGLS-VEVENLAANLSWVPGTDNNSPITSFTIEGQTDHSDEWVE 645

Query: 826 V 826
           +
Sbjct: 646 L 646


>gi|417406036|gb|JAA49700.1| Putative neural cell adhesion molecule l1-like protein isoform 3
           [Desmodus rotundus]
          Length = 1170

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 221/841 (26%), Positives = 364/841 (43%), Gaps = 85/841 (10%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTDVV---FDLSKRSILNDITLSCYAGGYPNPSYEWFKE 231
           ++    E P  +P+ P   KQ T +V   FD           + C A G P P + W K+
Sbjct: 20  EFATATEIPLSVPQVPTITKQSTVLVAFPFD-------EHFQVECEAKGNPEPQFTWTKD 72

Query: 232 DYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESV 288
           D   D         LSD R  +   SG   I N+      +G Y C ASN+ G+ +SE +
Sbjct: 73  DKPFD---------LSDPRVIVANNSGTFRIPNEGHVSHFQGRYRCFASNRLGAAMSEEI 123

Query: 289 QLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347
           +     I +F  ++   +  +     M  C PP   P ++ YW        +E+D+RV++
Sbjct: 124 EFIVPNIPKFPKEKIEPLEVEEGDPVMLSCKPPAGLPPLHIYWMNIEL-EHIEQDERVYM 182

Query: 348 SYDGALYFSALEQIDA-GNYSC--------------NVQSKVSDTGRNGPFFPLKVFPHS 392
           S  G LYF+ +E+ D+  +Y C               ++  V    RN      +    +
Sbjct: 183 SQKGDLYFANVEEKDSRSDYCCFAAFPRLRTIVQKMPMKLTVHSLKRNASGSSTEPGSQA 242

Query: 393 NFQQLKFPNNF---PKTFPEAPKA---GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
           N    + P       ++ PE P     GD + LEC A G P P   W + G  LP+    
Sbjct: 243 NSINQRMPRLLLPAAESGPEHPVTILRGDTLLLECFAEGLPTPQIEWKKMGGDLPKGRET 302

Query: 447 -ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQAD 505
            EN+ ++L I  V  ED+G Y C A+N   +      ++++  P +              
Sbjct: 303 KENYGKMLKIEKVSDEDRGRYRCTATNSLGSATHDFHVTVEEPPRWVKKPQSGVYSTGTS 362

Query: 506 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV----LTIRYLNPERDPA 561
           +   CEA G P  T  W  NG       LP+E+    F  D +    ++   L P    A
Sbjct: 363 VILLCEAEGEPKPTIRWRVNG-------LPIEENP--FAGDVIFPGEVSFTNLQPNHS-A 412

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNPEAAPKPKF 620
           +YQC A N   T  ++A + V+ + P  +    + E YA   G +V++ C+  A+P+   
Sbjct: 413 VYQCEASNAHGTILATANIDVIDISPLIQTD--DGEDYAAVVGSSVSLHCDFFASPQAVV 470

Query: 621 VWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
            W +   +    G R ++F+NG L +S  + +D+G Y+C   N  G       L +    
Sbjct: 471 SWLRVEELRPIEGPRYRVFDNGTLQVSRATEEDAGSYTCWVENAKGKTAVTASLDIRKAT 530

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINI 737
           +     P    +     L+LRC++  +  L   +   W+ +G     +  N  E   + +
Sbjct: 531 TVRVS-PENPRVPRSHTLELRCASRCDPHLGPSLTLAWSKDG---DALQTNGTEDGRVVL 586

Query: 738 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797
           DG  L I+N +  D G Y C  ++T+  ++ +T V V   P  P  +++ E    S  + 
Sbjct: 587 DGARLTISNVTPEDQGVYSCAARTTLDSVADETRVTVLDVPDPPENLRLSERQNRSVRLA 646

Query: 798 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
           W  G  +   IT Y +    +  +     +  V+  E          S+   L P+  Y 
Sbjct: 647 WDAGDDHNSNITEYVVEFEGDKEAPGRWATLTVVSGE--------GTSVLLPLAPYVRYR 698

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F+V+A NE+G   PS PS  + TP   P + P  I     +  ++ I WEPL   +QN P
Sbjct: 699 FRVVAVNEVGRSRPSRPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKPMEQNGP 758

Query: 918 NIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            + Y++ WR +    E++ ET++E+       +R+ +   Y  Y+V+VQA+N +G GPE 
Sbjct: 759 GLEYRVAWRPQGAPVEWEEETVREHS------LRVMTPAVYAPYDVQVQAVNRLGAGPEP 812

Query: 977 E 977
           +
Sbjct: 813 Q 813



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 142/602 (23%), Positives = 228/602 (37%), Gaps = 79/602 (13%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRAS 471
           G  V L C A G P P+  W   G P+  N +  +  F   ++  N++      Y C AS
Sbjct: 360 GTSVILLCEAEGEPKPTIRWRVNGLPIEENPFAGDVIFPGEVSFTNLQPNHSAVYQCEAS 419

Query: 472 NDRSALESSVTIS-IQAEPNFTIPLTDKHMDNQA----DLTWTCEAFGVPDVTYSWFRNG 526
           N    + ++  I  I   P   +  TD   D  A     ++  C+ F  P    SW R  
Sbjct: 420 NAHGTILATANIDVIDISP---LIQTDDGEDYAAVVGSSVSLHCDFFASPQAVVSWLRVE 476

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV---- 582
           EL      P+E   RY + DN         E D   Y C  +N       +A L +    
Sbjct: 477 ELR-----PIEGP-RYRVFDNGTLQVSRATEEDAGSYTCWVENAKGKTAVTASLDIRKAT 530

Query: 583 -LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR---RKIF 638
            + + P   + P  S T      +    C+P   P     W KDG+ + + G    R + 
Sbjct: 531 TVRVSPENPRVP-RSHTLELRCAS---RCDPHLGPSLTLAWSKDGDALQTNGTEDGRVVL 586

Query: 639 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
           +   L IS V+ +D G+YSC A         + R+ VL  P   E L  +++   +R+++
Sbjct: 587 DGARLTISNVTPEDQGVYSCAARTTLDSVADETRVTVLDVPDPPENL--RLSERQNRSVR 644

Query: 699 LRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
           L   A  +   ++  Y+    G +        L    ++ +G  + +  A +     +  
Sbjct: 645 LAWDAGDDHNSNITEYVVEFEGDKEAPGRWATLTV--VSGEGTSVLLPLAPYVRY-RFRV 701

Query: 758 VVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW---TDGATNGRPIT 809
           V  + VG+   ++ +   E PP  P      ++V         I+W        NG P  
Sbjct: 702 VAVNEVGRSRPSRPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKPMEQNG-PGL 760

Query: 810 HYKIIAR-----TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP--WSTYEFKVIA 862
            Y++  R       W      V EH +                 V+ P  ++ Y+ +V A
Sbjct: 761 EYRVAWRPQGAPVEWEEE--TVREHSL----------------RVMTPAVYAPYDVQVQA 802

Query: 863 GNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
            N LG G    P PQ  T     D P  AP   G        + ++W  +P+++ +    
Sbjct: 803 VNRLGAG----PEPQSVTLYSGEDYPDAAPVIQGVDVVNSTLVRVTWSSVPKDRVHGQLK 858

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPE 975
            Y++ W K           KE   +  A  R    +PS   ++E+ + V A N  G GPE
Sbjct: 859 GYQVTWWKTRSLLDGRPLPKEASVLRFAGQRGSGMLPSLEAFSEFRLTVLAYNSKGAGPE 918

Query: 976 SE 977
           SE
Sbjct: 919 SE 920


>gi|237858634|ref|NP_001153790.1| neurofascin isoform 4 precursor [Mus musculus]
          Length = 1157

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 227/812 (27%), Positives = 356/812 (43%), Gaps = 68/812 (8%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP N A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 319 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 375

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP---SFKKRP 593
            + +R    D ++        R  A+YQC   N+     ++A + VL + P   S + + 
Sbjct: 376 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQL 433

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSR 650
           +    Y        + C    +P P   W K+G   GS   GG   ++ENG+L I  + +
Sbjct: 434 IRVILY----NRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRK 487

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L 
Sbjct: 488 EDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLK 546

Query: 711 VAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           +   W  +   + IGN    E ++         L I   +  D G Y C+  + + +   
Sbjct: 547 LTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLA 597

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
           K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y +     +    F    
Sbjct: 598 KAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG- 652

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +  +  R+ G   +++ + L P+  Y+F+VIA NE+G   PS PS +Y T    P   
Sbjct: 653 --VWHDHSRFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESN 709

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           PS + G G +  ++ I+W P+       PN+ Y + WR++       ET + + NV +  
Sbjct: 710 PSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWG 762

Query: 949 VR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
            R  +     Y  YE++VQA ND G GPE + 
Sbjct: 763 SRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 794


>gi|348578153|ref|XP_003474848.1| PREDICTED: neurofascin isoform 3 [Cavia porcellus]
          Length = 1158

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 231/836 (27%), Positives = 358/836 (42%), Gaps = 71/836 (8%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH           G  IE P  + + P   KQ   D + D       ++I + C A G P
Sbjct: 10  LHTAFLLLLLLSLGSAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNP 64

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNK 279
            PS+ W +      R      DP    R     G L+I+     R  E  G Y C A NK
Sbjct: 65  APSFHWTR----NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNK 118

Query: 280 FGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           FG+ +S  ++L         + NL   P +  +     + C+PP   P    +W      
Sbjct: 119 FGTALSNRIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM- 175

Query: 337 NFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ 395
             + +DKRV   ++G LYFS  + Q    +YSCN +   + T +    F LKV       
Sbjct: 176 EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVA 235

Query: 396 QLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRI 452
           +      +P+    +     G  + LEC+A G P P   W ++G  LP + A FENFN+ 
Sbjct: 236 ERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKA 295

Query: 453 LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEA 512
           L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A
Sbjct: 296 LRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRA 355

Query: 513 FGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
            G P  T  W  NGE L S       +   D    +D  ++ R        A+YQC   N
Sbjct: 356 NGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSN 407

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 629
           +     ++A + VL + P     P              + C    +P P   W K+G   
Sbjct: 408 EHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ-- 464

Query: 630 GS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
           GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P
Sbjct: 465 GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIFRMP 523

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEI 744
               +     +QL C    +  L +   W  +   + IGN    E ++         L I
Sbjct: 524 EDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMKKEDDS---------LTI 574

Query: 745 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 804
              +  D G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N
Sbjct: 575 FGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDN 634

Query: 805 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
             PIT Y +     +    F      +  +  ++ G   +++   L P+  Y+F+VIA N
Sbjct: 635 NSPITDYIV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAIN 686

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
           E+G   PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + 
Sbjct: 687 EVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVK 746

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           WR++       ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 747 WRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 795


>gi|37360078|dbj|BAC98017.1| mKIAA0756 protein [Mus musculus]
          Length = 1251

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 227/812 (27%), Positives = 356/812 (43%), Gaps = 68/812 (8%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 122 PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 177

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 178 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 235

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 236 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 292

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 293 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDL 352

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP N A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 353 LLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 412

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 413 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 469

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP---SFKKRP 593
            + +R    D ++        R  A+YQC   N+     ++A + VL + P   S + + 
Sbjct: 470 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQL 527

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSR 650
           +    Y        + C    +P P   W K+G   GS   GG   ++ENG+L I  + +
Sbjct: 528 IRVILY----NRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRK 581

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L 
Sbjct: 582 EDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLK 640

Query: 711 VAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           +   W  +   + IGN    E ++         L I   +  D G Y C+  + + +   
Sbjct: 641 LTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLA 691

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
           K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y +     +    F    
Sbjct: 692 KAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG- 746

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +  +  R+ G   +++ + L P+  Y+F+VIA NE+G   PS PS +Y T    P   
Sbjct: 747 --VWHDHSRFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESN 803

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           PS + G G +  ++ I+W P+       PN+ Y + WR++       ET + + NV +  
Sbjct: 804 PSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWG 856

Query: 949 VR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
            R  +     Y  YE++VQA ND G GPE + 
Sbjct: 857 SRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 888


>gi|119611934|gb|EAW91528.1| hCG16415, isoform CRA_e [Homo sapiens]
          Length = 1124

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 226/808 (27%), Positives = 351/808 (43%), Gaps = 62/808 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +    +K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 130 PMDLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 185

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 186 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 243

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 244 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 300

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 301 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDL 360

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 361 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 420

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 421 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 477

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 478 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 534

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 535 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 592

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +  
Sbjct: 593 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTV 651

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + IGN    E ++         L I   +  D G Y CV  + + +   K  
Sbjct: 652 SWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAY 702

Query: 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 831
           + V G P  P  +++ ++ + S  + W  G  N  PIT Y +     +    F      +
Sbjct: 703 LTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---V 755

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
             +  +Y G   +++   L P+  Y+F+VIA NE+G   PS PS +Y T    P   P  
Sbjct: 756 WHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGD 814

Query: 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR- 950
           + G G +  ++ I+W P+       PN+ Y + WR++       ET + + NV +   R 
Sbjct: 815 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRY 867

Query: 951 -IPSEFYYTEYEVKVQAINDVGPGPESE 977
            +     Y  YE++VQA ND G GPE E
Sbjct: 868 VVGQTPVYVPYEIRVQAENDFGKGPEPE 895


>gi|338724586|ref|XP_001489278.3| PREDICTED: neurofascin [Equus caballus]
          Length = 1169

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 237/853 (27%), Positives = 370/853 (43%), Gaps = 94/853 (11%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           L  LL+  R  +  MD+  P      P   KQ   D + D       ++I + C A G P
Sbjct: 15  LLCLLSLGRAIEIPMDLSQP------PTITKQSVKDHIVDPR-----DNILIECEAKGNP 63

Query: 223 NPSYEWFKEDYVQDRLVANLIDP-LSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASN 278
            PS+ W +      R      DP +S KR +   G L+I+     R  E  G Y C A N
Sbjct: 64  APSFHWTR----NSRFFNIAKDPRVSMKRRS---GTLVIDFRSGGRPEEYEGEYQCFARN 116

Query: 279 KFGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF 335
           KFG+ +S  ++L         + NL   P +  +     + C+PP   P    +W     
Sbjct: 117 KFGTALSNRIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSTM 174

Query: 336 PNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PH 391
            + + +DKRV   ++G LYFS  + Q    +YSCN +   + T +    F LKV    PH
Sbjct: 175 -DPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTNHPH 233

Query: 392 SNFQQLKFPNNFPK----------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTR 435
           ++      P+ +             +P+   +      G  + LEC+A G P P   W +
Sbjct: 234 NDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYK 293

Query: 436 RGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIP 494
           +G  LP + A FENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +   
Sbjct: 294 KGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE 353

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554
             +  +    D    C A G P  T  W  NGE L S      + +R    D ++     
Sbjct: 354 PKNLILAPGEDGRLVCRASGNPKPTIQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQ 410

Query: 555 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
              R  A+YQC   N+     ++A + VL + P     P              + C    
Sbjct: 411 ISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFG 467

Query: 615 APKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 671
           +P P   W K+G   GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ 
Sbjct: 468 SPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIHKEDQGIYTCVATNILGKAENQV 525

Query: 672 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNE 729
           RL V   P+   ++P          +QL C    +  L +   W  +   + IGN    E
Sbjct: 526 RLEV-KDPTRIFRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKE 584

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 789
            ++         L I   +  D G Y CV  + + +   K  + V G P  P  +++ ++
Sbjct: 585 DDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDL 635

Query: 790 HKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            + S  + W  G  N  PIT Y +    +      W + S         ++ G   +++ 
Sbjct: 636 AERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAVL 686

Query: 848 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
             L P+  Y+F+VIA NE+G   PS PS +Y T    P   P+ + G G +  ++ I+W 
Sbjct: 687 Q-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWT 745

Query: 908 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQ 965
           P+       PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQ
Sbjct: 746 PMNATSAFGPNLRYIVKWRRR-------ETRESWNNVTVWGSRYVVGQTPVYVPYEIRVQ 798

Query: 966 AINDVGPGPESEV 978
           A ND G GPE + 
Sbjct: 799 AENDFGKGPEPDT 811


>gi|380810884|gb|AFE77317.1| neurofascin isoform 3 precursor [Macaca mulatta]
          Length = 1158

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 228/817 (27%), Positives = 353/817 (43%), Gaps = 79/817 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA------ 413
           Q    +YSCN +   + T +    F LKV   +     + P+     +P+   +      
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTSARGVAERTPSFM---YPQGTASSQMVLR 255

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASN 472
           G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN
Sbjct: 256 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASN 315

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
              ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S 
Sbjct: 316 KMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSA 375

Query: 533 TLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
                 +   D    +D  ++ R        A+YQC   N+     ++A + VL + P  
Sbjct: 376 PPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLANAFVSVLDVPPRM 427

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLIS 646
              P              + C    +P P   W K+G   GS   GG   ++ENG+L I 
Sbjct: 428 LS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIK 484

Query: 647 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
            + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +
Sbjct: 485 MIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHD 543

Query: 707 ELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 764
             L +   W  +   + IGN    E ++         L I   +  D G Y CV  + + 
Sbjct: 544 PSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELD 594

Query: 765 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NST 822
           +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y +    +      
Sbjct: 595 QDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGV 654

Query: 823 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
           W + S         +Y G   +++   L P+  Y+F+VIA NE+G   PS PS +Y T  
Sbjct: 655 WHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSG 704

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 942
             P   P  + G G +  ++ I+W P+       PN+ Y + WR++       ET + + 
Sbjct: 705 APPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWN 757

Query: 943 NVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
           NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 758 NVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 794



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 163/681 (23%), Positives = 263/681 (38%), Gaps = 107/681 (15%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 285 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 337

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 338 --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 393

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 394 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLD--CPFFG 451

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 452 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 504

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 505 -AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 562

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL  P     L  ++T  
Sbjct: 563 NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL--ELTDL 619

Query: 693 AHRNLQLRC-------------SAHTEELLDVAYIWTHNGVRIGNMDLNELE-TPNINID 738
           A R+++L                   EE      +W  +    G+++   L  +P +N  
Sbjct: 620 AERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQ 679

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKTSATIQ 797
             ++ +              V S+   + ++       PP   PG V+     K +  I 
Sbjct: 680 FRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 727

Query: 798 WT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           WT  +  +   P   Y +       R  WN+     S +V+G+               V 
Sbjct: 728 WTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP-------------VY 774

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL- 909
           VP   YE +V A N+ G G P   S    +  D P  AP+ +         +S+ W  + 
Sbjct: 775 VP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVY 830

Query: 910 PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           P   Q     Y   +WR            K+    F  + L+     G+ V R+   F Y
Sbjct: 831 PDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL---FPY 881

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + Y++++  +N  G GP SE 
Sbjct: 882 SNYKLEMVVVNGRGDGPRSET 902


>gi|119611932|gb|EAW91526.1| hCG16415, isoform CRA_c [Homo sapiens]
          Length = 1127

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 227/813 (27%), Positives = 353/813 (43%), Gaps = 62/813 (7%)

Query: 185 KIPRGPYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           +IP     + QP  +    +K  I++   +I + C A G P PS+ W +      R    
Sbjct: 128 EIPMDRESLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNI 183

Query: 242 LIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FI 295
             DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L        
Sbjct: 184 AKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLW 241

Query: 296 GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355
            + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G LYF
Sbjct: 242 PKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYF 298

Query: 356 S-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA- 413
           S  + Q    +YSCN +   + T +    F LKV       +      +P+    +    
Sbjct: 299 SNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVL 358

Query: 414 -GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRAS 471
            G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C AS
Sbjct: 359 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS 418

Query: 472 NDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
           N   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S
Sbjct: 419 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS 478

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                 + +R    D ++        R  A+YQC   N+     ++A + VL + P    
Sbjct: 479 AP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS 533

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPV 648
            P              + C    +P P   W K+G   GS   GG   ++ENG+L I  +
Sbjct: 534 -PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMI 590

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
            ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  
Sbjct: 591 RKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPS 649

Query: 709 LDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
           L +   W  +   + IGN    E ++         L I   +  D G Y CV  + + + 
Sbjct: 650 LKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQD 700

Query: 767 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
             K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y +     +    F  
Sbjct: 701 LAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQP 756

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
               +  +  +Y G   +++   L P+  Y+F+VIA NE+G   PS PS +Y T    P 
Sbjct: 757 G---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPE 812

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946
             P  + G G +  ++ I+W P+       PN+ Y + WR++       ET + + NV +
Sbjct: 813 SNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTV 865

Query: 947 AVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
              R  +     Y  YE++VQA ND G GPE E
Sbjct: 866 WGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 898


>gi|354483119|ref|XP_003503742.1| PREDICTED: neural cell adhesion molecule L1-like protein
           [Cricetulus griseus]
          Length = 1206

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 226/786 (28%), Positives = 344/786 (43%), Gaps = 68/786 (8%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQVEDRG 270
           + C A G P P + W K+D   D         LSD R  +S   G   I N+      +G
Sbjct: 52  IECEAKGNPEPKFSWTKDDKHFD---------LSDPRIIVSNNSGTFKIPNEGHISHFQG 102

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYY 329
            Y C ASN+ G+ ISE ++     + +F  ++   +  +     +  C+PP   P ++ Y
Sbjct: 103 KYRCFASNRLGTAISEEIEFIVPGVPKFPKEKIEPMDVEEGDSIVLPCNPPKGLPPLHIY 162

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPFFPLK 387
           W        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  K+    +  P   L 
Sbjct: 163 WMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPKLRTIVQKMPM-KLT 220

Query: 388 VFPHSNFQQLKFPNNFPKTF-PEAPKA---------GDKVRLECVAFGYPVPSYNWTRRG 437
           V   +  +Q K     PK   P A +          G+ + LEC A G P P   W++ G
Sbjct: 221 VNSSNLIKQRK-----PKLLLPPAQRGSSSTMTVLKGETLLLECFAEGLPTPQVEWSKPG 275

Query: 438 SPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
           S LP+     EN+ + L I N+   D+G Y C ASN          I +Q  P +     
Sbjct: 276 SELPKGRETKENYGKTLKIENISYHDKGNYRCTASNLLGKASHDFHIIVQEPPRWKKKPQ 335

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
                  +     CEA G P  T  W  NG  + +   P    D  F ++  ++   L P
Sbjct: 336 SAVYSTGSSGILLCEAEGEPQPTIKWRVNGFPIENHPFP---GDVMFTRE--ISFTNLQP 390

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAA 615
               A+YQC A N   T  +SA + V+ + P  K +    E YA   G +  + C   A+
Sbjct: 391 NHT-AVYQCEASNIHGTILASANIDVVDVVPLIKTK--NEENYATVLGYSAFLHCEYFAS 447

Query: 616 PKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           PK   +W+  D      G R    ENG L I   + +D+G YSC   N  G       L 
Sbjct: 448 PKATVIWEVADEAHPLEGSRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLD 507

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--VAYIWTHNGVRIGNMDLNELET 732
           + +  +  +  P    I     L+L C +  +  L   +   W+ +G      D+N  E 
Sbjct: 508 IRNA-TKLKVSPKNPRIPKSHMLELHCESQCDSHLKHTLKLSWSKDG---ETFDINGTED 563

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 792
             I IDG  L I+N S  D G Y C  ++ +  IS KT V V G P  PG + + E    
Sbjct: 564 GRIVIDGANLTISNISVEDQGIYSCSAQTALDSISEKTQVTVLGVPDPPGSLLLSERQNR 623

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           S  + W  G  +   I+ Y I    N      W         +E+ R  G +  ++ + L
Sbjct: 624 SVRLSWEAGDDHNSNISEYIIEFEGNREEPGKW---------QELTRIPGEETEAVLS-L 673

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y+F+VIA NE+G   PS PS  + TP   P + P  I     +  ++ I WEPL 
Sbjct: 674 APYVRYQFRVIAVNEVGRSYPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLK 733

Query: 911 REKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
             +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+V+VQAIN 
Sbjct: 734 SMEQNGPGLEYRVSWKPQGAPEEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINQ 787

Query: 970 VGPGPE 975
           +G GPE
Sbjct: 788 LGSGPE 793



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 148/598 (24%), Positives = 226/598 (37%), Gaps = 79/598 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   G P+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 347 LLCEAEGEPQPTIKWRVNGFPIENHPFPGDVMFTREISFTNLQPNHTAVYQCEASNIHGT 406

Query: 477 LESSVTISIQAEPNFTIPLTD-KHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLN 530
           + +S  I +       +PL   K+ +N A +        CE F  P  T  W      + 
Sbjct: 407 ILASANIDVVD----VVPLIKTKNEENYATVLGYSAFLHCEYFASPKATVIW-----EVA 457

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTL 585
            E  PLE   RY   +N     Y   E D   Y C   N +     +A L +     L +
Sbjct: 458 DEAHPLEG-SRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNATKLKV 516

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGN 642
            P   K P   +++  E  +    C+       K  W KDG   +I G+   R + +  N
Sbjct: 517 SP---KNPRIPKSHMLEL-HCESQCDSHLKHTLKLSWSKDGETFDINGTEDGRIVIDGAN 572

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L IS +S +D GIYSC+A         K ++ VL  P      P  + ++  +N  +R S
Sbjct: 573 LTISNISVEDQGIYSCSAQTALDSISEKTQVTVLGVPD----PPGSLLLSERQNRSVRLS 628

Query: 703 -----AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG---- 753
                 H   + +  YI    G R       EL      I G   E T A  + A     
Sbjct: 629 WEAGDDHNSNISE--YIIEFEGNREEPGKWQEL----TRIPG---EETEAVLSLAPYVRY 679

Query: 754 EYECVVKSTVGK-ISTKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGR 806
           ++  +  + VG+   ++ +   E PP  P      ++V         I+W          
Sbjct: 680 QFRVIAVNEVGRSYPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNG 739

Query: 807 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP--WSTYEFKVIAGN 864
           P   Y    R +W        E    + V  +T R       V+ P  ++ Y+ +V A N
Sbjct: 740 PGLEY----RVSWKPQ--GAPEEWEEETVTNHTLR-------VMTPTVYAPYDVQVQAIN 786

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
           +LG G    P   Y+   D P  AP   G        + ++W  +P+E  +     Y+I 
Sbjct: 787 QLGSGPEPQPVTLYSG-EDYPSTAPVIHGVDVMNSTLVKVTWSSIPKETVHGLLRGYQIN 845

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           W K           KE   +  +  R    +PS   ++EY + V A N  G GPESE 
Sbjct: 846 WWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEYHLTVLAYNSKGAGPESEA 903



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 125/330 (37%), Gaps = 33/330 (10%)

Query: 418 RLECVAFGYPVPSYNWTRRGSPL----PRNAYFENFNRILTIPNVK--VEDQGEYICRAS 471
           ++EC A G P P ++WT+         PR     N +    IPN       QG+Y C AS
Sbjct: 51  QIECEAKGNPEPKFSWTKDDKHFDLSDPR-IIVSNNSGTFKIPNEGHISHFQGKYRCFAS 109

Query: 472 NDR-SALESSVTISIQAEPNFTIPLTDKHMDNQAD-LTWTCEA-FGVPDVTYSWFRNGEL 528
           N   +A+   +   +   P F     +     + D +   C    G+P +   W  N EL
Sbjct: 110 NRLGTAISEEIEFIVPGVPKFPKEKIEPMDVEEGDSIVLPCNPPKGLPPLHIYWM-NIEL 168

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA----------KNQLKTRYSSA 578
            + E    +D+  Y  Q   L    +  +     Y C A          K  +K   +S+
Sbjct: 169 EHIE----QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPKLRTIVQKMPMKLTVNSS 224

Query: 579 QLRVLTLKPSF----KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR 634
            L +   KP       +R   S     +G  + + C  E  P P+  W K G+ +  G  
Sbjct: 225 NL-IKQRKPKLLLPPAQRGSSSTMTVLKGETLLLECFAEGLPTPQVEWSKPGSELPKGRE 283

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
            K      L I  +S  D G Y CTA+N+ G   S    I++  P  +++ P     +  
Sbjct: 284 TKENYGKTLKIENISYHDKGNYRCTASNLLG-KASHDFHIIVQEPPRWKKKPQSAVYSTG 342

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
            +  L C A  E    +   W  NG  I N
Sbjct: 343 SSGILLCEAEGEPQPTIK--WRVNGFPIEN 370


>gi|195568165|ref|XP_002102088.1| GD19722 [Drosophila simulans]
 gi|194198015|gb|EDX11591.1| GD19722 [Drosophila simulans]
          Length = 515

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 124/220 (56%), Positives = 157/220 (71%), Gaps = 4/220 (1%)

Query: 128 RDYLAYSFSQSLKRWGFERVTGMEPLLFICEASI----QKLHYLLNDDRTYQYGMDIENP 183
           RD + Y+FS+   RW F     +E  LFICE+ +      ++  L+D R Y YG+DI + 
Sbjct: 296 RDRVVYAFSKKRDRWMFMPAYEIELNLFICESKVLYSSDNVNIKLDDKRPYHYGLDINDM 355

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           ++IPRGPYF+KQP D  FD++K  ++ND+TLSC A GYP PSY W++E YV DRL    I
Sbjct: 356 ERIPRGPYFVKQPNDTTFDVNKNRLINDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKI 415

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           DPL+  R+T+SGGNLII +P+Q  D+G+YHC A NKFG I SES  L FGFI EFNLKR+
Sbjct: 416 DPLAQDRYTISGGNLIIYEPKQALDQGAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRS 475

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343
            E    NWGK++FCDPP +YP V YYWARDYFPNFVEED+
Sbjct: 476 AETSEMNWGKSIFCDPPQHYPDVRYYWARDYFPNFVEEDR 515



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 60/90 (66%)

Query: 29  CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQR 88
           CP+HWV +R +CYRF++SP +   +AK  CK+ ++DL NV++ ++H FI+  L  Q+ ++
Sbjct: 139 CPEHWVSFRQTCYRFIRSPKRNWAEAKKICKAYNADLINVDNVEKHSFILKNLILQNQRQ 198

Query: 89  RKWYFGGTQQSPNLWVNEDGTNLNELDAAF 118
            +++    Q  P  WVN+D T L +++ +F
Sbjct: 199 NRFFISARQTGPLNWVNDDNTQLVQIEDSF 228



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 10/127 (7%)

Query: 505 DLTWTCEAFGVPDVTYSWFRN---GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
           D+T +C A G P  +Y+W+R     + L  + +    QDRY I    L I       D  
Sbjct: 383 DVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQG 442

Query: 562 MYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 618
            Y C A+N+  + R  SA L     ++ + K+    SE   G+    +IFC+ P+  P  
Sbjct: 443 AYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPDV 498

Query: 619 KFVWKKD 625
           ++ W +D
Sbjct: 499 RYYWARD 505



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 19/127 (14%)

Query: 415 DKVRLECVAFGYPVPSYNWTR-----------RGSPLPRNAYFENFNRILTIPNVKVEDQ 463
           + V L C+A GYP PSY W R           +  PL ++ Y  +   ++     +  DQ
Sbjct: 382 NDVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQ 441

Query: 464 GEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF-----GVPDV 518
           G Y C A N    + S    S      F +    K     +++ W    F       PDV
Sbjct: 442 GAYHCVAENKFGRIRSE---SAHLNFGFIMEFNLKRSAETSEMNWGKSIFCDPPQHYPDV 498

Query: 519 TYSWFRN 525
            Y W R+
Sbjct: 499 RYYWARD 505


>gi|383863731|ref|XP_003707333.1| PREDICTED: neuroglian-like [Megachile rotundata]
          Length = 1251

 Score =  269 bits (688), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 232/816 (28%), Positives = 362/816 (44%), Gaps = 57/816 (6%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPTD-VVFDLSKRSI-LND--ITLSCYAGGYPNPSYEWFK 230
           Q    I++P +I + P     PTD  +F +++  I  ND    + C A G P P Y W K
Sbjct: 14  QTSAIIQSPPRISKQP-----PTDEQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIK 68

Query: 231 EDYVQDRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESV 288
                     N   P  D R +     G L+I+ PR  ED G Y C A N++G+  S SV
Sbjct: 69  NG-------KNFEWPAYDDRISQQPGRGTLVISRPRD-EDLGQYQCFAENEWGTATSNSV 120

Query: 289 QLAFGFIGEFNLKRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRV 345
            +    +  F  +    +  N+     + C PP  +P  N YW        ++   + R+
Sbjct: 121 FVRKAELNSFKDENPISLDANEGQPFKLTCQPPDGWPKPNVYWMIQNIAGSIKSINNSRM 180

Query: 346 FVSYDGALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPH--SNFQQLKFP 400
            +  +G L+FS + + DA +   Y+C   S   +  + G    L V     S  Q    P
Sbjct: 181 TLDPEGNLWFSNVTRYDASDDFYYACAATSLYRNEYKIGNRVLLHVISSGTSASQNKHEP 240

Query: 401 -NNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPN 457
              +     E    G+K+ L C+  G P+P   W++ G P+  N      N+ + L I +
Sbjct: 241 VKQYVSRKNEVALRGNKIELYCIYGGTPLPQIVWSKNGQPIKTNDRITQGNYGKSLIIKH 300

Query: 458 VKVEDQGEYICRASNDRS-ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           V  +D+G Y C ASN    A  +S+ + + A P FTI     +      + + C A GVP
Sbjct: 301 VNFKDEGTYTCEASNGVGDAKSNSINLQVMAVPFFTIEPEIINAAEDETVEFKCAASGVP 360

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
                W  NG+ + SE  P     R  +  N + I  L  ++D   Y C A N L   Y 
Sbjct: 361 TPEIKWIHNGKPI-SEAPP---NPRRKVTANSIIIEKLT-KKDTGNYGCNATNSLGYVYK 415

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
              + VL L+P   + P +  T   +G  V I C    APKP   W + G  + +GGR K
Sbjct: 416 DVYVNVLALEPEIIQPPADMATV--DGKTVRITCRVFGAPKPAVKWIRKGQEL-TGGRYK 472

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
             ++G+L I  V   D+G+Y+C A+N  G  E+ G L+V       ++ P    +AA   
Sbjct: 473 TLDSGDLEIENVIFLDAGVYTCHASNKFGEVEATGNLVVKEHTRITDE-PEDYEVAAGST 531

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
              RC+A T+  L +   W  NG  I   D  E+E   I      L IT  +  D+G Y 
Sbjct: 532 ATFRCNAVTDSSLTLTIDWLSNGKPI---DF-EMEPRFIRSTDYSLMITKTTELDSGTYT 587

Query: 757 CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
           CV ++ + +   + T+IV+  P  P  +  V+  +  A++ WT    N   I  Y I   
Sbjct: 588 CVARTELDETKAQATLIVQDVPN-PPKLLSVKCMENEASVHWTPMGDNRASILRYTIQYN 646

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
           T +    + +S+  +      Y           + PW+ Y F+V+A N++G   PS  S 
Sbjct: 647 TTFTPDTWEISKDAVPATEQTYVVP--------MSPWANYTFRVLAWNKIGPSLPSPHSD 698

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQS 935
              T  D PY+ P  + G G    +L ISW  +P+ + NAP   Y++++R+    E +  
Sbjct: 699 VCTTLPDVPYKNPDNVAGKGTTPQNLVISWTAMPQIEHNAPKFMYRVYYRRDIPGEKWTI 758

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           E ++++    + V   P+   Y  Y++KV AIN  G
Sbjct: 759 EDIQDWKKNSLVVDNQPT---YQRYKIKVVAINARG 791


>gi|189242457|ref|XP_970217.2| PREDICTED: similar to AGAP000720-PA [Tribolium castaneum]
          Length = 1259

 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 231/801 (28%), Positives = 358/801 (44%), Gaps = 53/801 (6%)

Query: 190 PYFIKQP--TDVVFDL-SKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           PY +KQP   +V+F + S         + C A G P P Y W K    +        D +
Sbjct: 28  PYIVKQPPTDEVLFQVESGGETDKPFYIECEAIGEPAPKYRWVKNG--KPFHWQTYDDRI 85

Query: 247 SDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEI 306
           S ++     G L I+ P  V D G Y C A N+ G   S SV +    +  F   +   +
Sbjct: 86  SQQQ---GRGTLSISKPTDV-DLGQYQCFAENEHGVATSNSVFMRKAELNSFKTTQPISL 141

Query: 307 -GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE--EDKRVFVSYDGALYFSALEQIDA 363
            G++     + C+PP  +P    +W   Y     +     R+ +  +G L+FS L + D 
Sbjct: 142 SGDEGEPFKLTCEPPDGWPKPIVHWIYLYTNGGFKTINSSRMTIDPEGNLWFSNLTRDDV 201

Query: 364 GN---YSCNVQSKVSDTGRNGPFFPLKVF-----PHSNFQQLKFPNNFPKTFPEAPKAGD 415
            +   Y+C   S      + G    L V        SN ++      +          G 
Sbjct: 202 TDNFKYACAATSPFKHEYKYGNSVLLNVVSTGVSAASNKREPVL--QYVSRKNTVAYLGK 259

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRNAYF--ENFNRILTIPNVKVEDQGEYICRASND 473
           + +L C+  G P+P   W + G P+  +     +N+ + L I  V  ED+G+Y C  SN 
Sbjct: 260 QQKLYCIFGGTPLPQTVWYKDGKPIQSSDRITQDNYGKSLVIRVVNFEDEGKYTCEVSNG 319

Query: 474 RSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
               +S S+ + + A P F      ++      + + CEA GVP     W  NG+ + SE
Sbjct: 320 VGEAKSYSIDLKVFAIPYFIAEPERQNAAEGETVEFRCEAGGVPKPEIKWIHNGKPI-SE 378

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
             P     R  +++N + I  L  E D   Y C A N L   Y    + VL+L P   + 
Sbjct: 379 APP---NPRRRVENNRIVIERL-VESDTGNYGCNATNSLGYVYKDVYVNVLSLAPEILEA 434

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDD 652
           P  ++T A +G NVT+ C    APKP   W  +   + +GGR  +  NG+L+I  V  DD
Sbjct: 435 P--TDTQAVDGQNVTMICKVLGAPKPSIKWSLNEREL-TGGRYIVQPNGDLIIRNVQFDD 491

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
            G Y+C A N  G   +K  L+V    +Y    P    +AAH +   RC+A +++ LD+ 
Sbjct: 492 RGNYTCFAENKFGNASAKAALLV-KSHTYITDGPEDYEVAAHTSATFRCNAVSDDSLDLE 550

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
            IW  N   I   DL E E   +      L IT     D+G Y CV ++ + + S K  +
Sbjct: 551 IIWLKNDQPI---DLEE-EPRFVRSSDYSLTITQTIELDSGTYTCVARTALDEASAKAQL 606

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVI 831
           IV+  P  P  ++ VE H   ATI+W     N  PI+HY I   T +   TW     +V 
Sbjct: 607 IVQDVPN-PPSMEGVECHAKDATIRWKSMGDNRAPISHYIIEYNTTFTPETWTAAYNNVP 665

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
             ++         S    + PW+ Y F+VIA N++G   PS+ S    T  D PY+ P  
Sbjct: 666 ATDM---------SYNVPMSPWTNYTFRVIAVNKIGKSLPSTHSDVCTTEPDVPYKNPDD 716

Query: 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVR 950
           + G G +  +L ISW P+P+ + NA    Y+++WR+    E ++S  + ++      V  
Sbjct: 717 VKGEGDRPDNLIISWTPMPKIEHNADKFQYRVYWRRDIPGERYESRDITDWRVKQFVVDN 776

Query: 951 IPSEFYYTEYEVKVQAINDVG 971
            P+   + +Y +KV A+N+ G
Sbjct: 777 QPT---FQQYRIKVVAMNEKG 794


>gi|354478081|ref|XP_003501244.1| PREDICTED: neurofascin isoform 2 [Cricetulus griseus]
          Length = 1157

 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 225/811 (27%), Positives = 352/811 (43%), Gaps = 66/811 (8%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVSERTPSFMYPQGTSSSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP +   FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSDKTKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 319 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 375

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 376 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 432

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 433 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 490

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P    +     +QL C    +  L +  
Sbjct: 491 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTV 549

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + IGN    E ++         L I   +  D G Y C+  + + +   K  
Sbjct: 550 SWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAY 600

Query: 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEH 829
           + V G P  P  +++ ++ + S  + W  G  N  PIT Y I    +      W + S  
Sbjct: 601 LTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVIQFEEDQFQPGVWHDHS-- 658

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
                  ++ G   +++ + L P+  Y+F+VIA NE+G   PS PS +Y T    P   P
Sbjct: 659 -------KFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 710

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
           S + G G +  ++ I+W P+       PN+ Y + WR++       ET + + NV +   
Sbjct: 711 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 763

Query: 950 R--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           R  +     Y  YE++VQA ND G GPE + 
Sbjct: 764 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 794


>gi|348578157|ref|XP_003474850.1| PREDICTED: neurofascin isoform 5 [Cavia porcellus]
          Length = 1170

 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 234/855 (27%), Positives = 364/855 (42%), Gaps = 92/855 (10%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH           G  IE P  + + P   KQ   D + D       ++I + C A G P
Sbjct: 10  LHTAFLLLLLLSLGSAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNP 64

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNK 279
            PS+ W +      R      DP    R     G L+I+     R  E  G Y C A NK
Sbjct: 65  APSFHWTR----NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNK 118

Query: 280 FGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           FG+ +S  ++L         + NL   P +  +     + C+PP   P    +W      
Sbjct: 119 FGTALSNRIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM- 175

Query: 337 NFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHS 392
             + +DKRV   ++G LYFS  + Q    +YSCN +   + T +    F LKV    P++
Sbjct: 176 EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 235

Query: 393 NFQQLKFPNNFPK----------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRR 436
           +      P+ +             +P+   +      G  + LEC+A G P P   W ++
Sbjct: 236 DSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKK 295

Query: 437 GSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
           G  LP + A FENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +    
Sbjct: 296 GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP 355

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIR 552
            +  +    D    C A G P  T  W  NGE L S       +   D    +D  ++ R
Sbjct: 356 KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR 415

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
                   A+YQC   N+     ++A + VL + P     P              + C  
Sbjct: 416 --------AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPF 466

Query: 613 EAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K+G   GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E+
Sbjct: 467 FGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN 524

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDL 727
           + RL V   P+   ++P    +     +QL C    +  L +   W  +   + IGN   
Sbjct: 525 QVRLEV-KDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMK 583

Query: 728 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
            E ++         L I   +  D G Y CV  + + +   K  + V G P  P  +++ 
Sbjct: 584 KEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDLELT 634

Query: 788 EVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEAS 845
           ++ + S  + W  G  N  PIT Y +    +      W + S         ++ G   ++
Sbjct: 635 DLAERSVRLTWIPGDDNNSPITDYIVQFEEDQFQPGVWHDHS---------KFPGSVNSA 685

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
           +   L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+
Sbjct: 686 VLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 744

Query: 906 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 963
           W P+       PN+ Y + WR++       ET + + NV +   R  +     Y  YE++
Sbjct: 745 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 797

Query: 964 VQAINDVGPGPESEV 978
           VQA ND G GPE + 
Sbjct: 798 VQAENDFGKGPEPDT 812


>gi|348578151|ref|XP_003474847.1| PREDICTED: neurofascin isoform 2 [Cavia porcellus]
          Length = 1175

 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 234/855 (27%), Positives = 364/855 (42%), Gaps = 92/855 (10%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH           G  IE P  + + P   KQ   D + D       ++I + C A G P
Sbjct: 10  LHTAFLLLLLLSLGSAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNP 64

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNK 279
            PS+ W +      R      DP    R     G L+I+     R  E  G Y C A NK
Sbjct: 65  APSFHWTR----NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNK 118

Query: 280 FGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           FG+ +S  ++L         + NL   P +  +     + C+PP   P    +W      
Sbjct: 119 FGTALSNRIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM- 175

Query: 337 NFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHS 392
             + +DKRV   ++G LYFS  + Q    +YSCN +   + T +    F LKV    P++
Sbjct: 176 EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 235

Query: 393 NFQQLKFPNNFPK----------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRR 436
           +      P+ +             +P+   +      G  + LEC+A G P P   W ++
Sbjct: 236 DSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKK 295

Query: 437 GSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
           G  LP + A FENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +    
Sbjct: 296 GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP 355

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIR 552
            +  +    D    C A G P  T  W  NGE L S       +   D    +D  ++ R
Sbjct: 356 KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR 415

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
                   A+YQC   N+     ++A + VL + P     P              + C  
Sbjct: 416 --------AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPF 466

Query: 613 EAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K+G   GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E+
Sbjct: 467 FGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN 524

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDL 727
           + RL V   P+   ++P    +     +QL C    +  L +   W  +   + IGN   
Sbjct: 525 QVRLEV-KDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMK 583

Query: 728 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
            E ++         L I   +  D G Y CV  + + +   K  + V G P  P  +++ 
Sbjct: 584 KEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDLELT 634

Query: 788 EVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEAS 845
           ++ + S  + W  G  N  PIT Y +    +      W + S         ++ G   ++
Sbjct: 635 DLAERSVRLTWIPGDDNNSPITDYIVQFEEDQFQPGVWHDHS---------KFPGSVNSA 685

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
           +   L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+
Sbjct: 686 VLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 744

Query: 906 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 963
           W P+       PN+ Y + WR++       ET + + NV +   R  +     Y  YE++
Sbjct: 745 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 797

Query: 964 VQAINDVGPGPESEV 978
           VQA ND G GPE + 
Sbjct: 798 VQAENDFGKGPEPDT 812


>gi|237858679|ref|NP_001153804.1| neurofascin isoform 3 precursor [Homo sapiens]
          Length = 1174

 Score =  268 bits (686), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 228/828 (27%), Positives = 357/828 (43%), Gaps = 85/828 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +    +K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDY 657

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G   P
Sbjct: 658 VV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHP 709

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++   
Sbjct: 710 SLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR--- 766

Query: 932 EFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
               ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 767 ----ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 810


>gi|71891758|dbj|BAA34476.3| KIAA0756 protein [Homo sapiens]
          Length = 1222

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 228/828 (27%), Positives = 357/828 (43%), Gaps = 85/828 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +    +K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 81  PMDLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 136

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 137 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 194

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 195 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 251

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 252 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 311

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 312 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 371

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 372 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 431

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 432 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 483

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 484 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 540

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 541 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARR 599

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 600 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 650

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 651 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDY 710

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G   P
Sbjct: 711 VV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHP 762

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++   
Sbjct: 763 SLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR--- 819

Query: 932 EFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
               ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 820 ----ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 863


>gi|270016380|gb|EFA12826.1| neuroglian [Tribolium castaneum]
          Length = 1267

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 231/801 (28%), Positives = 358/801 (44%), Gaps = 53/801 (6%)

Query: 190 PYFIKQP--TDVVFDL-SKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           PY +KQP   +V+F + S         + C A G P P Y W K    +        D +
Sbjct: 28  PYIVKQPPTDEVLFQVESGGETDKPFYIECEAIGEPAPKYRWVKNG--KPFHWQTYDDRI 85

Query: 247 SDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEI 306
           S ++     G L I+ P  V D G Y C A N+ G   S SV +    +  F   +   +
Sbjct: 86  SQQQ---GRGTLSISKPTDV-DLGQYQCFAENEHGVATSNSVFMRKAELNSFKTTQPISL 141

Query: 307 -GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE--EDKRVFVSYDGALYFSALEQIDA 363
            G++     + C+PP  +P    +W   Y     +     R+ +  +G L+FS L + D 
Sbjct: 142 SGDEGEPFKLTCEPPDGWPKPIVHWIYLYTNGGFKTINSSRMTIDPEGNLWFSNLTRDDV 201

Query: 364 GN---YSCNVQSKVSDTGRNGPFFPLKVF-----PHSNFQQLKFPNNFPKTFPEAPKAGD 415
            +   Y+C   S      + G    L V        SN ++      +          G 
Sbjct: 202 TDNFKYACAATSPFKHEYKYGNSVLLNVVSTGVSAASNKREPVL--QYVSRKNTVAYLGK 259

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRNAYF--ENFNRILTIPNVKVEDQGEYICRASND 473
           + +L C+  G P+P   W + G P+  +     +N+ + L I  V  ED+G+Y C  SN 
Sbjct: 260 QQKLYCIFGGTPLPQTVWYKDGKPIQSSDRITQDNYGKSLVIRVVNFEDEGKYTCEVSNG 319

Query: 474 RSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
               +S S+ + + A P F      ++      + + CEA GVP     W  NG+ + SE
Sbjct: 320 VGEAKSYSIDLKVFAIPYFIAEPERQNAAEGETVEFRCEAGGVPKPEIKWIHNGKPI-SE 378

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
             P     R  +++N + I  L  E D   Y C A N L   Y    + VL+L P   + 
Sbjct: 379 APP---NPRRRVENNRIVIERL-VESDTGNYGCNATNSLGYVYKDVYVNVLSLAPEILEA 434

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDD 652
           P  ++T A +G NVT+ C    APKP   W  +   + +GGR  +  NG+L+I  V  DD
Sbjct: 435 P--TDTQAVDGQNVTMICKVLGAPKPSIKWSLNEREL-TGGRYIVQPNGDLIIRNVQFDD 491

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
            G Y+C A N  G   +K  L+V    +Y    P    +AAH +   RC+A +++ LD+ 
Sbjct: 492 RGNYTCFAENKFGNASAKAALLV-KSHTYITDGPEDYEVAAHTSATFRCNAVSDDSLDLE 550

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
            IW  N   I   DL E E   +      L IT     D+G Y CV ++ + + S K  +
Sbjct: 551 IIWLKNDQPI---DLEE-EPRFVRSSDYSLTITQTIELDSGTYTCVARTALDEASAKAQL 606

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVI 831
           IV+  P  P  ++ VE H   ATI+W     N  PI+HY I   T +   TW     +V 
Sbjct: 607 IVQDVPN-PPSMEGVECHAKDATIRWKSMGDNRAPISHYIIEYNTTFTPETWTAAYNNVP 665

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
             ++         S    + PW+ Y F+VIA N++G   PS+ S    T  D PY+ P  
Sbjct: 666 ATDM---------SYNVPMSPWTNYTFRVIAVNKIGKSLPSTHSDVCTTEPDVPYKNPDD 716

Query: 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVR 950
           + G G +  +L ISW P+P+ + NA    Y+++WR+    E ++S  + ++      V  
Sbjct: 717 VKGEGDRPDNLIISWTPMPKIEHNADKFQYRVYWRRDIPGERYESRDITDWRVKQFVVDN 776

Query: 951 IPSEFYYTEYEVKVQAINDVG 971
            P+   + +Y +KV A+N+ G
Sbjct: 777 QPT---FQQYRIKVVAMNEKG 794


>gi|89903008|ref|NP_055905.2| neurofascin isoform 4 precursor [Homo sapiens]
 gi|168273078|dbj|BAG10378.1| neurofascin precursor [synthetic construct]
 gi|187952493|gb|AAI37014.1| Neurofascin homolog (chicken) [Homo sapiens]
          Length = 1169

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 229/830 (27%), Positives = 357/830 (43%), Gaps = 89/830 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +    +K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDY 657

Query: 812 KIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+G  
Sbjct: 658 VVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSS 707

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++ 
Sbjct: 708 HPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR- 766

Query: 930 DTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                 ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 767 ------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 810


>gi|380025831|ref|XP_003696667.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Apis florea]
          Length = 1251

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 235/811 (28%), Positives = 358/811 (44%), Gaps = 57/811 (7%)

Query: 180 IENPDKIPRGPYFIKQPTD-VVFDLSKRSI-LND--ITLSCYAGGYPNPSYEWFKEDYVQ 235
           I++P +I + P     PTD  +F +++  I  ND    + C A G P P Y W K     
Sbjct: 19  IQSPPRISKQP-----PTDEQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNG--- 70

Query: 236 DRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                N   P  D R +     G L+I+ PR  ED G Y C A N++G   S SV +   
Sbjct: 71  ----KNFEWPAYDDRISQQPGRGTLVISRPRD-EDLGQYQCFAENEWGIATSNSVFVRKA 125

Query: 294 FIGEFNLKRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYD 350
            +  F  +    +  N+     + C PP  +P  N YW        ++   + R+ +  +
Sbjct: 126 ELNSFKDQNPISLDANEGQPFKLTCQPPDGFPKPNVYWLIQDTAGGIKSINNSRMTLDPE 185

Query: 351 GALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPH--SNFQQLKFP-NNFP 404
           G L+FS + + DA +   Y+C   S   +  + G    L V     S  Q    P   + 
Sbjct: 186 GNLWFSNVTRNDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKHDPVKQYV 245

Query: 405 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVED 462
               E    G K+ L C+  G P+P   W++ G  +  N      N+ + L I +V  +D
Sbjct: 246 SRKNEVALRGKKIELYCIYGGTPLPQIVWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKD 305

Query: 463 QGEYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
           +G Y C ASN     +S S+ + + A P FTI     +      + + CEA GVP     
Sbjct: 306 EGTYTCEASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETIEFKCEADGVPVPEIK 365

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
           W  NG+ + SE  P     R  +  N + I  L  ++D   Y C A N L   Y    + 
Sbjct: 366 WIHNGKPI-SEAPP---NPRRKVTSNSIIIEKLT-KKDTXNYGCNATNSLGYVYKDVYVN 420

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641
           VL L+P   + P +  T   +G  V I C    APKP   W ++G  + +GGR K  ++G
Sbjct: 421 VLALEPEITQPPTDIATV--DGKTVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSG 477

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L I  V   D+GIY+C A+N  G  E  G L+V       ++ P    +AA      RC
Sbjct: 478 DLEIENVIFLDAGIYTCHASNKFGEVEGSGNLVVKEHTKITDE-PEDYEVAAGSTATFRC 536

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
           +A T+  L +   W  NG  I   D  E+E   I      L IT  +  D+G Y CV  +
Sbjct: 537 NAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMITKTTELDSGTYTCVAHT 592

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 821
            + +   + T+IV+  P  P  + V     T A+I WT    N  PI  Y I   T +  
Sbjct: 593 ELDEAKAQATLIVQDVPNAPKLISVT-CMTTEASIHWTPMGDNRAPILRYTIQHNTTFTP 651

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
             + +S+  +      Y           + PW+ Y F+V+A N++G   PS  S    T 
Sbjct: 652 DTWEISKDDVPATEQTYIVP--------MSPWTNYTFRVLAWNKIGTSLPSPHSDVCTTL 703

Query: 882 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKE 940
            D PY+ P  + G G    +L ISW  +P+ + NAP   Y++++R+    E +  E + +
Sbjct: 704 QDVPYKNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDITD 763

Query: 941 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +    + V   P+   Y  Y++KV AIN+ G
Sbjct: 764 WKKNSLVVDNQPT---YQRYKIKVVAINEKG 791


>gi|237858632|ref|NP_001153789.1| neurofascin isoform 3 precursor [Mus musculus]
          Length = 1174

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 229/832 (27%), Positives = 362/832 (43%), Gaps = 91/832 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP N A FENFN+ L I NV 
Sbjct: 259 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-- 631
           +A + VL + P   S + + +    Y        + C    +P P   W K+G   GS  
Sbjct: 431 NAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPIPTLRWFKNGQ--GSNL 484

Query: 632 -GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 690
            GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P    
Sbjct: 485 DGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQV 543

Query: 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNAS 748
                 +QL C    +  L +   W  +   + IGN    E ++         L I   +
Sbjct: 544 AKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVA 594

Query: 749 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
             D G Y C+  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 595 ERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 654

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  R+ G   +++ + L P+  Y+F+VIA NE+G 
Sbjct: 655 TDYVV----QFEEDQFQPG---VWHDHSRFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGS 706

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++
Sbjct: 707 SHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR 766

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                  ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 767 -------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 811


>gi|426333442|ref|XP_004028286.1| PREDICTED: neurofascin isoform 3 [Gorilla gorilla gorilla]
          Length = 1276

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 228/825 (27%), Positives = 356/825 (43%), Gaps = 79/825 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 130 PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 185

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 186 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 243

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 244 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 300

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 301 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 360

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 361 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 420

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 421 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 480

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579
             W  NGE L S      + +R    D ++        R  A+YQC   N+     ++A 
Sbjct: 481 VQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAF 535

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRK 636
           + VL + P     P              + C    +P P   W K+G   GS   GG   
Sbjct: 536 VSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYH 592

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          
Sbjct: 593 VYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTT 651

Query: 697 LQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
           +QL C    +  L +   W  +   + IGN    E ++         L I   +  D G 
Sbjct: 652 VQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGS 702

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y + 
Sbjct: 703 YTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV- 761

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
               +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G   PS P
Sbjct: 762 ---QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLP 814

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           S +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++      
Sbjct: 815 SERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR------ 868

Query: 935 SETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
            ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 869 -ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 912


>gi|237858627|ref|NP_001153787.1| neurofascin isoform 4 precursor [Rattus norvegicus]
          Length = 1157

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 225/814 (27%), Positives = 352/814 (43%), Gaps = 72/814 (8%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NG+ L S     
Sbjct: 319 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAPPNP 378

Query: 537 EDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
             +   D    +D  ++ R        A+YQC   N+     ++A + VL + P     P
Sbjct: 379 NREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-P 429

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSR 650
                         + C    +P P   W K+G   GS   GG   ++ENG+L I  + +
Sbjct: 430 RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRK 487

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L 
Sbjct: 488 EDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLK 546

Query: 711 VAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           +   W  +   + IGN    E ++         L I   +  D G Y C+  + + +   
Sbjct: 547 LTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLA 597

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNV 826
           K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y +    +      W + 
Sbjct: 598 KAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDH 657

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
           S         ++ G   +++ + L P+  Y+F+VIA NE+G   PS PS +Y T    P 
Sbjct: 658 S---------KFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPE 707

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946
             PS + G G +  ++ I+W P+       PN+ Y + WR++       ET + + NV +
Sbjct: 708 SNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTV 760

Query: 947 AVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
              R  +     Y  YE++VQA ND G GPE E 
Sbjct: 761 WGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPET 794


>gi|390477460|ref|XP_002760748.2| PREDICTED: neurofascin isoform 3 [Callithrix jacchus]
          Length = 1169

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 229/830 (27%), Positives = 356/830 (42%), Gaps = 89/830 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPIAQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 657

Query: 812 KIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+G  
Sbjct: 658 VVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSS 707

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++ 
Sbjct: 708 HPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR- 766

Query: 930 DTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                 ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 767 ------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 810


>gi|301765664|ref|XP_002918249.1| PREDICTED: neurofascin-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1174

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 223/828 (26%), Positives = 360/828 (43%), Gaps = 83/828 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +         +   +  
Sbjct: 28  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN--------SKFFNIA 79

Query: 247 SDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEF 298
            D R ++    G L+I+     R  +  G Y C A NKFG+ +S  ++L         + 
Sbjct: 80  KDPRVSMRRRSGTLVIDFRSGGRPEDYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKE 139

Query: 299 NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-A 357
           NL   P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  
Sbjct: 140 NLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNV 196

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK--------- 405
           + Q    +YSCN +   + T +    F LKV    P+++      P+ +           
Sbjct: 197 MLQDTQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPS 256

Query: 406 -TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPN 457
             +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I N
Sbjct: 257 FMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITN 316

Query: 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
           V  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P 
Sbjct: 317 VSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPK 376

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            T  W  NGE L S      + +R    D ++        R  A+YQC   N+     ++
Sbjct: 377 PTVQWMVNGEPLQSAP---RNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLAN 431

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGR 634
           A + VL + P     P              + C    +P P   W K+G   GS   GG 
Sbjct: 432 AFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGN 488

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
             ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P        
Sbjct: 489 YHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIFRMPEDQVAKRG 547

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADA 752
             +QL C    +  L +   W  +   + IGN    E ++         L I   +  D 
Sbjct: 548 TTVQLECRVKHDPSLKLTVTWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQ 598

Query: 753 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 812
           G Y C+  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y 
Sbjct: 599 GSYTCIASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYV 658

Query: 813 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
           +     +    F      +  +  ++ G   +++   L P+  Y+F+VIA NE+G   PS
Sbjct: 659 V----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPS 710

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
            PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR++    
Sbjct: 711 LPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR---- 766

Query: 933 FQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
              ET + + NV +   R  + S   Y  YE++VQA ND G GPE + 
Sbjct: 767 ---ETRETWNNVTVWGSRYVVGSTPVYVPYEIRVQAENDFGKGPEPDT 811


>gi|426333440|ref|XP_004028285.1| PREDICTED: neurofascin isoform 2 [Gorilla gorilla gorilla]
          Length = 1271

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 229/830 (27%), Positives = 356/830 (42%), Gaps = 89/830 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 130 PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 185

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 186 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 243

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 244 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 300

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 301 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 360

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 361 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 420

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 421 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 480

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 481 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 532

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 533 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 589

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 590 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 648

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 649 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 699

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 700 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDY 759

Query: 812 KIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+G  
Sbjct: 760 VVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSS 809

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++ 
Sbjct: 810 HPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR- 868

Query: 930 DTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                 ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 869 ------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 912


>gi|332811714|ref|XP_514129.3| PREDICTED: neurofascin isoform 3 [Pan troglodytes]
          Length = 1271

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 228/828 (27%), Positives = 356/828 (42%), Gaps = 85/828 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 130 PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 185

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 186 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 243

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 244 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 300

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 301 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 360

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 361 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 420

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 421 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 480

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 481 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 532

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 533 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 589

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 590 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 648

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 649 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 699

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 700 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDY 759

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G   P
Sbjct: 760 VV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHP 811

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++   
Sbjct: 812 SLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR--- 868

Query: 932 EFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
               ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 869 ----ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 912


>gi|380788299|gb|AFE66025.1| neurofascin isoform 4 precursor [Macaca mulatta]
          Length = 1169

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 229/830 (27%), Positives = 356/830 (42%), Gaps = 89/830 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 657

Query: 812 KIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+G  
Sbjct: 658 VVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSS 707

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++ 
Sbjct: 708 HPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR- 766

Query: 930 DTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                 ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 767 ------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 810



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 163/681 (23%), Positives = 263/681 (38%), Gaps = 107/681 (15%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 301 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 353

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 354 --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 409

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 410 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLD--CPFFG 467

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 468 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 520

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 521 -AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 578

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL  P     L  ++T  
Sbjct: 579 NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL--ELTDL 635

Query: 693 AHRNLQLRC-------------SAHTEELLDVAYIWTHNGVRIGNMDLNELE-TPNINID 738
           A R+++L                   EE      +W  +    G+++   L  +P +N  
Sbjct: 636 AERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQ 695

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKTSATIQ 797
             ++ +              V S+   + ++       PP   PG V+     K +  I 
Sbjct: 696 FRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 743

Query: 798 WT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           WT  +  +   P   Y +       R  WN+     S +V+G+               V 
Sbjct: 744 WTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP-------------VY 790

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL- 909
           VP   YE +V A N+ G G P   S    +  D P  AP+ +         +S+ W  + 
Sbjct: 791 VP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVY 846

Query: 910 PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           P   Q     Y   +WR            K+    F  + L+     G+ V R+   F Y
Sbjct: 847 PDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL---FPY 897

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + Y++++  +N  G GP SE 
Sbjct: 898 SNYKLEMVVVNGRGDGPRSET 918


>gi|332811716|ref|XP_003308756.1| PREDICTED: neurofascin isoform 2 [Pan troglodytes]
          Length = 1276

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 228/828 (27%), Positives = 356/828 (42%), Gaps = 85/828 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 130 PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 185

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 186 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 243

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 244 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 300

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 301 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 360

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 361 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 420

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 421 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 480

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 481 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 532

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 533 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 589

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 590 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 648

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 649 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 699

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 700 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDY 759

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G   P
Sbjct: 760 VV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHP 811

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++   
Sbjct: 812 SLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR--- 868

Query: 932 EFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
               ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 869 ----ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 912


>gi|328788305|ref|XP_395296.3| PREDICTED: neuroglian [Apis mellifera]
          Length = 1251

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 236/815 (28%), Positives = 360/815 (44%), Gaps = 65/815 (7%)

Query: 180 IENPDKIPRGPYFIKQPTD-VVFDLSKRSI-LND--ITLSCYAGGYPNPSYEWFKEDYVQ 235
           I++P +I + P     PTD  +F +++  I  ND    + C A G P P Y W K     
Sbjct: 19  IQSPPRISKQP-----PTDEQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNG--- 70

Query: 236 DRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                N   P  D R +     G L+I+ PR  ED G Y C A N++G   S SV +   
Sbjct: 71  ----KNFEWPAYDDRISQQPGRGTLVISRPRD-EDLGQYQCFAENEWGIATSNSVFVRKA 125

Query: 294 FIGEFNLKRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYD 350
            +  F  +    +  N+     + C PP  +P  N YW        ++   + R+ +  +
Sbjct: 126 ELNSFKDQNPISLDANEGQPFKLTCQPPDGFPKPNVYWLIQDTAGGIKSINNSRMTLDPE 185

Query: 351 GALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPH--SNFQQLKFP-NNFP 404
           G L+FS + + DA +   Y+C   S   +  + G    L V     S  Q    P   + 
Sbjct: 186 GNLWFSNVTRNDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKHDPVKQYV 245

Query: 405 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVED 462
               E    G K+ L C+  G P+P   W++ G  +  N      N+ + L I +V  +D
Sbjct: 246 SRKNEVALRGKKIELYCIYGGTPLPQIVWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKD 305

Query: 463 QGEYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
           +G Y C ASN     +S S+ + + A P FTI     +      + + CEA GVP     
Sbjct: 306 KGTYTCEASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETIEFKCEADGVPVPEIK 365

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
           W  NG+ + SE  P     R  +  N + I  L  ++D   Y C A N L   Y    + 
Sbjct: 366 WIHNGKPI-SEAPP---NPRRKVTSNSIIIEKLT-KKDTGNYGCNATNSLGYVYKDVYVN 420

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641
           VL L+P   + P +  T   +G  V I C    APKP   W ++G  + +GGR K  ++G
Sbjct: 421 VLALEPEITQPPTDIATV--DGKTVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSG 477

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L I  V   D+GIY+C A+N  G  E  G L+V       ++ P    +AA      RC
Sbjct: 478 DLEIENVIFLDAGIYTCHASNKFGEVEGSGNLVVKEHTRITDE-PEDYEVAAGSTATFRC 536

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
           +A T+  L +   W  NG  I   D  E+E   I      L IT  +  D+G Y C+  +
Sbjct: 537 NAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMITKTTELDSGTYTCIAHT 592

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 821
            + +   + T+IV+  P  P  + +     T A+I WT    N  PI  Y I   T +  
Sbjct: 593 ELDEAKAQATLIVQDVPNAPKLISIT-CMATEASIHWTPMGDNRAPILRYTIQHNTTFTP 651

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLV----PWSTYEFKVIAGNELGYGEPSSPSPQ 877
             + +S+  +             +IE   V    PW+ Y F+V+A N++G   PS  S  
Sbjct: 652 DTWEISKDDV------------PAIEQTYVVPMSPWTNYTFRVLAWNKIGTSLPSPHSDV 699

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSE 936
             T  D PY+ P  + G G    +L ISW  +P+ + NAP   Y+I++R+    E +  E
Sbjct: 700 CTTLQDVPYKNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMYRIYYRRDIPGEKWTIE 759

Query: 937 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
            + ++    + V   P+   Y  Y++KV AIN+ G
Sbjct: 760 DITDWKKNNLVVDNQPT---YQRYKIKVVAINEKG 791


>gi|380788287|gb|AFE66019.1| neurofascin isoform 3 precursor [Macaca mulatta]
          Length = 1174

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 229/830 (27%), Positives = 356/830 (42%), Gaps = 89/830 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 657

Query: 812 KIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+G  
Sbjct: 658 VVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSS 707

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++ 
Sbjct: 708 HPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR- 766

Query: 930 DTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                 ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 767 ------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 810



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 163/681 (23%), Positives = 263/681 (38%), Gaps = 107/681 (15%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 301 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 353

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 354 --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 409

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 410 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLD--CPFFG 467

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 468 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 520

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 521 -AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 578

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL  P     L  ++T  
Sbjct: 579 NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL--ELTDL 635

Query: 693 AHRNLQLRC-------------SAHTEELLDVAYIWTHNGVRIGNMDLNELE-TPNINID 738
           A R+++L                   EE      +W  +    G+++   L  +P +N  
Sbjct: 636 AERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQ 695

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKTSATIQ 797
             ++ +              V S+   + ++       PP   PG V+     K +  I 
Sbjct: 696 FRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 743

Query: 798 WT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           WT  +  +   P   Y +       R  WN+     S +V+G+               V 
Sbjct: 744 WTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP-------------VY 790

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL- 909
           VP   YE +V A N+ G G P   S    +  D P  AP+ +         +S+ W  + 
Sbjct: 791 VP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVY 846

Query: 910 PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           P   Q     Y   +WR            K+    F  + L+     G+ V R+   F Y
Sbjct: 847 PDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL---FPY 897

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + Y++++  +N  G GP SE 
Sbjct: 898 SNYKLEMVVVNGRGDGPRSET 918


>gi|380792623|gb|AFE68187.1| neurofascin isoform 3 precursor, partial [Macaca mulatta]
          Length = 1086

 Score =  267 bits (682), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 228/825 (27%), Positives = 356/825 (43%), Gaps = 79/825 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579
             W  NGE L S      + +R    D ++        R  A+YQC   N+     ++A 
Sbjct: 379 VQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAF 433

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRK 636
           + VL + P     P              + C    +P P   W K+G   GS   GG   
Sbjct: 434 VSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYH 490

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          
Sbjct: 491 VYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTT 549

Query: 697 LQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
           +QL C    +  L +   W  +   + IGN    E ++         L I   +  D G 
Sbjct: 550 VQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGS 600

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y + 
Sbjct: 601 YTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV- 659

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
               +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G   PS P
Sbjct: 660 ---QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSSHPSLP 712

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           S +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++      
Sbjct: 713 SERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR------ 766

Query: 935 SETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
            ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 767 -ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 810



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 163/681 (23%), Positives = 263/681 (38%), Gaps = 107/681 (15%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 301 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 353

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 354 --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 409

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 410 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLD--CPFFG 467

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 468 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 520

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 521 -AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 578

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL  P     L  ++T  
Sbjct: 579 NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL--ELTDL 635

Query: 693 AHRNLQLRC-------------SAHTEELLDVAYIWTHNGVRIGNMDLNELE-TPNINID 738
           A R+++L                   EE      +W  +    G+++   L  +P +N  
Sbjct: 636 AERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQ 695

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKTSATIQ 797
             ++ +              V S+   + ++       PP   PG V+     K +  I 
Sbjct: 696 FRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 743

Query: 798 WT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           WT  +  +   P   Y +       R  WN+     S +V+G+               V 
Sbjct: 744 WTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT-------------PVY 790

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL- 909
           VP   YE +V A N+ G G P   S    +  D P  AP+ +         +S+ W  + 
Sbjct: 791 VP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVY 846

Query: 910 PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           P   Q     Y   +WR            K+    F  + L+     G+ V R+   F Y
Sbjct: 847 PDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL---FPY 897

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + Y++++  +N  G GP SE 
Sbjct: 898 SNYKLEMVVVNGRGDGPRSET 918


>gi|326928135|ref|XP_003210238.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Meleagris gallopavo]
          Length = 1225

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 234/866 (27%), Positives = 384/866 (44%), Gaps = 88/866 (10%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           ME LL     +I    ++L+          IE P  + + P   +Q  T V +   +   
Sbjct: 1   MEMLLSTRRITICLFFFVLS------LAAAIEIPLSVAQLPTIKEQSETQVAYPFDE--- 51

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQ 265
             + T+ C A G P P++ W K+            D LSD R T    SG  +I N    
Sbjct: 52  --NFTIKCEASGNPQPTFNWTKD--------GKPFDLLSDPRITTRNNSGTFVIQNHGII 101

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
              +G Y C ASN  G+ +S+ ++L    + +F  ++   +  ++    +  C+PP   P
Sbjct: 102 TNFQGKYRCYASNVLGTAMSKEIELIVPSVPKFPKEKIEPLDVEHGDSVILHCNPPKGIP 161

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPF 383
            ++ YW        + +D+RV +S  G LYF+ +E+ D+  +Y C        T      
Sbjct: 162 PLHIYWMNIDL-QHIPQDERVSMSLKGDLYFANVEENDSRSDYCCFAAFPKLRTIVQKMP 220

Query: 384 FPLKV--FPHSNFQQLKFPN------NF-----PKTF--PEAPKA--------GDKVRLE 420
             LKV  F H+N      PN      NF     PK    PE+  +        G  ++LE
Sbjct: 221 MTLKVSRFKHAN--DSGSPNAAVTKANFIKERKPKLLIPPESAGSSSSVTVIKGGVLQLE 278

Query: 421 CVAFGYPVPSYNWTRRGSPLPRNA-YFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           C+A G P P  +W +    LP++    + F ++L I NV   D+G Y C ASN     + 
Sbjct: 279 CIAEGLPTPHLSWVKVTENLPKDKPVTDKFGKVLKIENVSAADEGTYQCTASNPVGRAKH 338

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
              + ++  P +             +L   CEA G P+ T  W  NG  ++S T      
Sbjct: 339 EFHVHVEEPPRWIKEPRGGVYSLGENLLLLCEAIGNPEPTIQWKLNGMPIDSRTF----- 393

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
            R  I D  L++  L  + D A+Y C A N+  T  +SA + VL + P       + E Y
Sbjct: 394 -RGRISDGELSLTNLQLQ-DTAVYHCEASNKHGTLLASANVNVLNIAPLILTS--DGENY 449

Query: 600 AGEGG-NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYS 657
           A   G +  + C   A+P     W KD +I   S  R ++ +NG L I    ++DSG Y+
Sbjct: 450 AAVVGYSAFLHCEIFASPAADVRWTKDDSIEPLSALRYELNKNGTLEIKETKKEDSGSYA 509

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IW 715
           C A N  G       L +    +     P    +    ++ L+C +  +  L  ++   W
Sbjct: 510 CWAANSVGKRAITANLDI-RDATKIVITPKNPQVLKSHSILLKCQSEYDSHLKNSFKLSW 568

Query: 716 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
             +G     + ++ ++   I +D   L I+N    D G Y CV  +++  ++ KT +IV 
Sbjct: 569 RKDGYE---LSVSSIQDSRIIMDMDTLFISNVMLEDQGIYTCVASTSLDSVTAKTRLIVL 625

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGK 833
             P  P  +Q+ E    S  + W  GA +  P+    I    + W    W         +
Sbjct: 626 DVPDPPEDLQLSEHQNRSVRLSWKAGANHNSPVNESIIEFEESRWEPGRW---------Q 676

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           E+ R  G    ++ + L P++ Y+F+VI+ N +G  +PS PS +Y TP   P + P  I 
Sbjct: 677 ELARAPGNTTTTLLS-LAPYTNYQFRVISVNAVGRSQPSKPSLRYVTPPAAPDKNPENIR 735

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 952
               +  ++ + WEPL   ++N P + YK+ WR++  +TE+  ET+K++    + +   P
Sbjct: 736 VEASEPNEMVMKWEPLKSMERNGPGLEYKVSWRQRGVETEWNEETVKKH---SLTLRNTP 792

Query: 953 SEFYYTEYEVKVQAINDVGPGPESEV 978
           +   +  YE+KVQAIN++G GPE  +
Sbjct: 793 T---FVPYEIKVQAINNLGAGPEPNI 815


>gi|380810880|gb|AFE77315.1| neurofascin isoform 3 precursor [Macaca mulatta]
          Length = 1180

 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 231/838 (27%), Positives = 359/838 (42%), Gaps = 92/838 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK--- 405
           LYFS  + Q    +YSCN +   + T +    F LKV    P+++      P+ +     
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGV 256

Query: 406 -------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNR 451
                   +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+
Sbjct: 257 AERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNK 316

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE 511
            L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C 
Sbjct: 317 ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCR 376

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAK 568
           A G P  T  W  NGE L S       +   D    +D  ++ R        A+YQC   
Sbjct: 377 ANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTS 428

Query: 569 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
           N+     ++A + VL + P     P              + C    +P P   W K+G  
Sbjct: 429 NEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ- 486

Query: 629 IGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 685
            GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++
Sbjct: 487 -GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRM 544

Query: 686 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLE 743
           P          +QL C    +  L +   W  +   + IGN    E ++         L 
Sbjct: 545 PEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LT 595

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           I   +  D G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  
Sbjct: 596 IFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDD 655

Query: 804 NGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
           N  PIT Y +    +      W + S         +Y G   +++   L P+  Y+F+VI
Sbjct: 656 NNSPITDYVVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVI 705

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A NE+G   PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y
Sbjct: 706 AVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRY 765

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
            + WR++       ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 766 IVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 816



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 163/681 (23%), Positives = 263/681 (38%), Gaps = 107/681 (15%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 307 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 359

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 360 --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 415

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 416 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLD--CPFFG 473

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 474 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 526

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 527 -AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 584

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL  P     L  ++T  
Sbjct: 585 NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL--ELTDL 641

Query: 693 AHRNLQLRC-------------SAHTEELLDVAYIWTHNGVRIGNMDLNELE-TPNINID 738
           A R+++L                   EE      +W  +    G+++   L  +P +N  
Sbjct: 642 AERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQ 701

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKTSATIQ 797
             ++ +              V S+   + ++       PP   PG V+     K +  I 
Sbjct: 702 FRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 749

Query: 798 WT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           WT  +  +   P   Y +       R  WN+     S +V+G+               V 
Sbjct: 750 WTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP-------------VY 796

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL- 909
           VP   YE +V A N+ G G P   S    +  D P  AP+ +         +S+ W  + 
Sbjct: 797 VP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVY 852

Query: 910 PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           P   Q     Y   +WR            K+    F  + L+     G+ V R+   F Y
Sbjct: 853 PDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL---FPY 903

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + Y++++  +N  G GP SE 
Sbjct: 904 SNYKLEMVVVNGRGDGPRSET 924


>gi|440900721|gb|ELR51796.1| Neural cell adhesion molecule L1-like protein, partial [Bos
           grunniens mutus]
          Length = 1210

 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 228/827 (27%), Positives = 365/827 (44%), Gaps = 72/827 (8%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           ++   I+ P  + + P  +KQ T  V F   +        + C A G P P + W K+D 
Sbjct: 21  KFSTAIDIPLSVQQVPTIVKQSTVQVAFPFDEY-----FQIECVAKGNPEPKFLWNKDDK 75

Query: 234 VQDRLVANLIDPLSDKRFTLS--GGNLII-NDPRQVEDRGSYHCKASNKFGSIISESVQL 290
             +         LSD R  +S  GG   I ND      +G Y C ASNK G  +SE ++ 
Sbjct: 76  PFN---------LSDPRIIVSNNGGTFRIPNDGHISHFQGKYRCFASNKLGIAMSEEIEF 126

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +F  ++   +  +     +  C+PP   P ++ YW        +E+D+RV++S 
Sbjct: 127 IVPNAPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIEL-EHIEQDERVYMSQ 185

Query: 350 DGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ------LKFPNN 402
            G LYF+ +E+ D+ N Y C        T        L V   ++ +Q      L  P +
Sbjct: 186 KGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIKQRKPRLLLPPPES 245

Query: 403 FPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVE 461
             ++F    K GD + LEC A G P P  +W + G  LP+     EN+ + L I NV  +
Sbjct: 246 GSESFVTILK-GDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETKENYGKTLKIENVSSQ 304

Query: 462 DQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
           D+G Y C ASN   +      ++++  P++T           +     CEA G P+ T  
Sbjct: 305 DKGTYRCTASNVLGSATHDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPEPTIK 364

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAMYQCRAKNQLKTRYSS 577
           W  NG       LP+E   R     +V++   I + N + +  A+YQC A N   T  ++
Sbjct: 365 WRVNG-------LPIE---RNPYSGDVMSPGEISFTNVQPNHTAVYQCEASNVHGTILAN 414

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR- 635
           A + VL ++P  +    + E YA   G +  + C   A+P+    W+K        GRR 
Sbjct: 415 ANIDVLDVRPLIQT--ADEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLDGRRY 472

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
            + ENG L I+  + +D+G YSC   N  G       L + +  +     P    +    
Sbjct: 473 HVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNA-TNLRVSPKNPRVPKSH 531

Query: 696 NLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
            L+L C +  +  L   +   W+ +G      ++N  E   I IDG  L I+N +  D G
Sbjct: 532 TLELHCESKCDSHLKYSLKLSWSKDGEA---FEMNGTEDGRIIIDGANLTISNVTMEDEG 588

Query: 754 EYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI 813
            Y C   + +  ++  T V V   P  P  + + E    S  + W  G  +   I+ Y +
Sbjct: 589 IYSCSAHTALDSVADMTQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIV 648

Query: 814 IARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
               N      W         +E+ R  G KE ++   L P+  Y+F+VIA NE+G  +P
Sbjct: 649 EFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRYQFRVIAMNEVGRSQP 698

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND- 930
           S PS  + TP   P + P  I     +  ++ I WEPL   +QN P + Y++ W+ +   
Sbjct: 699 SHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGLEYRVTWKPQGAP 758

Query: 931 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
            E++ ET+  +       +R+ +   Y  Y+V+VQAIN +G GPE +
Sbjct: 759 VEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPEPQ 799



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 225/595 (37%), Gaps = 75/595 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI--LTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   G P+ RN Y  +      ++  NV+      Y C ASN    
Sbjct: 351 LLCEAEGEPEPTIKWRVNGLPIERNPYSGDVMSPGEISFTNVQPNHTAVYQCEASNVHGT 410

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +  +    I   D+  +N A +        CE F  P+   SW +       
Sbjct: 411 ILANANIDV-LDVRPLIQTADE--ENYATVVGYSAFLHCEFFASPEAIVSWQKV-----E 462

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PL D  RY + +N         E D   Y C  +N       +A L +     L + 
Sbjct: 463 EAKPL-DGRRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATNLRVS 521

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII---GSGGRRKIFENGNL 643
           P   K P   +++  E  +    C+       K  W KDG      G+   R I +  NL
Sbjct: 522 P---KNPRVPKSHTLEL-HCESKCDSHLKYSLKLSWSKDGEAFEMNGTEDGRIIIDGANL 577

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIYSC+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 578 TISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 635

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             +   +++ YI    G +       EL      + G    +   S A    Y+   +  
Sbjct: 636 GDDHNSNISEYIVEFEGNKEEPGRWEEL----TRVQGKETTVV-LSLAPYVRYQFRVIAM 690

Query: 761 STVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKI 813
           + VG+   +  +   E PP  P      ++V         I+W          P   Y++
Sbjct: 691 NEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGLEYRV 750

Query: 814 IARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYG 869
                   TW      V  +E  V  +T R       V+ P  ++ Y+ +V A N LG G
Sbjct: 751 --------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVQVQAINHLGSG 795

Query: 870 EPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
               P PQ     +  D P  AP   G        + ++W  +P+E+ +     Y++ W 
Sbjct: 796 ----PEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNWW 851

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 852 KTKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEFHLTVLAYNSKGAGPESE 906


>gi|317418926|emb|CBN80964.1| Neural cell adhesion molecule L1-like protein [Dicentrarchus
           labrax]
          Length = 1247

 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 213/784 (27%), Positives = 356/784 (45%), Gaps = 61/784 (7%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRG 270
           ++C A G P P + W K             DP  D R      SG  +I N+    E +G
Sbjct: 62  MTCEAKGNPEPEFRWMKN--------GQEFDPFLDPRLMKEENSGTFVIPNNGNLTEYQG 113

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRA-PEIGNQNWGKAMFCDPPTNYPGVNYY 329
           +Y C ASNK G+ IS+ ++     + +F  +   P +  +     + CDPP   P +  Y
Sbjct: 114 TYRCYASNKLGTAISKEIEFIVPHVPKFPKETLDPVVVEEGQPFTLKCDPPKGIPPLQIY 173

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQ-SKVSDTGRNGPFFPLK 387
           W        +E+D+RV +  +G LYFS A+E+    +Y C     ++    +      + 
Sbjct: 174 WMTISL-QHIEQDERVSMGLNGDLYFSHAVEKDSRRDYCCFAAFPRIRTIVQKNAMSVIV 232

Query: 388 VFPHSNFQQ---LKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
              ++  Q+   L  P++  ++  +  K  D ++LEC+A G+P P   W + G  LP  A
Sbjct: 233 QTTNAILQRRPSLLTPSS-ERSETQLVKEED-LKLECIAEGFPTPQVEWVKVGHRLPIKA 290

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
             EN  ++L +P V+ ED G+Y+C+A N         T++I+  P +      +     +
Sbjct: 291 KLENHGKLLIVPRVEQEDSGKYMCKAKNALGEAVHYFTVTIEEPPEWVSEPESQLSMIGS 350

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPA 561
           D+   C A G P  T +W  NG       +PL++    +R  + D +L +R      D A
Sbjct: 351 DVLIKCSASGTPQPTITWRVNG-------VPLQEAPAANRKVLGDTIL-LRNAK-ASDSA 401

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKF 620
           +YQC A N+ +T  S+A + ++ L P    +  E E Y+  EG  V + C   ++P    
Sbjct: 402 VYQCEASNRHRTLLSNANIMIMNLPPMILTK--EGEDYSAVEGKGVMMHCKVFSSPPSTV 459

Query: 621 VWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
            W KD +     G R  + +NG+L I  V + D+G Y+C A N  G   +   ++ +  P
Sbjct: 460 TWSKDDSSESVEGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEG-SSAIDTMLYVKDP 518

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINI 737
           +     P  + I      QL C A  +E    D+  +W  + + I    LN  E     +
Sbjct: 519 TRIVVPPEHLQILIGTTAQLSCLAEYDESFKNDIELLWEKDDMEIA---LNYTENSRYFV 575

Query: 738 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797
           + G+L+I N S  D G Y CV ++ V + +    +IV   P  P  + + E    S  ++
Sbjct: 576 EDGILQIINVSHWDQGVYTCVARTPVDQDTASAWLIVLDVPDAPEYLVLSERKSKSVKLK 635

Query: 798 WTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
           W  G  +    T + I    + W    W         KE+ R  G   +++   L     
Sbjct: 636 WNPGDNHNSSTTEFIIEYEESQWEPGNW---------KELLRVPGNHNSAVLK-LHGNVD 685

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           Y F+V   N +G G  S P+ +Y  PA  P + P  I   G    ++ I+WEPL   + N
Sbjct: 686 YCFRVSGVNSVGRGPSSEPTERYKPPAAAPDKNPENIKIEGHLAHEMDINWEPLLPIEHN 745

Query: 916 APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            P + YK+ +R+++ + ++Q   +K +  V   V   P+   +  YE+K+QA N+ G GP
Sbjct: 746 GPGLEYKVSYRRQDLEEDWQEHMVKRHSFV---VKNTPT---FVPYEIKIQAKNNQGWGP 799

Query: 975 ESEV 978
           + ++
Sbjct: 800 DPKI 803



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 149/388 (38%), Gaps = 51/388 (13%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           D+ L C A G+P P  EW K   V  RL      P+  K    + G L+I    + ED G
Sbjct: 262 DLKLECIAEGFPTPQVEWVK---VGHRL------PIKAK--LENHGKLLIVPRVEQEDSG 310

Query: 271 SYHCKASNKFGSII---SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGV 326
            Y CKA N  G  +   + +++    ++ E      PE      G  +      +  P  
Sbjct: 311 KYMCKAKNALGEAVHYFTVTIEEPPEWVSE------PESQLSMIGSDVLIKCSASGTPQP 364

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
              W  +  P          V  D  L  +A +  D+  Y C    + S+  R       
Sbjct: 365 TITWRVNGVPLQEAPAANRKVLGDTILLRNA-KASDSAVYQC----EASNRHRT------ 413

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPL---- 440
            +  ++N   +  P        E   A  G  V + C  F  P  +  W++  S      
Sbjct: 414 -LLSNANIMIMNLPPMILTKEGEDYSAVEGKGVMMHCKVFSSPPSTVTWSKDDSSESVEG 472

Query: 441 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
           PR A  +N +  L I +V+  D G+Y C A N   +      + ++      +P   +H+
Sbjct: 473 PRFAVHDNGS--LEIYSVEKGDTGQYTCLAKNTEGSSAIDTMLYVKDPTRIVVP--PEHL 528

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSE-----TLPLEDQDRYFIQDNVLTIRYLN 555
             Q  +  T +   + +   S+  + ELL  +      L   +  RYF++D +L I  ++
Sbjct: 529 --QILIGTTAQLSCLAEYDESFKNDIELLWEKDDMEIALNYTENSRYFVEDGILQIINVS 586

Query: 556 PERDPAMYQCRAKNQLKTRYSSAQLRVL 583
              D  +Y C A+  +    +SA L VL
Sbjct: 587 -HWDQGVYTCVARTPVDQDTASAWLIVL 613



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 107/279 (38%), Gaps = 45/279 (16%)

Query: 208 ILNDITLSCYAGGYPNPSYEWFKEDY-VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           I +D+ + C A G P P+  W      +Q+   AN        R  L  G+ I+    + 
Sbjct: 348 IGSDVLIKCSASGTPQPTITWRVNGVPLQEAPAAN--------RKVL--GDTILLRNAKA 397

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN-QNWGKAMFCDPPTNYPG 325
            D   Y C+ASN+  +++S +  +          K   +    +  G  M C   ++ P 
Sbjct: 398 SDSAVYQCEASNRHRTLLSNANIMIMNLPPMILTKEGEDYSAVEGKGVMMHCKVFSSPPS 457

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF- 384
               W++D     V E  R  V  +G+L   ++E+ D G Y+C  ++    +  +   + 
Sbjct: 458 -TVTWSKDDSSESV-EGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEGSSAIDTMLYV 515

Query: 385 --PLK-VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-----FGYPVPSYNWTRR 436
             P + V P  + Q L                G   +L C+A     F   +    W + 
Sbjct: 516 KDPTRIVVPPEHLQIL---------------IGTTAQLSCLAEYDESFKNDI-ELLWEKD 559

Query: 437 GSPLPRNAYFENF-----NRILTIPNVKVEDQGEYICRA 470
              +  N Y EN      + IL I NV   DQG Y C A
Sbjct: 560 DMEIALN-YTENSRYFVEDGILQIINVSHWDQGVYTCVA 597


>gi|345797902|ref|XP_003434374.1| PREDICTED: neurofascin [Canis lupus familiaris]
          Length = 1169

 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 226/829 (27%), Positives = 356/829 (42%), Gaps = 85/829 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RKSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 657

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            +     +    F      +  +  ++ G   ++I   L P+  Y+F+VIA NE+G   P
Sbjct: 658 VV----QFEEDQFQPG---VWHDHSKFPGSVNSAILQ-LSPYVNYQFRVIAINEVGSSHP 709

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR++   
Sbjct: 710 SLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR--- 766

Query: 932 EFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
               ET + + N  +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 767 ----ETRETWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 811


>gi|354478085|ref|XP_003501246.1| PREDICTED: neurofascin isoform 4 [Cricetulus griseus]
          Length = 1169

 Score =  266 bits (679), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 227/831 (27%), Positives = 358/831 (43%), Gaps = 89/831 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVSERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP +   FENFN+ L I NV 
Sbjct: 259 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKTKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P    +  
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVVKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y C+  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 657

Query: 812 KIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            I    +      W + S         ++ G   +++ + L P+  Y+F+VIA NE+G  
Sbjct: 658 VIQFEEDQFQPGVWHDHS---------KFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSS 707

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++ 
Sbjct: 708 HPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR- 766

Query: 930 DTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                 ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 767 ------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 811


>gi|443700552|gb|ELT99433.1| hypothetical protein CAPTEDRAFT_120325, partial [Capitella teleta]
          Length = 1186

 Score =  266 bits (679), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 222/753 (29%), Positives = 347/753 (46%), Gaps = 55/753 (7%)

Query: 256 GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKA- 314
           G++IIN P Q  D G Y C A+N FG+ +S    L    +  F +K A  I     GKA 
Sbjct: 4   GSIIINKP-QPSDEGIYQCFATNTFGTALSTKTLLKMAVLNPFKVKDA-SIHRPQVGKAL 61

Query: 315 -MFCDPPTNYPGVNYYWARDYFPNF---VEEDKRVFVSYDGALYFSALEQID---AGNYS 367
            + C PP +YP  + YW  +   +    +  + R+ + YDG  Y + +   D   A  YS
Sbjct: 62  QLRCTPPYSYPAGSVYWGTNRPGSRLTPIATNDRIGLDYDGNFYLANVRMEDFAAAATYS 121

Query: 368 CNVQSKVSDT---GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
           C V++ V  +   G +    P    P     ++++ ++           G  +R++C+  
Sbjct: 122 CLVKNSVLRSFVIGDDNKIIPQDGTPSYEAPKVEWTSDIGPVVIR----GGMLRMKCIFS 177

Query: 425 GYPVPSYNWTR--RGSPLPRNAYF--ENFNRILTIPNVKVEDQGEYICRASN--DRSALE 478
           GYP P   W R  +G+ +PR+ +F  E+ N+ L I NV+ EDQG Y C ASN    S + 
Sbjct: 178 GYPTPRVTWRRLPQGTEMPRSHFFPEESANKELVINNVQFEDQGTYECSASNMDGGSTVS 237

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
              ++ +Q+ P F     + H   + +  + C+A G P     W  NG  +  E LP + 
Sbjct: 238 RKFSVRVQSMPFFIEKPMNVHSSEEENAEFLCKAGGSPQPEILWSING--IAVENLPRD- 294

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
             R  +  N +T R L    D  + QC A N+    +++A L VL   PSF + P ++ T
Sbjct: 295 -SRRIVTQNSITYRNLT-SSDAQVIQCNATNKHGYIFANAYLNVLAEAPSFIRAP-DAVT 351

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKK-----DGN-----IIGSGGRRKIFENGNLLISPV 648
            A    ++T+ C    AP P+  WK+      G      + G    RK  +N +L I  V
Sbjct: 352 KAAVSQDITLICEAFGAPDPEITWKRWREDDSGQKYLELVPGPPKFRKNQKN-HLTIIGV 410

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           S DD G Y C A+N  G  ++ G LIV    + +E+ P   T+ A  ++  +C+A T+EL
Sbjct: 411 SSDDQGTYECYASNKFGDVDASGDLIVRERTTIHER-PHDATVNASTDVIFKCNATTDEL 469

Query: 709 LD--VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
            D  + Y W  NG  I   D       ++N++   L IT A   D+ EY CV  + +   
Sbjct: 470 EDHNLKYEWRKNGRLI---DFQREGRLSMNMNDHSLIITGAQVEDSAEYTCVAGNGLDND 526

Query: 767 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
           S   T+ V+  P  P  V +      +A I WT G+ N  PI+ Y +     +N+++   
Sbjct: 527 SISATLKVKDVPDPPTDVNMRSCGSNTAEITWTPGSDNNVPISEYIVF----YNTSFDAA 582

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS-PSPQYNTPADKP 885
            E+  G  VD  T   + S +  L PW+ Y F V A + +G    S+  S    TP   P
Sbjct: 583 GEYTEGARVDAST---QLSAKVKLSPWAEYTFHVQAVSAMGKSPRSAFTSSTCITPQKIP 639

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
           Y  P+ +         L I WEP+P+ + N     Y + +R+KN    Q E   E  +  
Sbjct: 640 YTNPTGVCTESRAPDQLVIVWEPMPQMEHNGEGFAYFVSYRRKNYPGAQ-EISTEVTDWR 698

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + ++  ++EYE+ V+A N  G  P   V
Sbjct: 699 QTELVVGNQEIFSEYEISVRAKNSKGFSPPGTV 731



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 143/390 (36%), Gaps = 44/390 (11%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           + + C   GYP P   W        RL      P S      S    ++ +  Q ED+G+
Sbjct: 170 LRMKCIFSGYPTPRVTW-------RRLPQGTEMPRSHFFPEESANKELVINNVQFEDQGT 222

Query: 272 YHCKASN-KFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYW 330
           Y C ASN   GS +S    +    +  F +++   + +     A F       P     W
Sbjct: 223 YECSASNMDGGSTVSRKFSVRVQSM-PFFIEKPMNVHSSEEENAEFLCKAGGSPQPEILW 281

Query: 331 ARD--YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
           + +     N   + +R+      ++ +  L   DA    CN       T ++G      +
Sbjct: 282 SINGIAVENLPRDSRRIVTQ--NSITYRNLTSSDAQVIQCNA------TNKHG-----YI 328

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
           F ++    L    +F +      KA     + L C AFG P P   W R         Y 
Sbjct: 329 FANAYLNVLAEAPSFIRAPDAVTKAAVSQDITLICEAFGAPDPEITWKRWREDDSGQKYL 388

Query: 447 E----------NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
           E          N    LTI  V  +DQG Y C ASN    +++S  + ++          
Sbjct: 389 ELVPGPPKFRKNQKNHLTIIGVSSDDQGTYECYASNKFGDVDASGDLIVRERTTIHERPH 448

Query: 497 DKHMDNQADLTWTCEA----FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR 552
           D  ++   D+ + C A        ++ Y W +NG L++      E +    + D+ L I 
Sbjct: 449 DATVNASTDVIFKCNATTDELEDHNLKYEWRKNGRLID---FQREGRLSMNMNDHSLIIT 505

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
               E D A Y C A N L     SA L+V
Sbjct: 506 GAQVE-DSAEYTCVAGNGLDNDSISATLKV 534



 Score = 46.6 bits (109), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 9/100 (9%)

Query: 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEW--FKEDYVQDRLVANLI 243
           +   P FI+ P  V    +K ++  DITL C A G P+P   W  ++ED    + +  + 
Sbjct: 337 LAEAPSFIRAPDAV----TKAAVSQDITLICEAFGAPDPEITWKRWREDDSGQKYLELVP 392

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSI 283
            P    +F  +  N +       +D+G+Y C ASNKFG +
Sbjct: 393 GP---PKFRKNQKNHLTIIGVSSDDQGTYECYASNKFGDV 429


>gi|297483860|ref|XP_002693952.1| PREDICTED: neurofascin isoform 2 [Bos taurus]
 gi|296479434|tpg|DAA21549.1| TPA: neurofascin homolog (chicken) isoform 2 [Bos taurus]
          Length = 1173

 Score =  266 bits (679), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 231/845 (27%), Positives = 364/845 (43%), Gaps = 90/845 (10%)

Query: 173 TYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE 231
           T   G  IE P  + + P   KQ   D + D       ++I + C A G P PS+ W + 
Sbjct: 17  TLSLGGAIEIPMDLSQPPTITKQSVKDHIVDPR-----DNILIECEAKGNPAPSFHWTRN 71

Query: 232 DYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISE 286
                   +   +   D R ++    G L+I+     R  E  G Y C A NKFG+ +S 
Sbjct: 72  --------SKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSN 123

Query: 287 SVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343
            ++L         + NL   P +  +     + C+PP   P    +W        + +DK
Sbjct: 124 RIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDK 180

Query: 344 RVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKF 399
           RV   ++G LYFS  + Q    +YSCN +   + T +    F LKV    P+++      
Sbjct: 181 RVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNH 240

Query: 400 PNNFPK----------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
           P+ +             +P+   +      G  + LEC+A G P P   W ++G  LP +
Sbjct: 241 PDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD 300

Query: 444 -AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
            A FENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +  
Sbjct: 301 KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAP 360

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
             D    C A G P  T  W  NGE L S      + +R    D ++        R  A+
Sbjct: 361 GEDGRLVCRANGNPKPTVQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AV 415

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC   N+     ++A + VL + P     P              + C    +P P   W
Sbjct: 416 YQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRW 474

Query: 623 KKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
            K+G   GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P
Sbjct: 475 FKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDP 531

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINI 737
           +   ++P          +QL C    +  L +A  W  +   + I N    E ++     
Sbjct: 532 TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKEEDS----- 586

Query: 738 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797
               L I   +  D G Y CV  + + +   K  + V G P  P  +++ ++ + S  + 
Sbjct: 587 ----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLT 642

Query: 798 WTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
           W  G  N  PIT Y +    +      W + S         ++ G   +++   L P+  
Sbjct: 643 WIPGDDNNSPITDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLR-LSPYVN 692

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           Y+F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+W P+      
Sbjct: 693 YQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAF 752

Query: 916 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 973
            PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G G
Sbjct: 753 GPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKG 805

Query: 974 PESEV 978
           PE + 
Sbjct: 806 PEPDT 810


>gi|348502549|ref|XP_003438830.1| PREDICTED: neurofascin-like [Oreochromis niloticus]
          Length = 1149

 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 229/826 (27%), Positives = 355/826 (42%), Gaps = 96/826 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  ++QP  ++    K  I++    + + C A G P+P + W        R      +  
Sbjct: 23  PLEVRQPPTIIKQSMKEHIVDPKGTMVIECEAKGNPHPIFSW--------RRNGKYFNVA 74

Query: 247 SDKRFTLS--GGNLII---NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            D + ++    G L I   N+P + E    Y C ASN++GS  S  + L       +  +
Sbjct: 75  RDSQVSMRRRSGTLDIYARNNPEKYE--AEYQCIASNQYGSAYSHKIILQLYRPPVWPRE 132

Query: 302 RA-PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNF--VEEDKRVFVSYDGALYFS-A 357
              P + +      + CDPP   P    YW    FP    V +D+RV +   G LYFS  
Sbjct: 133 IVEPVVVSAGLPLVLSCDPPPGPPKPETYWM-STFPTMQPVRQDRRVSMGVSGDLYFSNV 191

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFP-----KTFPEAPK 412
           L      +Y CN +                 FP+ N  Q K P              AP 
Sbjct: 192 LFNDSVVDYCCNAR-----------------FPYKNVIQQKMPVVVKVLTTRAVVEAAPT 234

Query: 413 --------------AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIP 456
                          G+++ LEC+A G P P   W + G  L   +  +  NFN+++ IP
Sbjct: 235 WLSPTGSSSSVLVLQGEELLLECIAAGMPTPHITWAKDGEDLQVTSRMKVKNFNKMIQIP 294

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
               ED GEY C A N     E ++T+ ++A P +    T+  +  + +    C A G P
Sbjct: 295 KASFEDAGEYTCTAKNRLGYAEHTITVRVKATPFWLEKPTNLILAPEENGRLVCRADGAP 354

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             T SWF NGE + + T PL ++    +    L  R +  E + A+YQC A NQ     +
Sbjct: 355 RPTISWFINGEPIETAT-PLPNRQ---VSGETLIFRSVTTE-NTAVYQCNASNQYGYLLA 409

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           +A + VL   P       E      EG    + C    +P P+  W K G     G R K
Sbjct: 410 NAFINVLHATPRILGARNEF-IKVTEGSRTFLDCQYFGSPLPELRWSKYGQGNLEGNRFK 468

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
              NG L I  +  +D G Y C  +N+ G DE + R+ V   P      P  + +    +
Sbjct: 469 THSNGTLEIKHIKIEDQGTYVCVVSNIAGRDEDQVRVEVKE-PILIVTRPQSMKVMRATD 527

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
           ++L C    +    +   W  N     ++ L       I++D   L ITN +  D G Y 
Sbjct: 528 VRLECGVKADVTTPITTTWLKNK---KHLTLGW----RISMDESNLVITNVNTGDEGNYT 580

Query: 757 CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IA 815
           CV+KS + + S    ++V   P  P  +++ + ++ +  + W  G +N  PIT + +   
Sbjct: 581 CVIKSELEQKSASAHLMVMDRPNPPTNLELSDPYERTVRLSWVPGDSNHSPITGFLVQYD 640

Query: 816 RTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
             +W    W N+S          Y G   + I + L+P++ YEF+VIA NE+G   PS P
Sbjct: 641 DDDWLPGKWRNLST---------YPGNLNSVILH-LIPFTYYEFRVIAINEIGASRPSRP 690

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           S ++ T    P   P  + G G    ++ ISWEPL   + N P++ Y ++WR+++  E  
Sbjct: 691 SKRFQTSGAPPDIIPKNLKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRRRDSRE-- 748

Query: 935 SETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                E+ N     ++  I     +T YE+KVQA+ND G GPES V
Sbjct: 749 -----EWKNATTKWLKYYIYDADTFTPYEIKVQAVNDFGLGPESPV 789



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 123/316 (38%), Gaps = 26/316 (8%)

Query: 480 SVTISIQAEPNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +V + ++  P        +H+ D +  +   CEA G P   +SW RNG+  N   +  + 
Sbjct: 21  NVPLEVRQPPTIIKQSMKEHIVDPKGTMVIECEAKGNPHPIFSWRRNGKYFN---VARDS 77

Query: 539 QDRYFIQDNVLTIRYL-NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE 597
           Q     +   L I    NPE+  A YQC A NQ  + YS   +  L   P + +  +E  
Sbjct: 78  QVSMRRRSGTLDIYARNNPEKYEAEYQCIASNQYGSAYSHKIILQLYRPPVWPREIVEPV 137

Query: 598 TYAGEGGNVTIFCN-PEAAPKPKFVWKK---DGNIIGSGGRRKIFENGNLLISPVSRDDS 653
             +  G  + + C+ P   PKP+  W         +    R  +  +G+L  S V  +DS
Sbjct: 138 VVSA-GLPLVLSCDPPPGPPKPETYWMSTFPTMQPVRQDRRVSMGVSGDLYFSNVLFNDS 196

Query: 654 GI-YSCTA----TNVHG------MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
            + Y C A     NV        +     R +V   P++        ++   +  +L   
Sbjct: 197 VVDYCCNARFPYKNVIQQKMPVVVKVLTTRAVVEAAPTWLSPTGSSSSVLVLQGEELLLE 256

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
                +      W  +G      DL       +     +++I  ASF DAGEY C  K+ 
Sbjct: 257 CIAAGMPTPHITWAKDG-----EDLQVTSRMKVKNFNKMIQIPKASFEDAGEYTCTAKNR 311

Query: 763 VGKISTKTTVIVEGPP 778
           +G      TV V+  P
Sbjct: 312 LGYAEHTITVRVKATP 327


>gi|345797908|ref|XP_856076.2| PREDICTED: neurofascin isoform 5 [Canis lupus familiaris]
          Length = 1174

 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 226/829 (27%), Positives = 356/829 (42%), Gaps = 85/829 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RKSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 657

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            +     +    F      +  +  ++ G   ++I   L P+  Y+F+VIA NE+G   P
Sbjct: 658 VV----QFEEDQFQPG---VWHDHSKFPGSVNSAILQ-LSPYVNYQFRVIAINEVGSSHP 709

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR++   
Sbjct: 710 SLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR--- 766

Query: 932 EFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
               ET + + N  +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 767 ----ETRETWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 811


>gi|149058632|gb|EDM09789.1| neurofascin, isoform CRA_e [Rattus norvegicus]
          Length = 1174

 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 226/829 (27%), Positives = 358/829 (43%), Gaps = 85/829 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NG+ L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y C+  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 657

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            +     +    F      +  +  ++ G   +++ + L P+  Y+F+VIA NE+G   P
Sbjct: 658 VV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHP 709

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++   
Sbjct: 710 SLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR--- 766

Query: 932 EFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
               ET + + NV +   R  +     Y  YE++VQA ND G GPE E 
Sbjct: 767 ----ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPET 811


>gi|410986309|ref|XP_003999453.1| PREDICTED: neurofascin isoform 5 [Felis catus]
          Length = 1175

 Score =  265 bits (678), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 227/831 (27%), Positives = 357/831 (42%), Gaps = 89/831 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 29  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 84

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 85  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 142

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 143 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 199

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 200 QDMQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 259

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 260 YPQGTASSQMVLRGMDLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 319

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 320 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 379

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 380 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 431

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 432 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 488

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 489 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 547

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 548 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 598

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 599 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 658

Query: 812 KIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            +    +      W + S         ++ G   +++   L P+  Y+F+VIA NE+G  
Sbjct: 659 VVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSS 708

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            PS PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR++ 
Sbjct: 709 HPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR- 767

Query: 930 DTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                 ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 768 ------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 812


>gi|19924211|ref|NP_446361.1| neurofascin isoform 3 precursor [Rattus norvegicus]
 gi|16903210|gb|AAL27854.1| neurofascin 155 kDa isoform [Rattus norvegicus]
          Length = 1174

 Score =  265 bits (678), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 226/829 (27%), Positives = 358/829 (43%), Gaps = 85/829 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NG+ L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y C+  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 598 QGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 657

Query: 812 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            +     +    F      +  +  ++ G   +++ + L P+  Y+F+VIA NE+G   P
Sbjct: 658 VV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHP 709

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++   
Sbjct: 710 SLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR--- 766

Query: 932 EFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
               ET + + NV +   R  +     Y  YE++VQA ND G GPE E 
Sbjct: 767 ----ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPET 811


>gi|410986301|ref|XP_003999449.1| PREDICTED: neurofascin isoform 1 [Felis catus]
          Length = 1170

 Score =  265 bits (677), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 227/831 (27%), Positives = 357/831 (42%), Gaps = 89/831 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 29  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 84

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 85  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 142

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 143 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 199

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 200 QDMQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 259

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 260 YPQGTASSQMVLRGMDLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 319

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 320 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 379

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 380 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 431

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 432 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 488

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 489 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 547

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 548 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 598

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y
Sbjct: 599 QGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY 658

Query: 812 KIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            +    +      W + S         ++ G   +++   L P+  Y+F+VIA NE+G  
Sbjct: 659 VVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSS 708

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            PS PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR++ 
Sbjct: 709 HPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR- 767

Query: 930 DTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                 ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 768 ------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 812


>gi|449274452|gb|EMC83604.1| Neural cell adhesion molecule L1-like protein, partial [Columba
           livia]
          Length = 1211

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 217/819 (26%), Positives = 368/819 (44%), Gaps = 64/819 (7%)

Query: 180 IENPDKIPRGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           IE P  + + P   +QP T V +   +     D T+ C A G P+P++ W K+       
Sbjct: 27  IEIPLSVVQLPTITEQPRTQVAYPFDE-----DFTIKCEARGNPHPTFNWTKD------- 74

Query: 239 VANLIDPLSDKRFTLS--GGNLIINDPRQVED-RGSYHCKASNKFGSIISESVQLAFGFI 295
                D LSD R   S   G  ++ +   +   +G Y C ASN  G+ +SE ++L    +
Sbjct: 75  -GKPFDLLSDPRIVASNNSGTFVLQNRGIITSFQGKYRCFASNMLGTTMSEEIELIVPSV 133

Query: 296 GEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
            +F  ++   +  ++    +  C+PP   P ++ YW        + +D+RV +S  G LY
Sbjct: 134 PKFPKEKIEPLDVEHGDSVILHCNPPKGIPPLHIYWMNIDL-QHIPQDERVSMSLKGDLY 192

Query: 355 FSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNF--PKTFPEAP 411
           F+ +E+ D+  +Y C        T        LKV   SNF + + P     P++   + 
Sbjct: 193 FANVEENDSRSDYCCFAAFPTLRTIVQKMPMTLKV-SRSNFIKERKPKLLIPPESAGSSS 251

Query: 412 KA----GDKVRLECVAFGYPVPSYNWTRRGSPLPRNA-YFENFNRILTIPNVKVEDQGEY 466
                 G  + LEC+A G P P  +W +    LPR+    ENF +IL I      D+G Y
Sbjct: 252 SVTVIKGGVLLLECIAEGLPTPHLSWVKLTGNLPRDEPETENFGKILKIEQATAADEGTY 311

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
            C ASN     +    + ++  P +             +L   CEA G P+ T  W  NG
Sbjct: 312 QCTASNPMGRAKHEFHVHVEEPPQWIKEPEGGVYSIGTNLVLLCEAIGNPEPTIQWKLNG 371

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
             ++S T     + R   ++  LT   L   +D A+YQC A N+  T  ++A + VL + 
Sbjct: 372 APIDSRTF----RGRISAREISLTNLQL---QDSAVYQCEASNKHGTILATANVNVLNIA 424

Query: 587 PSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGS-GGRRKIFENGNLL 644
           P       + E YA   G +  + C   A+P     W KD +I      R ++ +NG L 
Sbjct: 425 PLILTS--DGENYATVVGYSAFLHCEIFASPAADIRWTKDESIEPLLTSRYELNKNGTLE 482

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I    ++D+G Y+C A N  G       L +          P    +    ++ L+C + 
Sbjct: 483 IKETKKEDTGSYACWAANSVGKRAITANLDIRDATKLV-VTPKNPRVLKSHSVLLKCQSE 541

Query: 705 TEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
            +  L  ++   W  +G     + +N  E   I +D   L I++ +  D G Y CV +++
Sbjct: 542 YDSHLKHSFRLSWRKDG---DELPVNSTEDGRIILDKDTLFISSVTLKDQGVYTCVARTS 598

Query: 763 VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN- 820
           +  ++ ++ ++V   P  P  +Q+ E    S  + W  GA++  PI    I      W  
Sbjct: 599 LDSVTAESQLVVLDVPDPPEDLQLSENQNRSVRLSWKAGASHNSPINELIIEFEEDRWEP 658

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             W         +E+ R  G  + ++   L P+  Y+F+V++ N +G  +PS PS +Y T
Sbjct: 659 GRW---------QELTRAPG-NDTTVLLSLAPYMNYQFRVVSVNAVGRSQPSKPSLRYAT 708

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 939
           P   P + P  I     +  ++ + WEPL   ++N P + YK+ WR++  + ++  ET+K
Sbjct: 709 PPAAPDKNPENIRVEASEPDEMVMKWEPLKPMERNGPGLEYKVSWRQRGVEADWNEETVK 768

Query: 940 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++    + +   P+   +  YE+KVQA+N++G GPE  V
Sbjct: 769 KH---SLTLRNTPT---FVPYEIKVQAVNNLGSGPEPNV 801



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 138/604 (22%), Positives = 230/604 (38%), Gaps = 86/604 (14%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFN-RILTIPNVKVEDQGEYICRASN 472
           G  + L C A G P P+  W   G+P+    +    + R +++ N++++D   Y C ASN
Sbjct: 348 GTNLVLLCEAIGNPEPTIQWKLNGAPIDSRTFRGRISAREISLTNLQLQDSAVYQCEASN 407

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGE 527
               + ++  +++    N    +     +N A +        CE F  P     W ++  
Sbjct: 408 KHGTILATANVNVL---NIAPLILTSDGENYATVVGYSAFLHCEIFASPAADIRWTKD-- 462

Query: 528 LLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV---- 582
               E++      RY +  N  L I+    E D   Y C A N +  R  +A L +    
Sbjct: 463 ----ESIEPLLTSRYELNKNGTLEIKETKKE-DTGSYACWAANSVGKRAITANLDIRDAT 517

Query: 583 -LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK----FVWKKDGN---IIGSGGR 634
            L + P    R L+S +       V + C  E     K      W+KDG+   +  +   
Sbjct: 518 KLVVTPK-NPRVLKSHS-------VLLKCQSEYDSHLKHSFRLSWRKDGDELPVNSTEDG 569

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAA 693
           R I +   L IS V+  D G+Y+C A        ++ +L+VL  P      PP+ + ++ 
Sbjct: 570 RIILDKDTLFISSVTLKDQGVYTCVARTSLDSVTAESQLVVLDVPD-----PPEDLQLSE 624

Query: 694 HRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGN-MDLNELETPNINIDGGLLEITNA 747
           ++N  +R S     +H   + ++   +  +    G   +L      +  +   L    N 
Sbjct: 625 NQNRSVRLSWKAGASHNSPINELIIEFEEDRWEPGRWQELTRAPGNDTTVLLSLAPYMNY 684

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR- 806
            F        V +S   K S +       P   P  ++V         ++W       R 
Sbjct: 685 QFRVVS-VNAVGRSQPSKPSLRYATPPAAPDKNPENIRVEASEPDEMVMKWEPLKPMERN 743

Query: 807 -PITHYKIIAR-----TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            P   YK+  R      +WN     V +H +       T R   +     VP   YE KV
Sbjct: 744 GPGLEYKVSWRQRGVEADWNEE--TVKKHSL-------TLRNTPT----FVP---YEIKV 787

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
            A N LG G   + +  Y+   D P  APS +         + + W  +P+++       
Sbjct: 788 QAVNNLGSGPEPNVTIGYSG-EDIPDAAPSDVSVDIVNSTLVKVFWFGIPKDRVRGHLRG 846

Query: 921 YKIFW--------RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
           YK+ W         K++  E Q  T     N G+    IP    ++E+ + V A N  G 
Sbjct: 847 YKVNWWKTKSMLDGKRHHPEKQFLTFVGDRNYGM----IPGLEAFSEFRLTVLAYNSKGD 902

Query: 973 GPES 976
           GPES
Sbjct: 903 GPES 906


>gi|344277016|ref|XP_003410301.1| PREDICTED: neurofascin-like isoform 2 [Loxodonta africana]
          Length = 1174

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 224/828 (27%), Positives = 356/828 (42%), Gaps = 83/828 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGEPCPSFHWTR----NSRFFNVAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I N+ 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSHKAKFENFNKALRITNIS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579
             W  NGE L S      + +R    D ++        R  A+YQC   N+     ++A 
Sbjct: 379 VQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAF 433

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRK 636
           + VL + P     P              + C    +P P   W K+G   GS   GG   
Sbjct: 434 VSVLDVPPRMLS-PRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYH 490

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           ++ENG+L I  + ++D GIY+C ATN+ G  E++  L V   P+   Q+P    +     
Sbjct: 491 VYENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEV-KDPTRIYQMPEDQVVKRGTT 549

Query: 697 LQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
           +QL C    +  L +   W  +   + +GN    E ++         L I   +  D G 
Sbjct: 550 VQLPCRVKHDPSLKLTVSWLKDDEPLYVGNRMKKEDDS---------LTIFGVAERDQGS 600

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y C+  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y + 
Sbjct: 601 YTCIASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQ 660

Query: 815 ARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
              +      W + S         ++ G   +++   L P+  Y+F+VIA NE+G   PS
Sbjct: 661 FEEDQFQPGVWHDHS---------KFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPS 710

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
            PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR++    
Sbjct: 711 LPSERYRTSGAAPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR---- 766

Query: 933 FQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
              ET   + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 767 ---ETRDTWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 811


>gi|344277020|ref|XP_003410303.1| PREDICTED: neurofascin-like isoform 4 [Loxodonta africana]
          Length = 1169

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 224/828 (27%), Positives = 356/828 (42%), Gaps = 83/828 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGEPCPSFHWTR----NSRFFNVAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I N+ 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSHKAKFENFNKALRITNIS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579
             W  NGE L S      + +R    D ++        R  A+YQC   N+     ++A 
Sbjct: 379 VQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAF 433

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRK 636
           + VL + P     P              + C    +P P   W K+G   GS   GG   
Sbjct: 434 VSVLDVPPRMLS-PRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYH 490

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           ++ENG+L I  + ++D GIY+C ATN+ G  E++  L V   P+   Q+P    +     
Sbjct: 491 VYENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEV-KDPTRIYQMPEDQVVKRGTT 549

Query: 697 LQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
           +QL C    +  L +   W  +   + +GN    E ++         L I   +  D G 
Sbjct: 550 VQLPCRVKHDPSLKLTVSWLKDDEPLYVGNRMKKEDDS---------LTIFGVAERDQGS 600

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y C+  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y + 
Sbjct: 601 YTCIASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQ 660

Query: 815 ARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
              +      W + S         ++ G   +++   L P+  Y+F+VIA NE+G   PS
Sbjct: 661 FEEDQFQPGVWHDHS---------KFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPS 710

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
            PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR++    
Sbjct: 711 LPSERYRTSGAAPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR---- 766

Query: 933 FQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
              ET   + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 767 ---ETRDTWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 811


>gi|432953128|ref|XP_004085301.1| PREDICTED: neurofascin-like, partial [Oryzias latipes]
          Length = 1072

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 221/827 (26%), Positives = 356/827 (43%), Gaps = 100/827 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  ++QP  ++    K  I++    + + C A G P+P++ W ++            +  
Sbjct: 23  PLDVRQPPTIIKQSLKDHIVDPKDTMVIECEAIGNPHPTFSWRRD--------GKYFNVA 74

Query: 247 SDKRFTLS--GGNLII---NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            D + ++    G L I   N+P + E    Y C ASN++GS  +  + L       +  +
Sbjct: 75  RDSQVSMRRRSGTLEIYARNNPEKYE--AVYQCIASNQYGSAYTHKINLQMYRPPVWPRE 132

Query: 302 -RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P + +      + C+ P   P    YW        V +D+RV +  +G LYFS  L 
Sbjct: 133 PLEPVVISAGLPLVLPCESPAGPPKPETYWMSSSM-QPVRQDRRVSMGINGDLYFSNVLF 191

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP--------NNFPKTFPE-- 409
                +Y CN +                 FPH N  Q K P         +  +  P   
Sbjct: 192 NDSVVDYCCNAR-----------------FPHKNAIQQKTPVVVKVLSTRSIAEAAPTWL 234

Query: 410 APKA---------GDKVRLECVAFGYPVPSYNWTRRGSPLPR--NAYFENFNRILTIPNV 458
           +PK          G+++ LEC+A G P P   WT+ G  L    +   +NFN+++ IP  
Sbjct: 235 SPKGSSSSKLVLQGEELLLECIAAGVPTPHIAWTKDGDELAVTPSMKIKNFNKMIQIPKA 294

Query: 459 KVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDV 518
             ED GEY C A+N    +E ++++ ++A P +    T+  +  +      C + GVP  
Sbjct: 295 AFEDAGEYTCSATNKIGYIEHTISVIVKAAPFWVEKPTNLILAPEETGRLVCRSDGVPRP 354

Query: 519 TYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 575
           T SWF NG+       P+ED   Q    +  + +T+R +  E + A+YQC A NQ     
Sbjct: 355 TISWFMNGD-------PIEDAMQQSNRLVAGDTITLRSVTAE-NTAVYQCNASNQYGYLL 406

Query: 576 SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR 635
           ++A + VL   P     P        EG    + C    +P P   W K G     G R 
Sbjct: 407 ANAFVNVLHSTPRIIG-PRNEVVKVIEGSRTFLDCRFFGSPVPDLRWSKYGQGNLEGTRF 465

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           K   NG L +  +   D G Y C  +N+ G DE++ R+ V   P      P  + +    
Sbjct: 466 KTHSNGTLEVKRIQLQDEGTYVCVISNIAGRDENQVRVEVKE-PIVIVTKPQSMKVIRGS 524

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
           +++L C+   +        W  N  ++            +++D   L IT+ +  D G Y
Sbjct: 525 DVRLECAVKADATTPFTTSWIKNKKQV-------TFGWRVSLDESNLVITDVNRGDEGNY 577

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-I 814
            CV K+ + + S    ++V   P  P  +++ +  + S  + W  G +N  PIT Y +  
Sbjct: 578 TCVFKNELDQKSASAHLLVMDRPNPPTNLELSDPFERSVRLSWVPGDSNHSPITDYLVQY 637

Query: 815 ARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
              +W    W N+S          Y G   + I + L P++ YEF+VIA N +G   PS 
Sbjct: 638 DDDDWLPGKWRNLST---------YPGNLNSVILH-LTPFTYYEFRVIAINAIGASRPSR 687

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
            S ++ T    P   P  + G G    ++ ISWEPL   + N P++ Y ++WR+++  E 
Sbjct: 688 SSARFQTSGAPPDVIPKNVKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRRRDSRE- 746

Query: 934 QSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                 E+ N     +R  I     +T YE+KVQA+ND G GPES V
Sbjct: 747 ------EWKNATTKWLRYYIYDADTFTPYEIKVQAVNDFGLGPESPV 787


>gi|363738738|ref|XP_414434.3| PREDICTED: neural cell adhesion molecule L1-like protein [Gallus
           gallus]
          Length = 1213

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 219/804 (27%), Positives = 362/804 (45%), Gaps = 76/804 (9%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVE 267
           + T+ C A G P P++ W K+            D LSD R      SG  +I N      
Sbjct: 40  NFTIKCEASGNPQPTFNWTKD--------GKPFDLLSDPRIISRNNSGTFVIQNHGIITN 91

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGV 326
            +G Y C ASN  G+ +S+ ++L    + +F  ++   +  ++    +  C+PP   P +
Sbjct: 92  FQGKYRCYASNVLGTAMSKEIELIVPSVPKFPKEKIEPLDVEHGDSVILHCNPPKGIPPL 151

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFP 385
           + YW        + +D+RV +S  G LYF+ +E+ D+  +Y C        T        
Sbjct: 152 HIYWMNIDL-QHIPQDERVSMSLKGDLYFANVEENDSRSDYCCFAAFPKLRTIVQKMPMT 210

Query: 386 LKV--FPHSNFQQLKFPN------NF-----PKTF--PEAPKA--------GDKVRLECV 422
           LKV  F H+N      PN      NF     PK    PE+  +        G  ++LEC+
Sbjct: 211 LKVSRFKHAN--DSGSPNAAVTKANFIKERKPKLLIPPESAGSSSSVTVIKGGVLQLECI 268

Query: 423 AFGYPVPSYNWTRRGSPLPRNA-YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G P P  +W +    LP++    + F ++L I NV   D+G Y C ASN     +   
Sbjct: 269 AEGLPTPHLSWVKVTGSLPKDKPVTDKFGKVLKIENVSAADEGTYQCTASNPVGRAKHEF 328

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            + ++  P +             +L   CEA G P+ T  W  NG  ++S T       R
Sbjct: 329 HVHVEEPPRWIKEPRGGVYSLGENLLLLCEAIGNPEPTIQWKLNGMPIDSRTF------R 382

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             I D  L++  L  + D A+Y C A N+  T  +SA + VL + P       + E YA 
Sbjct: 383 GRISDGELSLINLQLQ-DTAVYHCEASNKHGTLLASANVNVLNIAPLILTS--DGENYAA 439

Query: 602 EGG-NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             G +  + C   A+P     W KD +I   S  R ++ +NG L I    ++DSG Y+C 
Sbjct: 440 VVGYSAFLHCKIFASPAADVRWTKDDSIEPLSALRYELNKNGTLEIKETKKEDSGSYACW 499

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTH 717
           A N  G       L +    +     P    +    ++ L+C +  +  L  ++   W  
Sbjct: 500 AANSVGKRAITANLDIRDA-TKIVITPKNPQVLKSHSILLKCQSEYDSHLKNSFKLSWRK 558

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           +G     + ++ ++   I +D   L I+N    D G Y CV  +++  ++ KT +IV   
Sbjct: 559 DGYE---LSVSSIQDSRIVMDMDTLFISNVMLEDQGVYTCVASTSLDSVTAKTRLIVLDV 615

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEV 835
           P  P  +Q+ E    S  + W  GA++  P+    I    + W    W         +E+
Sbjct: 616 PDPPEDLQLSEHQNRSVRLSWKAGASHNSPVNESIIEFEESRWEPGRW---------QEL 666

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
            R  G    ++ + L P++ Y+F+V++ N +G  +PS PS +Y TP   P + P  I   
Sbjct: 667 ARAPGNTTTTLLS-LAPYTNYQFRVVSVNAVGRSQPSKPSLRYATPPAAPDKNPENIRVE 725

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 954
             +  ++ + WEPL   ++N P + YK+ WR++  +TE+  ET+K++    + +   P+ 
Sbjct: 726 ASEPNEMVMKWEPLKPMERNGPGLEYKVSWRQQGVETEWNEETVKKH---SLTLRNTPT- 781

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
             +  YE+KVQAIN++G GPE  +
Sbjct: 782 --FVPYEIKVQAINNLGAGPEPNI 803



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 150/354 (42%), Gaps = 54/354 (15%)

Query: 174 YQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           +++ + +E P      P +IK+P   V+ L +     ++ L C A G P P+ +W     
Sbjct: 326 HEFHVHVEEP------PRWIKEPRGGVYSLGE-----NLLLLCEAIGNPEPTIQW----- 369

Query: 234 VQDRLVANLIDPLSDKRFTLSGGNL-IINDPRQVEDRGSYHCKASNKFGSIISESVQLAF 292
              +L    ID  +  R  +S G L +IN   Q++D   YHC+ASNK G++++ S  +  
Sbjct: 370 ---KLNGMPIDSRT-FRGRISDGELSLIN--LQLQDTAVYHCEASNKHGTLLA-SANVNV 422

Query: 293 GFIGEFNLKRAPEIGNQNWGKAMFCDPPT-NYPGVNYYWARDYFPNFVE--EDKRVFVSY 349
             I    L    E      G + F        P  +  W +D   + +E     R  ++ 
Sbjct: 423 LNIAPLILTSDGENYAAVVGYSAFLHCKIFASPAADVRWTKD---DSIEPLSALRYELNK 479

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     ++ D+G+Y+C   + V   G+      L +   +    +  P N     P+
Sbjct: 480 NGTLEIKETKKEDSGSYACWAANSV---GKRAITANLDIRDATKI--VITPKN-----PQ 529

Query: 410 APKAGDKVRLECVAF--GYPVPSY--NWTRRGSPLPRNAYFENFNRI------LTIPNVK 459
             K+   + L+C +    +   S+  +W + G  L  ++  +  +RI      L I NV 
Sbjct: 530 VLKS-HSILLKCQSEYDSHLKNSFKLSWRKDGYELSVSSIQD--SRIVMDMDTLFISNVM 586

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT-DKHMDNQADLTWTCEA 512
           +EDQG Y C AS    ++ +   + +   P+    L   +H +    L+W   A
Sbjct: 587 LEDQGVYTCVASTSLDSVTAKTRLIVLDVPDPPEDLQLSEHQNRSVRLSWKAGA 640


>gi|301779003|ref|XP_002924918.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Ailuropoda melanoleuca]
          Length = 1225

 Score =  263 bits (672), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 221/840 (26%), Positives = 364/840 (43%), Gaps = 82/840 (9%)

Query: 175 QYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           ++   +E P  + + P  IKQ    V F   +  ++      C A G P P++ W K+D 
Sbjct: 20  KFSTAMEIPLSVQQVPTIIKQSKVQVAFPFDEYFLI-----ECEAKGNPEPTFMWTKDDK 74

Query: 234 VQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL 290
             D         LSD R   S   G   I N+      +G Y C ASNK G  +SE ++ 
Sbjct: 75  PFD---------LSDSRIIASNNSGTFKIPNEGHISHFQGKYRCFASNKLGVAMSEEIEF 125

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
               + +F  ++   +  +     +  C+PP   P ++ YW        +E+D+RV++S 
Sbjct: 126 IVPNVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIEL-EHIEQDERVYMSQ 184

Query: 350 DGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPLKVFPHSN---------FQQL 397
            G LYF+ +E+ D+ N  C   +  ++    +  P    +    H+N          +  
Sbjct: 185 KGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLRHANDSSSSTEIGSKAN 244

Query: 398 KFPNNFPKTFPEAPKAG----------DKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
                 P+     P++G          D + LEC A G P P  +W + G  LP+     
Sbjct: 245 SIKQRKPRLLLPPPESGSESSVTILKGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETK 304

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           EN+++ L I NV   D+G Y C A+N   +      + ++  P +T           +  
Sbjct: 305 ENYSKTLKIENVSYRDRGNYRCTANNFLGSTTHDFHVIVEEPPRWTKKPQSGVYSTGSSG 364

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
              CEA G P+ T  W  NG  ++      +      +    ++   L P    A+YQC 
Sbjct: 365 ILLCEAEGEPEPTIKWRVNGSPIDRNPFAGD-----VVSPREISFTNLQPNHT-AVYQCE 418

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKD 625
           A N   T  ++A + V+ ++P  +    + E YA   G +  + C   A+P+    W+K 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTE--DEENYATVAGYSAFLHCEFFASPEAIVSWQKV 476

Query: 626 GNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
                  GRR  ++ENG L I+  + DD+G YSC   N  G       L + +  +  + 
Sbjct: 477 EEAKPLEGRRYHVYENGTLQINKTTEDDAGSYSCWVENAKGKTAVTANLDIRNA-TKLQV 535

Query: 685 LPPKITIAAHRNLQLRCSA----HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 740
            P    +     L+L C +    H ++ L ++  W+ NG      ++N  E   I IDG 
Sbjct: 536 APKNPRVPRLHALELHCESTCDPHLKQSLKLS--WSRNGEA---FEINATEDGRIIIDGA 590

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
            L I+N +  D G Y C  ++ +  ++  T V V   P  P  +Q+ E    S  + W  
Sbjct: 591 NLTISNVTSEDQGIYSCSAQTALDSVTDATQVTVLDVPDPPESLQLSERQNRSVRLTWEA 650

Query: 801 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
           G  +   I+ Y +    N      W         +E+ R  G KE +I   L P+  Y+F
Sbjct: 651 GDDHNSHISDYIVEFEGNKEEPGRW---------EELARVQG-KETTITLSLAPYVRYQF 700

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           +VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL   +QN P 
Sbjct: 701 RVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPG 760

Query: 919 IYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+V+VQAIN +G GPE +
Sbjct: 761 LEYRVSWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINHLGSGPEPQ 814


>gi|397522459|ref|XP_003831284.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Pan paniscus]
          Length = 1209

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 228/847 (26%), Positives = 367/847 (43%), Gaps = 68/847 (8%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      +  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLLLGRGLIVSLIFFLL------KFSKAIEIPSSVQQAPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED---YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265
                + C A G P P++ W K+    Y  D  +    +         SG   I N+   
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIMTSNN---------SGTFRIPNEGHI 100

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
              +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   P
Sbjct: 101 SHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLP 160

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGPF 383
            ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T      
Sbjct: 161 PLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMP 219

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRGS 438
             L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + G 
Sbjct: 220 MKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGG 279

Query: 439 PLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD 497
            LP+     EN+ + L I NV  +D+G Y C ASN          + ++  P +T     
Sbjct: 280 DLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKQPQS 339

Query: 498 KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 557
                 ++    CEA G P  T  W  NG  +++        D  F ++  ++   L P 
Sbjct: 340 AVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPN 394

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAP 616
              A+YQC A N   T  ++A + V+ ++P  + +  + E YA   G +  + C   A+P
Sbjct: 395 HT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASP 451

Query: 617 KPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           +    W+K   +    GRR  I+ENG L I+  + +D+G YSC   N  G       L +
Sbjct: 452 EAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDI 511

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETP 733
            +  +     P    I     L+L C +  +  L   +   W+ +G      ++N  E  
Sbjct: 512 RNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDG 567

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 793
            I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E    S
Sbjct: 568 RIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRS 627

Query: 794 ATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLV 851
             + W  GA +   I+ Y +    N      W         +E+ R  G+K   I   L 
Sbjct: 628 VRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LA 677

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P+  Y+F+VIA NE+G  +PS PS ++ TP   P + P  I     +  ++ I WEPL  
Sbjct: 678 PFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 737

Query: 912 EKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAIN +
Sbjct: 738 MEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQL 791

Query: 971 GPGPESE 977
           G GP+ +
Sbjct: 792 GSGPDPQ 798



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 140/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 410 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 462 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 521 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 576

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 577 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 634

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 635 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 691

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 692 VGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 749

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 750 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 794

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y++ W K 
Sbjct: 795 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQVNWWKT 852

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 853 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|148707723|gb|EDL39670.1| neurofascin, isoform CRA_b [Mus musculus]
          Length = 972

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 231/838 (27%), Positives = 361/838 (43%), Gaps = 86/838 (10%)

Query: 177 GMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 235
           G  IE P  + + P   KQ   D + D       ++I + C A G P PS+ W +     
Sbjct: 95  GGAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNPAPSFHWTR----N 145

Query: 236 DRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAF 292
            R      DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L  
Sbjct: 146 SRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQV 203

Query: 293 G---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                  + NL   P +  +     + C+PP   P    +W        + +DKRV   +
Sbjct: 204 SKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGH 260

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           +G LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+   
Sbjct: 261 NGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTS 320

Query: 409 EAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
            +     G  + LEC+A G P P   W ++G  LP N A FENFN+ L I NV  ED GE
Sbjct: 321 SSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNVSEEDSGE 380

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRN 525
           Y C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  N
Sbjct: 381 YFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVN 440

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           GE L S      + +R    D ++        R  A+YQC   N+     ++A + VL +
Sbjct: 441 GEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDV 495

Query: 586 KP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFE 639
            P   S + + +    Y        + C    +P P   W K+G   GS   GG   ++E
Sbjct: 496 PPRMLSARNQLIRVILY----NRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYE 549

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
           NG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL
Sbjct: 550 NGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQL 608

Query: 700 RCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
            C    +  L +   W  +   + IGN    E ++         L I   +  D G Y C
Sbjct: 609 ECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTC 659

Query: 758 VVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGA 802
           +  + + +   K  + V               +G P  P  +++ ++ + S  + W  G 
Sbjct: 660 MASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGD 719

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            N  PIT Y +     +    F      +  +  R+ G   +++ + L P+  Y+F+VIA
Sbjct: 720 DNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNSAVLH-LSPYVNYQFRVIA 771

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            NE+G   PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y 
Sbjct: 772 VNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYI 831

Query: 923 IFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + WR++       ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 832 VKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 882


>gi|253314410|ref|NP_001156578.1| neural cell adhesion molecule L1-like protein precursor [Danio
           rerio]
 gi|189313742|gb|ACD88870.1| camel [Danio rerio]
          Length = 1154

 Score =  263 bits (671), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 216/795 (27%), Positives = 354/795 (44%), Gaps = 80/795 (10%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRG 270
             C A G P P++ W K+            DP  D + T    +G   I N   +V+ +G
Sbjct: 53  FKCEAKGNPRPTFRWTKDGMD--------FDPHKDPQVTTEENTGTFEIPNKKDKVKYQG 104

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYY 329
            Y C ASNK G+  SE  +     + +F   K  P +  +     + C+PP   P    Y
Sbjct: 105 KYRCYASNKLGTATSEEAEFIVPMVPKFPKEKIEPIVVTEGDSVVLECNPPQGIPPWQLY 164

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
           W  +     +E+++RV +   G LYFS  L      +Y C        T    P   LKV
Sbjct: 165 WMTNDL-RHIEQNERVSMGLSGNLYFSNTLVSDSHDDYCCFASFFKIRTIVQKPRMVLKV 223

Query: 389 FPHSNFQQ-------------LKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR 435
            P    Q+             +  P++   TF    K G+++ LEC+A G P P   W +
Sbjct: 224 KPVDAKQEDGDAKIVQERKPSILVPSSHSTTFL---KKGEELELECIAEGLPTPEVEWIK 280

Query: 436 RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI-P 494
               LP+    +NF ++LTIPN++ ED+G+Y+C+A N          + ++  P++   P
Sbjct: 281 IWGDLPKRTQIKNFGKLLTIPNIREEDEGKYMCKAKNQHGEDVHHFQVEVEEPPSWQKEP 340

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTI 551
           L  +     +D+   C A G P  T +W RNG+       PL+D        + D ++ +
Sbjct: 341 LKSQLAWIGSDIHINCSATGKPQPTITWKRNGK-------PLDDFPSTHHKMLDDRIIIL 393

Query: 552 RYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP-LESETYAGEGGNVTIFC 610
           +    ++D A+YQC A N+  +  ++A + V+   P    R  LE  T  G+  +V + C
Sbjct: 394 KA--EQKDTAVYQCEASNKHGSLLANANVLVMNHPPLILTRNYLEYATMLGK--SVIMDC 449

Query: 611 NPEAAPKPKFVWKKD---GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
           N  ++P     W+++   G++   G R  + +NG+L I  V  +D G Y C A N  G  
Sbjct: 450 NVFSSPPATLNWRREDPEGSV--DGERYSLLKNGSLQIHKVEMEDMGQYKCLANNSEGSA 507

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNM 725
                L +       E  P  + +      +L C    +  L  ++ ++W  +G+ I + 
Sbjct: 508 SITTELFIKDSTRIVEA-PQDMKVIRGSVAELECQVECDPSLRRELEFVWLKDGINILSN 566

Query: 726 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 785
                 T     D G+L+I N S +D G Y C+V++++ + +    + V   P  P  + 
Sbjct: 567 SSERYFT-----DEGILQIFNVSHSDQGNYTCIVRTSLDQDTASAYITVLDVPDPPVELL 621

Query: 786 VVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKE 843
           + ++   S  + W + + +  PIT + I    ++W    W         K++ R + RK 
Sbjct: 622 LSDLKDRSVKLHWVNTSDHNSPITEFIIQYEESHWEPEKW---------KDLLRVSSRK- 671

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            S    L     Y+F+VIA NE+G   PS PS +Y TP   P + P  I   G     + 
Sbjct: 672 FSAPLALYCHINYQFRVIAVNEIGRSHPSMPSGRYKTPPCAPDRNPENIKIEGHLPHQMD 731

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
           ISWEPL   + N P + YK+ +R    +  ++ + +K +  V   V   P+   +  YEV
Sbjct: 732 ISWEPLLPVEHNGPGLEYKLSYRLLGVEDSWKEQMVKRHSFV---VRDTPT---FVPYEV 785

Query: 963 KVQAINDVG--PGPE 975
           K+QA N  G  PGP+
Sbjct: 786 KIQAFNRHGWAPGPK 800



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 142/371 (38%), Gaps = 64/371 (17%)

Query: 155 FICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITL 214
           ++C+A  Q      + +  + + +++E P      P + K+P           I +DI +
Sbjct: 311 YMCKAKNQ------HGEDVHHFQVEVEEP------PSWQKEPLKSQLAW----IGSDIHI 354

Query: 215 SCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHC 274
           +C A G P P+  W +     D   +     L D+   L           + +D   Y C
Sbjct: 355 NCSATGKPQPTITWKRNGKPLDDFPSTHHKMLDDRIIILKA---------EQKDTAVYQC 405

Query: 275 KASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW-------GKAMFCDPPT-NYPGV 326
           +ASNK GS+++ +  L         +   P I  +N+       GK++  D    + P  
Sbjct: 406 EASNKHGSLLANANVLV--------MNHPPLILTRNYLEYATMLGKSVIMDCNVFSSPPA 457

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
              W R+  P    + +R  +  +G+L    +E  D G Y C     +++          
Sbjct: 458 TLNWRRED-PEGSVDGERYSLLKNGSLQIHKVEMEDMGQYKC-----LANNSEGSASITT 511

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV----PSYNWTRRGSPLPR 442
           ++F   + + ++ P +           G    LEC     P       + W + G  +  
Sbjct: 512 ELFIKDSTRIVEAPQDMKVI------RGSVAELECQVECDPSLRRELEFVWLKDGINILS 565

Query: 443 NA---YFENFNRILTIPNVKVEDQGEYIC--RASNDRSALESSVTISIQAEPNFTIPLTD 497
           N+   YF +   IL I NV   DQG Y C  R S D+    + +T+    +P   + L+D
Sbjct: 566 NSSERYFTD-EGILQIFNVSHSDQGNYTCIVRTSLDQDTASAYITVLDVPDPPVELLLSD 624

Query: 498 KHMDNQADLTW 508
              D    L W
Sbjct: 625 LK-DRSVKLHW 634


>gi|426339212|ref|XP_004033552.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Gorilla gorilla gorilla]
          Length = 1209

 Score =  263 bits (671), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 227/848 (26%), Positives = 369/848 (43%), Gaps = 70/848 (8%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      +  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLLLGRGLIVSLIFFLL------KFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIITS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPVVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGP 382
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T     
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRG 437
              L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + G
Sbjct: 219 PMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIG 278

Query: 438 SPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             LP+     EN+ + L I NV  +D+G Y C ASN          + ++  P +T    
Sbjct: 279 GDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQ 338

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
                  ++    CEA G P  T  W  NG  +++        D  F ++  ++   L P
Sbjct: 339 SAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQP 393

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAA 615
               A+YQC A N   T  ++A + V+ ++P  + +  + E YA   G +  + C   A+
Sbjct: 394 NHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFAS 450

Query: 616 PKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC   N  G       L 
Sbjct: 451 PEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLD 510

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELET 732
           + +  +     P    I     L+L C +  +  L   +   W+ +G      ++N  E 
Sbjct: 511 IRNA-TKLRVSPKNPRIPKSHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTED 566

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 792
             I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E    
Sbjct: 567 GRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNR 626

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVL 850
           S  + W  GA +   I+ Y +          F  ++   G+  E+ R  G+K   I   L
Sbjct: 627 SVRLTWEAGADHNSDISEYIV---------EFEGNKEEPGRWDELTRVQGKKTTVILP-L 676

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL 
Sbjct: 677 APFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLK 736

Query: 911 REKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
             +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAIN 
Sbjct: 737 SMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQ 790

Query: 970 VGPGPESE 977
           +G GP+ +
Sbjct: 791 LGSGPDPQ 798



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 142/593 (23%), Positives = 231/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 410 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 462 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   +++  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 521 P---KNPRIPKSHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 576

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 577 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 634

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   D++ YI    G +      +EL          +L +  A F    ++  +  + 
Sbjct: 635 GADHNSDISEYIVEFEGNKEEPGRWDELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 691

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 692 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 749

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 750 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 794

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 795 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 852

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 853 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|395824573|ref|XP_003785537.1| PREDICTED: neural cell adhesion molecule L1-like protein [Otolemur
           garnettii]
          Length = 1209

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 230/817 (28%), Positives = 354/817 (43%), Gaps = 66/817 (8%)

Query: 180 IENPDKIPRGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           IE P  + + P   KQ    V F   +        + C A G P P+Y W K+D   D  
Sbjct: 25  IEIPPSVQQVPTITKQSKVQVAFPFDEY-----FQIECEAKGNPEPTYTWTKDDKPFD-- 77

Query: 239 VANLIDPLSDKR---FTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
                  LSD R   F  SG   I N+      +G Y C ASNK G  +SE ++     +
Sbjct: 78  -------LSDPRIIVFNNSGTFKIPNEGHISHFQGKYRCFASNKLGVAMSEEIEFIVPSV 130

Query: 296 GEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
            +F  ++   +  +     +  C+PP   P ++ YW        +++D+RV++S  G LY
Sbjct: 131 PKFPKEKIDPLEVEEGDPIVLPCNPPQGLPPLHIYWMNIEL-EHIQQDERVYMSQKGDLY 189

Query: 355 FSALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413
           F+ +E  D+ N Y C        T        L V   ++ +Q K     P T   +   
Sbjct: 190 FANVEDKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIKQRKPRLLLPPTESGSGSK 249

Query: 414 -------GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEY 466
                  GD + LEC A G P P  +W + G  LP+     N+N+ L I NV   D+G Y
Sbjct: 250 SSVTVLKGDTLLLECFAEGLPTPHIDWKKLGGDLPKERD-TNYNKTLKIENVSYRDKGNY 308

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
            C ASN          + ++  P++T           +     CEA G P  T  W  NG
Sbjct: 309 RCTASNFLGTATHDFHVIVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPQPTIKWRVNG 368

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD-PAMYQCRAKNQLKTRYSSAQLRVLTL 585
             ++    P    D  F ++    I ++N + +  A+YQC A N   T  ++A + V+ +
Sbjct: 369 SPIDKHPFP---GDVVFPRE----ISFINLQPNHTAVYQCEASNIHGTILANANIDVVDV 421

Query: 586 KPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK-IFENGNL 643
           +P       + E YA   G N  + C   A+P+    W+K        GRR  I ENG L
Sbjct: 422 RPLILTE--DGENYATVVGYNAFLHCEFFASPEAIVSWQKVEEAKPLEGRRHWIHENGTL 479

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL---- 699
            IS  + DD+G YSC   N  G       L + +  +     P    I     L+L    
Sbjct: 480 QISSTTEDDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHVLELHCES 538

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 759
           +C +H ++ L ++  W  +G      ++N  E   I IDG  L I+N +  D G Y CV 
Sbjct: 539 KCDSHLKDSLKLS--WNKDGEA---FEMNGTEDGRIIIDGANLTISNVTLEDQGVYSCVA 593

Query: 760 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 819
           ++ +  I+  T + V   P  P  + + +    S  + W  G  +   I+ Y I    N 
Sbjct: 594 QTALDSIAAGTQLTVLDVPDPPENLHLSDRENRSVRLTWEAGDDHNSNISEYIIEFEGN- 652

Query: 820 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
                   E    +E+ R  G K  ++   L P+  Y+F+V A NE+G  EPS PS  + 
Sbjct: 653 ------KEEPGRWEELTRVQG-KATTVILPLAPYVRYQFRVKAVNEVGKSEPSQPSDHHE 705

Query: 880 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETL 938
           TP   P + P  I     +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+
Sbjct: 706 TPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETV 765

Query: 939 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
             +       +R+ +   Y  Y+VKVQA+N +G GPE
Sbjct: 766 TNH------TLRVMTPTVYAPYDVKVQAVNQLGSGPE 796



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 231/593 (38%), Gaps = 69/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+ ++ +  +  F R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPIDKHPFPGDVVFPREISFINLQPNHTAVYQCEASNIHGT 409

Query: 477 LESSVTISI-QAEPNFTIPLTDKHMDNQADLTWT----CEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    P   + LT+   +    + +     CE F  P+   SW +       
Sbjct: 410 ILANANIDVVDVRP---LILTEDGENYATVVGYNAFLHCEFFASPEAIVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 462 EAKPLEGRRHWIHENGTLQISSTT-EDDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII---GSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG      G+   R I +  NL
Sbjct: 521 P---KNPRIPKLHVLEL-HCESKCDSHLKDSLKLSWNKDGEAFEMNGTEDGRIIIDGANL 576

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D G+YSC A        +  +L VL  P   E L   ++   +R+++L   A
Sbjct: 577 TISNVTLEDQGVYSCVAQTALDSIAAGTQLTVLDVPDPPENL--HLSDRENRSVRLTWEA 634

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL      + G    +     A    Y+  VK+ 
Sbjct: 635 GDDHNSNISEYIIEFEGNKEEPGRWEEL----TRVQGKATTVI-LPLAPYVRYQFRVKAV 689

Query: 763 --VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKI 813
             VGK   ++ +   E PP  P      ++V         I+W          P   Y++
Sbjct: 690 NEVGKSEPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749

Query: 814 IARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYG 869
                   TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G
Sbjct: 750 --------TWKPQGAPVEWEEETVTNHTLR-------VMTPTVYAPYDVKVQAVNQLGSG 794

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            P   S    +  D P  AP   G        + ++W P+P+++ +     Y+I W K  
Sbjct: 795 -PEPLSVTLYSGEDYPDTAPVIRGVDVINSTLVKVTWSPIPKDRVHGRLKGYQINWWKTK 853

Query: 930 DTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                    KE   +  A  R    +PS   ++E+ + V A N  G GPESE 
Sbjct: 854 SLLDGRTHPKEVNFLRFAGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEA 906


>gi|35215309|ref|NP_874385.1| neurofascin isoform 1 precursor [Mus musculus]
 gi|38372295|sp|Q810U3.1|NFASC_MOUSE RecName: Full=Neurofascin; Flags: Precursor
 gi|29466308|emb|CAD65849.1| Neurofascin [Mus musculus]
          Length = 1240

 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 232/854 (27%), Positives = 368/854 (43%), Gaps = 86/854 (10%)

Query: 161 IQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAG 219
           I  + +LL+     +  MD    +++ + P   KQ   D + D       ++I + C A 
Sbjct: 12  IALILFLLSLGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPR-----DNILIECEAK 66

Query: 220 GYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKA 276
           G P PS+ W +      R      DP    R     G L+I+     R  E  G Y C A
Sbjct: 67  GNPAPSFHWTR----NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFA 120

Query: 277 SNKFGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD 333
            NKFG+ +S  ++L         + NL   P +  +     + C+PP   P    +W   
Sbjct: 121 RNKFGTALSNRIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSS 178

Query: 334 YFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392
                + +DKRV   ++G LYFS  + Q    +YSCN +   + T +    F LKV    
Sbjct: 179 SM-EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTR 237

Query: 393 NFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENF 449
              +      +P+    +     G  + LEC+A G P P   W ++G  LP N A FENF
Sbjct: 238 GVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENF 297

Query: 450 NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWT 509
           N+ L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    
Sbjct: 298 NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLV 357

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
           C A G P  T  W  NGE L S      + +R    D ++        R  A+YQC   N
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSN 412

Query: 570 QLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
           +     ++A + VL + P   S + + +    Y        + C    +P P   W K+G
Sbjct: 413 EHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPIPTLRWFKNG 468

Query: 627 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
              GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   
Sbjct: 469 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 525

Query: 684 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 741
           ++P          +QL C    +  L +   W  +   + IGN    E ++         
Sbjct: 526 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--------- 576

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 786
           L I   +  D G Y C+  + + +   K  + V               +G P  P  +++
Sbjct: 577 LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 636

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            ++ + S  + W  G  N  PIT Y +     +    F      +  +  R+ G   +++
Sbjct: 637 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNSAV 689

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
            + L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+W
Sbjct: 690 LH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 748

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 964
            P+       PN+ Y + WR++       ET + + NV +   R  +     Y  YE++V
Sbjct: 749 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRV 801

Query: 965 QAINDVGPGPESEV 978
           QA ND G GPE + 
Sbjct: 802 QAENDFGKGPEPDT 815


>gi|194221130|ref|XP_001497302.2| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Equus caballus]
          Length = 1209

 Score =  262 bits (669), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 226/853 (26%), Positives = 370/853 (43%), Gaps = 80/853 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           ME LL      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEMLLSGRGLIISLIFFLL------KFSTAIEIPLSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQ 265
                + C A G P P++ W K+D   +         LSD +  +S   G   I N+   
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDDKPFN---------LSDPQIIVSNNSGTFKIPNEGHI 100

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
              +G Y C ASNK G  +SE ++     + +F  ++   +  +  G A+   C+PP   
Sbjct: 101 SHFQGKYRCFASNKLGVAVSEEIEFIVPNVPKFPKEKIEPLEVEE-GDAIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGP 382
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T     
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG----------DKVRLECVAFGYPVPSYN 432
              L V   ++ +Q K     P+     P++G          + + LEC A G P P  +
Sbjct: 219 PMKLTVNSSNSIKQRK-----PRLLLPPPESGGESSLTILKGETLLLECFAEGLPTPQVD 273

Query: 433 WTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 491
           W + G  LP+     EN+ + L I NV   D+G Y C A+N   +      I+++  P +
Sbjct: 274 WNKLGGDLPKGRETKENYGKTLKIENVSYRDKGIYRCTANNFLGSATHDFHITVEEPPRW 333

Query: 492 TIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTI 551
           T           +     CEA G P+ T  W  NG  +       +      +    ++ 
Sbjct: 334 TKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSPIEKNPFAGD-----VVSSREISF 388

Query: 552 RYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFC 610
             L P    A+YQC A N   T  ++A + V+ ++P  +    + E YA   G +  ++C
Sbjct: 389 TNLQPNHT-AVYQCEASNAHGTILANANIDVVDVRPLIQTE--DEENYATVVGYSAFLYC 445

Query: 611 NPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
              ++P+    W+K        GRR  I+ENG L I+  + +D+G YSC   N  G    
Sbjct: 446 EFFSSPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAKGKTAV 505

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDL 727
              L + +  +     P    +     L+LRC +  +  L   +   W+ +G      ++
Sbjct: 506 TANLDIRNA-TKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDGEA---FEI 561

Query: 728 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
           N  E   I IDG  L I+N +  D G Y C  ++ +  ++  T V +   P  P  + + 
Sbjct: 562 NGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPDPPENLHLS 621

Query: 788 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEAS 845
           E    S  + W  G  +   I+ Y +    N      W         +E+ R  G KE +
Sbjct: 622 ERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETT 671

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
           +   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I 
Sbjct: 672 VLLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIK 731

Query: 906 WEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 964
           WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+V+V
Sbjct: 732 WEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQV 785

Query: 965 QAINDVGPGPESE 977
           QA+N +G GPE +
Sbjct: 786 QAVNHLGSGPEPQ 798



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 139/590 (23%), Positives = 228/590 (38%), Gaps = 65/590 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENF--NRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+ +N +  +   +R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPEPTIKWRVNGSPIEKNPFAGDVVSSREISFTNLQPNHTAVYQCEASNAHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +  +    I   D+  +N A +        CE F  P+   SW +       
Sbjct: 410 ILANANIDV-VDVRPLIQTEDE--ENYATVVGYSAFLYCEFFSSPEAIVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N       +A L +     L + 
Sbjct: 462 EAKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAKGKTAVTANLDIRNATKLRIS 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   + P  S T      +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 521 PKNPRVP-RSHTLELRCEST---CDSYLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 576

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIYSC+A           ++ +L  P   E L   ++   +R+++L   A
Sbjct: 577 TISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPDPPENL--HLSERQNRSVRLTWEA 634

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          LL +  A +    ++  +  + 
Sbjct: 635 GDDHNSNISEYIVEFEGNKEEPGRWEELTRVQGKETTVLLSL--APYVRY-QFRVIAVNE 691

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 692 VGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 749

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ +V A N LG G P
Sbjct: 750 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPTVYAPYDVQVQAVNHLGSG-P 795

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
              S    +  D P  AP   G        + ++W  +P+++ +     Y+I W K    
Sbjct: 796 EPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKDRVHGHLKGYQINWWKTKSL 855

Query: 932 EFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                  KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 856 LDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|62088238|dbj|BAD92566.1| Neural cell adhesion molecule variant [Homo sapiens]
          Length = 1210

 Score =  262 bits (669), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 229/849 (26%), Positives = 368/849 (43%), Gaps = 70/849 (8%)

Query: 149 GMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRS 207
            MEPLL +    I  L +LL      ++   IE P  + + P  IKQ    V F   +  
Sbjct: 2   AMEPLL-LGRGLIVYLMFLL-----LKFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY- 54

Query: 208 ILNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDP 263
                 + C A G P P++ W K+     +   R++ +            SG   I N+ 
Sbjct: 55  ----FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPS----------NNSGTFRIPNEG 100

Query: 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTN 322
                +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP  
Sbjct: 101 HISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKG 160

Query: 323 YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNG 381
            P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T    
Sbjct: 161 LPPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQK 219

Query: 382 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRR 436
               L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + 
Sbjct: 220 MPMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKI 279

Query: 437 GSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
           G  LP+     EN+ + L I NV  +D+G Y C ASN          + ++  P +T   
Sbjct: 280 GGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKP 339

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN 555
                   ++    CEA G P  T  W  NG  +++        D  F ++  ++   L 
Sbjct: 340 QSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQ 394

Query: 556 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEA 614
           P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA   G +  + C   A
Sbjct: 395 PNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFA 451

Query: 615 APKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 673
           +P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC   N  G       L
Sbjct: 452 SPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANL 511

Query: 674 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELE 731
            + +  +     P    I     L+L C +  +  L   +   W+ +G      ++N  E
Sbjct: 512 DIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTE 567

Query: 732 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 791
              I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E   
Sbjct: 568 DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQN 627

Query: 792 TSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENV 849
            S  + W  GA +   I+ Y +    N      W         +E+ R  G+K   I   
Sbjct: 628 RSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP- 677

Query: 850 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 909
           L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL
Sbjct: 678 LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPL 737

Query: 910 PREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 968
              +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAIN
Sbjct: 738 KSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAIN 791

Query: 969 DVGPGPESE 977
            +G GP+ +
Sbjct: 792 QLGSGPDPQ 800



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 352 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 411

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 412 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 463

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 464 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 522

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 523 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 578

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 579 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 636

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 637 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 693

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 694 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 751

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 752 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 796

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 797 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 854

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 855 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 907


>gi|85397970|gb|AAI04919.1| CHL1 protein [Homo sapiens]
 gi|168277596|dbj|BAG10776.1| neural cell adhesion molecule L1-like protein precursor [synthetic
           construct]
 gi|219520164|gb|AAI43497.1| CHL1 protein [Homo sapiens]
          Length = 1208

 Score =  262 bits (669), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 229/848 (27%), Positives = 368/848 (43%), Gaps = 70/848 (8%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL +    I  L +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLL-LGRGLIVYLMFLL-----LKFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGP 382
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T     
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRG 437
              L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + G
Sbjct: 219 PMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIG 278

Query: 438 SPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             LP+     EN+ + L I NV  +D+G Y C ASN          + ++  P +T    
Sbjct: 279 GDLPKGREAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQ 338

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
                  ++    CEA G P  T  W  NG  +++        D  F ++  ++   L P
Sbjct: 339 SAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQP 393

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAA 615
               A+YQC A N   T  ++A + V+ ++P  + +  + E YA   G +  + C   A+
Sbjct: 394 NHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFAS 450

Query: 616 PKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC   N  G       L 
Sbjct: 451 PEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLD 510

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELET 732
           + +  +     P    I     L+L C +  +  L   +   W+ +G      ++N  E 
Sbjct: 511 IRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTED 566

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 792
             I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E    
Sbjct: 567 GRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNR 626

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           S  + W  GA +   I+ Y +    N      W         +E+ R  G+K   I   L
Sbjct: 627 SVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-L 676

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL 
Sbjct: 677 APFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLK 736

Query: 911 REKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
             +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAIN 
Sbjct: 737 SMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQ 790

Query: 970 VGPGPESE 977
           +G GP+ +
Sbjct: 791 LGSGPDPQ 798



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 410 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 462 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 521 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 576

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 577 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 634

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 635 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 691

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 692 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 749

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 750 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 794

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 795 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 852

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 853 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|237858675|ref|NP_001005388.2| neurofascin isoform 1 precursor [Homo sapiens]
 gi|115527434|gb|AAI17675.2| NFASC protein [Homo sapiens]
 gi|219520716|gb|AAI44455.1| Unknown (protein for MGC:177997) [Homo sapiens]
          Length = 1240

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 229/833 (27%), Positives = 355/833 (42%), Gaps = 84/833 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +    +K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI 658

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+
Sbjct: 659 TDYVVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAINEV 708

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 709 GSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 768

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
           ++       ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 769 RR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 814


>gi|193784931|dbj|BAG54084.1| unnamed protein product [Homo sapiens]
          Length = 828

 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 203/596 (34%), Positives = 282/596 (47%), Gaps = 28/596 (4%)

Query: 392 SNFQQLKFPNNFPKTFPEAPKA----------GDKVRLECVAFGYPVPSYNWTRRGSPLP 441
           S F QL       + F  + KA          G +V LEC AFG PVP   W +    L 
Sbjct: 10  SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKADGSL- 68

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
            +  +      L IP+V  ED+G Y C A N +        I +QA+P +   ++D   D
Sbjct: 69  -SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEAD 127

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             ++L W C A G P  T  W RNGELL S       Q+R  +    L    L+ E D  
Sbjct: 128 IGSNLRWGCAAAGKPRPTVRWLRNGELLAS-------QNRVEVLAGDLRFSKLSLE-DSG 179

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           MYQC A+N+  T Y+SA+L V  L P F+  P+     A  GG + I C P AAPK   +
Sbjct: 180 MYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVL 239

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           W K   I+ +  R  +  +G L+I  +SR D G Y+C A N  G   S G ++ +   + 
Sbjct: 240 WSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDATK 298

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGG 740
               P    I    NL L+C A  +  +D+ + WT +   I  +         N+    G
Sbjct: 299 ITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIG 358

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
            L I NA     G+Y C+ ++ V   S + TV+V GPPG PGGV V ++  T+  + W+ 
Sbjct: 359 DLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWSR 418

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
           G  N  PI  Y + ART     W  V  +    E     G  E +    L PW  YEF+V
Sbjct: 419 GFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFRV 473

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           IA N LG GEPS PS +  T    P  APS + GGGG  G+L ++W P+ RE QN     
Sbjct: 474 IASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFG 533

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           Y + +R++  T +Q+  +    +    V    S   YT +EVK+++ N  G GPES
Sbjct: 534 YLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPES 588



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 139/369 (37%), Gaps = 48/369 (13%)

Query: 133 YSFSQSLKRWGFERVTG-MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPY 191
           ++F   + R  + +  G + P     E ++Q       D+ TY+   +        +G  
Sbjct: 50  FAFGNPVPRIKWRKADGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRI 109

Query: 192 FIK-QP--TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            ++ QP    V+ D ++  I +++   C A G P P+  W +       L+A      S 
Sbjct: 110 IVQAQPEWLKVISD-TEADIGSNLRWGCAAAGKPRPTVRWLR----NGELLA------SQ 158

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE-IG 307
            R  +  G+L  +    +ED G Y C A NK G+I + +         +F L      I 
Sbjct: 159 NRVEVLAGDLRFSK-LSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIP 217

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
               G+ +    P   P     W++      +    RV V+ DG L    + + D G Y+
Sbjct: 218 AARGGEILIPCQPRAAPKAVVLWSKGT--EILVNSSRVTVTPDGTLIIRNISRSDEGKYT 275

Query: 368 C---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
           C   N   K + TG        K+    +   +                GD + L+C A 
Sbjct: 276 CFAENFMGKANSTGILSVRDATKITLAPSSADINL--------------GDNLTLQCHAS 321

Query: 425 GYPVP--SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASN-- 472
             P    ++ WT    P+  +    ++ R         LTI N ++   G+Y C A    
Sbjct: 322 HDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVV 381

Query: 473 DRSALESSV 481
           D ++ E++V
Sbjct: 382 DSASKEATV 390



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 146/377 (38%), Gaps = 39/377 (10%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           +TL C+A G P P  +W K D          + P    ++T +   L I      ED G+
Sbjct: 45  VTLECFAFGNPVPRIKWRKAD--------GSLSP----QWTTAEPTLQIPS-VSFEDEGT 91

Query: 272 YHCKASNKFGSIISES---VQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNY 328
           Y C+A N  G    +    VQ    ++   +   A    N  WG A    P    P V  
Sbjct: 92  YECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKP---RPTVR- 147

Query: 329 YWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
            W R+     +    RV V   G L FS L   D+G Y C  ++K      +       +
Sbjct: 148 -WLRNG--ELLASQNRVEV-LAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL 203

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN 448
            P      ++      +  P A   G ++ + C     P     W+ +G+ +  N+    
Sbjct: 204 APDFRLNPVR------RLIPAA--RGGEILIPCQPRAAPKAVVLWS-KGTEILVNSSRVT 254

Query: 449 F--NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
              +  L I N+   D+G+Y C A N      S+  +S++     T+  +   ++   +L
Sbjct: 255 VTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNL 314

Query: 507 TWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMY 563
           T  C A   P  D+T++W  +   ++ +  P     R  +++ +  +  LN + R    Y
Sbjct: 315 TLQCHASHDPTMDLTFTWTLDDFPIDFDK-PGGHYRRTNVKETIGDLTILNAQLRHGGKY 373

Query: 564 QCRAKNQLKTRYSSAQL 580
            C A+  + +    A +
Sbjct: 374 TCMAQTVVDSASKEATV 390



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P++ +E K+ + N  G G P S +    +  ++P  AP+++   G    +++++WEP+ +
Sbjct: 568 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 625

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +  N   + Y+I + K  D E  ++ ++  G    A  R+      T+Y V V+A N  G
Sbjct: 626 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 683

Query: 972 PGPES 976
            GP S
Sbjct: 684 TGPAS 688


>gi|358438179|ref|NP_001240316.1| neural cell adhesion molecule L1-like protein isoform 2 precursor
           [Homo sapiens]
 gi|317373561|sp|O00533.4|CHL1_HUMAN RecName: Full=Neural cell adhesion molecule L1-like protein;
           AltName: Full=Close homolog of L1; Contains: RecName:
           Full=Processed neural cell adhesion molecule L1-like
           protein; Flags: Precursor
          Length = 1208

 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 229/848 (27%), Positives = 368/848 (43%), Gaps = 70/848 (8%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL +    I  L +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLL-LGRGLIVYLMFLL-----LKFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGP 382
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T     
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRG 437
              L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + G
Sbjct: 219 PMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIG 278

Query: 438 SPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             LP+     EN+ + L I NV  +D+G Y C ASN          + ++  P +T    
Sbjct: 279 GDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQ 338

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
                  ++    CEA G P  T  W  NG  +++        D  F ++  ++   L P
Sbjct: 339 SAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQP 393

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAA 615
               A+YQC A N   T  ++A + V+ ++P  + +  + E YA   G +  + C   A+
Sbjct: 394 NHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFAS 450

Query: 616 PKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC   N  G       L 
Sbjct: 451 PEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLD 510

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELET 732
           + +  +     P    I     L+L C +  +  L   +   W+ +G      ++N  E 
Sbjct: 511 IRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTED 566

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 792
             I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E    
Sbjct: 567 GRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNR 626

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           S  + W  GA +   I+ Y +    N      W         +E+ R  G+K   I   L
Sbjct: 627 SVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-L 676

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL 
Sbjct: 677 APFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLK 736

Query: 911 REKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
             +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAIN 
Sbjct: 737 SMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQ 790

Query: 970 VGPGPESE 977
           +G GP+ +
Sbjct: 791 LGSGPDPQ 798



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 410 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 462 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 521 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 576

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 577 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 634

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 635 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 691

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 692 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 749

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 750 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 794

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 795 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 852

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 853 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|193785234|dbj|BAG54387.1| unnamed protein product [Homo sapiens]
          Length = 1113

 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 229/846 (27%), Positives = 368/846 (43%), Gaps = 66/846 (7%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL +    I  L +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLL-LGRGLIVYLMFLL-----LKFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGP 382
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T     
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRG 437
              L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + G
Sbjct: 219 PMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIG 278

Query: 438 SPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             LP+     EN+ + L I NV  +D+G Y C ASN          + ++  P +T    
Sbjct: 279 GDLPKGREAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQ 338

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
                  ++    CEA G P  T  W  NG  +++        D  F ++  ++   L P
Sbjct: 339 SAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQP 393

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAA 615
               A+YQC A N   T  ++A + V+ ++P  + +  + E YA   G +  + C   A+
Sbjct: 394 NHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFAS 450

Query: 616 PKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC   N  G       L 
Sbjct: 451 PEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLD 510

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELET 732
           + +  +     P    I     L+L C +  +  L   +   W+ +G      ++N  E 
Sbjct: 511 IRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG---EAFEINGTED 566

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 792
             I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E    
Sbjct: 567 GRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNR 626

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
           S  + W  GA +   I+ Y +    N         E    +E+ R  G+K   I   L P
Sbjct: 627 SVRLTWEAGADHNSNISEYIVEFEGN-------KEEPGRWEELTRVQGKKTTVILP-LAP 678

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           +  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL   
Sbjct: 679 FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 738

Query: 913 KQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAIN +G
Sbjct: 739 EQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLG 792

Query: 972 PGPESE 977
            GP+ +
Sbjct: 793 SGPDPQ 798



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 141/594 (23%), Positives = 227/594 (38%), Gaps = 73/594 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 410 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 462 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 520

Query: 587 PSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGN 642
           P   + P L       E       C+       K  W KDG    I G+   R I +  N
Sbjct: 521 PKNPRIPKLHMLELHCESK-----CDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGAN 575

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   
Sbjct: 576 LTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWE 633

Query: 703 AHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
           A  +   +++ YI    G +       EL          +L +  A F    ++  +  +
Sbjct: 634 AGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVN 690

Query: 762 TVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKII 814
            VG+   ++ +   E PP  P      ++V         I+W          P   Y++ 
Sbjct: 691 EVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV- 749

Query: 815 ARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGE 870
                  TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G 
Sbjct: 750 -------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG- 794

Query: 871 PSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
              P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K
Sbjct: 795 ---PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWK 851

Query: 928 KNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                      KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 852 TKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|291402557|ref|XP_002717617.1| PREDICTED: neurofascin isoform 2 [Oryctolagus cuniculus]
          Length = 1157

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 223/811 (27%), Positives = 345/811 (42%), Gaps = 66/811 (8%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVIL 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 319 IRHTISVRVKAAPYWLDEPKNLVLAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 375

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 376 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 432

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   + ENG+L I  + ++D 
Sbjct: 433 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVHENGSLEIKMIRKEDQ 490

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +  
Sbjct: 491 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTV 549

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + I N    E ++         L I   +  D G Y CV  + + +   K  
Sbjct: 550 SWLKDEEPLYISNRMKKEDDS---------LTIFGVAEKDQGSYTCVASTELDQDLAKAY 600

Query: 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEH 829
           + V G P  P  +++ ++ + S  + W  G  N  PIT Y +    +      W + S  
Sbjct: 601 LTVMGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHS-- 658

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
                  ++ G   +++   L P+  Y+F+VIA NE+G   PS PS +Y T    P   P
Sbjct: 659 -------KFPGNVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 710

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
             + G G +  ++ I+W P+       PN+ Y + WR++       ET   + N  +   
Sbjct: 711 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRDAWNNATVWGS 763

Query: 950 R--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           R  +     Y  YE++VQA ND G  PE E 
Sbjct: 764 RYVVGQTPVYVPYEIRVQAENDFGKAPEPET 794


>gi|296474989|tpg|DAA17104.1| TPA: cell adhesion molecule with homology to L1CAM (close homolog
           of L1)-like [Bos taurus]
          Length = 1225

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 226/842 (26%), Positives = 368/842 (43%), Gaps = 86/842 (10%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           ++   I+ P  + + P  +KQ T  V F   +        + C A G P P + W K+D 
Sbjct: 20  KFSTAIDIPLSVQQVPTIVKQSTVQVAFPFDEY-----FQIECVAKGNPEPKFLWNKDDK 74

Query: 234 VQDRLVANLIDPLSDKRFTLS--GGNLII-NDPRQVEDRGSYHCKASNKFGSIISESVQL 290
             +         LSD R  +S  GG   I ND      +G Y C ASNK G  +SE ++ 
Sbjct: 75  PFN---------LSDPRIIVSNNGGTFRIPNDGHISHFQGKYRCFASNKLGIAMSEEIEF 125

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +F  ++   +  +     +  C+PP   P ++ YW        +E+D+RV++S 
Sbjct: 126 IVPNAPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIEL-EHIEQDERVYMSQ 184

Query: 350 DGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPLKVFPH-----SNFQQLKFPN 401
            G LYF+ +E+ D+ N  C   +  ++    +  P    +    H     S+ + +   N
Sbjct: 185 KGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHVNDSSSSTEIISKAN 244

Query: 402 NF----PKTFPEAPKAG----------DKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
           +     P+     P++G          D + LEC A G P P  +W + G  LP+     
Sbjct: 245 SIKQRKPRLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETK 304

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           EN+ + L I NV  +D+G Y C ASN   +      ++++  P++T           +  
Sbjct: 305 ENYGKTLKIENVSSQDKGTYRCTASNVLGSATHDFQVTVEEPPHWTKKPQSGVYSTGSSG 364

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAM 562
              CEA G P+ T  W  NG       LP+E   R     +V++   I + N + +  A+
Sbjct: 365 ILLCEAEGEPEPTIKWRVNG-------LPIE---RNPYSGDVMSPGEISFTNVQPNHTAV 414

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFV 621
           YQC A N   T  ++A + VL ++P  +    + E YA   G +  + C   A+P+    
Sbjct: 415 YQCEATNVHGTILANANIDVLDVRPLIQT--ADEENYATVVGYSAFLHCEFFASPEAIVS 472

Query: 622 WKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           W+K        GRR  + ENG L I+  + +D+G YSC   N  G       L + +  S
Sbjct: 473 WQKVEEAKPLDGRRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATS 532

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINID 738
                P    +     L+L C +  +  L   +   W+ +G      ++N  E   I ID
Sbjct: 533 LRVS-PKNPRVPKSHTLELHCESQCDSHLKYSLKLSWSKDGEA---FEMNGTEDGRIIID 588

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
           G  L I+N +  D G Y C   + +  ++  T V V   P  P  + + E    S  + W
Sbjct: 589 GANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDPPENLHLSERQNRSVRLTW 648

Query: 799 TDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
             G  +   I+ Y +    N      W         +E+ R  G KE ++   L P+  Y
Sbjct: 649 EAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRY 698

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL   +QN 
Sbjct: 699 QFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNG 758

Query: 917 PNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+V+VQAIN +G GPE
Sbjct: 759 PGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPE 812

Query: 976 SE 977
            +
Sbjct: 813 PQ 814



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 142/595 (23%), Positives = 225/595 (37%), Gaps = 75/595 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI--LTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   G P+ RN Y  +      ++  NV+      Y C A+N    
Sbjct: 366 LLCEAEGEPEPTIKWRVNGLPIERNPYSGDVMSPGEISFTNVQPNHTAVYQCEATNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +  +    I   D+  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDV-LDVRPLIQTADE--ENYATVVGYSAFLHCEFFASPEAIVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PL D  RY + +N         E D   Y C  +N       +A L +     L + 
Sbjct: 478 EAKPL-DGRRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATSLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII---GSGGRRKIFENGNL 643
           P   K P   +++  E  +    C+       K  W KDG      G+   R I +  NL
Sbjct: 537 P---KNPRVPKSHTLEL-HCESQCDSHLKYSLKLSWSKDGEAFEMNGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIYSC+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             +   +++ YI    G +       EL      + G    +   S A    Y+   +  
Sbjct: 651 GDDHNSNISEYIVEFEGNKEEPGRWEEL----TRVQGKETTVV-LSLAPYVRYQFRVIAM 705

Query: 761 STVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKI 813
           + VG+   +  +   E PP  P      ++V         I+W          P   Y++
Sbjct: 706 NEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGLEYRV 765

Query: 814 IARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYG 869
                   TW      V  +E  V  +T R       V+ P  ++ Y+ +V A N LG G
Sbjct: 766 --------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVQVQAINHLGSG 810

Query: 870 EPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
               P PQ     +  D P  AP   G        + ++W  +P+E+ +     Y++ W 
Sbjct: 811 ----PEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNWW 866

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 867 KTKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|83304988|sp|O94856.4|NFASC_HUMAN RecName: Full=Neurofascin; Flags: Precursor
          Length = 1347

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 228/831 (27%), Positives = 355/831 (42%), Gaps = 80/831 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +    +K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI 658

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G 
Sbjct: 659 TDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGS 710

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++
Sbjct: 711 SHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR 770

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                  ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 771 -------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 814


>gi|357609885|gb|EHJ66734.1| neuroglian [Danaus plexippus]
          Length = 1273

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 215/805 (26%), Positives = 356/805 (44%), Gaps = 59/805 (7%)

Query: 190 PYFIKQPT--DVVFDLSKRSILND-ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  +KQPT  +++F +++   ++    + C A G P P Y W K     +          
Sbjct: 30  PRIVKQPTVEELLFQVAQPGEVDKPFIIECEAEGEPAPKYRWIKNGKSFEYTSY------ 83

Query: 247 SDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
            D R +     G L+++ PR  ED G Y C A N++G+  S SV +    +  F     P
Sbjct: 84  -DNRISQQPGRGTLVVSQPRN-EDLGQYQCFAYNEWGTATSNSVFVRKAELNSFKETDGP 141

Query: 305 E---IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE--EDKRVFVSYDGALYFSALE 359
           +      +     + C+PP  +P  N YW        ++   + R+ +  +G L+FS + 
Sbjct: 142 QKTITAQEGLPFKLTCEPPDGHPSPNVYWMLQGEQGQLKTINNSRMTLDPEGNLWFSNVT 201

Query: 360 QIDAG---NYSCNVQSKVSDTGRNGPFFPLKV-----FPHSNFQQLKFPNNFPKTFPEAP 411
           + DA     Y+C  +S   +  + G    L+V      P SN  Q      +     E  
Sbjct: 202 RFDASVDYAYTCAAKSVFRNEYKLGNKVYLQVQQTGISPTSNKHQPVL--QYATRRVEKA 259

Query: 412 KAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF--ENFNRILTIPNVKVEDQGEYICR 469
             G KV L C+  G P+P   W + G  +  +     +N+ + L I     EDQG Y C 
Sbjct: 260 WRGKKVELYCIYGGTPLPQVVWKKEGRTIISSQRITQDNYGKTLVIKRAGYEDQGTYTCE 319

Query: 470 ASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            SN     E+ S+ ++++A P F      +++         C A G P+ T SW  NG+ 
Sbjct: 320 VSNGVGTAETYSIQLNVEAAPFFIEEPQFQNLAEGETAVIQCRAGGTPEPTISWVHNGKP 379

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           +       E+  R  +  N +TI  L  ++D   Y C A N     Y    + V ++ P 
Sbjct: 380 IEQ----AENNPRRQVTANSITITDL-VKKDTGNYGCNATNSNGYVYKDVFINVQSIPPE 434

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV 648
            K+ P      AG      + C    AP+P   W +D +I  +GG+  I + G+L+I+ V
Sbjct: 435 IKEGPDNLTVVAGS--TAALRCRVFGAPRPIVRWMRD-DIDVTGGKYNITKEGDLVIADV 491

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           S  D G Y C A N  G   + G L V       ++ P    +AA  +   RC+A+ ++ 
Sbjct: 492 SFTDVGTYQCYAKNKFGEKSAFGSLTVKKRTVITDK-PEPYEVAAGSSATFRCNANADDS 550

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           L +  IW ++G  I   D +      I  D  LL I++ S  D+GEY C+ K+ + +   
Sbjct: 551 LKLDIIWLNDGQPI---DFDNQPRFRITNDYSLL-ISDTSELDSGEYTCIAKTAIDEARA 606

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVS 827
           + T+ V+  P  P  ++ +E H+ +AT++W     N  PI  Y I   T++    W   S
Sbjct: 607 QATLTVQDKPN-PPALEGIECHERTATLRWHSMGDNRAPILRYSIQYNTSFTPHAWDLAS 665

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
           ++V   +          S    L PW+ Y F+V A N++G   PSS S    T  D PY+
Sbjct: 666 DNVPAIDT---------SWTVQLSPWANYTFRVTASNKIGASAPSSHSDVCTTQPDVPYK 716

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGI 946
            P  + G G    ++ I+W  +P+ + N P  YY + W++  +   +  E ++++     
Sbjct: 717 NPDNVEGKGTDPTNMVITWSKMPQIEHNGPGFYYLVSWKRNISGAAWSEEQVRDWATTEY 776

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVG 971
            +   P+   +  Y++KV A+N  G
Sbjct: 777 VIPNTPT---FKPYKIKVIAVNSKG 798


>gi|329663127|ref|NP_001192470.1| neural cell adhesion molecule L1-like protein precursor [Bos
           taurus]
          Length = 1225

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 226/842 (26%), Positives = 368/842 (43%), Gaps = 86/842 (10%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           ++   I+ P  + + P  +KQ T  V F   +        + C A G P P + W K+D 
Sbjct: 20  KFSTAIDIPLSVQQVPTIVKQSTVQVAFPFDEY-----FQIECVAKGNPEPKFLWNKDDK 74

Query: 234 VQDRLVANLIDPLSDKRFTLS--GGNLII-NDPRQVEDRGSYHCKASNKFGSIISESVQL 290
             +         LSD R  +S  GG   I ND      +G Y C ASNK G  +SE ++ 
Sbjct: 75  PFN---------LSDPRIIVSNNGGTFRIPNDGHISHFQGKYRCFASNKLGIAMSEEIEF 125

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +F  ++   +  +     +  C+PP   P ++ YW        +E+D+RV++S 
Sbjct: 126 IVPNAPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIEL-EHIEQDERVYMSQ 184

Query: 350 DGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPLKVFPH-----SNFQQLKFPN 401
            G LYF+ +E+ D+ N  C   +  ++    +  P    +    H     S+ + +   N
Sbjct: 185 KGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHVNDSSSSTEIISKAN 244

Query: 402 NF----PKTFPEAPKAG----------DKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
           +     P+     P++G          D + LEC A G P P  +W + G  LP+     
Sbjct: 245 SIKQRKPRLLLPPPESGSESFVTILKGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETK 304

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           EN+ + L I NV  +D+G Y C ASN   +      ++++  P++T           +  
Sbjct: 305 ENYGKTLKIENVSSQDKGTYRCTASNVLGSATHDFQVTVEEPPHWTKKPQSGVYSTGSSG 364

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAM 562
              CEA G P+ T  W  NG       LP+E   R     +V++   I + N + +  A+
Sbjct: 365 ILLCEAEGEPEPTIKWRVNG-------LPIE---RNPYSGDVMSPGEISFTNVQPNHTAV 414

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFV 621
           YQC A N   T  ++A + VL ++P  +    + E YA   G +  + C   A+P+    
Sbjct: 415 YQCEATNVHGTILANANIDVLDVRPLIQT--ADEENYATVVGYSAFLHCEFFASPEAIVS 472

Query: 622 WKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           W+K        GRR  + ENG L I+  + +D+G YSC   N  G       L + +  S
Sbjct: 473 WQKVEEAKPLDGRRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATS 532

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINID 738
                P    +     L+L C +  +  L   +   W+ +G      ++N  E   I ID
Sbjct: 533 LRVS-PKNPRVPKSHTLELHCESQCDSHLKYSLKLSWSKDGEA---FEMNGTEDGRIIID 588

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
           G  L I+N +  D G Y C   + +  ++  T V V   P  P  + + E    S  + W
Sbjct: 589 GANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDPPENLHLSERQNRSVRLTW 648

Query: 799 TDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
             G  +   I+ Y +    N      W         +E+ R  G KE ++   L P+  Y
Sbjct: 649 EAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRY 698

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL   +QN 
Sbjct: 699 QFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNG 758

Query: 917 PNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+V+VQAIN +G GPE
Sbjct: 759 PGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPE 812

Query: 976 SE 977
            +
Sbjct: 813 PQ 814



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 142/595 (23%), Positives = 225/595 (37%), Gaps = 75/595 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI--LTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   G P+ RN Y  +      ++  NV+      Y C A+N    
Sbjct: 366 LLCEAEGEPEPTIKWRVNGLPIERNPYSGDVMSPGEISFTNVQPNHTAVYQCEATNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +  +    I   D+  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDV-LDVRPLIQTADE--ENYATVVGYSAFLHCEFFASPEAIVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PL D  RY + +N         E D   Y C  +N       +A L +     L + 
Sbjct: 478 EAKPL-DGRRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATSLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII---GSGGRRKIFENGNL 643
           P   K P   +++  E  +    C+       K  W KDG      G+   R I +  NL
Sbjct: 537 P---KNPRVPKSHTLEL-HCESQCDSHLKYSLKLSWSKDGEAFEMNGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIYSC+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 760
             +   +++ YI    G +       EL      + G    +   S A    Y+   +  
Sbjct: 651 GDDHNSNISEYIVEFEGNKEEPGRWEEL----TRVQGKETTVV-LSLAPYVRYQFRVIAM 705

Query: 761 STVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKI 813
           + VG+   +  +   E PP  P      ++V         I+W          P   Y++
Sbjct: 706 NEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGLEYRV 765

Query: 814 IARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYG 869
                   TW      V  +E  V  +T R       V+ P  ++ Y+ +V A N LG G
Sbjct: 766 --------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVQVQAINHLGSG 810

Query: 870 EPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
               P PQ     +  D P  AP   G        + ++W  +P+E+ +     Y++ W 
Sbjct: 811 ----PEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNWW 866

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 867 KTKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|410951587|ref|XP_003982476.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like protein-like [Felis catus]
          Length = 1208

 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 222/825 (26%), Positives = 355/825 (43%), Gaps = 65/825 (7%)

Query: 174 YQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED 232
           +++   IE P  + + P  IKQ    V F   +        + C A G P P++ W K+D
Sbjct: 17  FKFSTAIEIPLSVQQVPTIIKQSKVQVAFPFDEY-----FQIECEAKGNPEPTFMWTKDD 71

Query: 233 YVQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQ 289
              D         LSD R  +S   G   I N+      +G Y C ASNK G  +SE ++
Sbjct: 72  KTFD---------LSDSRIIVSNNSGTFKIPNEGHISHFQGKYRCFASNKLGVAMSEEIE 122

Query: 290 LAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347
                      KR  +      G  +   C+PP   P ++ YW        +E+D+RV++
Sbjct: 123 FIVPSKCSKIPKRKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIEL-EHIEQDERVYM 181

Query: 348 SYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKT 406
           S  G LYF+ +E+ D+ N Y C        T        L V   ++ +Q K     P +
Sbjct: 182 SQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIKQRKPRLLLPPS 241

Query: 407 FPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKV 460
              +  +     GD + LEC A G P P  +W + G  LP+     EN+ + L I NV  
Sbjct: 242 ESGSASSVTILKGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSY 301

Query: 461 EDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTY 520
            D+G Y C A+N   +      + ++  P +T           +     CEA G P+ T 
Sbjct: 302 RDRGNYRCTANNFLGSTSHDFHVVVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTL 361

Query: 521 SWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQL 580
            W  NG  ++      +      +    ++   L P    A+YQC A N   T  ++A +
Sbjct: 362 KWRVNGSPIDKNPFAGD-----VVSPTEISFTNLQPNHT-AVYQCEASNVHGTILANANI 415

Query: 581 RVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIF 638
            V+ ++P  +    + E YA   G +  + C   A+P+    W+K        GRR  I 
Sbjct: 416 DVVDVRPLIQTE--DEENYATVVGYSAFLHCEYFASPEAIVSWQKVDEAKPLEGRRYHIH 473

Query: 639 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNL 697
           ENG L I+  + DD+G YSC   N  G       L + +      Q+ PK   +     L
Sbjct: 474 ENGTLQINKTTEDDAGSYSCWVENAKGKTAVTANLDIRNATKL--QVSPKNPRVPKLHTL 531

Query: 698 QLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
           +L C +  +  L   +   W+ NG      ++N  E   I IDG  L I+N +  D G Y
Sbjct: 532 ELHCESKCDPYLKHSLKLSWSKNG---EGFEINATEDGRIIIDGPNLTISNVTSEDQGIY 588

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C  ++ +  ++  T V +   P  P  + + E    S  + W  G  +   I+ Y +  
Sbjct: 589 SCSAQTALDSVADVTHVTILDVPDPPENLHLSERQNRSVRLTWDAGNDHNSRISEYIVEF 648

Query: 816 RTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
             N      W         +E+ R  G++  ++ + L P+  Y+F+VIA NE+G  +PS 
Sbjct: 649 EGNKEEPGRW---------EELTRVQGKETTALLS-LAPYVRYQFRVIAVNEVGRSQPSQ 698

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TE 932
           PS  + TP   P + P  I     +  ++ I WEPL   +QN P + Y++ W+ +    E
Sbjct: 699 PSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVE 758

Query: 933 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
            + ET+  +       +R+ +   Y  Y+V+VQA+N +G GPE +
Sbjct: 759 XEEETVTNH------TLRVMTPTVYAPYDVQVQAVNHLGSGPEPQ 797



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 141/594 (23%), Positives = 225/594 (37%), Gaps = 73/594 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI--LTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+ +N +  +      ++  N++      Y C ASN    
Sbjct: 349 LLCEAEGEPEPTLKWRVNGSPIDKNPFAGDVVSPTEISFTNLQPNHTAVYQCEASNVHGT 408

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +  +    I   D+  +N A +        CE F  P+   SW +       
Sbjct: 409 ILANANIDV-VDVRPLIQTEDE--ENYATVVGYSAFLHCEYFASPEAIVSWQKV-----D 460

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE + RY I +N         E D   Y C  +N       +A L +     L + 
Sbjct: 461 EAKPLEGR-RYHIHENGTLQINKTTEDDAGSYSCWVENAKGKTAVTANLDIRNATKLQVS 519

Query: 587 PSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGN 642
           P   + P L +     E       C+P      K  W K+G    I  +   R I +  N
Sbjct: 520 PKNPRVPKLHTLELHCESK-----CDPYLKHSLKLSWSKNGEGFEINATEDGRIIIDGPN 574

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L IS V+ +D GIYSC+A            + +L  P   E L   ++   +R+++L   
Sbjct: 575 LTISNVTSEDQGIYSCSAQTALDSVADVTHVTILDVPDPPENL--HLSERQNRSVRLTWD 632

Query: 703 AHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
           A  +    ++ YI    G +       EL          LL +  A +    ++  +  +
Sbjct: 633 AGNDHNSRISEYIVEFEGNKEEPGRWEELTRVQGKETTALLSL--APYVRY-QFRVIAVN 689

Query: 762 TVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKII 814
            VG+   ++ +   E PP  P      ++V         I+W          P   Y++ 
Sbjct: 690 EVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV- 748

Query: 815 ARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGE 870
                  TW      V  +E  V  +T R       V+ P  ++ Y+ +V A N LG G 
Sbjct: 749 -------TWKPQGAPVEXEEETVTNHTLR-------VMTPTVYAPYDVQVQAVNHLGSG- 793

Query: 871 PSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
              P PQ     +  D P  AP   G        + +SW  +P+++ +     Y+I W K
Sbjct: 794 ---PEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVSWSTIPKDRVHGHLKGYQINWWK 850

Query: 928 KNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                      KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 851 TKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESE 904


>gi|317418927|emb|CBN80965.1| Neural cell adhesion molecule L1-like protein [Dicentrarchus
           labrax]
          Length = 1395

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 221/817 (27%), Positives = 359/817 (43%), Gaps = 99/817 (12%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRG 270
           ++C A G P P + W K             DP  D R      SG  +I N+    E +G
Sbjct: 62  MTCEAKGNPEPEFRWMKN--------GQEFDPFLDPRLMKEENSGTFVIPNNGNLTEYQG 113

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRA-PEIGNQNWGKAMFCDPPTNYPGVNYY 329
           +Y C ASNK G+ IS+ ++     + +F  +   P +  +     + CDPP   P +  Y
Sbjct: 114 TYRCYASNKLGTAISKEIEFIVPHVPKFPKETLDPVVVEEGQPFTLKCDPPKGIPPLQIY 173

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSC------------------NV 370
           W        +E+D+RV +  +G LYFS A+E+    +Y C                   V
Sbjct: 174 WMTISL-QHIEQDERVSMGLNGDLYFSHAVEKDSRRDYCCFAAFPRIRTIVQKNAMSVIV 232

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS 430
           Q+K SDT        L+  P      L  P++  ++  +  K  D ++LEC+A G+P P 
Sbjct: 233 QTKKSDTSPETANAILQRRP-----SLLTPSS-ERSETQLVKEED-LKLECIAEGFPTPQ 285

Query: 431 YNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 490
             W + G  LP  A  EN  ++L +P V+ ED G+Y+C+A N         T++I+  P 
Sbjct: 286 VEWVKVGHRLPIKAKLENHGKLLIVPRVEQEDSGKYMCKAKNALGEAVHYFTVTIEEPPE 345

Query: 491 FTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDN 547
           +      +     +D+   C A G P  T +W  NG       +PL++    +R  + D 
Sbjct: 346 WVSEPESQLSMIGSDVLIKCSASGTPQPTITWRVNG-------VPLQEAPAANRKVLGDT 398

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNV 606
           +L +R      D A+YQC A N+ +T  S+A + ++ L P    +  E E Y+  EG  V
Sbjct: 399 IL-LRNAKAS-DSAVYQCEASNRHRTLLSNANIMIMNLPPMILTK--EGEDYSAVEGKGV 454

Query: 607 TIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 665
            + C   ++P     W KD +     G R  + +NG+L I  V + D+G Y+C A N  G
Sbjct: 455 MMHCKVFSSPPSTVTWSKDDSSESVEGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEG 514

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIG 723
              +   ++ +  P+     P  + I      QL C A  +E    D+  +W  + + I 
Sbjct: 515 -SSAIDTMLYVKDPTRIVVPPEHLQILIGTTAQLSCLAEYDESFKNDIELLWEKDDMEIA 573

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP------ 777
              LN  E     ++ G+L+I N S  D G Y CV ++ V + +    +IV G       
Sbjct: 574 ---LNYTENSRYFVEDGILQIINVSHWDQGVYTCVARTPVDQDTASAWLIVLGELTYQQY 630

Query: 778 -------------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-ST 822
                        P  P  + + E    S  ++W  G  +    T + I    + W    
Sbjct: 631 FCSQAKGSDTPNVPDAPEYLVLSERKSKSVKLKWNPGDNHNSSTTEFIIEYEESQWEPGN 690

Query: 823 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
           W         KE+ R  G   +++   L     Y F+V   N +G G  S P+ +Y  PA
Sbjct: 691 W---------KELLRVPGNHNSAVLK-LHGNVDYCFRVSGVNSVGRGPSSEPTERYKPPA 740

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEY 941
             P + P  I   G    ++ I+WEPL   + N P + YK+ +R+++ + ++Q   +K +
Sbjct: 741 AAPDKNPENIKIEGHLAHEMDINWEPLLPIEHNGPGLEYKVSYRRQDLEEDWQEHMVKRH 800

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             V   V   P+   +  YE+K+QA N+ G GP+ ++
Sbjct: 801 SFV---VKNTPT---FVPYEIKIQAKNNQGWGPDPKI 831



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 149/388 (38%), Gaps = 51/388 (13%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           D+ L C A G+P P  EW K   V  RL      P+  K    + G L+I    + ED G
Sbjct: 271 DLKLECIAEGFPTPQVEWVK---VGHRL------PIKAK--LENHGKLLIVPRVEQEDSG 319

Query: 271 SYHCKASNKFGSII---SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGV 326
            Y CKA N  G  +   + +++    ++ E      PE      G  +      +  P  
Sbjct: 320 KYMCKAKNALGEAVHYFTVTIEEPPEWVSE------PESQLSMIGSDVLIKCSASGTPQP 373

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
              W  +  P          V  D  L  +A +  D+  Y C    + S+  R       
Sbjct: 374 TITWRVNGVPLQEAPAANRKVLGDTILLRNA-KASDSAVYQC----EASNRHRT------ 422

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPL---- 440
            +  ++N   +  P        E   A  G  V + C  F  P  +  W++  S      
Sbjct: 423 -LLSNANIMIMNLPPMILTKEGEDYSAVEGKGVMMHCKVFSSPPSTVTWSKDDSSESVEG 481

Query: 441 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
           PR A  +N +  L I +V+  D G+Y C A N   +      + ++      +P   +H+
Sbjct: 482 PRFAVHDNGS--LEIYSVEKGDTGQYTCLAKNTEGSSAIDTMLYVKDPTRIVVP--PEHL 537

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSE-----TLPLEDQDRYFIQDNVLTIRYLN 555
             Q  +  T +   + +   S+  + ELL  +      L   +  RYF++D +L I  ++
Sbjct: 538 --QILIGTTAQLSCLAEYDESFKNDIELLWEKDDMEIALNYTENSRYFVEDGILQIINVS 595

Query: 556 PERDPAMYQCRAKNQLKTRYSSAQLRVL 583
              D  +Y C A+  +    +SA L VL
Sbjct: 596 -HWDQGVYTCVARTPVDQDTASAWLIVL 622



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 107/279 (38%), Gaps = 45/279 (16%)

Query: 208 ILNDITLSCYAGGYPNPSYEWFKEDY-VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           I +D+ + C A G P P+  W      +Q+   AN        R  L  G+ I+    + 
Sbjct: 357 IGSDVLIKCSASGTPQPTITWRVNGVPLQEAPAAN--------RKVL--GDTILLRNAKA 406

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN-QNWGKAMFCDPPTNYPG 325
            D   Y C+ASN+  +++S +  +          K   +    +  G  M C   ++ P 
Sbjct: 407 SDSAVYQCEASNRHRTLLSNANIMIMNLPPMILTKEGEDYSAVEGKGVMMHCKVFSSPPS 466

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF- 384
               W++D     V E  R  V  +G+L   ++E+ D G Y+C  ++    +  +   + 
Sbjct: 467 -TVTWSKDDSSESV-EGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEGSSAIDTMLYV 524

Query: 385 --PLK-VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-----FGYPVPSYNWTRR 436
             P + V P  + Q L                G   +L C+A     F   +    W + 
Sbjct: 525 KDPTRIVVPPEHLQIL---------------IGTTAQLSCLAEYDESFKNDI-ELLWEKD 568

Query: 437 GSPLPRNAYFENF-----NRILTIPNVKVEDQGEYICRA 470
              +  N Y EN      + IL I NV   DQG Y C A
Sbjct: 569 DMEIALN-YTENSRYFVEDGILQIINVSHWDQGVYTCVA 606


>gi|28373126|ref|NP_783302.1| contactin-4 isoform c [Homo sapiens]
 gi|119584278|gb|EAW63874.1| contactin 4, isoform CRA_b [Homo sapiens]
 gi|189067310|dbj|BAG37020.1| unnamed protein product [Homo sapiens]
          Length = 698

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 162/473 (34%), Positives = 237/473 (50%), Gaps = 16/473 (3%)

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           + ++ W C+A G P  TY W +NGE       PL  +DR  I+   L I  +N   D  M
Sbjct: 2   EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 53

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC A+N+    +S+A+L V+ + P F +  L+  T    GG V I C P+A+PKP + W
Sbjct: 54  YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 113

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           KK  +I+    R  I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+  
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 741
              P  + +    ++ L C    +  LD+ + W+ NG  I  + D +  E        G 
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 232

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
           L I N     AG+Y C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G
Sbjct: 233 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 292

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             N  PIT Y I ART ++  W  VS   + + +D   G+   +    L PW  YEF+ +
Sbjct: 293 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 347

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N +G GEPS PS +  T    P   P+ + GGGG   +L I+WE +P E QN     Y
Sbjct: 348 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 407

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            + +R      +    L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 408 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGP 459



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 130/583 (22%), Positives = 211/583 (36%), Gaps = 45/583 (7%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           + V  EC A G P P+Y W + G PL      +     L I  V + D G Y C A N  
Sbjct: 3   ENVFWECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKH 62

Query: 475 SALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  ++   
Sbjct: 63  GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDI--- 119

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
               L++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+       
Sbjct: 120 ----LKENERITISED-GNLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKDPTRVM 173

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-------GNL 643
             P   +   GE   +      + +    F W  +G++I        FE        G+L
Sbjct: 174 VPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDL 233

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I  +    +G Y C          +   LIV   P   E +           L  R   
Sbjct: 234 MIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGP 293

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
                + +  I       +G   ++ +  P + IDG     T        EYE   V  +
Sbjct: 294 DNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFRTVAAN 350

Query: 762 TVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKI 813
            +G     + S K       P   P  V      K+   I W    +   NGR    Y +
Sbjct: 351 VIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF-GYVV 409

Query: 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
             R      W      +   +  RY  R E+     + P+S +E KV   N  G G P S
Sbjct: 410 AFRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGEG-PFS 461

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
           P+    +  ++P + P+ I        D+ + W   P EK       Y++ + +  D E 
Sbjct: 462 PTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRHEDKEE 520

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 521 NARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 561



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 127/313 (40%), Gaps = 52/313 (16%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL---IINDPRQVEDRGSY 272
           C A G P P+Y+W K          N    L+  R  +  G L   I+N    + D G Y
Sbjct: 9   CKANGRPKPTYKWLK----------NGEPLLTRDRIQIEQGTLNITIVN----LSDAGMY 54

Query: 273 HCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNYPGVNYY 329
            C A NK G I S +         +F+   LKR   +  +  G+ +    P   P   Y 
Sbjct: 55  QCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLV--KVGGEVVIECKPKASPKPVYT 112

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF---PL 386
           W +    + ++E++R+ +S DG L    + + DAG+Y+C   +        G      P 
Sbjct: 113 WKKGR--DILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPT 170

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWTRRGSPLPRNA 444
           +V        +  P++   T       G+ + L C V   + +   + W+  G  +  + 
Sbjct: 171 RV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDR 216

Query: 445 YFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             ++F R+        L I N++++  G+Y+C        L ++  + ++  P     +T
Sbjct: 217 DGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVT 276

Query: 497 -DKHMDNQADLTW 508
            D+  D  A L+W
Sbjct: 277 IDEITDTTAQLSW 289


>gi|348578155|ref|XP_003474849.1| PREDICTED: neurofascin isoform 4 [Cavia porcellus]
          Length = 1239

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 233/855 (27%), Positives = 360/855 (42%), Gaps = 88/855 (10%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCY 217
           LH           G  IE    IP  P     + QP  +     K  I++   +I + C 
Sbjct: 10  LHTAFLLLLLLSLGSAIE----IPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECE 65

Query: 218 AGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHC 274
           A G P PS+ W +      R      DP    R     G L+I+     R  E  G Y C
Sbjct: 66  AKGNPAPSFHWTR----NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQC 119

Query: 275 KASNKFGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWA 331
            A NKFG+ +S  ++L         + NL   P +  +     + C+PP   P    +W 
Sbjct: 120 FARNKFGTALSNRIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWM 177

Query: 332 RDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390
                  + +DKRV   ++G LYFS  + Q    +YSCN +   + T +    F LKV  
Sbjct: 178 SSSM-EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 236

Query: 391 HSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFE 447
                +      +P+    +     G  + LEC+A G P P   W ++G  LP + A FE
Sbjct: 237 TRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFE 296

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
           NFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D  
Sbjct: 297 NFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGR 356

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567
             C A G P  T  W  NGE L S      + +R    D ++        R  A+YQC  
Sbjct: 357 LVCRANGNPKPTVQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNT 411

Query: 568 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 627
            N+     ++A + VL + P     P              + C    +P P   W K+G 
Sbjct: 412 SNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ 470

Query: 628 IIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
             GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   +
Sbjct: 471 --GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIFR 527

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLL 742
           +P    +     +QL C    +  L +   W  +   + IGN    E ++         L
Sbjct: 528 MPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMKKEDDS---------L 578

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVV 787
            I   +  D G Y CV  + + +   K  + V               +G P  P  +++ 
Sbjct: 579 TIFGVAERDQGSYTCVASTELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLELT 638

Query: 788 EVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEAS 845
           ++ + S  + W  G  N  PIT Y +    +      W + S         ++ G   ++
Sbjct: 639 DLAERSVRLTWIPGDDNNSPITDYIVQFEEDQFQPGVWHDHS---------KFPGSVNSA 689

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
           +   L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+
Sbjct: 690 VLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 748

Query: 906 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 963
           W P+       PN+ Y + WR++       ET + + NV +   R  +     Y  YE++
Sbjct: 749 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 801

Query: 964 VQAINDVGPGPESEV 978
           VQA ND G GPE + 
Sbjct: 802 VQAENDFGKGPEPDT 816


>gi|281350365|gb|EFB25949.1| hypothetical protein PANDA_014328 [Ailuropoda melanoleuca]
          Length = 1195

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 213/798 (26%), Positives = 349/798 (43%), Gaps = 72/798 (9%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQVEDRG 270
           + C A G P P++ W K+D   D         LSD R   S   G   I N+      +G
Sbjct: 25  IECEAKGNPEPTFMWTKDDKPFD---------LSDSRIIASNNSGTFKIPNEGHISHFQG 75

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYY 329
            Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   P ++ Y
Sbjct: 76  KYRCFASNKLGVAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIY 135

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPL 386
           W        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  P    +
Sbjct: 136 WMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTV 194

Query: 387 KVFPHSN---------FQQLKFPNNFPKTFPEAPKAG----------DKVRLECVAFGYP 427
               H+N          +        P+     P++G          D + LEC A G P
Sbjct: 195 NSLRHANDSSSSTEIGSKANSIKQRKPRLLLPPPESGSESSVTILKGDTLLLECFAEGLP 254

Query: 428 VPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
            P  +W + G  LP+     EN+++ L I NV   D+G Y C A+N   +      + ++
Sbjct: 255 TPQVDWNKIGGDLPKGRETKENYSKTLKIENVSYRDRGNYRCTANNFLGSTTHDFHVIVE 314

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
             P +T           +     CEA G P+ T  W  NG  ++      +      +  
Sbjct: 315 EPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSPIDRNPFAGD-----VVSP 369

Query: 547 NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-N 605
             ++   L P    A+YQC A N   T  ++A + V+ ++P  +    + E YA   G +
Sbjct: 370 REISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTE--DEENYATVAGYS 426

Query: 606 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVH 664
             + C   A+P+    W+K        GRR  ++ENG L I+  + DD+G YSC   N  
Sbjct: 427 AFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHVYENGTLQINKTTEDDAGSYSCWVENAK 486

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA----HTEELLDVAYIWTHNGV 720
           G       L + +  +  +  P    +     L+L C +    H ++ L ++  W+ NG 
Sbjct: 487 GKTAVTANLDIRNA-TKLQVAPKNPRVPRLHALELHCESTCDPHLKQSLKLS--WSRNGE 543

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
                ++N  E   I IDG  L I+N +  D G Y C  ++ +  ++  T V V   P  
Sbjct: 544 A---FEINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDATQVTVLDVPDP 600

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           P  +Q+ E    S  + W  G  +   I+ Y +    N         E    +E+ R  G
Sbjct: 601 PESLQLSERQNRSVRLTWEAGDDHNSHISDYIVEFEGN-------KEEPGRWEELARVQG 653

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
            KE +I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  
Sbjct: 654 -KETTITLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPK 712

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
           ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  
Sbjct: 713 EMIIKWEPLKSMEQNGPGLEYRVSWKPQGAPVEWEEETVTNH------TLRVMTPTVYAP 766

Query: 960 YEVKVQAINDVGPGPESE 977
           Y+V+VQAIN +G GPE +
Sbjct: 767 YDVQVQAINHLGSGPEPQ 784


>gi|426333438|ref|XP_004028284.1| PREDICTED: neurofascin isoform 1 [Gorilla gorilla gorilla]
          Length = 1341

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 229/833 (27%), Positives = 354/833 (42%), Gaps = 84/833 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 128 EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 183

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 184 FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 241

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 242 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 298

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 299 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 358

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 359 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 418

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 419 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 478

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 479 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 533

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 534 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 590

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 649

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 650 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 700

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 701 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI 760

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+
Sbjct: 761 TDYVVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAINEV 810

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 811 GSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 870

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
           ++       ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 871 RR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 916


>gi|297662214|ref|XP_002809609.1| PREDICTED: neurofascin [Pongo abelii]
          Length = 1342

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 229/833 (27%), Positives = 354/833 (42%), Gaps = 84/833 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 128 EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 183

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 184 FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 241

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 242 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 298

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 299 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 358

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 359 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 418

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 419 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 478

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 479 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 533

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 534 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 590

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 649

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 650 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 700

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 701 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI 760

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+
Sbjct: 761 TDYVVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAINEV 810

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 811 GSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 870

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
           ++       ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 871 RR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 916


>gi|296230536|ref|XP_002760746.1| PREDICTED: neurofascin isoform 1 [Callithrix jacchus]
          Length = 1240

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 229/833 (27%), Positives = 354/833 (42%), Gaps = 84/833 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPIAQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 658

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+
Sbjct: 659 TDYVVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAINEV 708

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 709 GSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 768

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
           ++       ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 769 RR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 814


>gi|397504880|ref|XP_003823008.1| PREDICTED: neurofascin [Pan paniscus]
          Length = 1388

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 228/831 (27%), Positives = 354/831 (42%), Gaps = 80/831 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 175 EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 230

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 231 FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 288

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 289 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 345

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 346 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 405

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 406 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 465

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 466 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 525

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 526 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 580

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 581 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 637

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 638 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 696

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 697 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 747

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 748 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI 807

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G 
Sbjct: 808 TDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGS 859

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++
Sbjct: 860 SHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR 919

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                  ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 920 -------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 963


>gi|281341481|gb|EFB17065.1| hypothetical protein PANDA_006672 [Ailuropoda melanoleuca]
          Length = 1344

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 223/834 (26%), Positives = 358/834 (42%), Gaps = 84/834 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +        
Sbjct: 26  EIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN------- 78

Query: 239 VANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
            +   +   D R ++    G L+I+     R  +  G Y C A NKFG+ +S  ++L   
Sbjct: 79  -SKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEDYEGEYQCFARNKFGTALSNRIRLQVS 137

Query: 294 ---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 + NL   P +  +     + C+PP   P    +W        + +DKRV   ++
Sbjct: 138 KSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHN 194

Query: 351 GALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           G LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    
Sbjct: 195 GDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTAS 254

Query: 410 APKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEY 466
           +     G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY
Sbjct: 255 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEY 314

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
            C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NG
Sbjct: 315 FCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNG 374

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E L S      + +R    D ++        R  A+YQC   N+     ++A + VL + 
Sbjct: 375 EPLQSAP---RNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNL 643
           P     P              + C    +P P   W K+G   GS   GG   ++ENG+L
Sbjct: 430 PRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSL 486

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C  
Sbjct: 487 EIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIFRMPEDQVAKRGTTVQLECRV 545

Query: 704 HTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
             +  L +   W  +   + IGN    E ++         L I   +  D G Y C+  +
Sbjct: 546 KHDPSLKLTVTWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCIAST 596

Query: 762 TVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
            + +   K  + V               +G P  P  +++ ++ + S  + W  G  N  
Sbjct: 597 ELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNS 656

Query: 807 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           PIT Y +     +    F      +  +  ++ G   +++   L P+  Y+F+VIA NE+
Sbjct: 657 PITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEV 708

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 709 GSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 768

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++       ET + + NV +   R  + S   Y  YE++VQA ND G GPE + 
Sbjct: 769 RR-------ETRETWNNVTVWGSRYVVGSTPVYVPYEIRVQAENDFGKGPEPDT 815


>gi|332811712|ref|XP_003308755.1| PREDICTED: neurofascin isoform 1 [Pan troglodytes]
          Length = 1341

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 228/831 (27%), Positives = 354/831 (42%), Gaps = 80/831 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 128 EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 183

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 184 FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 241

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 242 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 298

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 299 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 358

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 359 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 418

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 419 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 478

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 479 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 533

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 534 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 590

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 649

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 650 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 700

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 701 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI 760

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G 
Sbjct: 761 TDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGS 812

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++
Sbjct: 813 SHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR 872

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                  ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 873 -------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 916


>gi|114585164|ref|XP_001136570.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Pan troglodytes]
          Length = 1209

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 228/847 (26%), Positives = 366/847 (43%), Gaps = 68/847 (8%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      +  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLLLGRGLIVSLIFFLL------KFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED---YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265
                + C A G P P + W K+    Y  D  +    +         SG   I N+   
Sbjct: 53  ---FQIECEAKGNPEPIFSWTKDGNPFYFTDHRIMTSNN---------SGTFRIPNEGHI 100

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
              +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   P
Sbjct: 101 SHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLP 160

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGPF 383
            ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T      
Sbjct: 161 PLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMP 219

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRGS 438
             L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + G 
Sbjct: 220 MKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGG 279

Query: 439 PLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD 497
            LP+     EN+ + L I NV  +D+G Y C ASN          + ++  P +T     
Sbjct: 280 DLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQS 339

Query: 498 KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 557
                 ++    CEA G P  T  W  NG  +++        D  F ++  ++   L P 
Sbjct: 340 AVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPN 394

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAP 616
              A+YQC A N   T  ++A + V+ ++P  + +  + E YA   G +  + C   A+P
Sbjct: 395 HT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASP 451

Query: 617 KPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           +    W+K   +    GRR  I+ENG L I+  + +D+G YSC   N  G       L +
Sbjct: 452 EAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDI 511

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETP 733
            +  +     P    I     L+L C +  +  L   +   W+ +G      ++N  E  
Sbjct: 512 RNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDG 567

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 793
            I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E    S
Sbjct: 568 RIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRS 627

Query: 794 ATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLV 851
             + W  GA +   I+ Y +    N      W         +E+ R  G+K   I   L 
Sbjct: 628 VRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LA 677

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P+  Y+F+VIA NE+G  +PS PS ++ TP   P + P  I     +  ++ I WEPL  
Sbjct: 678 PFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKS 737

Query: 912 EKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAIN +
Sbjct: 738 MEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQL 791

Query: 971 GPGPESE 977
           G GP+ +
Sbjct: 792 GSGPDPQ 798



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 410 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 462 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 521 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 576

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 577 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 634

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 635 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 691

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 692 VGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 749

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 750 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 794

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 795 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWKT 852

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 853 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|387539242|gb|AFJ70248.1| neurofascin isoform 1 precursor [Macaca mulatta]
          Length = 1238

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 229/833 (27%), Positives = 354/833 (42%), Gaps = 84/833 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 658

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+
Sbjct: 659 TDYVVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAVNEV 708

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 709 GSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 768

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
           ++       ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 769 RR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 814


>gi|355782631|gb|EHH64552.1| hypothetical protein EGM_17797 [Macaca fascicularis]
          Length = 1345

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 232/849 (27%), Positives = 359/849 (42%), Gaps = 84/849 (9%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILN---DITLSCYAGG 220
           L  LL+  R  +  MD       P     + QP  +     K  I++   +I + C A G
Sbjct: 15  LLCLLSLGRAIEIPMD-------PLCTVAVTQPPTITKQSVKDHIVDPRDNILIECEAKG 67

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKAS 277
            P PS+ W +      R      DP    R     G L+I+     R  E  G Y C A 
Sbjct: 68  NPAPSFHWTR----NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFAR 121

Query: 278 NKFGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDY 334
           NKFG+ +S  ++L         + NL   P +  +     + C+PP   P    +W    
Sbjct: 122 NKFGTALSNRIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSS 179

Query: 335 FPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393
               + +DKRV   ++G LYFS  + Q    +YSCN +   + T +    F LKV     
Sbjct: 180 M-EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRG 238

Query: 394 FQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFN 450
             +      +P+    +     G  + LEC+A G P P   W ++G  LP + A FENFN
Sbjct: 239 VAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFN 298

Query: 451 RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTC 510
           + L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C
Sbjct: 299 KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVC 358

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQ 570
            A G P  T  W  NGE L S      + +R    D ++        R  A+YQC   N+
Sbjct: 359 RANGNPKPTVQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNE 413

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 630
                ++A + VL + P     P              + C    +P P   W K+G   G
Sbjct: 414 HGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--G 470

Query: 631 S---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 687
           S   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P 
Sbjct: 471 SNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPE 529

Query: 688 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEIT 745
                    +QL C    +  L +   W  +   + IGN    E ++         L I 
Sbjct: 530 DQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIF 580

Query: 746 NASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVH 790
             +  D G Y CV  + + +   K  + V               +G P  P  +++ ++ 
Sbjct: 581 GVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLA 640

Query: 791 KTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           + S  + W  G  N  PIT Y +     +    F      +  +  +Y G   +++   L
Sbjct: 641 ERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-L 692

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y+F+VIA NE+G   PS PS +Y T    P   P  + G G +  ++ I+W P+ 
Sbjct: 693 SPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMN 752

Query: 911 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAIN 968
                 PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA N
Sbjct: 753 ATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAEN 805

Query: 969 DVGPGPESE 977
           D G GPE E
Sbjct: 806 DFGKGPEPE 814



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 169/698 (24%), Positives = 266/698 (38%), Gaps = 126/698 (18%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 290 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 342

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 343 --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 398

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 399 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLD--CPFFG 456

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 457 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 509

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 510 -AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 567

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG---PSYYEQLPPKI 689
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL     P+      PK 
Sbjct: 568 NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKG 626

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749
                R+L         EL D+A       VR+  +  ++  +P   I   +++     F
Sbjct: 627 RPDRPRDL---------ELTDLA----ERSVRLTWIPGDDNNSP---ITDYVVQFEEDQF 670

Query: 750 A-----DAGEYECVVKSTVGKIST------KTTVIVE-----------------GPP-GL 780
                 D  +Y   V S V ++S       +   + E                  PP   
Sbjct: 671 QPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESN 730

Query: 781 PGGVQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGK 833
           PG V+     K +  I WT  +  +   P   Y +       R  WN+     S +V+G+
Sbjct: 731 PGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQ 790

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
                          V VP   YE +V A N+ G G P   S    +  D P  AP+ + 
Sbjct: 791 T-------------PVYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVK 833

Query: 894 GGGGKIGDLSISWEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKE 940
                   +S+ W  + P   Q     Y   +WR            K+    F  + L+ 
Sbjct: 834 VRVMNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR- 892

Query: 941 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               G+ V R+   F Y+ Y++++  +N  G GP SE 
Sbjct: 893 ----GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 922


>gi|149058630|gb|EDM09787.1| neurofascin, isoform CRA_c [Rattus norvegicus]
          Length = 1250

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 229/841 (27%), Positives = 359/841 (42%), Gaps = 84/841 (9%)

Query: 173 TYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE 231
           ++  G  IE P  + + P   KQ   D + D       ++I + C A G P PS+ W + 
Sbjct: 34  SWSLGGAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNPAPSFHWTR- 87

Query: 232 DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESV 288
                R      DP    R     G L+I+     R  E  G Y C A NKFG+ +S  +
Sbjct: 88  ---NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRI 142

Query: 289 QLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV 345
           +L         + NL   P +  +     + C+PP   P    +W        + +DKRV
Sbjct: 143 RLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRV 199

Query: 346 FVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFP 404
              ++G LYFS  + Q    +YSCN +   + T +    F LKV       +      +P
Sbjct: 200 SQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYP 259

Query: 405 KTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVE 461
           +    +     G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  E
Sbjct: 260 QGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEE 319

Query: 462 DQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
           D GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  
Sbjct: 320 DSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ 379

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
           W  NG+ L S      + +R    D ++        R  A+YQC   N+     ++A + 
Sbjct: 380 WLVNGDPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVS 434

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIF 638
           VL + P     P              + C    +P P   W K+G   GS   GG   ++
Sbjct: 435 VLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVY 491

Query: 639 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
           ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +Q
Sbjct: 492 ENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQ 550

Query: 699 LRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
           L C    +  L +   W  +   + IGN    E ++         L I   +  D G Y 
Sbjct: 551 LECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYT 601

Query: 757 CVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDG 801
           C+  + + +   K  + V               +G P  P  +++ ++ + S  + W  G
Sbjct: 602 CMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPG 661

Query: 802 ATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
             N  PIT Y +    +      W + S         ++ G   +++ + L P+  Y+F+
Sbjct: 662 DDNNSPITDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLH-LSPYVNYQFR 711

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+
Sbjct: 712 VIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNL 771

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
            Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 772 RYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 824

Query: 978 V 978
            
Sbjct: 825 T 825


>gi|301765660|ref|XP_002918247.1| PREDICTED: neurofascin-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1237

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 224/836 (26%), Positives = 358/836 (42%), Gaps = 88/836 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +        
Sbjct: 26  EIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN------- 78

Query: 239 VANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
            +   +   D R ++    G L+I+     R  +  G Y C A NKFG+ +S  ++L   
Sbjct: 79  -SKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEDYEGEYQCFARNKFGTALSNRIRLQVS 137

Query: 294 ---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 + NL   P +  +     + C+PP   P    +W        + +DKRV   ++
Sbjct: 138 KSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHN 194

Query: 351 GALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           G LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    
Sbjct: 195 GDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTAS 254

Query: 410 APKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEY 466
           +     G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY
Sbjct: 255 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEY 314

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
            C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NG
Sbjct: 315 FCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNG 374

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E L S      + +R    D ++        R  A+YQC   N+     ++A + VL + 
Sbjct: 375 EPLQSAP---RNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVP 429

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNL 643
           P     P              + C    +P P   W K+G   GS   GG   ++ENG+L
Sbjct: 430 PRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSL 486

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C  
Sbjct: 487 EIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIFRMPEDQVAKRGTTVQLECRV 545

Query: 704 HTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
             +  L +   W  +   + IGN    E ++         L I   +  D G Y C+  +
Sbjct: 546 KHDPSLKLTVTWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCIAST 596

Query: 762 TVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
            + +   K  + V               +G P  P  +++ ++ + S  + W  G  N  
Sbjct: 597 ELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNS 656

Query: 807 PITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           PIT Y +    +      W + S         ++ G   +++   L P+  Y+F+VIA N
Sbjct: 657 PITDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLQ-LSPYVNYQFRVIAIN 706

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
           E+G   PS PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + 
Sbjct: 707 EVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVK 766

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           WR++       ET + + NV +   R  + S   Y  YE++VQA ND G GPE + 
Sbjct: 767 WRRR-------ETRETWNNVTVWGSRYVVGSTPVYVPYEIRVQAENDFGKGPEPDT 815


>gi|355558859|gb|EHH15639.1| hypothetical protein EGK_01754 [Macaca mulatta]
          Length = 1345

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 225/820 (27%), Positives = 350/820 (42%), Gaps = 77/820 (9%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP  +     K  I++   +I + C A G P PS+ W +      R      DP    
Sbjct: 37  VTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPRVSM 92

Query: 250 RFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNLKRA 303
           R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL   
Sbjct: 93  R--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLD-- 148

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
           P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + Q  
Sbjct: 149 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVMLQDM 207

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLE 420
             +YSCN +   + T +    F LKV       +      +P+    +     G  + LE
Sbjct: 208 QTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLE 267

Query: 421 CVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           C+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   ++  
Sbjct: 268 CIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRH 327

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
           ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S      + 
Sbjct: 328 TISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP---PNP 384

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           +R    D ++        R  A+YQC   N+     ++A + VL + P     P      
Sbjct: 385 NREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIR 441

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D GIY
Sbjct: 442 VILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIY 499

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +   W 
Sbjct: 500 TCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWL 558

Query: 717 HNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
            +   + IGN    E ++         L I   +  D G Y CV  + + +   K  + V
Sbjct: 559 KDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTV 609

Query: 775 ---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 819
                          +G P  P  +++ ++ + S  + W  G  N  PIT Y +     +
Sbjct: 610 LADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QF 665

Query: 820 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
               F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G   PS PS +Y 
Sbjct: 666 EEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYR 721

Query: 880 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK 939
           T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++       ET +
Sbjct: 722 TSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRE 774

Query: 940 EYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
            + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 775 AWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 814



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 169/698 (24%), Positives = 266/698 (38%), Gaps = 126/698 (18%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 290 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 342

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 343 --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 398

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 399 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLD--CPFFG 456

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 457 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 509

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 510 -AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 567

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG---PSYYEQLPPKI 689
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL     P+      PK 
Sbjct: 568 NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKG 626

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749
                R+L         EL D+A       VR+  +  ++  +P   I   +++     F
Sbjct: 627 RPDRPRDL---------ELTDLA----ERSVRLTWIPGDDNNSP---ITDYVVQFEEDQF 670

Query: 750 A-----DAGEYECVVKSTVGKIST------KTTVIVE-----------------GPP-GL 780
                 D  +Y   V S V ++S       +   + E                  PP   
Sbjct: 671 QPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESN 730

Query: 781 PGGVQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGK 833
           PG V+     K +  I WT  +  +   P   Y +       R  WN+     S +V+G+
Sbjct: 731 PGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQ 790

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
                          V VP   YE +V A N+ G G P   S    +  D P  AP+ + 
Sbjct: 791 T-------------PVYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVK 833

Query: 894 GGGGKIGDLSISWEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKE 940
                   +S+ W  + P   Q     Y   +WR            K+    F  + L+ 
Sbjct: 834 VRVMNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR- 892

Query: 941 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               G+ V R+   F Y+ Y++++  +N  G GP SE 
Sbjct: 893 ----GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 922


>gi|390477462|ref|XP_002760747.2| PREDICTED: neurofascin isoform 2 [Callithrix jacchus]
          Length = 1347

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 229/833 (27%), Positives = 354/833 (42%), Gaps = 84/833 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPIAQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 658

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+
Sbjct: 659 TDYVVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAINEV 708

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 709 GSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 768

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
           ++       ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 769 RR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 814


>gi|402857487|ref|XP_003893285.1| PREDICTED: neurofascin [Papio anubis]
          Length = 1446

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 228/831 (27%), Positives = 354/831 (42%), Gaps = 80/831 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 128 EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 183

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 184 FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 241

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 242 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 298

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 299 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 358

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 359 MVLRGMDLLLECIASGXPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 418

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 419 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 478

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 479 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 533

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 534 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 590

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 649

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 650 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 700

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 701 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 760

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G 
Sbjct: 761 TDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGS 812

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++
Sbjct: 813 SHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR 872

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                  ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 873 -------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 916



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 169/698 (24%), Positives = 266/698 (38%), Gaps = 126/698 (18%)

Query: 342  DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
            DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 392  DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 444

Query: 402  NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
              PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 445  --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 500

Query: 459  KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
            ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 501  QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLD--CPFFG 558

Query: 515  VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
             P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 559  SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 611

Query: 575  YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
             +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 612  -AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 669

Query: 633  GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG---PSYYEQLPPKI 689
             R K  E+ +L I  V+  D G Y+C A+     D +K  L VL     P+      PK 
Sbjct: 670  NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKG 728

Query: 690  TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749
                 R+L         EL D+A       VR+  +  ++  +P   I   +++     F
Sbjct: 729  RPDRPRDL---------ELTDLA----ERSVRLTWIPGDDNNSP---ITDYVVQFEEDQF 772

Query: 750  A-----DAGEYECVVKSTVGKIST------KTTVIVE-----------------GPP-GL 780
                  D  +Y   V S V ++S       +   + E                  PP   
Sbjct: 773  QPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESN 832

Query: 781  PGGVQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGK 833
            PG V+     K +  I WT  +  +   P   Y +       R  WN+     S +V+G+
Sbjct: 833  PGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQ 892

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
                           V VP   YE +V A N+ G G P   S    +  D P  AP+ + 
Sbjct: 893  T-------------PVYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVK 935

Query: 894  GGGGKIGDLSISWEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKE 940
                    +S+ W  + P   Q     Y   +WR            K+    F  + L+ 
Sbjct: 936  VRVMNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR- 994

Query: 941  YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                G+ V R+   F Y+ Y++++  +N  G GP SE 
Sbjct: 995  ----GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 1024


>gi|237858677|ref|NP_001153803.1| neurofascin isoform 2 precursor [Homo sapiens]
          Length = 1189

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 228/843 (27%), Positives = 358/843 (42%), Gaps = 100/843 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +    +K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATI 796
            G Y CV  + + +   K  + V               +G P  P  +++ ++ + S  +
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRL 657

Query: 797 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
            W  G  N  PIT Y +     +    F      +  +  +Y G   +++   L P+  Y
Sbjct: 658 TWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 709

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G   PS PS +Y T    P   P  + G G +  ++ I+W P+       
Sbjct: 710 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 769

Query: 917 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 974
           PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G GP
Sbjct: 770 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 822

Query: 975 ESE 977
           E E
Sbjct: 823 EPE 825


>gi|193787073|dbj|BAG51896.1| unnamed protein product [Homo sapiens]
          Length = 698

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 162/473 (34%), Positives = 237/473 (50%), Gaps = 16/473 (3%)

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           + ++ W C+A G P  TY W +NGE       PL  +DR  I+   L I  +N   D  M
Sbjct: 2   EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 53

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC A+N+    +S+A+L V+ + P F +  L+  T    GG V I C P+A+PKP + W
Sbjct: 54  YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 113

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           KK  +I+    R  I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+  
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 741
              P  + +    ++ L C    +  LD+ + W+ NG  I  + D +  E        G 
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 232

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
           L I N     AG+Y C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G
Sbjct: 233 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 292

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             N  PIT Y I ART ++  W  VS   + + +D   G+   +    L PW  YEF+ +
Sbjct: 293 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 347

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N +G GEPS PS +  T    P   P+ + GGGG   +L I+WE +P E QN     Y
Sbjct: 348 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 407

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            + +R      +    L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 408 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVSNNKGEGP 459



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 130/583 (22%), Positives = 211/583 (36%), Gaps = 45/583 (7%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           + V  EC A G P P+Y W + G PL      +     L I  V + D G Y C A N  
Sbjct: 3   ENVFWECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKH 62

Query: 475 SALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  ++   
Sbjct: 63  GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDI--- 119

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
               L++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+       
Sbjct: 120 ----LKENERITISED-GNLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKDPTRVM 173

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-------GNL 643
             P   +   GE   +      + +    F W  +G++I        FE        G+L
Sbjct: 174 VPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDL 233

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I  +    +G Y C          +   LIV   P   E +           L  R   
Sbjct: 234 MIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGP 293

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
                + +  I       +G   ++ +  P + IDG     T        EYE   V  +
Sbjct: 294 DNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFRTVAAN 350

Query: 762 TVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKI 813
            +G     + S K       P   P  V      K+   I W    +   NGR    Y +
Sbjct: 351 VIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF-GYVV 409

Query: 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
             R      W      +   +  RY  R E+     + P+S +E KV   N  G G P S
Sbjct: 410 AFRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVSNNKGEG-PFS 461

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
           P+    +  ++P + P+ I        D+ + W   P EK       Y++ + +  D E 
Sbjct: 462 PTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRHEDKEE 520

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 521 NARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 561



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 52/313 (16%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL---IINDPRQVEDRGSY 272
           C A G P P+Y+W K          N    L+  R  +  G L   I+N    + D G Y
Sbjct: 9   CKANGRPKPTYKWLK----------NGEPLLTRDRIQIEQGTLNITIVN----LSDAGMY 54

Query: 273 HCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNYPGVNYY 329
            C A NK G I S +         +F+   LKR   +  +  G+ +    P   P   Y 
Sbjct: 55  QCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLV--KVGGEVVIECKPKASPKPVYT 112

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPFFPL 386
           W +    + ++E++R+ +S DG L    + + DAG+Y+C   N     S TG      P 
Sbjct: 113 WKKGR--DILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPT 170

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWTRRGSPLPRNA 444
           +V        +  P++   T       G+ + L C V   + +   + W+  G  +  + 
Sbjct: 171 RV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDR 216

Query: 445 YFENFNRI--------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             ++F R+        L I N++++  G+Y+C        L ++  + ++  P     +T
Sbjct: 217 DGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVT 276

Query: 497 -DKHMDNQADLTW 508
            D+  D  A L+W
Sbjct: 277 IDEITDTTAQLSW 289


>gi|390475265|ref|XP_003734927.1| PREDICTED: contactin-4 [Callithrix jacchus]
          Length = 697

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 163/473 (34%), Positives = 239/473 (50%), Gaps = 17/473 (3%)

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           + ++ W C+A G P  TY W +NGE       PL  QDR  I+   L I  +N   D  M
Sbjct: 2   EENVFWECKANGRPKPTYRWLKNGE-------PLLTQDRIQIEQGTLNITVVNLS-DAGM 53

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC A+N+    +S+A+L V+ + P F +  L+  T    GG V I C P+A+PKP + W
Sbjct: 54  YQCLAENKHGVIFSNAELNVIAVGPDFSRTLLKRLTLVKVGGEVVIECKPKASPKPVYTW 113

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           KK  +I+    R  I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+  
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 741
              P  + +    ++ L C    +  LD+ + W+ NG  I  + D +  E    +  G L
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDL 232

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
           + I N     AG+Y C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G
Sbjct: 233 M-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 291

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             N  PIT Y I ART ++  W  VS   + + +D   G+   +    L PW  YEF+ +
Sbjct: 292 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 346

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N +G GEPS PS +  T    P   P+ + GGGG   +L I+WE +P E QN     Y
Sbjct: 347 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 406

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            + +R      +    L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 407 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGP 458



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 129/582 (22%), Positives = 211/582 (36%), Gaps = 44/582 (7%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           + V  EC A G P P+Y W + G PL      +     L I  V + D G Y C A N  
Sbjct: 3   ENVFWECKANGRPKPTYRWLKNGEPLLTQDRIQIEQGTLNITVVNLSDAGMYQCLAENKH 62

Query: 475 SALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + S+  +++ A  P+F+  L  +   +    ++   C+    P   Y+W +  ++   
Sbjct: 63  GVIFSNAELNVIAVGPDFSRTLLKRLTLVKVGGEVVIECKPKASPKPVYTWKKGRDI--- 119

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
               L++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+       
Sbjct: 120 ----LKENERITISED-GNLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKDPTRVM 173

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------GNLL 644
             P   +   GE   +      + +    F W  +G++I        FE       G+L+
Sbjct: 174 VPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDLM 233

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I  +    +G Y C          +   LIV   P   E +           L  R    
Sbjct: 234 IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPD 293

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKST 762
               + +  I       +G   ++ +  P + IDG     T        EYE   V  + 
Sbjct: 294 NHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFRTVAANV 350

Query: 763 VG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKII 814
           +G     + S K       P   P  V      K+   I W    +   NGR    Y + 
Sbjct: 351 IGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF-GYVVA 409

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
            R      W      +   +  RY  R E+     + P+S +E KV   N  G G P SP
Sbjct: 410 FRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG-PFSP 461

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           +    +  ++P + P+ I        D+ + W   P EK       Y++ + +  D E  
Sbjct: 462 TTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRHEDKEEN 520

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 521 ARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSS 560



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 124/309 (40%), Gaps = 45/309 (14%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCK 275
           C A G P P+Y W K          N    L+  R  +  G L I     + D G Y C 
Sbjct: 9   CKANGRPKPTYRWLK----------NGEPLLTQDRIQIEQGTLNIT-VVNLSDAGMYQCL 57

Query: 276 ASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR 332
           A NK G I S +         +F+   LKR   +  +  G+ +    P   P   Y W +
Sbjct: 58  AENKHGVIFSNAELNVIAVGPDFSRTLLKRLTLV--KVGGEVVIECKPKASPKPVYTWKK 115

Query: 333 DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF---PLKVF 389
               + ++E++R+ +S DG L    + + DAG+Y+C   +        G      P +V 
Sbjct: 116 GR--DILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRV- 172

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWTRRGSPLPRNAYFE 447
                  +  P++   T       G+ + L C V   + +   + W+  G  +  +   +
Sbjct: 173 -------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGD 219

Query: 448 NFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT-DKH 499
           +F R+       L I N++++  G+Y+C        L ++  + ++  P     +T D+ 
Sbjct: 220 HFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEI 279

Query: 500 MDNQADLTW 508
            D  A L+W
Sbjct: 280 TDTTAQLSW 288


>gi|441665521|ref|XP_003264957.2| PREDICTED: neural cell adhesion molecule L1-like protein [Nomascus
           leucogenys]
          Length = 1171

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 231/861 (26%), Positives = 369/861 (42%), Gaps = 80/861 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLLPGRGLIISLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED---YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265
                + C A G P P++ W K+    Y  D  +    D         SG   I N+   
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDGNPFYFTDHRIITSND---------SGTFRIPNEGHI 100

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
              +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   P
Sbjct: 101 SHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLP 160

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGP 382
            ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  P
Sbjct: 161 PLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMP 219

Query: 383 F-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLECV 422
               +    H+N               +Q K     P T   +  +     G+ + LEC 
Sbjct: 220 MKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECF 279

Query: 423 AFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN         
Sbjct: 280 AEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDF 339

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            + ++  P +T           ++    CEA G P  T  W  NG  +++        D 
Sbjct: 340 HVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GDV 396

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
            F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA 
Sbjct: 397 VFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYAT 451

Query: 602 EGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCT 659
             G N  + C   A+P+    W+K   +    GR+  I+ENG L I+  + DD+G YSC 
Sbjct: 452 VVGYNAFLHCEFFASPEAVVSWQKVEEVKPLEGRQYHIYENGTLQINRTTEDDAGSYSCW 511

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTH 717
             N  G       L + +  +     P    I     L+L C +  +  L   +   W+ 
Sbjct: 512 VENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSK 570

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V   
Sbjct: 571 DGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDV 627

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           P  P  + + E    S  + W  GA +   I+ Y +    N         E    +E+ R
Sbjct: 628 PDPPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGN-------KEEPGRWEELTR 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     
Sbjct: 681 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +   
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793

Query: 957 YTEYEVKVQAINDVGPGPESE 977
           Y  Y+VKVQAIN +G GPE +
Sbjct: 794 YAPYDVKVQAINQLGSGPEPQ 814



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYNAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGRQYHIYENGTLQINRTT-EDDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 811 --PEPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|350399166|ref|XP_003485439.1| PREDICTED: neuroglian-like isoform 2 [Bombus impatiens]
          Length = 1247

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 232/811 (28%), Positives = 359/811 (44%), Gaps = 57/811 (7%)

Query: 180 IENPDKIPRGPYFIKQPTD-VVFDLSKRSI-LND--ITLSCYAGGYPNPSYEWFKEDYVQ 235
           I++P +I + P     PTD  +F +++  I  ND    + C A G P P Y W K     
Sbjct: 19  IQSPPRISKQP-----PTDEQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNG--- 70

Query: 236 DRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                N   P  D R +     G L+I+ PR  ED G Y C A N++G   S SV +   
Sbjct: 71  ----KNFEWPAYDDRISQQPGRGTLVISRPRD-EDLGQYQCFAENEWGIATSNSVFVRKA 125

Query: 294 FIGEFNLKRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYD 350
            +  F  +    +  N+     + C PP  +P  N YW        ++   + R+ +  +
Sbjct: 126 ELNSFKDQNPISLDANEGQPFKLTCQPPDGWPKPNVYWLIQDTAGGIKSINNSRMTLDPE 185

Query: 351 GALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFP 404
           G L+FS + + DA +   Y+C   S   +  + G    L V     +  Q K+     + 
Sbjct: 186 GNLWFSNVTRNDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKYEPVKQYV 245

Query: 405 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVED 462
               E    G K+ L C+  G P+P   W++ G  +  N      N+ + L I +V  +D
Sbjct: 246 SRKNEVALRGKKIELYCIHGGTPLPQIVWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKD 305

Query: 463 QGEYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
           +G Y C ASN     +S S+ + + A P FTI     +      + + C A GVP     
Sbjct: 306 EGTYTCEASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETVEFKCAANGVPVPEIK 365

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
           W  NG+ + SE  P     R  +  N + I  L  ++D   Y C A N L   Y    + 
Sbjct: 366 WIHNGKPI-SEAPP---NPRRKVTPNSIIIEKLT-KKDTGNYGCNATNSLGYVYKDVYVN 420

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641
           VL L+P   + P +  T   +G  V I C    APKP   W ++G  + +GGR K  ++G
Sbjct: 421 VLALEPEITQPPADIATV--DGKIVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSG 477

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L I  V   D+G Y+C A+N  G  E+ G L V       ++ P    +AA      RC
Sbjct: 478 DLEIENVIFLDAGTYTCHASNKFGEIEASGNLAVKEHTRITDE-PEDYEVAAGSTATFRC 536

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
           +A T+  L +   W  NG  I   D  E+E   I      L IT  +  D G Y CV  +
Sbjct: 537 NAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMITKTTELDTGTYTCVAHT 592

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 821
            + +   + T++V+  P  P  V V     T+ATI WT    N  PI  Y I   T++  
Sbjct: 593 ELDEAKAQATLVVQDVPNPPKLVSV-NCAGTTATIHWTPMGDNRAPILRYTIQHNTSFTP 651

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
             + +S+  +           E + +  + PW+ Y F+V+A N++G   PS  S    T 
Sbjct: 652 DTWEISKDPVPS--------TEQTYDVPMSPWANYTFRVLAWNKIGPSLPSPHSDVCTTL 703

Query: 882 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKE 940
            D P+  P  + G G    +L ISW  +P+ + NAP   Y++++R+    E +  E + +
Sbjct: 704 QDVPFTNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDIHD 763

Query: 941 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +    + V   P+   Y  Y++KV AIN+ G
Sbjct: 764 WKKNSLVVDNQPT---YQRYKIKVVAINERG 791


>gi|432092484|gb|ELK25099.1| Neural cell adhesion molecule L1-like protein [Myotis davidii]
          Length = 1190

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 218/821 (26%), Positives = 355/821 (43%), Gaps = 72/821 (8%)

Query: 181 ENPDKIPRGPYFIKQPTD-VVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLV 239
           E P  +P+ P   KQ  + V F   +        + C A G P P + W K+    D   
Sbjct: 26  EIPLSVPQVPTITKQSKEQVAFPFDEY-----FQIECEAKGNPEPRFTWTKDGKPFD--- 77

Query: 240 ANLIDPLSDKRFTLS---GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 296
                 LSD R   S   G   I N+ +    +G Y C ASNK G  +SE ++     + 
Sbjct: 78  ------LSDPRVIASNNSGTFRIPNEGQIAHFQGKYRCFASNKLGVAMSEEIEFIVPNVP 131

Query: 297 EFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355
           +F  ++   +  +     +  C+PPT  P ++ YW        +++D+RV++S +G LYF
Sbjct: 132 KFPKEKIEPLEVEEGDPLVLPCNPPTGLPPLHIYWMNIEL-EHIQQDERVYMSQEGDLYF 190

Query: 356 SALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA- 413
           + +E+ D+ N Y C        T        L V   ++ +Q K P+         P++ 
Sbjct: 191 ANVEEHDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIKQRK-PSLLLPPVARGPESA 249

Query: 414 -----GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYI 467
                GD + LEC A G P P   W + G  LP+     EN+ ++L I NV  ED+G Y 
Sbjct: 250 VTVLRGDTLVLECFAEGLPTPQVGWEKVGGDLPKGRETKENYGKMLKIENVSYEDKGNYR 309

Query: 468 CRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
           C A+N          ++++  P +T          ++     CEA G P+    W  NG 
Sbjct: 310 CTANNFLGVATHDFHVTVEEPPRWTKKPQSGVYSTRSSGILLCEAEGEPEPVIRWRVNG- 368

Query: 528 LLNSETLPLEDQDRYFIQDNV----LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
                 +P+E+    F  D V    ++   L P    A+YQC A N   T  ++A + V+
Sbjct: 369 ------IPIEENP--FAGDVVSPGEVSFTDLQPNHT-AVYQCEASNAHGTILANANVDVV 419

Query: 584 TLKPSFKKRPLESETYAGEGGNVT-IFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENG 641
            ++P  +    + E+YA   G+   + C   A+P+    W+K D      G R  +  NG
Sbjct: 420 DVRPLIETE--DEESYAAVAGSSAFLLCEFFASPQAMVSWQKADAARPLEGPRYHVHTNG 477

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
            L I   + +D+G YSC   N  G       L + +  +  +  P    +     L+L C
Sbjct: 478 TLQIREATVEDAGAYSCWVENAQGKTAVTASLDIRNA-TRLQVSPRDPRVPRSHTLELHC 536

Query: 702 SAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 759
            +  +  L   +   W+  G      + N  E   I IDG  L I+N +  D G Y C  
Sbjct: 537 ESECDPHLKPSLRLTWSKGG---AAFETNGTEDGRILIDGAHLTISNLTLEDQGVYTCSA 593

Query: 760 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 819
            + +   + +T V V   P  P  +++ E    S  + W  G ++   I+ Y +    N 
Sbjct: 594 HTALDSAANETHVTVLDVPDPPENLRLSERQNRSVRLTWDAGDSHNSNISGYVVEFEGNR 653

Query: 820 N--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                W  ++    G          E ++   L P+  Y+F+VIA NE+G   PS PS  
Sbjct: 654 EEPGRWEQLAAVPGG----------ETTVLLTLAPYVRYQFRVIAANEVGRSRPSRPSEH 703

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSE 936
           + TP   P + P  +     +  ++ I WEPL   +QN P + Y++ W+      E++ E
Sbjct: 704 HETPPAAPDKNPQNVRVQASQPKEMVIRWEPLKSTEQNGPGLEYRVAWKPLGALGEWEEE 763

Query: 937 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           T++E+       +R+ +   Y  YEV+VQA+N +G GP+ +
Sbjct: 764 TVREHS------LRVMTPAIYAPYEVQVQALNHLGAGPQPQ 798


>gi|410036466|ref|XP_003950068.1| PREDICTED: contactin-4 [Pan troglodytes]
          Length = 697

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 163/475 (34%), Positives = 238/475 (50%), Gaps = 21/475 (4%)

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           + ++ W C+A G P  TY W +NGE       PL  +DR  I+   L I  +N   D  M
Sbjct: 2   EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 53

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC A+N+    +S+A+L V+ + P F +  L+  T    GG V I C P+A+PKP + W
Sbjct: 54  YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTW 113

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           KK  +I+    R  I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+  
Sbjct: 114 KKGRDIVKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--- 739
              P  + +    ++ L C    +  LD+ + W+ NG  I   D +    P   + G   
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI---DFDRDGDPYERVGGDSA 229

Query: 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
           G L I N     AG+Y C+V+++V ++S    +IV GPPG P  V + E+  T+A + W 
Sbjct: 230 GDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWR 289

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
            G  N  PIT Y I ART ++  W  VS   + + +D   G+   +    L PW  YEF+
Sbjct: 290 PGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFR 344

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
            +A N +G GEPS PS +  T    P   P+ + GGGG   +L I+WE +P E QN    
Sbjct: 345 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 404

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            Y + +R      +    L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 405 GYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGP 458



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 128/582 (21%), Positives = 211/582 (36%), Gaps = 44/582 (7%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           + V  EC A G P P+Y W + G PL      +     L I  V + D G Y C A N  
Sbjct: 3   ENVFWECKANGRPKPTYRWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKH 62

Query: 475 SALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  ++   
Sbjct: 63  GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTWKKGRDI--- 119

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
               +++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+       
Sbjct: 120 ----VKENERITISED-GNLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKDPTRVM 173

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------GNLL 644
             P   +   GE   +      + +    F W  +G++I        +E       G+L+
Sbjct: 174 VPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDPYERVGGDSAGDLM 233

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I  +    +G Y C          +   LIV   P   E +           L  R    
Sbjct: 234 IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPD 293

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKST 762
               + +  I       +G   ++ +  P + IDG     T        EYE   V  + 
Sbjct: 294 NHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFRTVAANV 350

Query: 763 VG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKII 814
           +G     + S K       P   P  V      K+   I W    +   NGR    Y + 
Sbjct: 351 IGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF-GYVVA 409

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
            R      W      +   +  RY  R E+     + P+S +E KV   N  G G P SP
Sbjct: 410 FRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGEG-PFSP 461

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           +    +  ++P + P+ I        D+ + W   P EK       Y++ + +  D E  
Sbjct: 462 TTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRHEDKEEN 520

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 521 ARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 560



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 55/314 (17%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL---IINDPRQVEDRGSY 272
           C A G P P+Y W K          N    L+  R  +  G L   I+N    + D G Y
Sbjct: 9   CKANGRPKPTYRWLK----------NGEPLLTRDRIQIEQGTLNITIVN----LSDAGMY 54

Query: 273 HCKASNKFGSIISESVQLAFGFIGEFN---LKRAP--EIGNQNWGKAMFCDPPTNYPGVN 327
            C A NK G I S +         +F+   LKR    ++G +    A+ C P  + P   
Sbjct: 55  QCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGE---VAIECKPKAS-PKPV 110

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF--- 384
           Y W +    + V+E++R+ +S DG L    + + DAG+Y+C   +        G      
Sbjct: 111 YTWKKGR--DIVKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKD 168

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWTRRGSPLPR 442
           P +V        +  P++   T       G+ + L C V   + +   + W+  G  +  
Sbjct: 169 PTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVFTWSFNGHLIDF 214

Query: 443 NAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
           +   + + R+       L I N++++  G+Y+C        L ++  + ++  P     +
Sbjct: 215 DRDGDPYERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAV 274

Query: 496 T-DKHMDNQADLTW 508
           T D+  D  A L+W
Sbjct: 275 TIDEITDTTAQLSW 288


>gi|148707722|gb|EDL39669.1| neurofascin, isoform CRA_a [Mus musculus]
          Length = 1195

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 229/847 (27%), Positives = 363/847 (42%), Gaps = 106/847 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 44  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 99

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 100 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 157

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 158 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 214

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 215 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 274

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP N A FENFN+ L I NV 
Sbjct: 275 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNVS 334

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 335 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 394

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 395 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 446

Query: 577 SAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-- 631
           +A + VL + P   S + + +    Y        + C    +P P   W K+G   GS  
Sbjct: 447 NAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPIPTLRWFKNGQ--GSNL 500

Query: 632 -GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 690
            GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P    
Sbjct: 501 DGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQV 559

Query: 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNAS 748
                 +QL C    +  L +   W  +   + IGN    E ++         L I   +
Sbjct: 560 AKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVA 610

Query: 749 FADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTS 793
             D G Y C+  + + +   K  + V               +G P  P  +++ ++ + S
Sbjct: 611 ERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERS 670

Query: 794 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
             + W  G  N  PIT Y +     +    F      +  +  R+ G   +++ + L P+
Sbjct: 671 VRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNSAVLH-LSPY 722

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
             Y+F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+W P+    
Sbjct: 723 VNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATS 782

Query: 914 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVG 971
              PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G
Sbjct: 783 AFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFG 835

Query: 972 PGPESEV 978
            GPE + 
Sbjct: 836 KGPEPDT 842


>gi|149058634|gb|EDM09791.1| neurofascin, isoform CRA_g [Rattus norvegicus]
          Length = 1234

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 224/824 (27%), Positives = 353/824 (42%), Gaps = 77/824 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NG+ L S     
Sbjct: 319 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAP--- 375

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 376 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 432

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 433 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 490

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +  
Sbjct: 491 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTV 549

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + IGN    E ++         L I   +  D G Y C+  + + +   K  
Sbjct: 550 SWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAY 600

Query: 772 VIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
           + V               +G P  P  +++ ++ + S  + W  G  N  PIT Y +   
Sbjct: 601 LTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV--- 657

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             +    F      +  +  ++ G   +++ + L P+  Y+F+VIA NE+G   PS PS 
Sbjct: 658 -QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSE 712

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 936
           +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++       E
Sbjct: 713 RYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------E 765

Query: 937 TLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           T + + NV +   R  +     Y  YE++VQA ND G GPE E 
Sbjct: 766 TRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPET 809


>gi|348578149|ref|XP_003474846.1| PREDICTED: neurofascin isoform 1 [Cavia porcellus]
          Length = 1190

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 234/870 (26%), Positives = 365/870 (41%), Gaps = 107/870 (12%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH           G  IE P  + + P   KQ   D + D       ++I + C A G P
Sbjct: 10  LHTAFLLLLLLSLGSAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNP 64

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNK 279
            PS+ W +      R      DP    R     G L+I+     R  E  G Y C A NK
Sbjct: 65  APSFHWTR----NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNK 118

Query: 280 FGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           FG+ +S  ++L         + NL   P +  +     + C+PP   P    +W      
Sbjct: 119 FGTALSNRIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM- 175

Query: 337 NFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHS 392
             + +DKRV   ++G LYFS  + Q    +YSCN +   + T +    F LKV    P++
Sbjct: 176 EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN 235

Query: 393 NFQQLKFPNNFPK----------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRR 436
           +      P+ +             +P+   +      G  + LEC+A G P P   W ++
Sbjct: 236 DSSLRNHPDMYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKK 295

Query: 437 GSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
           G  LP + A FENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +    
Sbjct: 296 GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP 355

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIR 552
            +  +    D    C A G P  T  W  NGE L S       +   D    +D  ++ R
Sbjct: 356 KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR 415

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
                   A+YQC   N+     ++A + VL + P     P              + C  
Sbjct: 416 --------AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPF 466

Query: 613 EAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K+G   GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E+
Sbjct: 467 FGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAEN 524

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDL 727
           + RL V   P+   ++P    +     +QL C    +  L +   W  +   + IGN   
Sbjct: 525 QVRLEV-KDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMK 583

Query: 728 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------- 774
            E ++         L I   +  D G Y CV  + + +   K  + V             
Sbjct: 584 KEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLADQATPTNRLAA 634

Query: 775 --EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHV 830
             +G P  P  +++ ++ + S  + W  G  N  PIT Y +    +      W + S   
Sbjct: 635 LPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDQFQPGVWHDHS--- 691

Query: 831 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
                 ++ G   +++   L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS
Sbjct: 692 ------KFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPS 744

Query: 891 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 950
            + G G +  ++ I+W P+       PN+ Y + WR++       ET + + NV +   R
Sbjct: 745 DVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSR 797

Query: 951 --IPSEFYYTEYEVKVQAINDVGPGPESEV 978
             +     Y  YE++VQA ND G GPE + 
Sbjct: 798 YVVGQTPVYVPYEIRVQAENDFGKGPEPDT 827


>gi|149058633|gb|EDM09790.1| neurofascin, isoform CRA_f [Rattus norvegicus]
          Length = 1336

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 224/824 (27%), Positives = 353/824 (42%), Gaps = 77/824 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NG+ L S     
Sbjct: 319 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPLQSAP--- 375

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 376 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 432

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 433 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 490

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +  
Sbjct: 491 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTV 549

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + IGN    E ++         L I   +  D G Y C+  + + +   K  
Sbjct: 550 SWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAY 600

Query: 772 VIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
           + V               +G P  P  +++ ++ + S  + W  G  N  PIT Y +   
Sbjct: 601 LTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV--- 657

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             +    F      +  +  ++ G   +++ + L P+  Y+F+VIA NE+G   PS PS 
Sbjct: 658 -QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSE 712

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 936
           +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++       E
Sbjct: 713 RYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------E 765

Query: 937 TLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           T + + NV +   R  +     Y  YE++VQA ND G GPE E 
Sbjct: 766 TRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPET 809


>gi|345786242|ref|XP_533760.3| PREDICTED: neural cell adhesion molecule L1-like protein [Canis
           lupus familiaris]
          Length = 1225

 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 222/839 (26%), Positives = 359/839 (42%), Gaps = 80/839 (9%)

Query: 175 QYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           ++   +E P  + + P  +KQ    V F   +        + C A G P P++ W K+D 
Sbjct: 20  KFSTAMEIPLSVQQVPTIVKQSKVQVAFPFDEY-----FQIECEAKGNPEPTFAWTKDDK 74

Query: 234 VQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL 290
             D         LSD R  +S   G   I N+      +G Y C ASNK G  +SE ++ 
Sbjct: 75  PFD---------LSDSRIIVSNNSGTFKIPNEGHISHFQGKYRCFASNKLGVAMSEEIEF 125

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
               + +F  ++   +  +     +  C+PP   P ++ YW        +E+D+RV++S 
Sbjct: 126 IVPNVPKFPKEKIDPLEVEEGDPIVLQCNPPKGLPPLHIYWMNIEL-EHIEQDERVYMSQ 184

Query: 350 DGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPLKVFPHSN------------- 393
            G LYF+ +E+ D+ N  C   +  ++    +  P    +    H+N             
Sbjct: 185 KGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLRHANDSSSSTEIGSKAN 244

Query: 394 -FQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF- 446
             +Q K     P     +        GD + LEC A G P P  +W + G  LP+     
Sbjct: 245 SIKQRKPRLLLPPVESGSESTVTILKGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETK 304

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           EN+ + L I NV   D+G Y C A+N   +      + ++  P++T           +  
Sbjct: 305 ENYGKTLKIENVSYRDRGNYRCTANNFLGSTTHDFHVIVEEPPHWTKKPQSGVYSTGSSG 364

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
              CEA G P+ T  W  NG  ++      +      +    ++   L P    A+YQC 
Sbjct: 365 ILLCEAEGEPEPTIKWRVNGSPIDKNPFAGD-----VVSPGEISFTNLQPNHT-AVYQCE 418

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKD 625
           A N   T  ++A + V+ ++P  +    + E YA   G +  + C   A+P P   W+K 
Sbjct: 419 ASNVHGTILANANIDVVDVRPLIQTE--DEEHYATVVGYSAFLHCEFFASPDPVVSWQKV 476

Query: 626 GNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
                  GRR  I ENG L I+  + DD+G YSC   N  G       L + +      Q
Sbjct: 477 DEAKPLEGRRYHIHENGTLQINKTTEDDAGSYSCWVENAKGKTAVTANLDIRNATKL--Q 534

Query: 685 LPPK-ITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGL 741
           + PK   +     L+L C +  +  L   +   W+ NG      ++N  E   I IDG  
Sbjct: 535 VSPKNPRVPKLHTLELHCESTCDPHLRHSLKLSWSKNGEA---FEINATEDGRIIIDGAN 591

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
           L I+N +  D G Y C  ++ +  ++  T V V   P  P  + + E    S  + W  G
Sbjct: 592 LTISNVTSEDQGIYSCSAQTALDSVTDVTQVTVLDVPDPPENLHLSERQNRSVRLTWEAG 651

Query: 802 ATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
             +   I+ Y +    N      W         +E+ R  G KE ++   L P+  Y+F+
Sbjct: 652 DDHNSHISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVMLSLAPYVRYQFR 701

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL   +QN P +
Sbjct: 702 VIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGL 761

Query: 920 YYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
            Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+V+VQAIN +G GPE +
Sbjct: 762 EYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINHLGSGPEPQ 814


>gi|237858630|ref|NP_001153788.1| neurofascin isoform 2 precursor [Mus musculus]
          Length = 1189

 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 229/847 (27%), Positives = 363/847 (42%), Gaps = 106/847 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP N A FENFN+ L I NV 
Sbjct: 259 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-- 631
           +A + VL + P   S + + +    Y        + C    +P P   W K+G   GS  
Sbjct: 431 NAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPIPTLRWFKNGQ--GSNL 484

Query: 632 -GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 690
            GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P    
Sbjct: 485 DGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQV 543

Query: 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNAS 748
                 +QL C    +  L +   W  +   + IGN    E ++         L I   +
Sbjct: 544 AKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVA 594

Query: 749 FADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTS 793
             D G Y C+  + + +   K  + V               +G P  P  +++ ++ + S
Sbjct: 595 ERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERS 654

Query: 794 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
             + W  G  N  PIT Y +     +    F      +  +  R+ G   +++ + L P+
Sbjct: 655 VRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNSAVLH-LSPY 706

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
             Y+F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+W P+    
Sbjct: 707 VNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATS 766

Query: 914 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVG 971
              PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G
Sbjct: 767 AFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFG 819

Query: 972 PGPESEV 978
            GPE + 
Sbjct: 820 KGPEPDT 826


>gi|410986303|ref|XP_003999450.1| PREDICTED: neurofascin isoform 2 [Felis catus]
          Length = 1244

 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 227/834 (27%), Positives = 355/834 (42%), Gaps = 84/834 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 27  EIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 82

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 83  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 140

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 141 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 197

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 198 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTASSQ 257

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 258 MVLRGMDLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 317

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 318 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 377

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 378 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 432

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 433 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 489

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 490 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 548

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 549 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 599

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 600 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 659

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         ++ G   +++   L P+  Y+F+VIA NE+
Sbjct: 660 TDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLQ-LSPYVNYQFRVIAINEV 709

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 710 GSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 769

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++       ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 770 RR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 816


>gi|237858623|ref|NP_001153786.1| neurofascin isoform 1 precursor [Rattus norvegicus]
 gi|38372259|sp|P97685.2|NFASC_RAT RecName: Full=Neurofascin; Flags: Precursor
          Length = 1240

 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 226/832 (27%), Positives = 356/832 (42%), Gaps = 80/832 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NG+ 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y C+  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCMASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 658

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  ++ G   +++ + L P+  Y+F+VIA NE+G 
Sbjct: 659 TDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGS 710

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++
Sbjct: 711 SHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR 770

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                  ET + + NV +   R  +     Y  YE++VQA ND G GPE E 
Sbjct: 771 -------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPET 815


>gi|332688247|ref|NP_001193885.1| contactin-4 isoform d [Homo sapiens]
 gi|19913548|gb|AAH26119.1| Contactin 4 [Homo sapiens]
          Length = 697

 Score =  259 bits (662), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 162/473 (34%), Positives = 239/473 (50%), Gaps = 17/473 (3%)

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           + ++ W C+A G P  TY W +NGE       PL  +DR  I+   L I  +N   D  M
Sbjct: 2   EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 53

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC A+N+    +S+A+L V+ + P F +  L+  T    GG V I C P+A+PKP + W
Sbjct: 54  YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 113

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           KK  +I+    R  I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+  
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 741
              P  + +    ++ L C    +  LD+ + W+ NG  I  + D +  E    +  G L
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDL 232

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
           + I N     AG+Y C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G
Sbjct: 233 M-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 291

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             N  PIT Y I ART ++  W  VS   + + +D   G+   +    L PW  YEF+ +
Sbjct: 292 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 346

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N +G GEPS PS +  T    P   P+ + GGGG   +L I+WE +P E QN     Y
Sbjct: 347 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 406

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            + +R      +    L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 407 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGP 458



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 130/582 (22%), Positives = 211/582 (36%), Gaps = 44/582 (7%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           + V  EC A G P P+Y W + G PL      +     L I  V + D G Y C A N  
Sbjct: 3   ENVFWECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKH 62

Query: 475 SALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  ++   
Sbjct: 63  GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDI--- 119

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
               L++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+       
Sbjct: 120 ----LKENERITISED-GNLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKDPTRVM 173

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------GNLL 644
             P   +   GE   +      + +    F W  +G++I        FE       G+L+
Sbjct: 174 VPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDLM 233

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I  +    +G Y C          +   LIV   P   E +           L  R    
Sbjct: 234 IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPD 293

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKST 762
               + +  I       +G   ++ +  P + IDG     T        EYE   V  + 
Sbjct: 294 NHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFRTVAANV 350

Query: 763 VG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKII 814
           +G     + S K       P   P  V      K+   I W    +   NGR    Y + 
Sbjct: 351 IGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF-GYVVA 409

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
            R      W      +   +  RY  R E+     + P+S +E KV   N  G G P SP
Sbjct: 410 FRPYGKMIWMLTV--LASADASRYVFRNES-----VHPFSPFEVKVGVFNNKGEG-PFSP 461

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           +    +  ++P + P+ I        D+ + W   P EK       Y++ + +  D E  
Sbjct: 462 TTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRHEDKEEN 520

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           +  ++  GN      +I +      Y + V+A N  G GP S
Sbjct: 521 ARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGTGPSS 560



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 127/312 (40%), Gaps = 51/312 (16%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL---IINDPRQVEDRGSY 272
           C A G P P+Y+W K          N    L+  R  +  G L   I+N    + D G Y
Sbjct: 9   CKANGRPKPTYKWLK----------NGEPLLTRDRIQIEQGTLNITIVN----LSDAGMY 54

Query: 273 HCKASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNYPGVNYY 329
            C A NK G I S +         +F+   LKR   +  +  G+ +    P   P   Y 
Sbjct: 55  QCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLV--KVGGEVVIECKPKASPKPVYT 112

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF---PL 386
           W +    + ++E++R+ +S DG L    + + DAG+Y+C   +        G      P 
Sbjct: 113 WKKGR--DILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPT 170

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWTRRGSPLPRNA 444
           +V        +  P++   T       G+ + L C V   + +   + W+  G  +  + 
Sbjct: 171 RV--------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDR 216

Query: 445 YFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT- 496
             ++F R+       L I N++++  G+Y+C        L ++  + ++  P     +T 
Sbjct: 217 DGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTI 276

Query: 497 DKHMDNQADLTW 508
           D+  D  A L+W
Sbjct: 277 DEITDTTAQLSW 288


>gi|354478083|ref|XP_003501245.1| PREDICTED: neurofascin isoform 3 [Cricetulus griseus]
          Length = 1240

 Score =  259 bits (662), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 227/834 (27%), Positives = 356/834 (42%), Gaps = 84/834 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVSERTPSFMYPQGTSSSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP +   FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKTKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P    +     +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVVKRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y C+  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCMASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 658

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y I    +      W + S         ++ G   +++ + L P+  Y+F+VIA NE+
Sbjct: 659 TDYVIQFEEDQFQPGVWHDHS---------KFPGSVNSAVLH-LSPYVNYQFRVIAVNEV 708

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 709 GSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 768

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++       ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 769 RR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 815


>gi|410986305|ref|XP_003999451.1| PREDICTED: neurofascin isoform 3 [Felis catus]
          Length = 1351

 Score =  259 bits (662), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 226/832 (27%), Positives = 355/832 (42%), Gaps = 80/832 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 27  EIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 82

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 83  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 140

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 141 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 197

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 198 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTASSQ 257

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 258 MVLRGMDLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 317

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 318 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 377

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 378 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 432

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 433 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 489

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 490 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 548

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 549 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 599

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 600 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 659

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  ++ G   +++   L P+  Y+F+VIA NE+G 
Sbjct: 660 TDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGS 711

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             PS PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR++
Sbjct: 712 SHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR 771

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                  ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 772 -------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 816


>gi|345797904|ref|XP_856244.2| PREDICTED: neurofascin isoform 8 [Canis lupus familiaris]
          Length = 1236

 Score =  259 bits (662), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 227/834 (27%), Positives = 354/834 (42%), Gaps = 84/834 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RKSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTASSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGTDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 658

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         ++ G   ++I   L P+  Y+F+VIA NE+
Sbjct: 659 TDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAILQ-LSPYVNYQFRVIAINEV 708

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 709 GSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 768

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++       ET + + N  +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 769 RR-------ETRETWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 815


>gi|350399162|ref|XP_003485438.1| PREDICTED: neuroglian-like isoform 1 [Bombus impatiens]
          Length = 1251

 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 232/811 (28%), Positives = 359/811 (44%), Gaps = 57/811 (7%)

Query: 180 IENPDKIPRGPYFIKQPTD-VVFDLSKRSI-LND--ITLSCYAGGYPNPSYEWFKEDYVQ 235
           I++P +I + P     PTD  +F +++  I  ND    + C A G P P Y W K     
Sbjct: 19  IQSPPRISKQP-----PTDEQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNG--- 70

Query: 236 DRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                N   P  D R +     G L+I+ PR  ED G Y C A N++G   S SV +   
Sbjct: 71  ----KNFEWPAYDDRISQQPGRGTLVISRPRD-EDLGQYQCFAENEWGIATSNSVFVRKA 125

Query: 294 FIGEFNLKRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYD 350
            +  F  +    +  N+     + C PP  +P  N YW        ++   + R+ +  +
Sbjct: 126 ELNSFKDQNPISLDANEGQPFKLTCQPPDGWPKPNVYWLIQDTAGGIKSINNSRMTLDPE 185

Query: 351 GALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFP 404
           G L+FS + + DA +   Y+C   S   +  + G    L V     +  Q K+     + 
Sbjct: 186 GNLWFSNVTRNDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKYEPVKQYV 245

Query: 405 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVED 462
               E    G K+ L C+  G P+P   W++ G  +  N      N+ + L I +V  +D
Sbjct: 246 SRKNEVALRGKKIELYCIHGGTPLPQIVWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKD 305

Query: 463 QGEYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
           +G Y C ASN     +S S+ + + A P FTI     +      + + C A GVP     
Sbjct: 306 EGTYTCEASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETVEFKCAANGVPVPEIK 365

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
           W  NG+ + SE  P     R  +  N + I  L  ++D   Y C A N L   Y    + 
Sbjct: 366 WIHNGKPI-SEAPP---NPRRKVTPNSIIIEKLT-KKDTGNYGCNATNSLGYVYKDVYVN 420

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641
           VL L+P   + P +  T   +G  V I C    APKP   W ++G  + +GGR K  ++G
Sbjct: 421 VLALEPEITQPPADIATV--DGKIVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSG 477

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L I  V   D+G Y+C A+N  G  E+ G L V       ++ P    +AA      RC
Sbjct: 478 DLEIENVIFLDAGTYTCHASNKFGEIEASGNLAVKEHTRITDE-PEDYEVAAGSTATFRC 536

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
           +A T+  L +   W  NG  I   D  E+E   I      L IT  +  D G Y CV  +
Sbjct: 537 NAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMITKTTELDTGTYTCVAHT 592

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 821
            + +   + T++V+  P  P  V V     T+ATI WT    N  PI  Y I   T++  
Sbjct: 593 ELDEAKAQATLVVQDVPNPPKLVSV-NCAGTTATIHWTPMGDNRAPILRYTIQHNTSFTP 651

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
             + +S+  +           E + +  + PW+ Y F+V+A N++G   PS  S    T 
Sbjct: 652 DTWEISKDPVPS--------TEQTYDVPMSPWANYTFRVLAWNKIGPSLPSPHSDVCTTL 703

Query: 882 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKE 940
            D P+  P  + G G    +L ISW  +P+ + NAP   Y++++R+    E +  E + +
Sbjct: 704 QDVPFTNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDIHD 763

Query: 941 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +    + V   P+   Y  Y++KV AIN+ G
Sbjct: 764 WKKNSLVVDNQPT---YQRYKIKVVAINERG 791


>gi|194769812|ref|XP_001966995.1| GF21814 [Drosophila ananassae]
 gi|190622790|gb|EDV38314.1| GF21814 [Drosophila ananassae]
          Length = 1407

 Score =  259 bits (661), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 218/802 (27%), Positives = 351/802 (43%), Gaps = 53/802 (6%)

Query: 190 PYFIKQPT--DVVFDLSK--RSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  IKQP   D++F +++  +   N   + C A G P P Y W K      +      D 
Sbjct: 29  PRIIKQPAPGDLLFKVAQPNKESDNPFIIECEADGQPEPEYSWIKNG---KKFNWQAYD- 84

Query: 246 LSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
             ++     G G+L+I  PR  EDRG Y C ASN+FG+  S SV +    +  F  + + 
Sbjct: 85  --NRMLQQPGRGSLVITSPRD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDENSK 141

Query: 305 EIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEE---DKRVFVSYDGALYFSALEQ 360
            +        M  C  P  +P     W      +   +   + R+ +  +G L+FS + +
Sbjct: 142 TLEAVEGEPYMLKCAAPDGFPSPTVNWMIQEVSDASIKSINNSRMTLDPEGNLWFSNVTR 201

Query: 361 IDAGN---YSCNVQSKVSDTGR--NGPFFPLKVFPHSNFQQLKFP-NNFPKTFPEAPKAG 414
            DA     Y+C+  S      +  N     +K    S  Q    P   +          G
Sbjct: 202 EDASADFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNRHPPVRQYVSRRQSLALRG 261

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASN 472
            ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  SN
Sbjct: 262 KRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSN 321

Query: 473 DRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
                +S S+ + + + P FT     K      ++T+ C A GVP+   SW  NG+ +  
Sbjct: 322 GVGNAQSFSIILEVNSVPYFTKEPEIKVAAEDEEVTFECRAAGVPEPKISWIHNGKPIEQ 381

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
            T       R  + DN +TI  L  + D   Y C A N L   Y    L V  L P  ++
Sbjct: 382 ST----PNPRRTVTDNTITIINL-VKGDTGNYGCNATNSLGYVYRDVYLNVQALPPEIRE 436

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 651
           +P +  +   +G NVT+ C  E APKP   W +  N + +GGR  +  NG+L I  V+  
Sbjct: 437 KPTDKSSV--DGRNVTMTCRVEGAPKPLVKWLRGSNWL-TGGRYNVQANGDLEIQDVTFS 493

Query: 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
           D+G Y+C A N  G   + G L+V    +   Q P    +AA ++   RC+   ++ LD+
Sbjct: 494 DAGKYTCYAENKFGNKSADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLDI 552

Query: 712 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
              W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + K  
Sbjct: 553 QIDWRKDGQPI---DF-ETQPRFVQTNDNSLTIAKTMELDSGEYTCVARTRLDEATAKAN 608

Query: 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHV 830
           +IV+  P  P  + +       A I W     N  PI HY I   T++  ++W    E V
Sbjct: 609 LIVQDVPNAPKLLGIT-CQADKAEISWEPQGDNRSPILHYTIQFNTSFTPASWDAAYEKV 667

Query: 831 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
              +          S    + PW+ Y F+VIA N++G   PS+ S    T  D PY+ P 
Sbjct: 668 PNTDF---------SFVVQMSPWANYTFRVIAFNKIGPSPPSAHSESCTTQPDVPYKNPD 718

Query: 891 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVV 949
            + G G +  +L ISW P+P  + NAP   Y++ W++      ++++ + ++    I + 
Sbjct: 719 NVVGQGREPNNLVISWTPMPEIEHNAPGFQYRVNWKRDIPAAPWENQNIYDWRQNNIVIT 778

Query: 950 RIPSEFYYTEYEVKVQAINDVG 971
             P+   + +Y +KV AIN+ G
Sbjct: 779 DQPT---FVKYLIKVVAINEKG 797


>gi|395838780|ref|XP_003792284.1| PREDICTED: neurofascin isoform 1 [Otolemur garnettii]
          Length = 1347

 Score =  259 bits (661), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 227/834 (27%), Positives = 356/834 (42%), Gaps = 84/834 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS++W +      R 
Sbjct: 26  EIPMDPSIQSELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFQWTR----NSRY 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS + Q D   +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMQQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MMS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IG+    E ++         L I   +  D G Y CV  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGSRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAYLTVLADQVTPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 658

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         ++ G   +++   L P+  Y+F+VIA NE+
Sbjct: 659 TDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLR-LSPYVNYQFRVIAINEV 708

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 709 GSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 768

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++       ET + + N  +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 769 RR-------ETREAWSNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 815


>gi|440891914|gb|ELR45352.1| Neurofascin, partial [Bos grunniens mutus]
          Length = 1272

 Score =  259 bits (661), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 225/833 (27%), Positives = 357/833 (42%), Gaps = 83/833 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +        
Sbjct: 25  EIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN------- 77

Query: 239 VANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
            +   +   D R ++    G L+I+     R  E  G Y C A NKFG+ +S  ++L   
Sbjct: 78  -SKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVS 136

Query: 294 ---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 + NL   P +  +     + C+PP   P    +W        + +DKRV   ++
Sbjct: 137 KSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHN 193

Query: 351 GALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           G LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    
Sbjct: 194 GDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTAS 253

Query: 410 APKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEY 466
           +     G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY
Sbjct: 254 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEY 313

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
            C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NG
Sbjct: 314 FCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNG 373

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E L S      + +R    D ++        R  A+YQC   N+     ++A + VL + 
Sbjct: 374 EPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVP 428

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNL 643
           P     P              + C    +P P   W K+G   GS   GG   ++ENG+L
Sbjct: 429 PRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSL 485

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C  
Sbjct: 486 EIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRV 544

Query: 704 HTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
             +  L +A  W  +   + I N    E ++         L I   +  D G Y CV  +
Sbjct: 545 KHDPSLKLAVSWLKDDEPLYISNRMKKEEDS---------LTIFGVAERDQGSYTCVAST 595

Query: 762 TVGKISTKTTVIV--------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 807
            + +   K  + V              +G P  P  +++ ++ + S  + W  G  N  P
Sbjct: 596 ELDQDLAKAYLTVLDQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSP 655

Query: 808 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
           IT Y +     +    F      +  +  ++ G   +++   L P+  Y+F+VIA NE+G
Sbjct: 656 ITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLR-LSPYVNYQFRVIAINEVG 707

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
              PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR+
Sbjct: 708 SSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRR 767

Query: 928 KNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +       ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 768 R-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 813


>gi|301765662|ref|XP_002918248.1| PREDICTED: neurofascin-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1189

 Score =  259 bits (661), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 223/843 (26%), Positives = 361/843 (42%), Gaps = 98/843 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +         +   +  
Sbjct: 28  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN--------SKFFNIA 79

Query: 247 SDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEF 298
            D R ++    G L+I+     R  +  G Y C A NKFG+ +S  ++L         + 
Sbjct: 80  KDPRVSMRRRSGTLVIDFRSGGRPEDYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKE 139

Query: 299 NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-A 357
           NL   P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  
Sbjct: 140 NLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNV 196

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK--------- 405
           + Q    +YSCN +   + T +    F LKV    P+++      P+ +           
Sbjct: 197 MLQDTQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPS 256

Query: 406 -TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPN 457
             +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I N
Sbjct: 257 FMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITN 316

Query: 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
           V  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P 
Sbjct: 317 VSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPK 376

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            T  W  NGE L S      + +R    D ++        R  A+YQC   N+     ++
Sbjct: 377 PTVQWMVNGEPLQSAP---RNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLAN 431

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGR 634
           A + VL + P     P              + C    +P P   W K+G   GS   GG 
Sbjct: 432 AFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGN 488

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
             ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P        
Sbjct: 489 YHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIFRMPEDQVAKRG 547

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADA 752
             +QL C    +  L +   W  +   + IGN    E ++         L I   +  D 
Sbjct: 548 TTVQLECRVKHDPSLKLTVTWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQ 598

Query: 753 GEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQ 797
           G Y C+  + + +   K  + V               +G P  P  +++ ++ + S  + 
Sbjct: 599 GSYTCIASTELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLT 658

Query: 798 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
           W  G  N  PIT Y +     +    F      +  +  ++ G   +++   L P+  Y+
Sbjct: 659 WIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQ 710

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F+VIA NE+G   PS PS +Y T    P   P+ + G G +  ++ I+W P+       P
Sbjct: 711 FRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGP 770

Query: 918 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPE 975
           N+ Y + WR++       ET + + NV +   R  + S   Y  YE++VQA ND G GPE
Sbjct: 771 NLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGSTPVYVPYEIRVQAENDFGKGPE 823

Query: 976 SEV 978
            + 
Sbjct: 824 PDT 826


>gi|395838782|ref|XP_003792285.1| PREDICTED: neurofascin isoform 2 [Otolemur garnettii]
          Length = 1261

 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 227/834 (27%), Positives = 356/834 (42%), Gaps = 84/834 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS++W +      R 
Sbjct: 47  EIPMDPSIQSELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFQWTR----NSRY 102

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 103 FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 160

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 161 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 217

Query: 353 LYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS + Q D   +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 218 LYFSNVMQQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQ 277

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 278 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 337

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 338 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 397

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 398 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 452

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 453 MMS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 509

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 510 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 568

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IG+    E ++         L I   +  D G Y CV  + +
Sbjct: 569 DPSLKLTVSWLKDDEPLYIGSRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 619

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 620 DQDLAKAYLTVLADQVTPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 679

Query: 809 THYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           T Y +    +      W + S         ++ G   +++   L P+  Y+F+VIA NE+
Sbjct: 680 TDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLR-LSPYVNYQFRVIAINEV 729

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 730 GSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 789

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++       ET + + N  +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 790 RR-------ETREAWSNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 836


>gi|297483858|ref|XP_002693951.1| PREDICTED: neurofascin isoform 1 [Bos taurus]
 gi|296479433|tpg|DAA21548.1| TPA: neurofascin homolog (chicken) isoform 1 [Bos taurus]
          Length = 1236

 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 226/836 (27%), Positives = 357/836 (42%), Gaps = 88/836 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +        
Sbjct: 25  EIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN------- 77

Query: 239 VANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
            +   +   D R ++    G L+I+     R  E  G Y C A NKFG+ +S  ++L   
Sbjct: 78  -SKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVS 136

Query: 294 ---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 + NL   P +  +     + C+PP   P    +W        + +DKRV   ++
Sbjct: 137 KSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHN 193

Query: 351 GALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           G LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    
Sbjct: 194 GDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTAS 253

Query: 410 APKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEY 466
           +     G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY
Sbjct: 254 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEY 313

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
            C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NG
Sbjct: 314 FCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNG 373

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           E L S      + +R    D ++        R  A+YQC   N+     ++A + VL + 
Sbjct: 374 EPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVP 428

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNL 643
           P     P              + C    +P P   W K+G   GS   GG   ++ENG+L
Sbjct: 429 PRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSL 485

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C  
Sbjct: 486 EIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRV 544

Query: 704 HTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
             +  L +A  W  +   + I N    E ++         L I   +  D G Y CV  +
Sbjct: 545 KHDPSLKLAVSWLKDDEPLYISNRMKKEEDS---------LTIFGVAERDQGSYTCVAST 595

Query: 762 TVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
            + +   K  + V               +G P  P  +++ ++ + S  + W  G  N  
Sbjct: 596 ELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNS 655

Query: 807 PITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           PIT Y +    +      W + S         ++ G   +++   L P+  Y+F+VIA N
Sbjct: 656 PITDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLR-LSPYVNYQFRVIAIN 705

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
           E+G   PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + 
Sbjct: 706 EVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVK 765

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           WR++       ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 766 WRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 814


>gi|291402555|ref|XP_002717616.1| PREDICTED: neurofascin isoform 1 [Oryctolagus cuniculus]
          Length = 1174

 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 225/828 (27%), Positives = 351/828 (42%), Gaps = 83/828 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVIL 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLVLAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579
             W  NGE L S      + +R    D ++        R  A+YQC   N+     ++A 
Sbjct: 379 VQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAF 433

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRK 636
           + VL + P     P              + C    +P P   W K+G   GS   GG   
Sbjct: 434 VSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYH 490

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           + ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          
Sbjct: 491 VHENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTT 549

Query: 697 LQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
           +QL C    +  L +   W  +   + I N    E ++         L I   +  D G 
Sbjct: 550 VQLECRVKHDPSLKLTVSWLKDEEPLYISNRMKKEDDS---------LTIFGVAEKDQGS 600

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y + 
Sbjct: 601 YTCVASTELDQDLAKAYLTVMGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQ 660

Query: 815 ARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
              +      W + S         ++ G   +++   L P+  Y+F+VIA NE+G   PS
Sbjct: 661 FEEDQFQPGVWHDHS---------KFPGNVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPS 710

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
            PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++    
Sbjct: 711 LPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR---- 766

Query: 933 FQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
              ET   + N  +   R  +     Y  YE++VQA ND G  PE E 
Sbjct: 767 ---ETRDAWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKAPEPET 811


>gi|403294840|ref|XP_003938371.1| PREDICTED: neurofascin [Saimiri boliviensis boliviensis]
          Length = 1316

 Score =  258 bits (660), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 227/831 (27%), Positives = 353/831 (42%), Gaps = 80/831 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 103 EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 158

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 159 FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 216

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 217 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPIAQDKRVSQGHNGD 273

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 274 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 333

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 334 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 393

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 394 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 453

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 454 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 508

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 509 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 565

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          + L C    
Sbjct: 566 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVHLECRVKH 624

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 625 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 675

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 676 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 735

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G 
Sbjct: 736 TDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGS 787

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++
Sbjct: 788 SHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR 847

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                  ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 848 -------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 891


>gi|358415963|ref|XP_590378.6| PREDICTED: neurofascin [Bos taurus]
          Length = 1215

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 223/825 (27%), Positives = 353/825 (42%), Gaps = 85/825 (10%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP  +     K  I++   +I + C A G P PS+ W +         +   +   D 
Sbjct: 15  LSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN--------SKFFNIAKDP 66

Query: 250 RFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNLK 301
           R ++    G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL 
Sbjct: 67  RVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLD 126

Query: 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQ 360
             P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + Q
Sbjct: 127 --PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVMLQ 183

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVR 418
               +YSCN +   + T +    F LKV       +      +P+    +     G  + 
Sbjct: 184 DMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLL 243

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   ++
Sbjct: 244 LECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI 303

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
             ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S      
Sbjct: 304 RHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP---P 360

Query: 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE 597
           + +R    D ++        R  A+YQC   N+     ++A + VL + P     P    
Sbjct: 361 NPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQL 417

Query: 598 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSG 654
                     + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D G
Sbjct: 418 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQG 475

Query: 655 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
           IY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +A  
Sbjct: 476 IYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVS 534

Query: 715 WTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
           W  +   + I N    E ++         L I   +  D G Y CV  + + +   K  +
Sbjct: 535 WLKDDEPLYISNRMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYL 585

Query: 773 IV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 817
            V               +G P  P  +++ ++ + S  + W  G  N  PIT Y +    
Sbjct: 586 TVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEE 645

Query: 818 NW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
           +      W + S         ++ G   +++   L P+  Y+F+VIA NE+G   PS PS
Sbjct: 646 DQFQPGVWHDHS---------KFPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPS 695

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935
            +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++       
Sbjct: 696 ERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR------- 748

Query: 936 ETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ET + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 749 ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 793


>gi|410900131|ref|XP_003963550.1| PREDICTED: neurofascin-like [Takifugu rubripes]
          Length = 1147

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 231/829 (27%), Positives = 356/829 (42%), Gaps = 104/829 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  ++QP  ++    K  I++    + + C A G P+P + W +      R      DP 
Sbjct: 23  PLEVRQPPTIIKQSMKEHIVDAKDTMVIECEAKGNPHPIFSWRR----NGRYYNVARDPQ 78

Query: 247 SDKRFTLSGGNLII---NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           +  R     G L I   N+P Q E    Y C ASN +GS  S  ++L         L RA
Sbjct: 79  ASMR--RHSGTLDIYAWNNPEQYE--AEYQCVASNMYGSAYSNKIRL--------RLYRA 126

Query: 304 PE---------IGNQNWGKAMFCDPPTNYPGVNYYWARD-YFPNFVEEDKRVFVSYDGAL 353
           P          + +      + CDPP   P    YW     +P  V +D+RV +  +G L
Sbjct: 127 PVWPREIIEPVVISAGLPLVLSCDPPPGPPKPETYWMSSCKWP--VRQDRRVSMGVNGDL 184

Query: 354 YFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP--------NNFP 404
           YFS  L    A +Y CN +                  P+ N  Q K P         +  
Sbjct: 185 YFSNVLFNDSAADYCCNAR-----------------LPYRNVIQQKMPVVVKVLTTRSVV 227

Query: 405 KTFPE--APKA---------GDKVRLECVAFGYPVPSYNWTRRGSPLPRNA--YFENFNR 451
           ++ P   +PK          G+++ +EC+A G P P   W + G  L   +    +NFN+
Sbjct: 228 ESTPSWLSPKGSSSTILVLLGEELLIECIAAGVPTPRITWRKDGEDLVVRSPMKVKNFNK 287

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE 511
           ++ IP    ED GEY+C A N    +E ++T+ ++A P +     D  +  + D    C 
Sbjct: 288 MIQIPKASFEDAGEYVCTAENKLGYIEHTITVQVKAAPFWLERPGDLVLAPEEDGRMVCR 347

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQL 571
           + G P  T +WF NGE  +S TL    Q    +    L +R +    + A+YQC A NQ 
Sbjct: 348 SDGAPRPTITWFINGEPTDSSTL----QPNVEVSGETLVLRSVTTLNN-AVYQCNASNQY 402

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS 631
               ++A + VL   P       E      EG    + C    +P P+  W K G     
Sbjct: 403 GYLLANAFVNVLHATPRILGSRNEYLKII-EGSRAFLDCRFFGSPVPELRWSKYGQGNLE 461

Query: 632 GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 691
           G R K   NG L I  +   D G Y C  +NV G DE++   I +  P+     P  I +
Sbjct: 462 GNRFKTHSNGTLEIKSIEVVDQGTYLCVVSNVAGRDENQVH-IEVKEPTVIVTRPTDIKV 520

Query: 692 AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 751
               +++  C+  T+    V   W   G +   +         I++D   L I N + AD
Sbjct: 521 IRGTDVRFECAVKTDATTPVTTTWL-KGTKPVTLGWR------ISMDESNLVIGNTNPAD 573

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
           +G Y C+V++ +   S    ++V   P  P  +++ E H+ S  + W  G +N  PIT Y
Sbjct: 574 SGNYTCLVQTELEHKSASAHLMVMDRPDPPTDLELSEPHERSVRLSWVPGNSNHNPITDY 633

Query: 812 KI-IARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            +     +W    W N+S          Y G    S+   L+P++ YEF+VIA NE+G  
Sbjct: 634 LVQYDDDDWLPGKWKNLS---------LYPGDLN-SVTLHLLPFTYYEFRVIAINEIGMS 683

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
            PS  S ++ +    P   P  + G G    ++ ISWEPL   + N P++ Y ++WR+++
Sbjct: 684 RPSRRSTRFQSSGAPPDVIPKNLKGVGTWRNNMEISWEPLAYREWNGPHLKYLVWWRRRD 743

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             E       ++    I          +T YE+K+QA+ND G GPES V
Sbjct: 744 SREEWKNATTKWSKYYIYDADT-----FTPYELKIQAVNDFGLGPESPV 787


>gi|351711148|gb|EHB14067.1| Neurofascin [Heterocephalus glaber]
          Length = 1343

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 227/832 (27%), Positives = 357/832 (42%), Gaps = 86/832 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 27  EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 82

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 83  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 140

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 141 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 197

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 198 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQ 257

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 258 MVLRGMDLLLECIASGVPTPGIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 317

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 318 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 377

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP- 587
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 378 LQSAP---PNPNREVAGDTIIFRDTQVSSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 432

Query: 588 --SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGN 642
             S + + +    Y        + C    +P P   W K+G   GS   GG   ++ENG+
Sbjct: 433 MLSARNQLIRVILY----NRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGS 486

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C 
Sbjct: 487 LEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIFRMPEDQVAKRGTTVQLECR 545

Query: 703 AHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
              +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  
Sbjct: 546 VKHDPSLRLTVTWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVAS 596

Query: 761 STVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNG 805
           + + +   K  + V               +G P  P  +++ ++ + S  + W  G  N 
Sbjct: 597 TELDQDLAKAHLTVLDDQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGEDNN 656

Query: 806 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
            PIT Y +     +    F      +  +  ++ G   +++   L P+  Y+F+VIA NE
Sbjct: 657 SPITEYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINE 708

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
           +G   PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + W
Sbjct: 709 VGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKW 768

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPE 975
           R++       E  + + NV +   R  +     Y  YE++VQA ND G GPE
Sbjct: 769 RRR-------EARETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPE 813


>gi|410925447|ref|XP_003976192.1| PREDICTED: neurofascin-like [Takifugu rubripes]
          Length = 1510

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 234/832 (28%), Positives = 357/832 (42%), Gaps = 95/832 (11%)

Query: 185 KIPRGPYFI---KQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           ++P+ P  +   KQP  +V   +K  I++   +I + C A G   P++ W        R 
Sbjct: 185 EVPQDPKILQDLKQPPTIVKQSAKDYIVDPRDNIIIECEAKGNTLPTFSW--------RR 236

Query: 239 VANLIDPLSDKRFTLS--GGNLIINDPR--QVED-RGSYHCKASNKFGSIISESVQLAFG 293
                +   D R T+    G L I+  R  + ED  G Y C A+N+ G  +S  + L   
Sbjct: 237 NGKFFNVGKDPRVTMRKRSGTLEISFRRGGRPEDYEGEYQCFANNELGVALSNKILL--- 293

Query: 294 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG---------------VNYYWARDYFPNF 338
                 + +AP      W K +  DP     G                  +W  +     
Sbjct: 294 -----RVSKAPL-----WPKEVL-DPVLVNEGSPLILPCNPPPGLPPPLIFWMDNTMTPI 342

Query: 339 VEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL 397
           V+ DKRV +  +G LYFS +   DA N Y CN + +++ T +    F LKV       Q 
Sbjct: 343 VQ-DKRVSMGLNGDLYFSNVMTKDALNEYKCNARCRLTQTIQQKNPFILKVQTSRKLPQ- 400

Query: 398 KFPNNFPKTFPEAPKA---GDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFENFNRIL 453
             P        ++ K    G ++ LEC+A G P PS  W R+G  LP R   FENFN+ L
Sbjct: 401 SMPTLLSPVGSQSSKMVLRGQELLLECIAAGLPTPSIKWYRKGGDLPERKVKFENFNKTL 460

Query: 454 TIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF 513
            +  V  ED GEY+C A+N   ++  S+ + ++A P +    T+  +         C A 
Sbjct: 461 VVMGVSEEDAGEYVCMANNHLGSVRHSILVQVKAAPYWLDKPTNLVLAPDEHGRLVCRAN 520

Query: 514 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573
           G P     W  NG+ +  ET P  +  R  + D ++  R +      A+YQC A NQ   
Sbjct: 521 GNPKPNIQWLINGQPI--ETSP-PNPGRQVLGDTII-FRSVQ-MGSSAVYQCNASNQYGY 575

Query: 574 RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SG 632
             ++A + VL + P     P        E  +  + C    +P P   W K+G   G  G
Sbjct: 576 LLANAFISVLDMPPRMLG-PKNQLIKVIENTHTFLDCPFFGSPLPDLRWFKNGQGSGVDG 634

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
           G   +  NG L I     +D G Y+C A N+ G  E++ RL V         +P   +  
Sbjct: 635 GHYTVHNNGTLEIKRARAEDEGTYTCVANNLLGKAENQVRLEVKEATRII-GVPQHQSAV 693

Query: 693 AHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFA 750
                + +C   ++  L V   WT +   + +G           +  D  LL I+  +  
Sbjct: 694 RGSTARFKCQVKSDPSLPVTVTWTKDDKPLNVGW---------RLRKDEDLLSISAVNEG 744

Query: 751 DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 810
           D G Y C VKS +   S    + V G P  P  + + +    S  + W  G  +  P+TH
Sbjct: 745 DEGMYTCTVKSEIDADSASARLTVLGCPDPPVELDLSDPAARSVRLTWIPGNEHRSPVTH 804

Query: 811 YKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           + +      W    W N+S          Y G   + I   L P+  Y+F+VIA N +G 
Sbjct: 805 FLVQFEEDRWEPGQWRNMSS---------YPGHLNSVILQ-LAPFVNYQFRVIAINSVGQ 854

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
            EPS+PSPQY T    P   P  + G G    ++ I+WEPL   ++N  N+ Y ++WR+K
Sbjct: 855 SEPSTPSPQYKTSGAAPDVIPRGLRGWGSMKDNMEITWEPLLDLERNGANLIYSLWWRRK 914

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + +E       ++ NV  A  +  + S   Y  YE+K+QA N+ G GP S V
Sbjct: 915 DMSE-------DWNNVTTAGNKHMVHSTETYVPYEIKIQAGNEFGSGPVSNV 959


>gi|380810882|gb|AFE77316.1| neurofascin isoform 2 precursor [Macaca mulatta]
          Length = 1189

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 230/845 (27%), Positives = 358/845 (42%), Gaps = 104/845 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKT--TVIVE-------------GPPGLPGGVQVVEVHKTSATI 796
            G Y CV  + + +   K   TV+ +             G P  P  +++ ++ + S  +
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPIGRPDRPRDLELTDLAERSVRL 657

Query: 797 QWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
            W  G  N  PIT Y +    +      W + S         +Y G   +++   L P+ 
Sbjct: 658 TWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYV 707

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            Y+F+VIA NE+G   PS PS +Y T    P   P  + G G +  ++ I+W P+     
Sbjct: 708 NYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSA 767

Query: 915 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGP 972
             PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G 
Sbjct: 768 FGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGK 820

Query: 973 GPESE 977
           GPE E
Sbjct: 821 GPEPE 825



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 168/695 (24%), Positives = 266/695 (38%), Gaps = 120/695 (17%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 301 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 353

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 354 --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 409

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 410 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLD--CPFFG 467

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 468 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 520

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 521 -AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 578

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL      +Q  P   +A
Sbjct: 579 NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLA-----DQATPTNRLA 632

Query: 693 AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA-- 750
           A   +         EL D+A       VR+  +  ++  +P   I   +++     F   
Sbjct: 633 AL-PIGRPDRPRDLELTDLA----ERSVRLTWIPGDDNNSP---ITDYVVQFEEDQFQPG 684

Query: 751 ---DAGEYECVVKSTVGKIST------KTTVIVE-----------------GPP-GLPGG 783
              D  +Y   V S V ++S       +   + E                  PP   PG 
Sbjct: 685 VWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGD 744

Query: 784 VQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVD 836
           V+     K +  I WT  +  +   P   Y +       R  WN+     S +V+G+   
Sbjct: 745 VKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP- 803

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
                       V VP   YE +V A N+ G G P   S    +  D P  AP+ +    
Sbjct: 804 ------------VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRV 847

Query: 897 GKIGDLSISWEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGN 943
                +S+ W  + P   Q     Y   +WR            K+    F  + L+    
Sbjct: 848 MNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR---- 903

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            G+ V R+   F Y+ Y++++  +N  G GP SE 
Sbjct: 904 -GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 933


>gi|426339216|ref|XP_004033554.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Gorilla gorilla gorilla]
          Length = 1171

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 226/864 (26%), Positives = 372/864 (43%), Gaps = 86/864 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      +  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLLLGRGLIVSLIFFLL------KFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIITS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPVVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKSHMLELHCESKCDSHLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--E 834
            P  P  + + E    S  + W  GA +   I+ Y +          F  ++   G+  E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGADHNSDISEYIV---------EFEGNKEEPGRWDE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGPESE 977
              Y  Y+VKVQAIN +G GP+ +
Sbjct: 791 PAVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 231/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE + RY I +N         E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   +++  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKSHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   D++ YI    G +      +EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSDISEYIVEFEGNKEEPGRWDELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|397522461|ref|XP_003831285.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Pan paniscus]
          Length = 1225

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 227/863 (26%), Positives = 370/863 (42%), Gaps = 84/863 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      +  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLLLGRGLIVSLIFFLL------KFSKAIEIPSSVQQAPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED---YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265
                + C A G P P++ W K+    Y  D  +    +         SG   I N+   
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIMTSNN---------SGTFRIPNEGHI 100

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
              +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   P
Sbjct: 101 SHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLP 160

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGP 382
            ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  P
Sbjct: 161 PLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMP 219

Query: 383 F-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLECV 422
               +    H+N               +Q K     P T   +  +     G+ + LEC 
Sbjct: 220 MKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECF 279

Query: 423 AFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN         
Sbjct: 280 AEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDF 339

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            + ++  P +T           ++    CEA G P  T  W  NG  +++        D 
Sbjct: 340 HVIVEEPPRWTKQPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDV 396

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
            F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA 
Sbjct: 397 VFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYAT 451

Query: 602 EGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCT 659
             G +  + C   A+P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC 
Sbjct: 452 VVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCW 511

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTH 717
             N  G       L + +  +     P    I     L+L C +  +  L   +   W+ 
Sbjct: 512 VENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSK 570

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V   
Sbjct: 571 DGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDV 627

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEV 835
           P  P  + + E    S  + W  GA +   I+ Y +    N      W         +E+
Sbjct: 628 PDPPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EEL 678

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
            R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS ++ TP   P + P  I   
Sbjct: 679 TRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQ 737

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 954
             +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ + 
Sbjct: 738 ASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTP 791

Query: 955 FYYTEYEVKVQAINDVGPGPESE 977
             Y  Y+VKVQAIN +G GP+ +
Sbjct: 792 AVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 142/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE + RY I +N         E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y++ W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQVNWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|359073801|ref|XP_003587093.1| PREDICTED: neurofascin [Bos taurus]
 gi|296479435|tpg|DAA21550.1| TPA: neurofascin homolog (chicken) isoform 3 [Bos taurus]
          Length = 1188

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 231/863 (26%), Positives = 365/863 (42%), Gaps = 111/863 (12%)

Query: 173 TYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE 231
           T   G  IE P  + + P   KQ   D + D       ++I + C A G P PS+ W + 
Sbjct: 17  TLSLGGAIEIPMDLSQPPTITKQSVKDHIVDPR-----DNILIECEAKGNPAPSFHWTRN 71

Query: 232 DYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISE 286
                   +   +   D R ++    G L+I+     R  E  G Y C A NKFG+ +S 
Sbjct: 72  --------SKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSN 123

Query: 287 SVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343
            ++L         + NL   P +  +     + C+PP   P    +W        + +DK
Sbjct: 124 RIRLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDK 180

Query: 344 RVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKF 399
           RV   ++G LYFS  + Q    +YSCN +   + T +    F LKV    P+++      
Sbjct: 181 RVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNH 240

Query: 400 PNNFPK----------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
           P+ +             +P+   +      G  + LEC+A G P P   W ++G  LP +
Sbjct: 241 PDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD 300

Query: 444 -AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
            A FENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +  
Sbjct: 301 KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAP 360

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERD 559
             D    C A G P  T  W  NGE L S       +   D    +D  ++ R       
Sbjct: 361 GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR------- 413

Query: 560 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 619
            A+YQC   N+     ++A + VL + P     P              + C    +P P 
Sbjct: 414 -AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPT 471

Query: 620 FVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
             W K+G   GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V 
Sbjct: 472 LRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV- 528

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPN 734
             P+   ++P          +QL C    +  L +A  W  +   + I N    E ++  
Sbjct: 529 KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKEEDS-- 586

Query: 735 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPG 779
                  L I   +  D G Y CV  + + +   K  + V               +G P 
Sbjct: 587 -------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPD 639

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDR 837
            P  +++ ++ + S  + W  G  N  PIT Y +    +      W + S         +
Sbjct: 640 RPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHS---------K 690

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
           + G   +++   L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS + G G 
Sbjct: 691 FPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 749

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEF 955
           +  ++ I+W P+       PN+ Y + WR++       ET + + NV +   R  +    
Sbjct: 750 RKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTP 802

Query: 956 YYTEYEVKVQAINDVGPGPESEV 978
            Y  YE++VQA ND G GPE + 
Sbjct: 803 VYVPYEIRVQAENDFGKGPEPDT 825


>gi|345797906|ref|XP_545682.3| PREDICTED: neurofascin isoform 1 [Canis lupus familiaris]
          Length = 1189

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 226/844 (26%), Positives = 357/844 (42%), Gaps = 100/844 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RKSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTASSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATI 796
            G Y CV  + + +   K  + V               +G P  P  +++ ++ + S  +
Sbjct: 598 QGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRL 657

Query: 797 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
            W  G  N  PIT Y +     +    F      +  +  ++ G   ++I   L P+  Y
Sbjct: 658 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAILQ-LSPYVNY 709

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G   PS PS +Y T    P   P+ + G G +  ++ I+W P+       
Sbjct: 710 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFG 769

Query: 917 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 974
           PN+ Y + WR++       ET + + N  +   R  +     Y  YE++VQA ND G GP
Sbjct: 770 PNLRYIVKWRRR-------ETRETWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 822

Query: 975 ESEV 978
           E + 
Sbjct: 823 EPDT 826


>gi|397522463|ref|XP_003831286.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Pan paniscus]
          Length = 1171

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 227/863 (26%), Positives = 370/863 (42%), Gaps = 84/863 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      +  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLLLGRGLIVSLIFFLL------KFSKAIEIPSSVQQAPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED---YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265
                + C A G P P++ W K+    Y  D  +    +         SG   I N+   
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIMTSNN---------SGTFRIPNEGHI 100

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
              +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   P
Sbjct: 101 SHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLP 160

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGP 382
            ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  P
Sbjct: 161 PLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMP 219

Query: 383 F-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLECV 422
               +    H+N               +Q K     P T   +  +     G+ + LEC 
Sbjct: 220 MKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECF 279

Query: 423 AFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN         
Sbjct: 280 AEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDF 339

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            + ++  P +T           ++    CEA G P  T  W  NG  +++        D 
Sbjct: 340 HVIVEEPPRWTKQPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDV 396

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
            F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA 
Sbjct: 397 VFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYAT 451

Query: 602 EGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCT 659
             G +  + C   A+P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC 
Sbjct: 452 VVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCW 511

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTH 717
             N  G       L + +  +     P    I     L+L C +  +  L   +   W+ 
Sbjct: 512 VENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSK 570

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V   
Sbjct: 571 DGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDV 627

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEV 835
           P  P  + + E    S  + W  GA +   I+ Y +    N      W         +E+
Sbjct: 628 PDPPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EEL 678

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
            R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS ++ TP   P + P  I   
Sbjct: 679 TRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQ 737

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 954
             +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ + 
Sbjct: 738 ASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTP 791

Query: 955 FYYTEYEVKVQAINDVGPGPESE 977
             Y  Y+VKVQAIN +G GP+ +
Sbjct: 792 AVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 140/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y++ W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQVNWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|344277018|ref|XP_003410302.1| PREDICTED: neurofascin-like isoform 3 [Loxodonta africana]
          Length = 1239

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 223/832 (26%), Positives = 354/832 (42%), Gaps = 80/832 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGEPCPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNVAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I N+  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSHKAKFENFNKALRITNISEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++  L V   P+   Q+P    +     +QL C    
Sbjct: 489 KMIRKEDKGIYTCVATNILGKAENQVHLEV-KDPTRIYQMPEDQVVKRGTTVQLPCRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + +GN    E ++         L I   +  D G Y C+  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYVGNRMKKEDDS---------LTIFGVAERDQGSYTCIASTEL 598

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 599 DQDLAKAHLTVLADQATPTNRLALLPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 658

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  ++ G   +++   L P+  Y+F+VIA NE+G 
Sbjct: 659 TDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGS 710

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             PS PS +Y T    P   P+ + G G +  ++ I+W P+       PN+ Y + WR++
Sbjct: 711 SHPSLPSERYRTSGAAPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR 770

Query: 929 NDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                  ET   + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 771 -------ETRDTWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 815


>gi|441665500|ref|XP_004091814.1| PREDICTED: contactin-4 [Nomascus leucogenys]
          Length = 697

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 161/473 (34%), Positives = 239/473 (50%), Gaps = 17/473 (3%)

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           + ++ W C+A G P  TY W +NGE L +       +DR  I+   L I  +N   D  M
Sbjct: 2   EENVFWECKANGRPKPTYRWLKNGEHLQT-------RDRIQIEQGTLNITMVNLS-DAGM 53

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC A+N+    +S+A+L V+ + P F +  L+  T    GG V I C P+A+PKP + W
Sbjct: 54  YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 113

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           KK  +I+    R  I E+GNL I  V++ D+G Y+C ATN  G   S G L+V   P+  
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCVATNHFGTASSTGNLVV-KDPTRV 172

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 741
              P  + +    ++ L C    +  LD+ + W+ NG  I  + D +  E    +  G L
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDL 232

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
           + I N     AG+Y C+V+++V ++S    +IV GPPG P  V + E+  T+A + W  G
Sbjct: 233 M-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 291

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             N  PIT Y I ART ++  W  VS   + + +D   G+   +    L PW  YEF+ +
Sbjct: 292 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 346

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N +G GEPS PS +  T    P   P+ + GGGG   +L I+WE +P E QN     Y
Sbjct: 347 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 406

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            + +R      +    L    +    V R  S   ++ +EVKV   N+ G GP
Sbjct: 407 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGP 458



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 129/584 (22%), Positives = 211/584 (36%), Gaps = 44/584 (7%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           + V  EC A G P P+Y W + G  L      +     L I  V + D G Y C A N  
Sbjct: 3   ENVFWECKANGRPKPTYRWLKNGEHLQTRDRIQIEQGTLNITMVNLSDAGMYQCLAENKH 62

Query: 475 SALESSVTISIQA-EPNFTIPLTDK--HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + S+  +S+ A  P+F+  L  +   +    ++   C+    P   Y+W +  ++   
Sbjct: 63  GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDI--- 119

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
               L++ +R  I ++   +R +N  + D   Y C A N   T  S+  L V+       
Sbjct: 120 ----LKENERITISED-GNLRIINVTKSDAGSYTCVATNHFGTASSTGNL-VVKDPTRVM 173

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------GNLL 644
             P   +   GE   +      + +    F W  +G++I        FE       G+L+
Sbjct: 174 VPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDLM 233

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I  +    +G Y C          +   LIV   P   E +           L  R    
Sbjct: 234 IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPD 293

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKST 762
               + +  I       +G   ++ +  P + IDG     T        EYE   V  + 
Sbjct: 294 NHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTFTATVVGLNPWVEYEFRTVAANV 350

Query: 763 VG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKII 814
           +G     + S K       P   P  V      K+   I W    +   NGR    Y + 
Sbjct: 351 IGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF-GYVVA 409

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
            R      W      +   +  RY  R E+     + P+S +E KV   N  G G P SP
Sbjct: 410 FRPYGKMIWMLTV--LASADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG-PFSP 461

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           +    +  ++P + P+ I        D+ + W   P EK       Y++ + +  D E  
Sbjct: 462 TTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLEKNRGRIQGYEVKYWRHEDKEEN 520

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +  ++  GN      +I +      Y + V+A N  G GP S +
Sbjct: 521 ARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGTGPSSAI 562



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 47/310 (15%)

Query: 216 CYAGGYPNPSYEWFKE-DYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHC 274
           C A G P P+Y W K  +++Q R            R  +  G L I     + D G Y C
Sbjct: 9   CKANGRPKPTYRWLKNGEHLQTR-----------DRIQIEQGTLNIT-MVNLSDAGMYQC 56

Query: 275 KASNKFGSIISESVQLAFGFIGEFN---LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWA 331
            A NK G I S +         +F+   LKR   +  +  G+ +    P   P   Y W 
Sbjct: 57  LAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLV--KVGGEVVIECKPKASPKPVYTWK 114

Query: 332 RDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF---PLKV 388
           +    + ++E++R+ +S DG L    + + DAG+Y+C   +        G      P +V
Sbjct: 115 KGR--DILKENERITISEDGNLRIINVTKSDAGSYTCVATNHFGTASSTGNLVVKDPTRV 172

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYPVP-SYNWTRRGSPLPRNAYF 446
                   +  P++   T       G+ + L C V   + +   + W+  G  +  +   
Sbjct: 173 --------MVPPSSMDVTV------GESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDG 218

Query: 447 ENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT-DK 498
           ++F R+       L I N++++  G+Y+C        L ++  + ++  P     +T D+
Sbjct: 219 DHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDE 278

Query: 499 HMDNQADLTW 508
             D  A L+W
Sbjct: 279 ITDTTAQLSW 288


>gi|426339214|ref|XP_004033553.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Gorilla gorilla gorilla]
          Length = 1225

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 226/864 (26%), Positives = 372/864 (43%), Gaps = 86/864 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      +  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLLLGRGLIVSLIFFLL------KFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIITS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPVVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKSHMLELHCESKCDSHLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--E 834
            P  P  + + E    S  + W  GA +   I+ Y +          F  ++   G+  E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGADHNSDISEYIV---------EFEGNKEEPGRWDE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGPESE 977
              Y  Y+VKVQAIN +G GP+ +
Sbjct: 791 PAVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 142/593 (23%), Positives = 231/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   +++  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKSHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   D++ YI    G +      +EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSDISEYIVEFEGNKEEPGRWDELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|350591362|ref|XP_003132376.3| PREDICTED: neural cell adhesion molecule L1-like protein [Sus
           scrofa]
          Length = 1225

 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 224/858 (26%), Positives = 362/858 (42%), Gaps = 83/858 (9%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSILND 211
           +LF     I  L + L      ++ M ++ P  + + P  IKQ    V F   +      
Sbjct: 3   MLFSGRRVITSLIFFL-----LKFSMAVDIPLSVQQVPTIIKQSKVQVAFPFDEY----- 52

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQVED 268
             + C A G P P Y W K+D   +         LSD R  +S   G   I N+      
Sbjct: 53  FQIECEAKGNPEPKYSWTKDDKHFE---------LSDPRIIVSNNSGTFRIPNEGHISHF 103

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVN 327
           +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   P ++
Sbjct: 104 QGKYRCFASNKLGVAMSEEIEFIVPNVPKFPKEKIDPLEVEEGDSIVLPCNPPKGLPPLH 163

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-F 384
            YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  P   
Sbjct: 164 IYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKL 222

Query: 385 PLKVFPHSN---------FQQLKFPNNFPKTFPEAPKAGDK----------VRLECVAFG 425
            +    H+N          +        P+     P++G +          + LEC A G
Sbjct: 223 TVNSLKHANDSSSSTEIGSKANSIKQRKPRLLLPPPESGSRSSVIILKGETLLLECFAEG 282

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            P P  +W + G  LP+     EN+ + L I NV  +D+G Y C A+N   +      + 
Sbjct: 283 LPTPQVDWNKMGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTANNFLGSATHDFHVI 342

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++  P +T           +     CEA G P+ T  W  NG  +  E  P        I
Sbjct: 343 VEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSPI--ERNPFSGD---VI 397

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
               ++   + P    A+YQC A N   T  +SA + V+ ++P  +    + E YA   G
Sbjct: 398 SPGEISFTNVQPNHT-AVYQCEASNVHGTILASANIDVVDVRPLIQT--TDEENYATVVG 454

Query: 605 -NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATN 662
            +  + C   A+P+    W+K        GRR  I ENG L I+  + +D+G YSC   N
Sbjct: 455 YSAFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHIHENGTLQINTTTEEDAGSYSCWVEN 514

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGV 720
             G       L + +  +     P    +     L+L C    +  L   +   W+ +G 
Sbjct: 515 AKGKTAVTANLDIRNA-TKLRVSPKNPRVPKSHTLELHCENKCDSYLKHSLKLSWSKDGE 573

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
                ++N  E   I IDG  L I N +  D G Y C+  +++   +  T V V   P  
Sbjct: 574 A---FEINGTEDGRIIIDGANLTIANVTLEDQGIYSCLAHTSLDSTADMTQVTVLDVPDP 630

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRY 838
           P  +Q+ E H  S  + W  G  +   I+ Y +    N      W         +E+ R 
Sbjct: 631 PENLQLSERHNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EELARV 681

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
            G KE +    L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +
Sbjct: 682 PG-KETTATLSLAPYVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQ 740

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYY 957
             ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y
Sbjct: 741 PKEMIIKWEPLKPMEQNGPGLEYRVTWKPQGALVEWEEETVTNH------TLRVMTPAVY 794

Query: 958 TEYEVKVQAINDVGPGPE 975
             Y+V+VQAIN +G  P+
Sbjct: 795 APYDVQVQAINHLGSAPD 812



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 149/598 (24%), Positives = 235/598 (39%), Gaps = 81/598 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI--LTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+ RN +  +      ++  NV+      Y C ASN    
Sbjct: 366 LLCEAEGEPEPTIKWRVNGSPIERNPFSGDVISPGEISFTNVQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + +S  I +  +    I  TD+  +N A +        CE F  P+   SW +       
Sbjct: 426 ILASANIDV-VDVRPLIQTTDE--ENYATVVGYSAFLHCEFFASPEAIVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE + RY I +N         E D   Y C  +N       +A L +     L + 
Sbjct: 478 EAKPLEGR-RYHIHENGTLQINTTTEEDAGSYSCWVENAKGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   + P +S T      N    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 PKNPRVP-KSHTLELHCENK---CDSYLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            I+ V+ +D GIYSC A           ++ VL  P   E L  +++   +R+++L   A
Sbjct: 593 TIANVTLEDQGIYSCLAHTSLDSTADMTQVTVLDVPDPPENL--QLSERHNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG----EYECV 758
             +   +++ YI    G +       EL      + G   + T A+ + A     ++  +
Sbjct: 651 GDDHNSNISEYIVEFEGNKEEPGRWEEL----ARVPG---KETTATLSLAPYVRYQFRVI 703

Query: 759 VKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW---TDGATNGRPITH 810
             + VG+   ++ +   E PP  P      ++V         I+W        NG P   
Sbjct: 704 AMNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKPMEQNG-PGLE 762

Query: 811 YKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNEL 866
           Y++        TW      V  +E  V  +T R       V+ P  ++ Y+ +V A N L
Sbjct: 763 YRV--------TWKPQGALVEWEEETVTNHTLR-------VMTPAVYAPYDVQVQAINHL 807

Query: 867 GYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           G    S+P PQ     +  D P  AP   G        + ++W  +P+E+ +     Y++
Sbjct: 808 G----SAPDPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKERVHGHLKGYQV 863

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
            W K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 864 NWWKTKSLLDGRTHPKEVNVLRFSGQRNYGMVPSLDAFSEFHLTVLAFNSKGAGPESE 921


>gi|354478079|ref|XP_003501243.1| PREDICTED: neurofascin isoform 1 [Cricetulus griseus]
          Length = 1189

 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 227/846 (26%), Positives = 359/846 (42%), Gaps = 104/846 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVSERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP +   FENFN+ L I NV 
Sbjct: 259 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKTKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P    +  
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVVKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATI 796
            G Y C+  + + +   K  + V               +G P  P  +++ ++ + S  +
Sbjct: 598 QGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRL 657

Query: 797 QWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
            W  G  N  PIT Y I    +      W + S         ++ G   +++ + L P+ 
Sbjct: 658 TWIPGDDNNSPITDYVIQFEEDQFQPGVWHDHS---------KFPGSVNSAVLH-LSPYV 707

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            Y+F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+W P+     
Sbjct: 708 NYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSA 767

Query: 915 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGP 972
             PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G 
Sbjct: 768 FGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGK 820

Query: 973 GPESEV 978
           GPE + 
Sbjct: 821 GPEPDT 826


>gi|149058628|gb|EDM09785.1| neurofascin, isoform CRA_a [Rattus norvegicus]
          Length = 1205

 Score =  257 bits (656), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 231/858 (26%), Positives = 365/858 (42%), Gaps = 101/858 (11%)

Query: 173 TYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE 231
           ++  G  IE P  + + P   KQ   D + D       ++I + C A G P PS+ W + 
Sbjct: 34  SWSLGGAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNPAPSFHWTR- 87

Query: 232 DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESV 288
                R      DP    R     G L+I+     R  E  G Y C A NKFG+ +S  +
Sbjct: 88  ---NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRI 142

Query: 289 QLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV 345
           +L         + NL   P +  +     + C+PP   P    +W        + +DKRV
Sbjct: 143 RLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRV 199

Query: 346 FVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPN 401
              ++G LYFS  + Q    +YSCN +   + T +    F LKV    P+++      P+
Sbjct: 200 SQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPD 259

Query: 402 NFPK----------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-A 444
            +             +P+   +      G  + LEC+A G P P   W ++G  LP + A
Sbjct: 260 IYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA 319

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
            FENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    
Sbjct: 320 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGE 379

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           D    C A G P  T  W  NG+ L S      + +R    D ++        R  A+YQ
Sbjct: 380 DGRLVCRANGNPKPTVQWLVNGDPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQ 434

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C   N+     ++A + VL + P     P              + C    +P P   W K
Sbjct: 435 CNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFK 493

Query: 625 DGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           +G   GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+ 
Sbjct: 494 NGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTR 550

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDG 739
             ++P          +QL C    +  L +   W  +   + IGN    E ++       
Sbjct: 551 IYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS------- 603

Query: 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGV 784
             L I   +  D G Y C+  + + +   K  + V               +G P  P  +
Sbjct: 604 --LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDL 661

Query: 785 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRK 842
           ++ ++ + S  + W  G  N  PIT Y +    +      W + S         ++ G  
Sbjct: 662 ELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHS---------KFPGSV 712

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
            +++ + L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++
Sbjct: 713 NSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNM 771

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEY 960
            I+W P+       PN+ Y + WR++       ET + + NV +   R  +     Y  Y
Sbjct: 772 EITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPY 824

Query: 961 EVKVQAINDVGPGPESEV 978
           E++VQA ND G GPE E 
Sbjct: 825 EIRVQAENDFGKGPEPET 842


>gi|358339694|dbj|GAA42413.2| contactin [Clonorchis sinensis]
          Length = 958

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 206/685 (30%), Positives = 305/685 (44%), Gaps = 106/685 (15%)

Query: 334 YFPN-FVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGR-NGPFFPLKVFPH 391
           Y PN F+ + K       G + FS +  +D G Y C V  + +     + P  P   F  
Sbjct: 64  YRPNLFISQAK-------GLIGFSEVTALDTGIYVCIVTMQFNGVRLFDSPKLPDMPFTV 116

Query: 392 SNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV---PSYNWTRR-GSPLPRN 443
           +      Q+ +  ++FP  +P  P+ G  VRLEC A GY      +Y W RR G P+ R 
Sbjct: 117 TQSNEPRQEPRIYDDFPAIWPSNPQRGQFVRLECFASGYSQFEGLTYTWRRREGLPI-RP 175

Query: 444 AYFENFNRILTIPNVKVEDQGEYICRASND--RSALESSVTISIQAEPNFTIPLTDKHMD 501
               +F+R++ +PNV+ EDQGEY C   +   + A   SV + I A+P F  PL D   D
Sbjct: 176 GSLRDFDRVIELPNVQPEDQGEYECSVHDSLGKKATPRSVMLHITAKPYFPTPLHDTVAD 235

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNG----ELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 557
              D+T TCEA  +P+  ++W+RNG    +L++   L   D  RY +    L+       
Sbjct: 236 IGTDITLTCEAAAIPEPEHAWYRNGIAVSDLISQGKL---DPARYSLISVQLS------- 285

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 617
            D +M+ C A N L +  SS +LRV++L P+F + P+        GG+V + C PE AP 
Sbjct: 286 -DSSMFTCLAWNNLGSEASSGELRVISLAPTFARHPVMPNE-GMVGGSVVMECRPEGAPS 343

Query: 618 PKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
            K  W  +  ++         E G+  L +SP++R                         
Sbjct: 344 MKTEWLHNAAVLSPSTSIMDPETGSATLQLSPMNR------------------------- 378

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735
                          +  +  + L C A +   LD+ Y W   GV+I   D  +L+    
Sbjct: 379 --------------VVYENSTVLLPCRASSSPYLDINYAWFFEGVQI-KFDRLDLDARRY 423

Query: 736 NIDG---------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
           ++           G L ITN  F ++G Y CV ++ +  IST   + V GPPG  GG+ V
Sbjct: 424 DVSQLLRPYGRYFGTLRITNIQFENSGNYSCVAETPLSSISTGGLIRVAGPPGPCGGLMV 483

Query: 787 ---VEVHKTSATIQWTDGATNGRPITHYKIIART------NWNSTWFNVSEHVIGKEVDR 837
              +  H+ + T  WT G T+  PIT + I A         W     N+S  +   E   
Sbjct: 484 DPQIGTHRVNVT--WTVGNTHLSPITAFTIEANAKLDPPEKWTVVVSNLS--ITATEELL 539

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
             GR+ A +EN L     Y  +V A N LG G PS PS  + T A  P + P  I GGGG
Sbjct: 540 PLGRRMAFVEN-LASNMAYRLRVRAINALGIGAPSPPSLWFTTLATAPTKMPQNITGGGG 598

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEYGNVGIAVVRIP 952
           K G L   W PL     N P+  Y+   R K + E+    L      E G      + + 
Sbjct: 599 KHGTLVFQWVPLSPVDYNGPDFRYRAHIRAKGNNEYGIYELWNTKPLEGGKFLQYTLTLG 658

Query: 953 SEFYYTEYEVKVQAINDVGPGPESE 977
              YY  YE++++A+N +G GP ++
Sbjct: 659 ENLYYKPYEIRMEAVNKMGAGPITD 683


>gi|149058631|gb|EDM09788.1| neurofascin, isoform CRA_d [Rattus norvegicus]
          Length = 1189

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 226/844 (26%), Positives = 359/844 (42%), Gaps = 100/844 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NG+ L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATI 796
            G Y C+  + + +   K  + V               +G P  P  +++ ++ + S  +
Sbjct: 598 QGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRL 657

Query: 797 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
            W  G  N  PIT Y +     +    F      +  +  ++ G   +++ + L P+  Y
Sbjct: 658 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNY 709

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+W P+       
Sbjct: 710 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 769

Query: 917 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 974
           PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G GP
Sbjct: 770 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 822

Query: 975 ESEV 978
           E E 
Sbjct: 823 EPET 826


>gi|328705404|ref|XP_003242788.1| PREDICTED: neuroglian-like [Acyrthosiphon pisum]
          Length = 1128

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 221/799 (27%), Positives = 350/799 (43%), Gaps = 51/799 (6%)

Query: 190 PYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  IK+P+  +++F ++     ND    + C A G P P Y W K     D    +  D 
Sbjct: 32  PNIIKEPSTNELLFQVATDQYSNDKPFIIDCEAEGEPVPKYRWMKNGKNFDWQAYD--DR 89

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
           ++ K      G+L++  PR  ED G Y C A N +G   S+SV +    +  F+ +    
Sbjct: 90  IAQKP---GSGSLVVIKPRD-EDLGQYQCFAENSWGIATSKSVMVVKAELNLFSNEPNLY 145

Query: 306 IGNQNWGK--AMFCDPPTNYPG--VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI 361
           I  Q  G+   + C PPT +P   VN+    +   N V+   R+ V  +G L+FS + Q 
Sbjct: 146 IDAQE-GEPFKLSCHPPTAWPKPVVNWLKKNENGTNAVDSS-RITVDPEGNLWFSYVTQH 203

Query: 362 DAGN-YSCNVQSKVSDTGRNG-PFFPLKVFPHSNFQQLKFP--NNFPKTFPEAPKAGDKV 417
           DA + Y C  +S +    + G P +   +       Q K+P    +     E       V
Sbjct: 204 DANSEYHCYAKSLIMSEFKYGNPVYINVIQTAGTLLQNKYPPVRQYVNRRNEVALLNKAV 263

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN--AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
            L C+  G P+P   W + G  +  N     +N+ +   I  V  ED+G+Y C  SN   
Sbjct: 264 ELFCIYGGSPLPQTIWLKDGRAIQFNERIILKNYGKSFIIRKVNFEDRGKYTCEVSNGVG 323

Query: 476 ALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
             ES ++ + + A P+FTI                CEA G P  +  W  NG  LN E  
Sbjct: 324 LPESYNIVLDVMAVPSFTIIPQIVEGGEGETAVIKCEASGNPQPSIKWIHNGRPLN-EAS 382

Query: 535 PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
           P     R  +  N +TI  L  + D   Y C A N +   Y    + VL L P   +   
Sbjct: 383 P---NPRRSVTSNCITITSLT-KNDTGNYGCNATNSIGYVYKDVYINVLALAPEIVELSQ 438

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 654
             +T+  EG    I C     PKP   W K+ NI  +GGR    +NG+L I  +S  D+G
Sbjct: 439 NVKTF--EGSTTVIKCKSSGVPKPHTKWTKN-NIEITGGRYTTLDNGDLQIRGISFTDAG 495

Query: 655 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
           IY C ATN +G   +   L V        + P    + +   +  +C+A  +  L++  +
Sbjct: 496 IYICIATNNYGTANASVTLTVKEHTKIITE-PEDNVVVSGSMVTFQCTAIADHSLNLKIV 554

Query: 715 WTHNGVRIGNMDLNELETPN-INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           W  N     N  +N    P  +  +   + IT     D+G Y C+ K+ + ++S   T+I
Sbjct: 555 WLAN-----NEPINYYTQPRYVKNNDHSMTITKTIELDSGIYTCLAKTELDQVSANATLI 609

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIG 832
           V+  P  P  ++++  +  +A ++W     N   I  Y +   T+++  TW   S++V  
Sbjct: 610 VQDKPNPPTVLEII-CNNRNAVVKWKSMGDNRARIIRYTVEYNTSFDPGTWLVASDNVPA 668

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
             ++             + PW+ + F+VIA N +G   PS  S    T  D PY+ P  I
Sbjct: 669 SNLELIVP---------MTPWANFTFRVIAKNNVGKSNPSLHSSVCTTQPDVPYKNPENI 719

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                +   L ISW P+P+   NAP + Y+++W++    E  +   KE  N  I  + IP
Sbjct: 720 EAYSVEPSKLVISWTPMPKICHNAPGLRYRVYWKQNILGEVWN--FKEITNYTINKLSIP 777

Query: 953 SEFYYTEYEVKVQAINDVG 971
           ++     Y+VK+ A N+ G
Sbjct: 778 NQPIDKHYKVKIVAFNEKG 796


>gi|149058629|gb|EDM09786.1| neurofascin, isoform CRA_b [Rattus norvegicus]
          Length = 1200

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 231/861 (26%), Positives = 365/861 (42%), Gaps = 107/861 (12%)

Query: 173 TYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE 231
           ++  G  IE P  + + P   KQ   D + D       ++I + C A G P PS+ W + 
Sbjct: 34  SWSLGGAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNPAPSFHWTR- 87

Query: 232 DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESV 288
                R      DP    R     G L+I+     R  E  G Y C A NKFG+ +S  +
Sbjct: 88  ---NSRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRI 142

Query: 289 QLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV 345
           +L         + NL   P +  +     + C+PP   P    +W        + +DKRV
Sbjct: 143 RLQVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRV 199

Query: 346 FVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPN 401
              ++G LYFS  + Q    +YSCN +   + T +    F LKV    P+++      P+
Sbjct: 200 SQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPD 259

Query: 402 NFPK----------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-A 444
            +             +P+   +      G  + LEC+A G P P   W ++G  LP + A
Sbjct: 260 IYSARGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA 319

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
            FENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    
Sbjct: 320 KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGE 379

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 561
           D    C A G P  T  W  NG+ L S       +   D    +D  ++ R        A
Sbjct: 380 DGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 431

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           +YQC   N+     ++A + VL + P     P              + C    +P P   
Sbjct: 432 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 490

Query: 622 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 678
           W K+G   GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   
Sbjct: 491 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 547

Query: 679 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 736
           P+   ++P          +QL C    +  L +   W  +   + IGN    E ++    
Sbjct: 548 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 603

Query: 737 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLP 781
                L I   +  D G Y C+  + + +   K  + V               +G P  P
Sbjct: 604 -----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRP 658

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYT 839
             +++ ++ + S  + W  G  N  PIT Y +    +      W + S         ++ 
Sbjct: 659 RDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHS---------KFP 709

Query: 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
           G   +++ + L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS + G G + 
Sbjct: 710 GSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRK 768

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYY 957
            ++ I+W P+       PN+ Y + WR++       ET + + NV +   R  +     Y
Sbjct: 769 NNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVY 821

Query: 958 TEYEVKVQAINDVGPGPESEV 978
             YE++VQA ND G GPE E 
Sbjct: 822 VPYEIRVQAENDFGKGPEPET 842


>gi|444706383|gb|ELW47725.1| Neurofascin [Tupaia chinensis]
          Length = 1333

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 225/824 (27%), Positives = 349/824 (42%), Gaps = 77/824 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
              ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 319 TRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 375

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 376 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 432

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 433 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 490

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L ++ 
Sbjct: 491 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLSI 549

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + I N    E ++         L I   +  D G Y CV  + + +   K  
Sbjct: 550 SWLKDDGPLYISNRMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAY 600

Query: 772 VIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
           + V               +G P  P  +++ ++ + S  + W  G  N  PIT Y +   
Sbjct: 601 LTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV--- 657

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             +    F      +  +  ++ G   ++I   L P+  Y+F+VIA NE+G   PS PS 
Sbjct: 658 -QFEEDQFQPG---VWHDHSKFPGSVNSAILQ-LSPYVNYQFRVIAVNEVGSSHPSLPSE 712

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 936
           +Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++       E
Sbjct: 713 RYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------E 765

Query: 937 TLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           T   + N  +   R  +     Y  YE++VQA ND G GPE E 
Sbjct: 766 TRDTWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPET 809


>gi|237858625|ref|NP_001153785.1| neurofascin isoform 2 precursor [Rattus norvegicus]
          Length = 1189

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 226/844 (26%), Positives = 359/844 (42%), Gaps = 100/844 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 259 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NG+ L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 379 VQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 430

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 431 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 487

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 488 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 546

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 547 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 597

Query: 752 AGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATI 796
            G Y C+  + + +   K  + V               +G P  P  +++ ++ + S  +
Sbjct: 598 QGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRL 657

Query: 797 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
            W  G  N  PIT Y +     +    F      +  +  ++ G   +++ + L P+  Y
Sbjct: 658 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNY 709

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+W P+       
Sbjct: 710 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 769

Query: 917 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 974
           PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G GP
Sbjct: 770 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 822

Query: 975 ESEV 978
           E E 
Sbjct: 823 EPET 826


>gi|431892899|gb|ELK03327.1| Neurofascin [Pteropus alecto]
          Length = 1270

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 222/823 (26%), Positives = 351/823 (42%), Gaps = 81/823 (9%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP  +     K  I++   +I + C A G P PS+ W +      R      DP    
Sbjct: 21  LSQPPTITKQSVKDHIVDPRDNILIECEAQGNPAPSFHWTR----NSRFFNVAKDPRVSM 76

Query: 250 RFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNLKRA 303
           R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL   
Sbjct: 77  R--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLD-- 132

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
           P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + Q  
Sbjct: 133 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVMVQDM 191

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLE 420
             +YSCN +   + T +    F LKV       +      +P+    +     G  + LE
Sbjct: 192 QTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLE 251

Query: 421 CVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           C+A G P P   W ++G  LP + A FENFN+ L I N+  ED GEY C ASN   ++  
Sbjct: 252 CIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNISEEDSGEYFCLASNKMGSIRH 311

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
           ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S      + 
Sbjct: 312 TISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP---PNP 368

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           +R    D ++        R  A+YQC   N+     ++A + VL + P     P      
Sbjct: 369 NREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIR 425

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D GIY
Sbjct: 426 VILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIY 483

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +   W 
Sbjct: 484 TCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVTKRGTTVQLECRVKHDPSLKLTVSWL 542

Query: 717 HNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
            +   + IG+    E ++         L I   +  D G Y C+  + + +   K  + V
Sbjct: 543 KDDEPLYIGSRMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTV 593

Query: 775 ---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 819
                          +G P  P  +++ ++ + S  + W  G  N  PIT Y +    + 
Sbjct: 594 LADQTTPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQ 653

Query: 820 --NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                W + S         ++ G   +++   L P+  Y+F+VIA NE+G   PS PS +
Sbjct: 654 FQPGVWHDHS---------KFPGSVNSAVLQ-LSPYVNYQFRVIAVNEVGSSHPSLPSER 703

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 937
           Y T    P   PS + G G +  ++ I+W P+       PN+ Y + WR++       ET
Sbjct: 704 YRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ET 756

Query: 938 LKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
            + + NV +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 757 RETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 799


>gi|410986307|ref|XP_003999452.1| PREDICTED: neurofascin isoform 4 [Felis catus]
          Length = 1190

 Score =  256 bits (655), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 227/846 (26%), Positives = 358/846 (42%), Gaps = 104/846 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 29  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 84

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 85  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 142

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 143 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 199

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 200 QDMQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 259

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 260 YPQGTASSQMVLRGMDLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 319

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 320 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 379

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NGE L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 380 VQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 431

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 432 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 488

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 489 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 547

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 548 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 598

Query: 752 AGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATI 796
            G Y CV  + + +   K  + V               +G P  P  +++ ++ + S  +
Sbjct: 599 QGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRL 658

Query: 797 QWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
            W  G  N  PIT Y +    +      W + S         ++ G   +++   L P+ 
Sbjct: 659 TWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHS---------KFPGSVNSAVLQ-LSPYV 708

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            Y+F+VIA NE+G   PS PS +Y T    P   P+ + G G +  ++ I+W P+     
Sbjct: 709 NYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSA 768

Query: 915 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGP 972
             PN+ Y + WR++       ET + + NV +   R  +     Y  YE++VQA ND G 
Sbjct: 769 FGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGK 821

Query: 973 GPESEV 978
           GPE + 
Sbjct: 822 GPEPDT 827


>gi|338714497|ref|XP_003363093.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Equus caballus]
          Length = 1171

 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 225/860 (26%), Positives = 370/860 (43%), Gaps = 82/860 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           ME LL      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEMLLSGRGLIISLIFFLL------KFSTAIEIPLSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQ 265
                + C A G P P++ W K+D   +         LSD +  +S   G   I N+   
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDDKPFN---------LSDPQIIVSNNSGTFKIPNEGHI 100

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
              +G Y C ASNK G  +SE ++     + +F  ++   +  +  G A+   C+PP   
Sbjct: 101 SHFQGKYRCFASNKLGVAVSEEIEFIVPNVPKFPKEKIEPLEVEE-GDAIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN---------FQQLKFPNNFPKTFPEAPKAG----------DKVRLEC 421
           P    +    H N          +        P+     P++G          + + LEC
Sbjct: 219 PMKLTVNSLKHVNDSSSSTEIGSKANSIKQRKPRLLLPPPESGGESSLTILKGETLLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV   D+G Y C A+N   +    
Sbjct: 279 FAEGLPTPQVDWNKLGGDLPKGRETKENYGKTLKIENVSYRDKGIYRCTANNFLGSATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             I+++  P +T           +     CEA G P+ T  W  NG  +  E  P     
Sbjct: 339 FHITVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSPI--EKNPFAGD- 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
              +    ++   L P    A+YQC A N   T  ++A + V+ ++P  +    + E YA
Sbjct: 396 --VVSSREISFTNLQPNHT-AVYQCEASNAHGTILANANIDVVDVRPLIQTE--DEENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  ++C   ++P+    W+K        GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLYCEFFSSPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    +     L+LRC +  +  L   +   W+
Sbjct: 511 WVENAKGKTAVTANLDIRNA-TKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C  ++ +  ++  T V +  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTILD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
            P  P  + + E    S  + W  G  +   I+ Y +    N         E    +E+ 
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGN-------KEEPGRWEELT 679

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
           R  G KE ++   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I    
Sbjct: 680 RVQG-KETTVLLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQA 738

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEF 955
            +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +  
Sbjct: 739 SQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPT 792

Query: 956 YYTEYEVKVQAINDVGPGPE 975
            Y  Y+V+VQA+N +G GPE
Sbjct: 793 VYAPYDVQVQAVNHLGSGPE 812



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 141/590 (23%), Positives = 228/590 (38%), Gaps = 65/590 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENF--NRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+ +N +  +   +R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPEPTIKWRVNGSPIEKNPFAGDVVSSREISFTNLQPNHTAVYQCEASNAHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +  +    I   D+  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDV-VDVRPLIQTEDE--ENYATVVGYSAFLYCEFFSSPEAIVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE + RY I +N         E D   Y C  +N       +A L +     L + 
Sbjct: 478 EAKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVENAKGKTAVTANLDIRNATKLRIS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   + P  S T      +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 PKNPRVP-RSHTLELRCEST---CDSYLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIYSC+A           ++ +L  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          LL +  A +    ++  +  + 
Sbjct: 651 GDDHNSNISEYIVEFEGNKEEPGRWEELTRVQGKETTVLLSL--APYVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ +V A N LG G P
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPTVYAPYDVQVQAVNHLGSG-P 811

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
              S    +  D P  AP   G        + ++W  +P+++ +     Y+I W K    
Sbjct: 812 EPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKDRVHGHLKGYQINWWKTKSL 871

Query: 932 EFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                  KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 872 LDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|198467260|ref|XP_001354326.2| GA14061 [Drosophila pseudoobscura pseudoobscura]
 gi|198149415|gb|EAL31379.2| GA14061 [Drosophila pseudoobscura pseudoobscura]
          Length = 1309

 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 218/803 (27%), Positives = 354/803 (44%), Gaps = 55/803 (6%)

Query: 190 PYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  IKQP   +++F +++++  +D    + C A G P P Y W K     D    +    
Sbjct: 28  PRIIKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYD---- 83

Query: 246 LSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
             D+     G G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + A 
Sbjct: 84  --DRMLRQPGRGTLVITSPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAK 140

Query: 305 EIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSALEQ 360
            +        M  C  P  +P     W  +      ++   + R+ +  +G L+FS + +
Sbjct: 141 TVVAVEGEPFMLKCAAPDGFPSPTVNWMMQQSIDGSIKSINNSRMTLDPEGNLWFSNVTR 200

Query: 361 IDAGN---YSCNVQSKVSDTGR--NGPFFPLKVFPHSNFQQLKFP-NNFPKTFPEAPKAG 414
            DA +   Y+C+  S      +  N     +K    S  Q    P   +          G
Sbjct: 201 DDASDDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHQPIRQYVSRRQSLALRG 260

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASN 472
            ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  SN
Sbjct: 261 KRMELFCIYGGTPLPQTVWSKDGHRIQWSDRITQGHYGKSLIIRQTNFDDNGTYTCDVSN 320

Query: 473 DRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
                +S S+ + + A P FT+    K      ++ + CEA G P+   SW  NG+ +  
Sbjct: 321 GVGNAQSFSIILEVNAIPYFTVEPDFKTAAEDEEVVFQCEAAGFPEPKISWIHNGKPIEQ 380

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
            T       R  + DN  TIR +N  + D   Y C A N L   Y    L V  L P  +
Sbjct: 381 ST----PNPRRTVTDN--TIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIE 434

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
           + P    T   +G NVT+ C    APKP+  W +  N + +GGR  +  NG+L I  V+ 
Sbjct: 435 EPPTALSTV--DGRNVTLRCRVTGAPKPQVRWLRATNWL-TGGRYIVQANGDLQILDVTF 491

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D+G Y+C A N  G   ++G L V+   +   Q P    +AA ++   RC+   +  L+
Sbjct: 492 SDAGQYTCYAENKFGNKSAEGSLTVMEH-TRITQEPQNYEVAAGQSATFRCNEAHDGNLE 550

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           +   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + K 
Sbjct: 551 IEIDWWKDGQPI---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATAKA 606

Query: 771 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEH 829
            +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    E 
Sbjct: 607 NLIVQDVPNAPK-LTGITCQADKAEIMWEPQGDNRSPILHYTIQFNTSFTPASWDTAFEK 665

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
           V   +          S    + PW+ Y F+VIA N++G  +PS+ S    T  D P++ P
Sbjct: 666 VPNTDF---------SFVVQMSPWANYTFRVIAFNKIGASQPSAHSESCTTQPDVPFKNP 716

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 948
             + G G +  +L ISW P+P  + NAP   Y++ W++      ++++ + E+    I +
Sbjct: 717 DNVVGQGTEPNNLVISWTPMPEIEHNAPKFQYRVSWKRDIPAAAWENKDINEWHQNNIVI 776

Query: 949 VRIPSEFYYTEYEVKVQAINDVG 971
              P+   + +Y +KV AIN+ G
Sbjct: 777 TDQPT---FVKYHIKVVAINERG 796


>gi|348510471|ref|XP_003442769.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Oreochromis niloticus]
          Length = 1348

 Score =  256 bits (654), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 218/810 (26%), Positives = 348/810 (42%), Gaps = 97/810 (11%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRGSY 272
           C A G P P + W K D           DP  D R      SG  +I N+    E +G+Y
Sbjct: 61  CEAKGNPEPEFRWTKND--------QEFDPFLDPRLMKEENSGTFVIPNNGNLTEYQGTY 112

Query: 273 HCKASNKFGSIISESVQLAFGFIGEFNLKRA-PEIGNQNWGKAMFCDPPTNYPGVNYYWA 331
            C ASNK G  IS+ ++     + +F  +   P +  +     + CDPP   P +  YW 
Sbjct: 113 RCYASNKLGIAISKEIEFIVPNVPKFPKETLDPVVVEEGQPFTLKCDPPNGIPPLQIYWM 172

Query: 332 RDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSC------------------NVQS 372
                  +E+D+RV V  +G LYFS A+E+    +Y C                   V++
Sbjct: 173 TINL-QHIEQDQRVSVGLNGDLYFSHAVEKDSRRDYCCFASFPRIRTIVQKTAMSVIVKT 231

Query: 373 KVSDTGRNGPFF----PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
           + SD+  N        P  + P     +++               G+ + LEC+A G+P 
Sbjct: 232 RKSDSSENANAILERKPSLLTPPGGKSEIQL------------VKGEDLNLECIAEGFPT 279

Query: 429 PSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
           P   W + G   P    FEN  +++ +P  + ED G Y+C+A N    ++ + T++++  
Sbjct: 280 PQVEWKKMGHKFPSKVRFENHGKLVIVPRAEQEDSGNYMCKAKNPLGEVQHTFTVTVEEP 339

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P +      +     +D+   C A G+P  T +W  NG  L         ++R  I D  
Sbjct: 340 PEWVFEPESQLSMIGSDVHIKCSASGIPQPTTTWRVNGGPLQESPA----RNRRVIGD-- 393

Query: 549 LTIRYLNPE-RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNV 606
            TI   N +  D A+YQC A N+  T  S+A + ++ L+P       E E Y+  E   V
Sbjct: 394 -TIVIHNAQVSDSAVYQCEASNRHGTILSNANIMIMNLQPMILTS--EGEEYSVVERKGV 450

Query: 607 TIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHG 665
           T+ C   ++P     W KD +     G R  + ENG+L I  V R D+G Y+C A N  G
Sbjct: 451 TMHCKVFSSPPSTITWSKDDSPESVHGPRFTVHENGSLKIYNVERGDTGQYTCLAKNTEG 510

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIG 723
                  L V   P+     P    I      QL C A  ++    D   +W  + + I 
Sbjct: 511 SSAINAMLYV-KDPTRIVVAPEDQRILIGTTAQLSCLAEYDKSFSNDFELLWEKDDMEIA 569

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS------------TVGKISTKTT 771
              LN        ++ G+  I N S +D G Y CV K+             +G+++ +  
Sbjct: 570 ---LNYTVNSRYFVENGVFHIMNVSHSDQGVYRCVAKTPADQDVASALLMVLGELTCERC 626

Query: 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEH 829
                 P  P  + + +    + T++W  G  +    T + I    ++W  S W      
Sbjct: 627 FCFGDVPDAPENLVLSDRKGRNVTLKWVPGDDHNSSTTEFIIEYEESHWEPSNW------ 680

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
              KE+ R  G +  S E  L     Y F+V A N +G G PS  + +Y TP + P + P
Sbjct: 681 ---KELLRVPGNRN-SAELRLNGNVDYCFRVSAVNAVGTGRPSEATERYKTPPEAPDRNP 736

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAV 948
             I   G    ++ I WEPL   + N P++ YK+ +R+++ + +++  T+K +  V   V
Sbjct: 737 ENIRIEGHLPHEMDIKWEPLLPIEHNGPSLEYKVSYRRQDVEEDWKEHTVKRHSFV---V 793

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              P+   +  YE+K+QA N  G GPE ++
Sbjct: 794 RNTPT---FVPYEIKIQAKNRQGFGPEPKL 820



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 139/382 (36%), Gaps = 39/382 (10%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           D+ L C A G+P P  EW K  +     V          RF  + G L+I    + ED G
Sbjct: 267 DLNLECIAEGFPTPQVEWKKMGHKFPSKV----------RFE-NHGKLVIVPRAEQEDSG 315

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYW 330
           +Y CKA N  G  +  +  +      E+  +   ++        + C   +  P     W
Sbjct: 316 NYMCKAKNPLGE-VQHTFTVTVEEPPEWVFEPESQLSMIGSDVHIKCS-ASGIPQPTTTW 373

Query: 331 ARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390
             +  P   E   R        +     +  D+  Y C        + R+G         
Sbjct: 374 RVNGGP-LQESPARNRRVIGDTIVIHNAQVSDSAVYQCEA------SNRHGTILSNANIM 426

Query: 391 HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL----PRNAYF 446
             N Q +   +   + +    + G  V + C  F  P  +  W++  SP     PR    
Sbjct: 427 IMNLQPMILTSEG-EEYSVVERKG--VTMHCKVFSSPPSTITWSKDDSPESVHGPRFTVH 483

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           EN +  L I NV+  D G+Y C A N   +   +  + ++      +   D+ +      
Sbjct: 484 ENGS--LKIYNVERGDTGQYTCLAKNTEGSSAINAMLYVKDPTRIVVAPEDQRILIGTTA 541

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSE-----TLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             +C A    +   S+  + ELL  +      L      RYF+++ V  I  ++   D  
Sbjct: 542 QLSCLA----EYDKSFSNDFELLWEKDDMEIALNYTVNSRYFVENGVFHIMNVS-HSDQG 596

Query: 562 MYQCRAKNQLKTRYSSAQLRVL 583
           +Y+C AK       +SA L VL
Sbjct: 597 VYRCVAKTPADQDVASALLMVL 618



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 116/294 (39%), Gaps = 43/294 (14%)

Query: 193 IKQPTDVVFD-LSKRSIL-NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKR 250
           +++P + VF+  S+ S++ +D+ + C A G P P+  W        R+    +     + 
Sbjct: 336 VEEPPEWVFEPESQLSMIGSDVHIKCSASGIPQPTTTW--------RVNGGPLQESPARN 387

Query: 251 FTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQ 309
             + G  ++I++  QV D   Y C+ASN+ G+I+S +  +              E    +
Sbjct: 388 RRVIGDTIVIHNA-QVSDSAVYQCEASNRHGTILSNANIMIMNLQPMILTSEGEEYSVVE 446

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 369
             G  M C   ++ P     W++D  P  V    R  V  +G+L    +E+ D G Y+C 
Sbjct: 447 RKGVTMHCKVFSSPPST-ITWSKDDSPESV-HGPRFTVHENGSLKIYNVERGDTGQYTCL 504

Query: 370 VQSKVSDTGRNGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY 426
            ++    +  N   +   P ++      Q++                G   +L C+A  Y
Sbjct: 505 AKNTEGSSAINAMLYVKDPTRIVVAPEDQRILI--------------GTTAQLSCLA-EY 549

Query: 427 PVPSYN-----WTRRGSPLPRN-----AYFENFNRILTIPNVKVEDQGEYICRA 470
                N     W +    +  N      YF   N +  I NV   DQG Y C A
Sbjct: 550 DKSFSNDFELLWEKDDMEIALNYTVNSRYFVE-NGVFHIMNVSHSDQGVYRCVA 602


>gi|338714495|ref|XP_003363092.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Equus caballus]
          Length = 1225

 Score =  256 bits (654), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 225/862 (26%), Positives = 370/862 (42%), Gaps = 86/862 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           ME LL      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEMLLSGRGLIISLIFFLL------KFSTAIEIPLSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQ 265
                + C A G P P++ W K+D   +         LSD +  +S   G   I N+   
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDDKPFN---------LSDPQIIVSNNSGTFKIPNEGHI 100

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
              +G Y C ASNK G  +SE ++     + +F  ++   +  +  G A+   C+PP   
Sbjct: 101 SHFQGKYRCFASNKLGVAVSEEIEFIVPNVPKFPKEKIEPLEVEE-GDAIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN---------FQQLKFPNNFPKTFPEAPKAG----------DKVRLEC 421
           P    +    H N          +        P+     P++G          + + LEC
Sbjct: 219 PMKLTVNSLKHVNDSSSSTEIGSKANSIKQRKPRLLLPPPESGGESSLTILKGETLLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV   D+G Y C A+N   +    
Sbjct: 279 FAEGLPTPQVDWNKLGGDLPKGRETKENYGKTLKIENVSYRDKGIYRCTANNFLGSATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             I+++  P +T           +     CEA G P+ T  W  NG  +  E  P     
Sbjct: 339 FHITVEEPPRWTKKPQSGVYSTGSSGILLCEAEGEPEPTIKWRVNGSPI--EKNPFAGD- 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
              +    ++   L P    A+YQC A N   T  ++A + V+ ++P  +    + E YA
Sbjct: 396 --VVSSREISFTNLQPNHT-AVYQCEASNAHGTILANANIDVVDVRPLIQTE--DEENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  ++C   ++P+    W+K        GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLYCEFFSSPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    +     L+LRC +  +  L   +   W+
Sbjct: 511 WVENAKGKTAVTANLDIRNA-TKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C  ++ +  ++  T V +  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTILD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 834
            P  P  + + E    S  + W  G  +   I+ Y +    N      W         +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G KE ++   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQG-KETTVLLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGPE 975
              Y  Y+V+VQA+N +G GPE
Sbjct: 791 PTVYAPYDVQVQAVNHLGSGPE 812



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 141/590 (23%), Positives = 228/590 (38%), Gaps = 65/590 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENF--NRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+ +N +  +   +R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPEPTIKWRVNGSPIEKNPFAGDVVSSREISFTNLQPNHTAVYQCEASNAHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +  +    I   D+  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDV-VDVRPLIQTEDE--ENYATVVGYSAFLYCEFFSSPEAIVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE + RY I +N         E D   Y C  +N       +A L +     L + 
Sbjct: 478 EAKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVENAKGKTAVTANLDIRNATKLRIS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   + P  S T      +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 PKNPRVP-RSHTLELRCEST---CDSYLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIYSC+A           ++ +L  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          LL +  A +    ++  +  + 
Sbjct: 651 GDDHNSNISEYIVEFEGNKEEPGRWEELTRVQGKETTVLLSL--APYVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ +V A N LG G P
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPTVYAPYDVQVQAVNHLGSG-P 811

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
              S    +  D P  AP   G        + ++W  +P+++ +     Y+I W K    
Sbjct: 812 EPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKDRVHGHLKGYQINWWKTKSL 871

Query: 932 EFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                  KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 872 LDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|340714433|ref|XP_003395733.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Bombus terrestris]
          Length = 1251

 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 231/811 (28%), Positives = 358/811 (44%), Gaps = 57/811 (7%)

Query: 180 IENPDKIPRGPYFIKQPTD-VVFDLSKRSI-LND--ITLSCYAGGYPNPSYEWFKEDYVQ 235
           I++P +I + P     PTD  +F +++  I  ND    + C A G P P Y W K     
Sbjct: 19  IQSPPRISKQP-----PTDEQLFQVAQAKINENDKPFLIECEAEGEPAPRYRWIKNG--- 70

Query: 236 DRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                N   P  D R +     G L+I+ PR  ED G Y C A N++G   S SV +   
Sbjct: 71  ----KNFEWPAYDDRISQQPGRGTLVISRPRD-EDLGQYQCFAENEWGIATSNSVFVRKA 125

Query: 294 FIGEFNLKRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYD 350
            +  F  +    +  N+     + C PP  +P  N YW        ++   + R+ +  +
Sbjct: 126 ELNSFKDQNPISLDANEGQPFKLTCQPPDGWPKPNVYWLIQDTAGGIKSINNSRMTLDPE 185

Query: 351 GALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFP 404
           G L+FS + + DA +   Y+C   S   +  + G    L V     +  Q K+     + 
Sbjct: 186 GNLWFSNVTRNDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKYEPVKQYV 245

Query: 405 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVED 462
               E    G K  L C+  G P+P   W++ G  +  N      N+ + L I +V  +D
Sbjct: 246 SXKNEVALRGKKXELYCIHGGTPLPQIVWSKNGEVIRTNDRIMQGNYGKSLIIKHVNSKD 305

Query: 463 QGEYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
           +G Y C ASN     +S S+ + + A P FTI     +      + + C A GVP     
Sbjct: 306 EGTYTCEASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETVEFKCAANGVPVPEIK 365

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
           W  NG+ + SE  P     R  +  N + I  L  ++D   Y C A N L   Y    + 
Sbjct: 366 WIHNGKPI-SEAPP---NPRRKVTPNSIIIEKLT-KKDTGNYGCNATNSLGYVYKDVYVN 420

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641
           VL L+P   + P +  T   +G  V I C    APKP   W ++G  + +GGR K  ++G
Sbjct: 421 VLALEPEITQPPADIATV--DGKIVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSG 477

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L I  V   D+G Y+C A+N  G  E+ G L V       ++ P    +AA      RC
Sbjct: 478 DLEIENVIFLDAGTYTCHASNKFGEIEASGNLAVKEHTRITDE-PEDYEVAAGSTATFRC 536

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
           +A T+  L +   W  NG  I   D  E+E   I      L IT  +  D G Y CV  +
Sbjct: 537 NAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMITKTTELDTGTYTCVAHT 592

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 821
            + +   + T++V+  P  P  V V     ++ATI WT    N  PI  Y I   T++  
Sbjct: 593 ELDEAKAQATLVVQDVPNPPKLVSV-NCAGSTATIHWTPMGDNRAPILRYTIQHNTSFTP 651

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
             + +S+  +           E + +  + PW+ Y F+V+A N++G   PS  S    T 
Sbjct: 652 DTWEISKDPVPS--------TEQTYDVPMSPWANYTFRVLAWNKIGPSLPSPHSDVCTTL 703

Query: 882 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKE 940
            D P+  P  + G G    +L ISW  +P+ + NAP   Y++++R+    E +  E + +
Sbjct: 704 QDVPFTNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDIHD 763

Query: 941 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           +    + V   P+   Y  Y++KV AIN+ G
Sbjct: 764 WKKNNLVVDNQPT---YQRYKIKVVAINERG 791


>gi|1842429|gb|AAB47754.1| ankyrin binding cell adhesion molecule neurofascin [Rattus
           norvegicus]
          Length = 1217

 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 226/833 (27%), Positives = 357/833 (42%), Gaps = 81/833 (9%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 2   EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 57

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 58  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 115

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 116 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 172

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 173 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQ 232

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 233 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 292

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NG+ 
Sbjct: 293 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDP 352

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 353 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 407

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   +++NG+L I
Sbjct: 408 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYQNGSLEI 464

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 465 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 523

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y C+  + +
Sbjct: 524 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCMASTEL 574

Query: 764 GKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
            +   K  + V               +G P  P  +++ ++ + S  + W  G  N  PI
Sbjct: 575 DQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPI 634

Query: 809 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           T Y +     +    F      +  +  ++ G   +++ + L P+  Y+F+VIA NE+G 
Sbjct: 635 TDYVV----QFEEDQFQPG---VLHDHSKFPGSVNSAVLH-LSPYVNYDFRVIAVNEVGS 686

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI-YYKIFWRK 927
             PS PS +Y T    P   PS + G G +  ++ I+W P+       PN+ YY + WR+
Sbjct: 687 SHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYYIVKWRR 746

Query: 928 KNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +       ET + + NV +   R  +     Y  YE++VQA ND G GPE E 
Sbjct: 747 R-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPET 792


>gi|358438315|ref|NP_001240317.1| neural cell adhesion molecule L1-like protein isoform 3 precursor
           [Homo sapiens]
          Length = 1171

 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 228/864 (26%), Positives = 371/864 (42%), Gaps = 86/864 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL +    I  L +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLL-LGRGLIVYLMFLL-----LKFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKE 834
            P  P  + + E    S  + W  GA +   I+ Y +    N      W         +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGPESE 977
              Y  Y+VKVQAIN +G GP+ +
Sbjct: 791 PAVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|2190958|gb|AAB60937.1| neural cell adhesion molecule [Homo sapiens]
          Length = 1224

 Score =  256 bits (653), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 228/864 (26%), Positives = 371/864 (42%), Gaps = 86/864 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL +    I  L +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLL-LGRGLIVYLMFLL-----LKFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKE 834
            P  P  + + E    S  + W  GA +   I+ Y +    N      W         +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGPESE 977
              Y  Y+VKVQAIN +G GP+ +
Sbjct: 791 PAVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|195393480|ref|XP_002055382.1| GJ18818 [Drosophila virilis]
 gi|194149892|gb|EDW65583.1| GJ18818 [Drosophila virilis]
          Length = 1292

 Score =  256 bits (653), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 218/802 (27%), Positives = 358/802 (44%), Gaps = 53/802 (6%)

Query: 190 PYFIKQP--TDVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  IKQP   +++F +++++  +D    + C A G P P Y W K     D         
Sbjct: 28  PRIIKQPPTDELLFKVAQQNKESDKPFIIECEADGQPEPEYRWIKNGKKFDWQA------ 81

Query: 246 LSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
             ++     G G L+I  P+  ED G Y C ASN+FG   S SV +    +  F  + A 
Sbjct: 82  YDNRMLRQPGRGTLVITSPKD-EDLGQYQCFASNEFGVATSNSVFVRKAELNAFKDEAAR 140

Query: 305 EI-GNQNWGKAMFCDPPTNYPGVNYYW-ARDYFPNFVEE--DKRVFVSYDGALYFSALEQ 360
            +   +    ++ C+ P  +P     W  +      ++   + R+ +  +G L+FS + +
Sbjct: 141 SVEAVEGEPFSLQCEAPDGWPKPTVNWLIQQTIDAGIKSINNSRMTLDPEGTLWFSNVTR 200

Query: 361 IDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPKAG 414
            DA     Y+C+  S   +  + G    L V     +  Q ++P    +     E    G
Sbjct: 201 DDASGDFWYACSATSVFRNEYKIGNKILLDVKQMGVSASQNRYPPKRQYVTRKNEVALRG 260

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASN 472
            +V L C+  G P+P   W + G  +  N      N+ + L I     +D+G Y C  SN
Sbjct: 261 KRVELFCIYGGTPLPQTVWYKDGKRVEWNDRITQGNYGKSLVIRQANFDDEGTYNCDVSN 320

Query: 473 DRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE-LLN 530
                +S S+ + I A P FT     ++     ++ + C+A G P+ T  W  NG+ +  
Sbjct: 321 GVDQAQSYSINLKIHAIPYFTEEPEIQNAAEDEEVIFNCKAAGHPEPTIQWIHNGKPIAQ 380

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           SE  P     R  + +N + I  L  ++D   Y C A N L   Y    L VL L P  +
Sbjct: 381 SEPNP-----RRTVTNNYIKIVNL-VKKDTGNYGCNATNSLGYVYKDVYLNVLALPPEIQ 434

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
           + P    T  G   N+T+ C    APKP+  W+ + N + +GGR  +  +G+L I  V+ 
Sbjct: 435 EPPRAEATVNGR--NITMRCRVFGAPKPQVKWRHNNNWL-TGGRYNVLPSGDLEIQEVTF 491

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D+G Y+C A N  G   ++G L+V    +   Q P    +AA ++   RC+   ++ LD
Sbjct: 492 ADNGNYTCLAVNKFGNATAEGSLVVKER-TRITQEPQNYEVAAGQSATFRCNEAHDDTLD 550

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           +   W  +G  I   D  + E   +  +   L I      D+GEY CV ++ + + + K 
Sbjct: 551 LEIEWLKDGQPI---DF-DAEARFVKTNDNSLTIAKTMELDSGEYTCVARTQLDEATAKA 606

Query: 771 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEH 829
            +IV+  P  P  + ++      A I W     N  PI HY I   T++  ++W    E 
Sbjct: 607 NLIVQDVPNAPRLIGII-CQADKAKISWEPQGDNRSPILHYTIQFNTSFTPASWDTAYEK 665

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
           V   +          S    + PW+ Y ++VIA N++G   PS  S    T  D PY+ P
Sbjct: 666 VPSTDF---------SFVLQMSPWANYTYRVIAFNKIGPSPPSGHSEACTTQPDVPYKNP 716

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 949
             + G G +  +L I+W P+P  + NAPN  Y++ W++  D    +   K+  +     +
Sbjct: 717 DNVVGQGTEPTNLVITWTPMPEIEHNAPNFQYRVSWKR--DIPAATWENKDIYDWRQNNL 774

Query: 950 RIPSEFYYTEYEVKVQAINDVG 971
            IP +  + +Y +KV AIN+ G
Sbjct: 775 LIPDQPTFVKYHIKVVAINERG 796


>gi|119584273|gb|EAW63869.1| cell adhesion molecule with homology to L1CAM (close homolog of
           L1), isoform CRA_b [Homo sapiens]
          Length = 1224

 Score =  256 bits (653), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 228/864 (26%), Positives = 371/864 (42%), Gaps = 86/864 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL +    I  L +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLL-LGRGLIVYLMFLL-----LKFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKE 834
            P  P  + + E    S  + W  GA +   I+ Y +    N      W         +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGPESE 977
              Y  Y+VKVQAIN +G GP+ +
Sbjct: 791 PAVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|27894376|ref|NP_006605.2| neural cell adhesion molecule L1-like protein isoform 1 precursor
           [Homo sapiens]
          Length = 1224

 Score =  255 bits (652), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 228/864 (26%), Positives = 371/864 (42%), Gaps = 86/864 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL +    I  L +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLL-LGRGLIVYLMFLL-----LKFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFSWTKDGNPFYFTDHRIIPS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKE 834
            P  P  + + E    S  + W  GA +   I+ Y +    N      W         +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGPESE 977
              Y  Y+VKVQAIN +G GP+ +
Sbjct: 791 PAVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|326679087|ref|XP_001921978.2| PREDICTED: neurofascin-like [Danio rerio]
          Length = 1150

 Score =  255 bits (652), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 230/794 (28%), Positives = 345/794 (43%), Gaps = 68/794 (8%)

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
           ++ I + C A G P P + W +     +  VA   DP    R+  SG   I    R  + 
Sbjct: 46  VDPIIVECEATGNPPPVFTWTRNGVYLN--VAR--DPQVSMRWR-SGTLEIFFWGRPDDY 100

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGV 326
            G Y C A+N+FG+ +S  + L       + LK   E      G  +   C+PP   P  
Sbjct: 101 EGIYQCTATNEFGTALSSYINLRVSKARTW-LKEYLEPVTVVVGLPLILPCNPPEGPPKP 159

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFP 385
           + YW      + + +D+RV  S +G LYFS++   DA  NY C  +   ++T +  P   
Sbjct: 160 DTYWLNSTM-SPIRQDRRVSKSENGDLYFSSIVADDALTNYVCVARFPFTNTIQQKPPLI 218

Query: 386 LKVF-----PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
           L+V       H+  + LK P     T       G+++ LEC A G P PS  WT+    +
Sbjct: 219 LQVLTARMAAHTAPKFLK-PKGTAST--RIAMLGEELILECFAAGVPTPSIKWTKDYEEM 275

Query: 441 PRNAY-FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 499
                  ENFN+ L I  + ++D G+YIC ASN   +L+  +T+ +++ P +        
Sbjct: 276 TMTGKKLENFNKTLRIKKIAMDDGGDYICTASNRMGSLDHIITVRVKSVPFWLEKPESLV 335

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR---YFIQDNVLTIRYLNP 556
           +      +  C A G+P     W  NGE       P+ D  R     +  + LT R + P
Sbjct: 336 LSRDDGGSMVCRADGIPRPQIQWLVNGE-------PISDAPRSPGRQVSGDTLTFRGVVP 388

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAA 615
           +   A++QC A N      ++A L V+ +KP         E +    GN+T+  C    +
Sbjct: 389 D-SAAVFQCNASNPYGYIMTNAFLAVMDMKPRLLGP--RDELFKTTEGNLTLLDCPYFGS 445

Query: 616 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           PKP   W K G     GGR +   NG L I      D G Y C A+NV G DE + +L V
Sbjct: 446 PKPVLRWSKGGVGTLEGGRYRTLPNGTLEIRNTKLQDQGAYVCVASNVIGRDEKEVQLEV 505

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLR-------CSAHTEELLDVAYIWTHNG--VRIGNMD 726
                   + P KI  A H  + +R       C    +  LDV   W  +   + +G   
Sbjct: 506 --------KEPIKIIRAPHNTVVIRGSLARFDCKIKFDTSLDVTVTWLKDKKFLILGRRM 557

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
             + E+         L I +    D G Y C VKS + +++T   + V   P  P  +++
Sbjct: 558 TKDEES---------LSIADVYRRDEGVYTCRVKSELEEVTTSAKLTVMDRPDPPTDLEI 608

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            +  + S  + WT G +N  PI  Y I    N  + ++ +      K +  Y G   + I
Sbjct: 609 SDPSERSVRLTWTPGLSNHSPIKEYLIQYTENLLADYWLLPSG--WKNLTSYPGSLNSVI 666

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI--GDLSI 904
              L P+  Y F+VIA N +G  +PS  S  Y T    P   P  I G G  +   ++ I
Sbjct: 667 LQ-LTPFVEYTFRVIAVNGIGPSKPSWASEYYQTGGAVPDAIPRNIQGLGYGVFRNNMEI 725

Query: 905 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 964
           SWEPL   + N P + Y ++WR+++      E  K Y         I     +T YE+KV
Sbjct: 726 SWEPLEYREWNGPKLGYMVWWRRRD----SREEWKNYTTYWWCSTIIYDTDTFTPYEIKV 781

Query: 965 QAINDVGPGPESEV 978
           QAIN  G GPES V
Sbjct: 782 QAINFFGYGPESPV 795



 Score = 39.7 bits (91), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           YE KV A N  GYG P SP     +  D+P  APS +     +   L++ WEP+ R    
Sbjct: 777 YEIKVQAINFFGYG-PESPVVIGYSGEDRPVAAPSELSVSDIESTTLTVHWEPVARADIM 835

Query: 916 APNIYYKI-FWRKKN 929
                YK+ +WR+ +
Sbjct: 836 GEIKEYKVYYWRESS 850


>gi|344277014|ref|XP_003410300.1| PREDICTED: neurofascin-like isoform 1 [Loxodonta africana]
          Length = 1189

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 223/841 (26%), Positives = 357/841 (42%), Gaps = 94/841 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGEPCPSFHWTR----NSRFFNVAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFM 258

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I N+ 
Sbjct: 259 YPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSHKAKFENFNKALRITNIS 318

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 319 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 378

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579
             W  NGE L S      + +R    D ++        R  A+YQC   N+     ++A 
Sbjct: 379 VQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAF 433

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRK 636
           + VL + P     P              + C    +P P   W K+G   GS   GG   
Sbjct: 434 VSVLDVPPRMLS-PRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYH 490

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
           ++ENG+L I  + ++D GIY+C ATN+ G  E++  L V   P+   Q+P    +     
Sbjct: 491 VYENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEV-KDPTRIYQMPEDQVVKRGTT 549

Query: 697 LQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
           +QL C    +  L +   W  +   + +GN    E ++         L I   +  D G 
Sbjct: 550 VQLPCRVKHDPSLKLTVSWLKDDEPLYVGNRMKKEDDS---------LTIFGVAERDQGS 600

Query: 755 YECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWT 799
           Y C+  + + +   K  + V               +G P  P  +++ ++ + S  + W 
Sbjct: 601 YTCIASTELDQDLAKAHLTVLADQATPTNRLALLPKGRPDRPRDLELTDLAERSVRLTWI 660

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
            G  N  PIT Y +     +    F      +  +  ++ G   +++   L P+  Y+F+
Sbjct: 661 PGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFR 712

Query: 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           VIA NE+G   PS PS +Y T    P   P+ + G G +  ++ I+W P+       PN+
Sbjct: 713 VIAINEVGSSHPSLPSERYRTSGAAPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNL 772

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
            Y + WR++       ET   + NV +   R  +     Y  YE++VQA ND G GPE +
Sbjct: 773 RYIVKWRRR-------ETRDTWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPD 825

Query: 978 V 978
            
Sbjct: 826 T 826


>gi|114585162|ref|XP_001136954.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 6
           [Pan troglodytes]
 gi|410288982|gb|JAA23091.1| cell adhesion molecule with homology to L1CAM (close homolog of L1)
           [Pan troglodytes]
          Length = 1225

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 227/863 (26%), Positives = 369/863 (42%), Gaps = 84/863 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      +  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPLLLGRGLIVSLIFFLL------KFSKAIEIPSSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED---YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265
                + C A G P P + W K+    Y  D  +    +         SG   I N+   
Sbjct: 53  ---FQIECEAKGNPEPIFSWTKDGNPFYFTDHRIMTSNN---------SGTFRIPNEGHI 100

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
              +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   P
Sbjct: 101 SHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLP 160

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGP 382
            ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  P
Sbjct: 161 PLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMP 219

Query: 383 F-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLECV 422
               +    H+N               +Q K     P T   +  +     G+ + LEC 
Sbjct: 220 MKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECF 279

Query: 423 AFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN         
Sbjct: 280 AEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDF 339

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            + ++  P +T           ++    CEA G P  T  W  NG  +++        D 
Sbjct: 340 HVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFA---GDV 396

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
            F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  + +  + E YA 
Sbjct: 397 VFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTK--DGENYAT 451

Query: 602 EGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCT 659
             G +  + C   A+P+    W+K   +    GRR  I+ENG L I+  + +D+G YSC 
Sbjct: 452 VVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCW 511

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTH 717
             N  G       L + +  +     P    I     L+L C +  +  L   +   W+ 
Sbjct: 512 VENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSK 570

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V   
Sbjct: 571 DGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDV 627

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEV 835
           P  P  + + E    S  + W  GA +   I+ Y +    N      W         +E+
Sbjct: 628 PDPPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EEL 678

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
            R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS ++ TP   P + P  I   
Sbjct: 679 TRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQ 737

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 954
             +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ + 
Sbjct: 738 ASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTP 791

Query: 955 FYYTEYEVKVQAINDVGPGPESE 977
             Y  Y+VKVQAIN +G GP+ +
Sbjct: 792 AVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 229/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 651 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|281345450|gb|EFB21034.1| hypothetical protein PANDA_019389 [Ailuropoda melanoleuca]
          Length = 513

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 227/453 (50%), Gaps = 24/453 (5%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P D++F     S    + L+C A G P P+Y W +            I+  SD
Sbjct: 81  GPVFVQEPDDIIFPTD--SDEKKVALNCEARGSPVPNYRWLRN--------GTEIELESD 130

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R++L  G  II++P + +D G Y C A+N FGSI+S    L F ++G F+ + R+    
Sbjct: 131 YRYSLVDGTFIISNPSEAKDFGHYQCLAANTFGSILSREAILQFAYLGNFSGRTRSAVSV 190

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  D G+Y
Sbjct: 191 REGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISRETGNLYISKVQSSDVGSY 250

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
            C V++ V++     P  PL +       +   K   +FP  F      G  V++EC A 
Sbjct: 251 ICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFP--FMVTAAKGTTVKMECFAL 308

Query: 425 GYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R        + 
Sbjct: 309 GNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGLYECRAENSRGKNSFRGQLQ 368

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           +   P++   L D  +D+ + L W C++ G P  TY W +NG       +PL  Q+R  +
Sbjct: 369 VYTYPHWVEKLNDTQLDSGSPLRWECKSTGKPRPTYRWLKNG-------VPLLPQNRIEV 421

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
            + +L I  +N + D  MYQC A+N+    Y+SA+L++L   P+F    L+      +G 
Sbjct: 422 VNGLLMIHSVN-QSDAGMYQCLAENKYGAIYASAELKILASAPTFVLNQLKKTIIVTKGQ 480

Query: 605 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
            V I C P+ +PKP   WKK    +    R ++
Sbjct: 481 EVIIQCKPQGSPKPTISWKKGDKAVRENKRLEV 513



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 145/378 (38%), Gaps = 31/378 (8%)

Query: 416 KVRLECVAFGYPVPSYNWTRRGSP--LPRNAYFENFNRILTIPN-VKVEDQGEYICRASN 472
           KV L C A G PVP+Y W R G+   L  +  +   +    I N  + +D G Y C A+N
Sbjct: 101 KVALNCEARGSPVPNYRWLRNGTEIELESDYRYSLVDGTFIISNPSEAKDFGHYQCLAAN 160

Query: 473 D-RSALESSVTISIQAEPNFT--IPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
              S L     +      NF+          + Q  +         P++ YSW  N    
Sbjct: 161 TFGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFN---- 216

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
              +   ED  R+  ++            D   Y C  KN +      +    LTL+   
Sbjct: 217 EFPSFVAEDSRRFISRETGNLYISKVQSSDVGSYICLVKNTVTNARVLSPPTPLTLRNDG 276

Query: 590 KKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641
                E +          A +G  V + C     P P   W K    I S  R +     
Sbjct: 277 VMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQA 335

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
            L I  V  DD+G+Y C A N  G +  +G+L V   P + E+L     + +   L+  C
Sbjct: 336 VLEIPNVQLDDAGLYECRAENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWEC 394

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
            +  +      Y W  NGV +  +  N +E  N     GLL I + + +DAG Y+C+ ++
Sbjct: 395 KSTGKP--RPTYRWLKNGVPL--LPQNRIEVVN-----GLLMIHSVNQSDAGMYQCLAEN 445

Query: 762 TVGKI--STKTTVIVEGP 777
             G I  S +  ++   P
Sbjct: 446 KYGAIYASAELKILASAP 463


>gi|47227360|emb|CAF96909.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 900

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/521 (31%), Positives = 255/521 (48%), Gaps = 35/521 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F ++P+D +F LS       + ++C A G P P Y W     V  R ++   DP   
Sbjct: 1   GPVFTQEPSDSIFPLSTED--KRVFINCRAKGNPPPHYRW----TVDGREISTESDP--- 51

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
             ++L+ GNL+I +P  V  RG Y C A+N FG+I+S   ++ F F+  F+ +++  I +
Sbjct: 52  -NYSLAEGNLLIKNPHVVNHRGVYQCIATNTFGTIVSRQAKVQFAFLENFS-RKSRSIVS 109

Query: 309 QNWGKA--MFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGN 365
              G+A  + C PP +Y  + Y W  +    F+++D R F+S   G LY + +E +DAGN
Sbjct: 110 VREGQAVVLLCGPPLHYGEIKYSWVFNGRRGFLQQDARRFISQRTGNLYIAKVEALDAGN 169

Query: 366 YSCNVQSKVSDTGRNGPFF--PLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLEC 421
           Y+C V++ ++    N   F  P  V    +    ++       FP+  +   G  V LEC
Sbjct: 170 YTCAVRNMMT----NATVFSSPTPVVVRGDAVMGEYEPKIEVQFPDTLRVSKGSSVTLEC 225

Query: 422 VAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G PVPS +W R  G+PLP      +   +L IP  + ED G Y C A N R    + 
Sbjct: 226 FALGNPVPSISWRRADGNPLPGKIKINHSTGVLEIPYFRPEDAGVYECVAENSRGLNVAR 285

Query: 481 VTISIQAEPNFTIPLTDKHMDNQ--ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
             +  Q   +     T K  D    A L W C+A G P   Y W +NG++L  E      
Sbjct: 286 GQLLFQNVEHLQWVHTPKDADIAIGASLQWECKAMGNPRPAYKWLKNGQILPKE------ 339

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
               +++   L+I  ++   D  MYQC A N+  + Y+SA+L+V+   P F  RP++  T
Sbjct: 340 -GEIYVEAGKLSITRISLS-DSGMYQCVAHNEHGSVYASAELKVVASPPDFTLRPVKKST 397

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG   + C P A+P+    W + G ++    R+ + ++G L I+ +S+ D G Y+C
Sbjct: 398 VVQRGGEAVLECRPYASPRAVTSWWRGGELLKDTERQTVMDDGTLRITNISKFDGGRYTC 457

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            A N  G   S G L+V   P   E L   +T  +   +QL
Sbjct: 458 VARNHFGTSSSTGTLVVKGPPGPPEAL--AVTDISDTTVQL 496



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 180/430 (41%), Gaps = 34/430 (7%)

Query: 453 LTIPNVKVEDQGEYICRASN---DRSALESSVTISIQA-------EPNFTIPLTDK-HMD 501
           L I  V+  D G Y C   N   + +   S   + ++        EP   +   D   + 
Sbjct: 157 LYIAKVEALDAGNYTCAVRNMMTNATVFSSPTPVVVRGDAVMGEYEPKIEVQFPDTLRVS 216

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             + +T  C A G P  + SW R      ++  PL  + +      VL I Y  PE D  
Sbjct: 217 KGSSVTLECFALGNPVPSISWRR------ADGNPLPGKIKINHSTGVLEIPYFRPE-DAG 269

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 620
           +Y+C A+N      +  QL    ++   +   P +++   G   ++   C     P+P +
Sbjct: 270 VYECVAENSRGLNVARGQLLFQNVEHLQWVHTPKDADIAIG--ASLQWECKAMGNPRPAY 327

Query: 621 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
            W K+G I+   G   + E G L I+ +S  DSG+Y C A N HG   +   L V+  P 
Sbjct: 328 KWLKNGQILPKEGEIYV-EAGKLSITRISLSDSGMYQCVAHNEHGSVYASAELKVVASPP 386

Query: 681 YYEQLPPKITIAAHRNLQ--LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 738
            +   P K +    R  +  L C  +       ++ W       G   L + E   + +D
Sbjct: 387 DFTLRPVKKSTVVQRGGEAVLECRPYASPRAVTSW-WR------GGELLKDTERQTV-MD 438

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
            G L ITN S  D G Y CV ++  G  S+  T++V+GPPG P  + V ++  T+  + W
Sbjct: 439 DGTLRITNISKFDGGRYTCVARNHFGTSSSTGTLVVKGPPGPPEALAVTDISDTTVQLSW 498

Query: 799 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
             G  N  P+T Y + A+T ++  W  V+   + K           +   +++ W     
Sbjct: 499 GSGPDNHSPVTMYMVQAKTPFSIGWQTVA--TVPKVAPVGVSGGGGARGELVITWEPVSE 556

Query: 859 KVIAGNELGY 868
           +  +G + GY
Sbjct: 557 EHQSGEDFGY 566



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 9/141 (6%)

Query: 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           I + P F KQP  +V+ +       ++  SC A G P PSY W        +L    I  
Sbjct: 728 ILQSPVFTKQPGSIVYPVETLERNKEVVFSCEAQGSPPPSYRW--------KLNGTEISS 779

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
                + LSGGNL IN   + +D G+Y C ASN FG+I+S    L F ++  F   R   
Sbjct: 780 KYGSHYILSGGNLRINRLNKDQDAGTYQCLASNSFGTIVSREASLTFAYLENFKTHRRSS 839

Query: 306 I-GNQNWGKAMFCDPPTNYPG 325
           +   +  G  + C PP +  G
Sbjct: 840 VFVREGQGVVLLCGPPPHSGG 860



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 6/113 (5%)

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
           ++   ++ ++CEA G P  +Y W  NG  ++S+         Y +    L I  LN ++D
Sbjct: 748 LERNKEVVFSCEAQGSPPPSYRWKLNGTEISSKY-----GSHYILSGGNLRINRLNKDQD 802

Query: 560 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
              YQC A N   T  S           +FK     S  +  EG  V + C P
Sbjct: 803 AGTYQCLASNSFGTIVSREASLTFAYLENFKTH-RRSSVFVREGQGVVLLCGP 854



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 82/206 (39%), Gaps = 25/206 (12%)

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FEN 640
           V T +PS    PL +E        V I C  +  P P + W  DG  I +          
Sbjct: 3   VFTQEPSDSIFPLSTEDK-----RVFINCRAKGNPPPHYRWTVDGREISTESDPNYSLAE 57

Query: 641 GNLLI-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHR 695
           GNLLI +P   +  G+Y C ATN  G   S+   +     ++ E    K    +++   +
Sbjct: 58  GNLLIKNPHVVNHRGVYQCIATNTFGTIVSRQAKVQF---AFLENFSRKSRSIVSVREGQ 114

Query: 696 NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
            + L C    H  E   + Y W  NG R     L +     I+   G L I      DAG
Sbjct: 115 AVVLLCGPPLHYGE---IKYSWVFNGRR---GFLQQDARRFISQRTGNLYIAKVEALDAG 168

Query: 754 EYECVVKSTVGK---ISTKTTVIVEG 776
            Y C V++ +      S+ T V+V G
Sbjct: 169 NYTCAVRNMMTNATVFSSPTPVVVRG 194



 Score = 46.2 bits (108), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 530 NSETLPLEDQDRYFIQDNVLTI----RYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
            S  L +   + Y I+   LT         P R P M          +R S  Q  V T 
Sbjct: 687 TSMALQIPSGENYLIEIKALTEGGDGSSSGPIRIPKM----------SRSSILQSPVFTK 736

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLL 644
           +P     P+E+     E   V   C  + +P P + WK +G  I S  G   I   GNL 
Sbjct: 737 QPGSIVYPVETLERNKE---VVFSCEAQGSPPPSYRWKLNGTEISSKYGSHYILSGGNLR 793

Query: 645 ISPVSRD-DSGIYSCTATNVHGMDESK 670
           I+ +++D D+G Y C A+N  G   S+
Sbjct: 794 INRLNKDQDAGTYQCLASNSFGTIVSR 820


>gi|195132305|ref|XP_002010584.1| GI16006 [Drosophila mojavensis]
 gi|193909034|gb|EDW07901.1| GI16006 [Drosophila mojavensis]
          Length = 1302

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 221/814 (27%), Positives = 355/814 (43%), Gaps = 68/814 (8%)

Query: 190 PYFIKQP--TDVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  IKQP   +++F +++++  +D    + C A G P P   W  +   + R + N    
Sbjct: 28  PRIIKQPPTDELLFKVAQQNKESDKPFIIECEADGQPEPDC-WLAKRGQRYRWIKN---- 82

Query: 246 LSDKRFTLSG-----------GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
              K+F               G L+I  P+  ED G Y C ASN+FG   S SV +    
Sbjct: 83  --GKKFDWQAYDNRMLRQPGRGTLVITSPKD-EDLGQYQCFASNEFGVATSNSVFVRKAE 139

Query: 295 IGEFNLKRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE------EDKRVFV 347
           +  F  + A  +   +    ++ C+ P  +P     W        V+       + R+ +
Sbjct: 140 LNAFKDEAARSVEAVEGEPFSLQCEAPDGWPKPTVNW---LIQQTVDAGIKSINNSRMTL 196

Query: 348 SYDGALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--N 401
             +G L+FS + + DA     Y+C+  S   +  + G    L V     +  Q ++P   
Sbjct: 197 DPEGTLWFSNVTREDASGDFWYACSATSVFRNEYKIGNKILLDVKQMGVSASQNRYPPKR 256

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVK 459
            +     E    G +V L C+  G P+P   W + G  +  N      N+ + L I    
Sbjct: 257 QYVTRKNEVALRGKRVELYCIYGGTPLPQTVWLKNGKRVEWNDRITQGNYGKSLVIRQAN 316

Query: 460 VEDQGEYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDV 518
            +D+G Y C  SN     +S S+ + I A P FT     ++     ++ + C+A G P+ 
Sbjct: 317 FDDEGTYSCDVSNGVGQAQSYSINLKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHPEP 376

Query: 519 TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 578
           T  W  NG+ +       E   R  + +N + I  L  + D   Y C A N L   Y   
Sbjct: 377 TIQWIHNGKPIEQS----EPNPRRTVTNNYIKIVNL-VKNDTGNYGCNATNSLGYVYKDV 431

Query: 579 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 638
            L VL L P  ++ P    T  G   N+T+ C    APKP+  W+ + N + +GGR  + 
Sbjct: 432 YLNVLALPPEIQEPPRAEATVNGR--NITMRCRVFGAPKPQVKWRHNHNWL-TGGRYTVL 488

Query: 639 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
            +G+L I  V+  D+G Y+C A N  G + ++G L+V    +   Q P    +AA ++  
Sbjct: 489 PSGDLQIQEVTFADNGNYTCLAVNKFGNETAQGSLVVKER-TRITQEPQNYEVAAGQSAT 547

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
            RC+   ++ LD+   W  +G  I   D    E   +  +   L I      D+GEY CV
Sbjct: 548 FRCNEAHDDTLDLEIEWLKDGQPI---DF-AAEARFVKTNDNSLTIAKTQELDSGEYTCV 603

Query: 759 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN 818
            ++ + + + K  +IV+  P  P  + +       A I W     N  PI HY I   T+
Sbjct: 604 ARTQLDEATAKANLIVQDVPNQPRLIGIT-CQADKAEISWEPQGDNRSPILHYTIQFNTS 662

Query: 819 WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
           +  ++W    E V   +          S    + PW+ Y F+VIA N++G  EPS  S  
Sbjct: 663 FTPASWDTAYEKVPSTDF---------SFVVQMSPWANYTFRVIAYNKIGPSEPSGHSDM 713

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 937
             T  D PY+ P  + G G +  +L ISW P+P  + NAPN  Y++ W++  D    +  
Sbjct: 714 CTTQPDVPYKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFQYRVSWKR--DIPAAAWE 771

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
            K+  N     + IP +  + +Y +KV AIN  G
Sbjct: 772 NKDIYNWRQDNLLIPDQPTFVKYHIKVVAINAKG 805


>gi|224809606|ref|NP_001139239.1| neurofascin precursor [Danio rerio]
 gi|224383688|gb|ACN42744.1| neurofascin neuronal isoform [Danio rerio]
          Length = 1369

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 221/820 (26%), Positives = 357/820 (43%), Gaps = 76/820 (9%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           +KQP  +V    K  I++   +I + C A G P P+++W        R      +   D 
Sbjct: 38  LKQPPTIVKQSLKDYIVDPRDNIIIECEAKGNPVPTFQW--------RRNGKFFNVGKDP 89

Query: 250 RFTLSG--GNLIINDPRQVED-RGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPE 305
           R T+    G L I    + ED  G Y C ASN  G+ IS  + L       +  +   P 
Sbjct: 90  RVTMRSRSGTLEIRSSGKPEDYEGEYQCFASNNLGTAISNKILLRVSKSPLWPKEVLEPV 149

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG- 364
              +     + C+PP   P    +W  D F   + +D+RV +  +G L+FS +   DA  
Sbjct: 150 TVREGSPLVLACNPPPGLPPPETFWM-DSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKT 208

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECV 422
           +YSCN + + + T +    + LKV    N  + +  +  P   P       G ++ LEC+
Sbjct: 209 DYSCNARFEFTHTIQQKNPYTLKVQTMRNIPETQPTSLSPTGLPSTKMVLRGGELLLECI 268

Query: 423 AFGYPVPSYNWTRRGSPLP-RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G P P+  W++RG  LP +     NF++ L I NV  ED G Y C ASN   ++  +V
Sbjct: 269 AAGVPTPTITWSKRGGDLPTKKVRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSIRHTV 328

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            + ++A P +     +  +         C A G P  T  W  NGE + S    L + +R
Sbjct: 329 EVQVKAAPFWLEKPINLVLAPDESGRLVCRANGSPKPTIQWLVNGEPIESS---LPNPNR 385

Query: 542 YFIQDNVL--TIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
             + D ++  T+++       A+YQC A N+     ++A + VL + P     P      
Sbjct: 386 RVLDDTIIFETVQF----ESSAVYQCNASNEHGYLLANAFVSVLDMAPRMLG-PKNQLIK 440

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIY 656
             E     + C    +P P   W K+G  +GSG   G  +++ NG L I     +D G Y
Sbjct: 441 VIENNRTFLECPFFGSPLPLLRWFKNG--LGSGLDGGHYRLYHNGTLEIKQARTEDQGTY 498

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A+++ G  E++ RL V   P+   + P   T      ++  C    +  L     W 
Sbjct: 499 TCVASSILGKMENQVRLEVKE-PTRIVRAPEHKTEPRGTTVRFDCRVKHDPSLPATVTWL 557

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 774
            +   +    +  L+      D   L I N +  D G Y C  K+ + + +    + V  
Sbjct: 558 KDEKPLSFSWIGRLKK-----DDESLTIYNVNPDDGGTYTCTAKTEIDEDTASARLTVTE 612

Query: 775 ------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN- 820
                        G P  P  +++ +    S  + W  G  N  P+TH+ +      W  
Sbjct: 613 NDSSSASNRSASAGRPDPPQDLELSDPSARSVRLTWVPGNENNSPVTHFLVQFEEDRWEP 672

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             W N+S +               S+   L P+  Y+F+VIA N +G  +PS PS +Y T
Sbjct: 673 GKWQNLSIY----------DWNLNSVNLQLSPFVNYQFRVIAINAVGQSQPSHPSARYQT 722

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 940
               P   PS + G G K  ++ I+W+ +   ++N PN+ Y + WR+K DTE      +E
Sbjct: 723 SGAPPDVVPSGLKGWGSKKNNMEITWQAMQNTERNGPNLRYVLSWRRK-DTE------EE 775

Query: 941 YGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + N+  A  +  + +   Y  YE+K+QA+ND G GPES +
Sbjct: 776 WNNITTAKTKHVVHNTDTYVPYEIKIQAVNDFGHGPESNM 815



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 153/669 (22%), Positives = 250/669 (37%), Gaps = 81/669 (12%)

Query: 348 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407
           ++D  L    + + D G+Y+C   +++    R+     +K  P        F    P   
Sbjct: 295 NFDKTLRILNVSEEDIGSYTCMASNRIGSI-RHTVEVQVKAAP--------FWLEKPINL 345

Query: 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNR-----ILTIPNVKVED 462
             AP   +  RL C A G P P+  W   G P+   +   N NR      +    V+ E 
Sbjct: 346 VLAPD--ESGRLVCRANGSPKPTIQWLVNGEPI--ESSLPNPNRRVLDDTIIFETVQFES 401

Query: 463 QGEYICRASNDRSALESSVTISI-QAEPNFTIPLTD--KHMDNQADLTWTCEAFGVPDVT 519
              Y C ASN+   L ++  +S+    P    P     K ++N       C  FG P   
Sbjct: 402 SAVYQCNASNEHGYLLANAFVSVLDMAPRMLGPKNQLIKVIENNRTFL-ECPFFGSPLPL 460

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579
             WF+NG  L S    L+        +  L I+    E D   Y C A + L    +  Q
Sbjct: 461 LRWFKNG--LGSG---LDGGHYRLYHNGTLEIKQARTE-DQGTYTCVASSILGKMEN--Q 512

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKDGNIIGSG--GRR 635
           +R+   +P+   R  E +T    G  V   C  +  P       W KD   +     GR 
Sbjct: 513 VRLEVKEPTRIVRAPEHKTEP-RGTTVRFDCRVKHDPSLPATVTWLKDEKPLSFSWIGRL 571

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL---------P 686
           K  ++ +L I  V+ DD G Y+CTA      D +  RL V    S              P
Sbjct: 572 KK-DDESLTIYNVNPDDGGTYTCTAKTEIDEDTASARLTVTENDSSSASNRSASAGRPDP 630

Query: 687 PK---ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 743
           P+   ++  + R+++L      E    V    TH  V+         +  N++I    L 
Sbjct: 631 PQDLELSDPSARSVRLTWVPGNENNSPV----THFLVQFEEDRWEPGKWQNLSIYDWNLN 686

Query: 744 ITNASFADAGEYE-------CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 796
             N   +    Y+        V +S     S +       P  +P G++     K +  I
Sbjct: 687 SVNLQLSPFVNYQFRVIAINAVGQSQPSHPSARYQTSGAPPDVVPSGLKGWGSKKNNMEI 746

Query: 797 QWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
            W    +   NG  + +     R +    W N++           T + +  + N    +
Sbjct: 747 TWQAMQNTERNGPNLRYVLSWRRKDTEEEWNNIT-----------TAKTKHVVHNTDT-Y 794

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
             YE K+ A N+ G+G  S+    Y+   DKP  AP+ +         ++I WEP+ +  
Sbjct: 795 VPYEIKIQAVNDFGHGPESNMVIGYSG-EDKPSAAPTDLRVSKINSTKVNIHWEPVEQSS 853

Query: 914 QNAPNIYYKI-FWRK----KNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAI 967
            N     YK+ +WR+    K     +++  K +         I +E Y Y++Y++ +   
Sbjct: 854 VNGEFKEYKLYYWREASLIKGLKVNRTKLHKGFFTTAENPSGILTELYPYSKYKMYMVVA 913

Query: 968 NDVGPGPES 976
           N    GP+S
Sbjct: 914 NREHEGPQS 922


>gi|345498258|ref|XP_003428190.1| PREDICTED: neuroglian-like isoform 2 [Nasonia vitripennis]
          Length = 1248

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 224/809 (27%), Positives = 366/809 (45%), Gaps = 55/809 (6%)

Query: 181 ENPDKIPRGPYFIKQPTD-VVFDLSKRSILND---ITLSCYAGGYPNPSYEWFKEDYVQD 236
           ++P +I + P     PTD ++F +++ S+  +     + C A G P P YEW K    +D
Sbjct: 20  QSPPRISKQP-----PTDELLFQVAQVSVNENEKPFLVECEAEGEPAPLYEWIKNG--KD 72

Query: 237 RLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 296
                  D +S +      G L+I+ PR  ED G Y C A N++G   S SV +    + 
Sbjct: 73  FKWQAYDDRISQQP---GRGTLVISKPRD-EDLGQYQCFAKNEWGIATSNSVFVRKAELN 128

Query: 297 EFNLKRAPEIGNQNWGK--AMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGA 352
            F   + P   + + G    + C PP  +P  N YW        ++   + R+ +  +G 
Sbjct: 129 SFK-DQNPVTLSVSEGDPYKLTCQPPDGWPKPNVYWLIQDHAGTIKSINNSRMTLDPEGN 187

Query: 353 LYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPH---SNFQQLKFPNNFPKT 406
           L+FS + ++DA +   Y+C   S   +  + G    L V      ++  + +    +   
Sbjct: 188 LWFSNVTKLDASDDYYYACAATSLFRNEYKLGNRVLLNVISTGSTASSNKREPVKQYVSR 247

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFE-NFNRILTIPNVKVEDQG 464
             E    G K+ L C+  G P+P   W++ G  + P +   E N+ + L I +V  +D+G
Sbjct: 248 KNEVALRGKKIELFCIFGGTPLPLTVWSKNGQRIRPNDRVTEGNYGKSLIIKHVNFDDEG 307

Query: 465 EYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWF 523
            Y C  SN   + +S S+ + + + P FT+     +      + + CEA GVP     W 
Sbjct: 308 TYTCDVSNGVGSAQSYSINLEVLSVPYFTVEPEIVNAAEDETVEFKCEATGVPKPEIKWI 367

Query: 524 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
            NG+ ++          R  +  N + I  L  + D   Y C A N L   Y    + VL
Sbjct: 368 HNGKPISEAPF----NPRRKVTPNSIIIEKL-LKNDTGNYGCNATNSLGYVYKDVYVNVL 422

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 643
            L+P   + P++  T   +G  + + C    APKP+  W ++G  + +GGR KI E+G+L
Sbjct: 423 ALEPEILQPPMDESTV--DGKTIRLTCRVFGAPKPEVKWVRNGQEL-TGGRYKILESGDL 479

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            I  V   D+G Y+C A+N  G   + G L V    +    +P    +AA      RC+A
Sbjct: 480 EIENVIFSDAGEYNCHASNKFGKVNATGFLAVKEH-TRITDVPEDYEVAAGATATFRCNA 538

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            T+  L++   W   G  I   D  E E   I      L IT  +  D+G Y CV ++ +
Sbjct: 539 VTDSTLELHIDWLSKGEPI---DF-EAEPRFIRSTDYSLMITKTTELDSGTYTCVARTDL 594

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-ST 822
            +   + T+IV+  P  P  +  V      A + WT    N  PI  Y I   T++   T
Sbjct: 595 DEARAQATLIVQDVPNSPT-LLGVSCTSNQAFVSWTPMGDNRSPILRYAIQYNTSFTPDT 653

Query: 823 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
           W    +HV   E  RY  +        + PW+ Y F+VIA N++G  +PS  S    T  
Sbjct: 654 WEYAKDHVPATE-QRYAVQ--------MSPWANYTFRVIAYNKIGPSQPSQHSHVCTTLP 704

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 942
           D PY  P  + G G    +L ISW  +P+ + NAP   Y++++++  D   +   ++E  
Sbjct: 705 DVPYNNPDNVMGRGDDPQNLVISWTVMPQIEHNAPKFKYQVYYKR--DIPGEDWRIEEIT 762

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           N     + I ++  Y +Y++KV A+N+ G
Sbjct: 763 NWKQNTLVINNQPTYQKYKIKVGALNEKG 791


>gi|29561787|emb|CAD87797.1| SI:dZ37K09.1 (contactin 2) [Danio rerio]
          Length = 510

 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 159/492 (32%), Positives = 235/492 (47%), Gaps = 23/492 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP+ +++          +TLSC A   P   Y W        R+    I    +
Sbjct: 33  GPVFEEQPSSLIYPEGMPE--GKVTLSCQARSSPAAVYRW--------RVNGTDISFAEE 82

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
             +T   GNL+IN+P+   D GSY C A N+ G+I+S    L FG++ +F  + R+P+  
Sbjct: 83  SHYTQVAGNLVINNPQNGRDGGSYQCLAINRCGTIVSRVANLKFGYLHDFPPESRSPQTV 142

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE-EDKRVFVS-YDGALYFSALEQIDAGN 365
           ++  G  + C PP +YP ++Y W  + FPNF++ E  R FVS   G LY +     D GN
Sbjct: 143 HEGMGTFLACQPPAHYPALSYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGN 202

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVA 423
           Y C     +  + ++     +++  H +    K   N    FP    A  G   +LEC A
Sbjct: 203 YFCFTTINMDVSTKSIFSKAVQLTVHPDASPRKTAPNIRVRFPAETYALSGQTAQLECFA 262

Query: 424 FGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           +G P+P   W +    LP          IL IP +  +D+G Y C   N          +
Sbjct: 263 YGNPIPKIRWRKVDGILPPKVGASVDGPILIIPELNFDDEGMYECEVYNSEGRETHQGRV 322

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           S+QA+P++   ++D  ++  ++L W+C A G P  T  W RNG  L +       QDR  
Sbjct: 323 SVQAQPDWLQVMSDSEVEISSELQWSCAAAGKPRPTIRWLRNGHALIT-------QDRVE 375

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           + +  L I  L  E D  MYQC A+N+  T YS+A+LRV    P F+  P+     A  G
Sbjct: 376 VNNGRLKIANLALE-DSGMYQCVAENKHSTIYSNAELRVQVQAPDFRLNPVRKLVPAARG 434

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           G V + C P AAPKP   W +   ++ +  R  +  +G L I  +SR D G Y+C A N 
Sbjct: 435 GQVKMECKPRAAPKPTLFWSRGTELLTNSTRITVTPDGILWIYNISRADEGKYTCFAENY 494

Query: 664 HGMDESKGRLIV 675
            G   S G L V
Sbjct: 495 LGKANSTGHLSV 506



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 130/337 (38%), Gaps = 31/337 (9%)

Query: 453 LTIPNVKVEDQGEYICRAS-----NDRSALESSVTISIQ--AEPNFTIP------LTDKH 499
           L + N +  D G Y C  +     + +S    +V +++   A P  T P        + +
Sbjct: 190 LYLANARANDTGNYFCFTTINMDVSTKSIFSKAVQLTVHPDASPRKTAPNIRVRFPAETY 249

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
             +       C A+G P     W +   +L  +     D         +L I  LN + D
Sbjct: 250 ALSGQTAQLECFAYGNPIPKIRWRKVDGILPPKVGASVDGP-------ILIIPELNFD-D 301

Query: 560 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 619
             MY+C   N         ++ V   +P + +   +SE        +   C     P+P 
Sbjct: 302 EGMYECEVYNSEGRETHQGRVSV-QAQPDWLQVMSDSEVEISS--ELQWSCAAAGKPRPT 358

Query: 620 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
             W ++G+ + +  R ++  NG L I+ ++ +DSG+Y C A N H    S   L V    
Sbjct: 359 IRWLRNGHALITQDRVEV-NNGRLKIANLALEDSGMYQCVAENKHSTIYSNAELRVQVQA 417

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 739
             +   P +  + A R  Q++              W+  G  +         TP+     
Sbjct: 418 PDFRLNPVRKLVPAARGGQVKMECKPRAAPKPTLFWSR-GTELLTNSTRITVTPD----- 471

Query: 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           G+L I N S AD G+Y C  ++ +GK ++   + V G
Sbjct: 472 GILWIYNISRADEGKYTCFAENYLGKANSTGHLSVRG 508



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 132/327 (40%), Gaps = 44/327 (13%)

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           +  +T +C+A   P   Y W  NG       +   ++  Y      L I      RD   
Sbjct: 51  EGKVTLSCQARSSPAAVYRWRVNGT-----DISFAEESHYTQVAGNLVINNPQNGRDGGS 105

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSF-KKRPLESET--YAGEGGNVTIFCNPEAA-PKP 618
           YQC A N+  T  S    RV  LK  +    P ES +     EG    + C P A  P  
Sbjct: 106 YQCLAINRCGTIVS----RVANLKFGYLHDFPPESRSPQTVHEGMGTFLACQPPAHYPAL 161

Query: 619 KFVW--KKDGNIIG-SGGRRKIFE-NGNLLISPVSRDDSGIYSC-TATNVHGMDES---K 670
            + W   +  N I    GR  + +  GNL ++    +D+G Y C T  N+    +S   K
Sbjct: 162 SYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGNYFCFTTINMDVSTKSIFSK 221

Query: 671 GRLIVLH--------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
              + +H         P+   + P +    + +  QL C A+   +  + +         
Sbjct: 222 AVQLTVHPDASPRKTAPNIRVRFPAETYALSGQTAQLECFAYGNPIPKIRW--------- 272

Query: 723 GNMDLNELETPNI--NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
               ++ +  P +  ++DG +L I   +F D G YEC V ++ G+ + +  V V+  P  
Sbjct: 273 --RKVDGILPPKVGASVDGPILIIPELNFDDEGMYECEVYNSEGRETHQGRVSVQAQPDW 330

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRP 807
              +   EV + S+ +QW+  A  G+P
Sbjct: 331 LQVMSDSEV-EISSELQWSCAAA-GKP 355


>gi|156546343|ref|XP_001606583.1| PREDICTED: neuroglian-like isoform 1 [Nasonia vitripennis]
          Length = 1254

 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 224/809 (27%), Positives = 366/809 (45%), Gaps = 55/809 (6%)

Query: 181 ENPDKIPRGPYFIKQPTD-VVFDLSKRSILND---ITLSCYAGGYPNPSYEWFKEDYVQD 236
           ++P +I + P     PTD ++F +++ S+  +     + C A G P P YEW K    +D
Sbjct: 20  QSPPRISKQP-----PTDELLFQVAQVSVNENEKPFLVECEAEGEPAPLYEWIKNG--KD 72

Query: 237 RLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 296
                  D +S +      G L+I+ PR  ED G Y C A N++G   S SV +    + 
Sbjct: 73  FKWQAYDDRISQQP---GRGTLVISKPRD-EDLGQYQCFAKNEWGIATSNSVFVRKAELN 128

Query: 297 EFNLKRAPEIGNQNWGK--AMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGA 352
            F   + P   + + G    + C PP  +P  N YW        ++   + R+ +  +G 
Sbjct: 129 SFK-DQNPVTLSVSEGDPYKLTCQPPDGWPKPNVYWLIQDHAGTIKSINNSRMTLDPEGN 187

Query: 353 LYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPH---SNFQQLKFPNNFPKT 406
           L+FS + ++DA +   Y+C   S   +  + G    L V      ++  + +    +   
Sbjct: 188 LWFSNVTKLDASDDYYYACAATSLFRNEYKLGNRVLLNVISTGSTASSNKREPVKQYVSR 247

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFE-NFNRILTIPNVKVEDQG 464
             E    G K+ L C+  G P+P   W++ G  + P +   E N+ + L I +V  +D+G
Sbjct: 248 KNEVALRGKKIELFCIFGGTPLPLTVWSKNGQRIRPNDRVTEGNYGKSLIIKHVNFDDEG 307

Query: 465 EYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWF 523
            Y C  SN   + +S S+ + + + P FT+     +      + + CEA GVP     W 
Sbjct: 308 TYTCDVSNGVGSAQSYSINLEVLSVPYFTVEPEIVNAAEDETVEFKCEATGVPKPEIKWI 367

Query: 524 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
            NG+ ++          R  +  N + I  L  + D   Y C A N L   Y    + VL
Sbjct: 368 HNGKPISEAPF----NPRRKVTPNSIIIEKL-LKNDTGNYGCNATNSLGYVYKDVYVNVL 422

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 643
            L+P   + P++  T   +G  + + C    APKP+  W ++G  + +GGR KI E+G+L
Sbjct: 423 ALEPEILQPPMDESTV--DGKTIRLTCRVFGAPKPEVKWVRNGQEL-TGGRYKILESGDL 479

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            I  V   D+G Y+C A+N  G   + G L V    +    +P    +AA      RC+A
Sbjct: 480 EIENVIFSDAGEYNCHASNKFGKVNATGFLAVKEH-TRITDVPEDYEVAAGATATFRCNA 538

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            T+  L++   W   G  I   D  E E   I      L IT  +  D+G Y CV ++ +
Sbjct: 539 VTDSTLELHIDWLSKGEPI---DF-EAEPRFIRSTDYSLMITKTTELDSGTYTCVARTDL 594

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-ST 822
            +   + T+IV+  P  P  +  V      A + WT    N  PI  Y I   T++   T
Sbjct: 595 DEARAQATLIVQDVPNSPT-LLGVSCTSNQAFVSWTPMGDNRSPILRYAIQYNTSFTPDT 653

Query: 823 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
           W    +HV   E  RY  +        + PW+ Y F+VIA N++G  +PS  S    T  
Sbjct: 654 WEYAKDHVPATE-QRYAVQ--------MSPWANYTFRVIAYNKIGPSQPSQHSHVCTTLP 704

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 942
           D PY  P  + G G    +L ISW  +P+ + NAP   Y++++++  D   +   ++E  
Sbjct: 705 DVPYNNPDNVMGRGDDPQNLVISWTVMPQIEHNAPKFKYQVYYKR--DIPGEDWRIEEIT 762

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           N     + I ++  Y +Y++KV A+N+ G
Sbjct: 763 NWKQNTLVINNQPTYQKYKIKVGALNEKG 791


>gi|403309233|ref|XP_003945023.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1209

 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 226/850 (26%), Positives = 368/850 (43%), Gaps = 74/850 (8%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           ME LL      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   METLLPRRGVIISLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+D    +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDDNPFYFTDPRIITS----------NSSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  +    +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGP 382
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T     
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRG 437
              L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + G
Sbjct: 219 PMKLTVNSSNSIKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIG 278

Query: 438 SPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             LP+     EN+ + L I NV  +D+G Y C A+N          + ++  P +T    
Sbjct: 279 GDLPKGRETKENYGKTLKIENVSYQDKGNYRCTATNFLGTATHDFHVIVEEPPRWTKKPQ 338

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
                  ++    CEA G P  T  W  NG  +++        D  F ++  ++   L P
Sbjct: 339 SAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQP 393

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAA 615
                +YQC A N   T  ++A + ++ ++P  +    + E YA   G +  + C   A+
Sbjct: 394 NHT-GVYQCEASNVHGTILANANINIVDVRPLIQTE--DEENYATVVGYSAFLHCKFFAS 450

Query: 616 PKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+    W+K        GRR  I+ENG L I+  + +D+G YSC   N  G       L 
Sbjct: 451 PEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENSIGKTAVTANLD 510

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQL----RCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 730
           + +  +     P    I     L+L    +C AH +  L ++  W+ +G      ++N  
Sbjct: 511 IRNA-TKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLS--WSKDGEA---FEINGT 564

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 790
           E   I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E  
Sbjct: 565 EDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSERQ 624

Query: 791 KTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIEN 848
             S  + W  G  +   I+ Y +          F  ++  +G+  E+ R  G+K   I  
Sbjct: 625 NRSVRLTWEAGDDHNSNISEYIV---------EFEGNKEELGRWEELTRVQGKKTTVILP 675

Query: 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
            L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEP
Sbjct: 676 -LAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 734

Query: 909 LPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
           L   +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAI
Sbjct: 735 LKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAI 788

Query: 968 NDVGPGPESE 977
           N +G GP+ +
Sbjct: 789 NQLGSGPDPQ 798



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 140/595 (23%), Positives = 231/595 (38%), Gaps = 75/595 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++    G Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTGVYQCEASNVHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I+I  +    I   D+  +N A +        C+ F  P+   SW +       
Sbjct: 410 ILANANINI-VDVRPLIQTEDE--ENYATVVGYSAFLHCKFFASPEAIVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 462 EAKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENSIGKTAVTANLDIRNATKLRVS 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 521 P---KNPRIPKLHMLEL-HCESKCDAHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 576

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS ++ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 577 TISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 634

Query: 704 ---HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
              H   + +    +  N   +G  +    E   +      + +  A F    ++  +  
Sbjct: 635 GDDHNSNISEYIVEFEGNKEELGRWE----ELTRVQGKKTTVILPLAPFVRY-QFRVIAM 689

Query: 761 STVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKI 813
           + VG+   ++ +   E PP  P      ++V         I+W          P   Y++
Sbjct: 690 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749

Query: 814 IARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYG 869
                   TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G
Sbjct: 750 --------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG 794

Query: 870 EPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
               P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W 
Sbjct: 795 ----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWW 850

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 851 KTKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|195173863|ref|XP_002027704.1| GL22653 [Drosophila persimilis]
 gi|194114650|gb|EDW36693.1| GL22653 [Drosophila persimilis]
          Length = 1309

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 216/803 (26%), Positives = 353/803 (43%), Gaps = 55/803 (6%)

Query: 190 PYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  IKQP   +++F +++++  +D    + C A G P P Y W K     D    +    
Sbjct: 28  PRIIKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYD---- 83

Query: 246 LSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
             D+     G G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + A 
Sbjct: 84  --DRMLRQPGRGTLVITSPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAK 140

Query: 305 EIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSALEQ 360
            +        M  C  P  +P     W  +      ++   + R+ +  +G L+FS + +
Sbjct: 141 TVVAVEGEPFMLKCAAPDGFPSPTVNWMMQQSIDGSIKSINNSRMTLDPEGNLWFSNVTR 200

Query: 361 IDAGN---YSCNVQSKVSDTGR--NGPFFPLKVFPHSNFQQLKFP-NNFPKTFPEAPKAG 414
            DA +   Y+C+  S      +  N     +K    S  Q    P   +          G
Sbjct: 201 DDASDDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHQPIRQYVSRRQSLALRG 260

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASN 472
            ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  SN
Sbjct: 261 KRMELFCIYGGTPLPQTVWSKDGHRIQWSDRITQGHYGKSLIIRQTNFDDNGTYTCDVSN 320

Query: 473 DRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
                +S S+ + + A P FT+    +      ++ + CEA G P+   SW  NG+ +  
Sbjct: 321 GVGNAQSFSIILEVNAIPYFTVEPDSRRPPEDEEVVFQCEAAGFPEPKISWIHNGKPIEQ 380

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
            T       R  + DN  TIR +N  + D   Y C A N L   Y    L V  L P  +
Sbjct: 381 ST----PNPRRTVTDN--TIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIE 434

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
           + P    T   +G NVT+ C    APKP+  W +  N + +GGR  +  NG+L I  V+ 
Sbjct: 435 EPPTALSTV--DGRNVTLRCRVTGAPKPQVRWLRATNWL-TGGRYIVQANGDLQILDVTF 491

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D+G Y+C A N  G   ++G L V+   +   Q P    +AA ++   RC+   +  L+
Sbjct: 492 SDAGQYTCYAENKFGNKSAEGSLTVMEH-TRITQEPQNYEVAAGQSATFRCNEAHDGNLE 550

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           +   W  +G  I   D  E +   +  +   L I      D+G+Y CV  + + + + K 
Sbjct: 551 IEIDWWKDGQPI---DF-EAQPRFVKTNDNSLTIAKTMELDSGKYSCVACTRLDQATAKA 606

Query: 771 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEH 829
            +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    E 
Sbjct: 607 NLIVQDVPNAPK-LTGITCQADKAEIMWEPQGDNRSPILHYTIQFNTSFTPASWDTAFEK 665

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
           V   +          S    + PW+ Y F+VIA N++G  +PS+ S    T  D P++ P
Sbjct: 666 VPNTDF---------SFVVQMSPWANYTFRVIAFNKIGASQPSAHSESCTTQPDVPFKNP 716

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 948
             + G G +  +L ISW P+P  + NAP   Y++ W++      ++++ + E+    I +
Sbjct: 717 DNVVGQGTEPNNLVISWTPMPEIEHNAPKFQYRVSWKRDIPAAAWENKDINEWHQNNIVI 776

Query: 949 VRIPSEFYYTEYEVKVQAINDVG 971
              P+   + +Y +KV AIN+ G
Sbjct: 777 TDQPT---FVKYHIKVVAINERG 796


>gi|327266144|ref|XP_003217866.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Anolis carolinensis]
          Length = 1214

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 225/842 (26%), Positives = 352/842 (41%), Gaps = 103/842 (12%)

Query: 180 IENPDKIPRGPYFIKQPTDVV---FDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQD 236
           IE P  + + P    Q TD V   FD        + T+ C A G P P + W K+     
Sbjct: 23  IEIPLSVRQLPTITAQSTDEVAFPFD-------EEFTIKCEAKGNPRPIFNWTKD----- 70

Query: 237 RLVANLIDPLSDKRFTLSG--GNLIINDPRQVED-RGSYHCKASNKFGSIISESVQLAFG 293
                  D   D R   S   G  ++ +   +   +G Y C ASN+ GS +SE + +   
Sbjct: 71  ---GKPFDLQHDSRIIASSNSGTFVVKNRGNISSFQGKYRCYASNELGSAMSEEIAVVVP 127

Query: 294 FIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
            I +F  ++   I  ++ G AM   C+PP   P +  YW        + +D+RV +S  G
Sbjct: 128 GIPKFPKEKIGPIDVEH-GDAMVLRCNPPKGIPPLRIYWMNIAL-QHIPQDERVSMSLKG 185

Query: 352 ALYFSALEQIDA-GNYSC--------------------------NVQSKVSDTGRNGPFF 384
            L+F+ +++ D+  +Y C                          N  S  SD   N   F
Sbjct: 186 DLFFANVDENDSRSDYCCFASFPRLRTIVQKMPMTLTVTRSKYTNDSSSSSDPKAN--LF 243

Query: 385 ----PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
               P  V P S+ +Q K               G  + LEC+A G P P  NW R     
Sbjct: 244 KERKPKLVIPESSDRQSKV----------TIMKGTDLLLECIAEGLPTPHLNWARVDGVT 293

Query: 441 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
                 EN+ ++L I  V  ED G Y C A N          + ++  P + I       
Sbjct: 294 VHRGSIENYGKLLKIEQVTAEDAGIYECIARNALGETRHEFHVGVEEPPMWVIKPESGVF 353

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
                    CEA G P+ T  W RNG  L   T     +  +  ++  +T   LN   D 
Sbjct: 354 SVGGSFVRLCEAVGDPEPTIKWKRNGVPL---TETKTSRAVFSTREISITDLVLN---DS 407

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 620
           A+YQC A N+  T  ++A + VL + P     P   E     G    ++C+  A P P  
Sbjct: 408 AVYQCEATNKHGTILATANIDVLEIPPEILT-PDGEEYVVVVGYPSRLYCHFFAVPLPDV 466

Query: 621 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
            W KD ++     R     NG L I    ++D+G Y+C   N+ G       L V    +
Sbjct: 467 SWTKDDSM----KRLDADLNGTLEIRETRKEDAGFYTCVVKNIAGRRALTATLTVRDA-T 521

Query: 681 YYEQLPPKITIAAHRNLQLRC-SAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINID 738
               +P    +     + LRC S +   L D   I W  +G  IG  D +E     I ++
Sbjct: 522 KISVVPKNPQVLKDHPVLLRCHSEYDPHLKDHFQISWRKDGEEIGKNDTDE---ERIIME 578

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
           G  L I N    D G Y C+  +++   +  + + V   P  P  + + E    S  + W
Sbjct: 579 GDTLFIQNVELEDQGVYTCIGSTSLDTTADDSRITVIDVPDSPQDLYISEKRNRSVRLSW 638

Query: 799 TDGATNGRPITHYKIIARTN-WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
             G +N  PI  + +    N W    W         +E+ R  G    ++   LVP+  Y
Sbjct: 639 NAGNSNNSPINEFIVEFEENRWEPRKW---------RELIRVPGNDTTAVLP-LVPYVNY 688

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VI+ N +G  +PS  S +Y TP   P + P  I     K  +++++WEPL   + N 
Sbjct: 689 QFRVISVNAVGRSQPSETSERYETPPAAPDKNPENIRVETSKPHEMNMTWEPLKPMEHNG 748

Query: 917 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
           P + YK+ WR+++  E++ ET++++    + +   P+   +  Y++KVQA+N++G GPE 
Sbjct: 749 PGLEYKVNWRQQDVAEWEEETVQKH---FLVLQNTPT---FVPYDIKVQAMNNLGSGPEP 802

Query: 977 EV 978
           +V
Sbjct: 803 DV 804


>gi|195480086|ref|XP_002101132.1| GE15791 [Drosophila yakuba]
 gi|194188656|gb|EDX02240.1| GE15791 [Drosophila yakuba]
          Length = 1239

 Score =  253 bits (646), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 219/806 (27%), Positives = 353/806 (43%), Gaps = 57/806 (7%)

Query: 188 RGPYFIKQPT--DVVFDLSK--RSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           R P   KQP   +++F +++  + I N   + C A G P P Y W K     D       
Sbjct: 27  RPPRITKQPAPGELLFKVAQQNKEIDNPFIIECEADGQPEPEYSWIKNGKKFD------W 80

Query: 244 DPLSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
               ++     G G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F    
Sbjct: 81  QAYDNRMLRQPGRGTLVITIPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFK-DE 138

Query: 303 APEIGNQNWGKAMF--CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSA 357
            P+      G+     C  P  +P     W  +D F   ++   + R+ +  +G L+FS 
Sbjct: 139 PPKSQEAVEGEPFMLKCAAPDGFPSPTVNWMIQDSFDGNIKSINNSRMTLDPEGNLWFSN 198

Query: 358 LEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAP 411
           + + DA +   Y+C+  S      + G    L V     +  Q K P    +        
Sbjct: 199 VTREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLA 258

Query: 412 KAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICR 469
             G ++ L C+  G P+P   W+R G  +  +      ++ + L I     +D G Y C 
Sbjct: 259 LRGKRMELFCIYGGTPLPQTVWSRDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCD 318

Query: 470 ASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            SN     +S S+ +++ + P FT            ++ + C A GVP+   SW  NG+ 
Sbjct: 319 VSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKP 378

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
           +   T       R  + DN  TIR +N  + D   Y C A N L   Y    L V    P
Sbjct: 379 IEQST----PNPRRTVTDN--TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPP 432

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP 647
           +  + P    T   +G NVTI C    +PKP   W +  N + +GGR  +  NG+L I  
Sbjct: 433 TISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRSSNWL-TGGRYNVQANGDLEIQD 489

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
           V+  D+G Y+C A N  G  ++ G L+V    +   Q P    +AA ++   RC+   ++
Sbjct: 490 VTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDD 548

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
            L++   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + +
Sbjct: 549 TLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLTIAKTIELDSGEYTCVARTRLDEAT 604

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNV 826
            +  +IV+  P  P  +  +      A I W     N  PI HY I   T++  S+W   
Sbjct: 605 ARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPSSWDAA 663

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            E V            ++S    + PW+ Y F+VIA N++G   PS+ S    T  D P+
Sbjct: 664 YEKV---------PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPF 714

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVG 945
           + P  + G G +  +L ISW P+P  + NAPN +Y + W++      +++  + ++    
Sbjct: 715 KNPDNVVGQGNEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNN 774

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVG 971
           I +   P+   + +Y +KV AIN+ G
Sbjct: 775 IVIADQPT---FVKYLIKVVAINERG 797


>gi|148666973|gb|EDK99389.1| cell adhesion molecule with homology to L1CAM, isoform CRA_b [Mus
           musculus]
 gi|148666974|gb|EDK99390.1| cell adhesion molecule with homology to L1CAM, isoform CRA_b [Mus
           musculus]
          Length = 1210

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 214/782 (27%), Positives = 331/782 (42%), Gaps = 56/782 (7%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRG 270
           + C A G P P + W K+D   D         LSD R      SG   I N+      +G
Sbjct: 56  IECEAKGNPEPIFSWTKDDKPFD---------LSDPRIIAANNSGTFKIPNEGHISHFQG 106

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYY 329
            Y C ASN+ G+ +SE ++     + +F  ++   I  +     +  C+PP   P ++ Y
Sbjct: 107 KYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCNPPKGLPPLHIY 166

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPFFPLK 387
           W        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  K+    +  P   L 
Sbjct: 167 WMNIEL-EHIEQDERVYMSQRGDLYFANVEENDSRNDYCCFAAFPKLRTIVQKMPM-KLT 224

Query: 388 VFPHSNFQQLKF-----PNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
           V   ++ +Q K      P        +    GD + LEC A G P P   W++ GS LP 
Sbjct: 225 VNSSNSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHIQWSKPGSELPE 284

Query: 443 N-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
             A  E   + L I N+  +D+G Y C A+N          ++++  P +          
Sbjct: 285 GRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVEEPPRWKKKPQSAVYS 344

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             +     CEA G P  T  W  NG  +     P +     F+    ++   L P     
Sbjct: 345 TGSSGILLCEAEGEPQPTIKWRLNGLPIEKHPFPGD-----FMFPREISFTNLLPNHT-G 398

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKF 620
           +YQC A N   T  ++A + V+ + P  K +    E YA   G +  + C   A+PK   
Sbjct: 399 VYQCEASNIHGTILANANIDVIDVIPLIKTK--NEENYATVVGYSAFLHCEYFASPKATV 456

Query: 621 VWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
           VW+  D      G R    ENG L I   + +D+G YSC   N  G       L + +  
Sbjct: 457 VWEVADETHPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNA- 515

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINI 737
           +     P    I     L+L C +  +  L   +   W+ +G      ++N  E   I I
Sbjct: 516 TKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEA---FEMNGTEDGRIVI 572

Query: 738 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797
           DG  L I+N +  D G Y C  ++++   S KT V V G P  PG + + E    S  + 
Sbjct: 573 DGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPDPPGNLHLSERQNRSVRLS 632

Query: 798 WTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
           W  G  +   I+ Y +    N      W         +E+ R  G +E  +   L P+  
Sbjct: 633 WEAGDDHNSKISEYIVEFEGNREEPGKW---------EELTRVQG-EETDVVLSLAPYVR 682

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           Y+F+V A NE+G    S PS  + TP   P + P  I     +  ++ I WEPL   +QN
Sbjct: 683 YQFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQN 742

Query: 916 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
            P + YK+ W+ +   E   E +     V    +R+ +   Y  Y+VKVQAIN +G  P+
Sbjct: 743 GPGLEYKVSWKPQGAPEEWEEEI-----VTNHTLRVMTPTVYAPYDVKVQAINQLGSSPD 797

Query: 976 SE 977
            +
Sbjct: 798 PQ 799



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 143/596 (23%), Positives = 220/596 (36%), Gaps = 77/596 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFN--RILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   G P+ ++ +  +F   R ++  N+     G Y C ASN    
Sbjct: 351 LLCEAEGEPQPTIKWRLNGLPIEKHPFPGDFMFPREISFTNLLPNHTGVYQCEASNIHGT 410

Query: 477 LESSVTISIQAEPNFTIPLTD-KHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLN 530
           + ++  I +       IPL   K+ +N A +        CE F  P  T  W      + 
Sbjct: 411 ILANANIDVID----VIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVW-----EVA 461

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTL 585
            ET PLE  DRY   +N     Y   E D   Y C   N +     +A L +     L +
Sbjct: 462 DETHPLEG-DRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNATKLRV 520

Query: 586 KPSFKKRPLES--ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII---GSGGRRKIFEN 640
            P   + P     E Y          C+       K  W KDG      G+   R + + 
Sbjct: 521 SPKNPRIPKSHVLELYCESQ------CDSHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDG 574

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
             L IS ++ +D G+YSC+A         K ++ VL  P      P  + ++  +N  +R
Sbjct: 575 AYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPD----PPGNLHLSERQNRSVR 630

Query: 701 CS-----AHTEELLDVAYIWTHNGVRIGNMD-LNELETPNINIDGGLLEITNASFADAGE 754
            S      H  ++ +    +  N    G  + L  ++    ++   L       F     
Sbjct: 631 LSWEAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQGEETDVVLSLAPYVRYQFRVTAV 690

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT--DGATNGRPITHYK 812
            E V +S     S         P   P  ++V         I+W          P   YK
Sbjct: 691 NE-VGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYK 749

Query: 813 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGE 870
           +    +W        E    + V  +T R       V+ P  ++ Y+ KV A N+LG   
Sbjct: 750 V----SWKPQ--GAPEEWEEEIVTNHTLR-------VMTPTVYAPYDVKVQAINQLG--- 793

Query: 871 PSSPSPQYNT---PADKPYQAP--SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
            SSP PQ  T     D P  AP   R+      +  + ++W  +P+E  +     Y+I W
Sbjct: 794 -SSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTL--VKVTWSSIPKETVHGLLRGYQINW 850

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
            K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 851 WKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESE 906


>gi|1842427|gb|AAB47753.1| ankyrin binding cell adhesion molecule neurofascin, partial [Rattus
           norvegicus]
          Length = 1166

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 226/845 (26%), Positives = 360/845 (42%), Gaps = 101/845 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 4   PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 59

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 60  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNPIRLQVSKSPLWPKENL 117

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 118 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSTSM-EPITQDKRVSQGHNGDLYFSNVML 174

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNFPK----------T 406
           Q    +YSCN +   + T +    F LKV    P+++      P+ +             
Sbjct: 175 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSFM 234

Query: 407 FPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
           +P+   +      G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV 
Sbjct: 235 YPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS 294

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T
Sbjct: 295 EEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPT 354

Query: 520 YSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
             W  NG+ L S       +   D    +D  ++ R        A+YQC   N+     +
Sbjct: 355 VQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 406

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 633
           +A + VL + P     P              + C    +P P   W K+G   GS   GG
Sbjct: 407 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGG 463

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
              +++NG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P       
Sbjct: 464 NYHVYQNGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKR 522

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFAD 751
              +QL C    +  L +   W  +   + IGN    E ++         L I   +  D
Sbjct: 523 GTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERD 573

Query: 752 AGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATI 796
            G Y C+  + + +   K  + V               +G P  P  +++ ++ + S  +
Sbjct: 574 QGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRL 633

Query: 797 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
            W  G  N  PIT Y +     +    F      +  +  ++ G   +++ + L P+  Y
Sbjct: 634 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VLHDHSKFPGSVNSAVLH-LSPYVNY 685

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G   PS PS +Y T    P   PS + G G +  ++ I+W P+       
Sbjct: 686 DFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 745

Query: 917 PNI-YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 973
           PN+ YY + WR++       ET + + NV +   R  +     Y  YE++VQA ND G G
Sbjct: 746 PNLRYYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKG 798

Query: 974 PESEV 978
           PE E 
Sbjct: 799 PEPET 803


>gi|110347545|ref|NP_031723.2| neural cell adhesion molecule L1-like protein precursor [Mus
           musculus]
 gi|408360031|sp|P70232.2|CHL1_MOUSE RecName: Full=Neural cell adhesion molecule L1-like protein;
           AltName: Full=Cell adhesion molecule with homology to
           L1CAM; AltName: Full=Chl1-like protein; AltName:
           Full=Close homolog of L1; Contains: RecName:
           Full=Processed neural cell adhesion molecule L1-like
           protein; Flags: Precursor
 gi|124297745|gb|AAI31672.1| Cell adhesion molecule with homology to L1CAM [Mus musculus]
 gi|124297981|gb|AAI31671.1| Cell adhesion molecule with homology to L1CAM [Mus musculus]
 gi|148666972|gb|EDK99388.1| cell adhesion molecule with homology to L1CAM, isoform CRA_a [Mus
           musculus]
          Length = 1209

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 214/782 (27%), Positives = 331/782 (42%), Gaps = 56/782 (7%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRG 270
           + C A G P P + W K+D   D         LSD R      SG   I N+      +G
Sbjct: 55  IECEAKGNPEPIFSWTKDDKPFD---------LSDPRIIAANNSGTFKIPNEGHISHFQG 105

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYY 329
            Y C ASN+ G+ +SE ++     + +F  ++   I  +     +  C+PP   P ++ Y
Sbjct: 106 KYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCNPPKGLPPLHIY 165

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPFFPLK 387
           W        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  K+    +  P   L 
Sbjct: 166 WMNIEL-EHIEQDERVYMSQRGDLYFANVEENDSRNDYCCFAAFPKLRTIVQKMPM-KLT 223

Query: 388 VFPHSNFQQLKF-----PNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
           V   ++ +Q K      P        +    GD + LEC A G P P   W++ GS LP 
Sbjct: 224 VNSSNSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHIQWSKPGSELPE 283

Query: 443 N-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
             A  E   + L I N+  +D+G Y C A+N          ++++  P +          
Sbjct: 284 GRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVEEPPRWKKKPQSAVYS 343

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             +     CEA G P  T  W  NG  +     P +     F+    ++   L P     
Sbjct: 344 TGSSGILLCEAEGEPQPTIKWRLNGLPIEKHPFPGD-----FMFPREISFTNLLPNHT-G 397

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKF 620
           +YQC A N   T  ++A + V+ + P  K +    E YA   G +  + C   A+PK   
Sbjct: 398 VYQCEASNIHGTILANANIDVIDVIPLIKTK--NEENYATVVGYSAFLHCEYFASPKATV 455

Query: 621 VWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
           VW+  D      G R    ENG L I   + +D+G YSC   N  G       L + +  
Sbjct: 456 VWEVADETHPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNA- 514

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINI 737
           +     P    I     L+L C +  +  L   +   W+ +G      ++N  E   I I
Sbjct: 515 TKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEA---FEMNGTEDGRIVI 571

Query: 738 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797
           DG  L I+N +  D G Y C  ++++   S KT V V G P  PG + + E    S  + 
Sbjct: 572 DGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPDPPGNLHLSERQNRSVRLS 631

Query: 798 WTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
           W  G  +   I+ Y +    N      W         +E+ R  G +E  +   L P+  
Sbjct: 632 WEAGDDHNSKISEYIVEFEGNREEPGKW---------EELTRVQG-EETDVVLSLAPYVR 681

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           Y+F+V A NE+G    S PS  + TP   P + P  I     +  ++ I WEPL   +QN
Sbjct: 682 YQFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQN 741

Query: 916 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
            P + YK+ W+ +   E   E +     V    +R+ +   Y  Y+VKVQAIN +G  P+
Sbjct: 742 GPGLEYKVSWKPQGAPEEWEEEI-----VTNHTLRVMTPTVYAPYDVKVQAINQLGSSPD 796

Query: 976 SE 977
            +
Sbjct: 797 PQ 798



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 149/602 (24%), Positives = 228/602 (37%), Gaps = 89/602 (14%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFN--RILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   G P+ ++ +  +F   R ++  N+     G Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRLNGLPIEKHPFPGDFMFPREISFTNLLPNHTGVYQCEASNIHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTD-KHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLN 530
           + ++  I +       IPL   K+ +N A +        CE F  P  T  W      + 
Sbjct: 410 ILANANIDVID----VIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVW-----EVA 460

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTL 585
            ET PLE  DRY   +N     Y   E D   Y C   N +     +A L +     L +
Sbjct: 461 DETHPLEG-DRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNATKLRV 519

Query: 586 KPSFKKRPLES--ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII---GSGGRRKIFEN 640
            P   + P     E Y          C+       K  W KDG      G+   R + + 
Sbjct: 520 SPKNPRIPKSHVLELYCESQ------CDSHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDG 573

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
             L IS ++ +D G+YSC+A         K ++ VL  P      P  + ++  +N  +R
Sbjct: 574 AYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPD----PPGNLHLSERQNRSVR 629

Query: 701 CS-----AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
            S      H  ++ +  YI    G R       EL      + G   ++   S A    Y
Sbjct: 630 LSWEAGDDHNSKISE--YIVEFEGNREEPGKWEEL----TRVQGEETDVV-LSLAPYVRY 682

Query: 756 ECVVKST--VGKI-STKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGR 806
           +  V +   VG+  ++  +   E PP  P      ++V         I+W          
Sbjct: 683 QFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNG 742

Query: 807 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP--WSTYEFKVIAGN 864
           P   YK+    +W        E    + V  +T R       V+ P  ++ Y+ KV A N
Sbjct: 743 PGLEYKV----SWKPQ--GAPEEWEEEIVTNHTLR-------VMTPTVYAPYDVKVQAIN 789

Query: 865 ELGYGEPSSPSPQYNT---PADKPYQAP--SRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           +LG    SSP PQ  T     D P  AP   R+      +  + ++W  +P+E  +    
Sbjct: 790 QLG----SSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTL--VKVTWSSIPKETVHGLLR 843

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPE 975
            Y+I W K           KE   +  +  R    +PS   ++E+ + V A N  G GPE
Sbjct: 844 GYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPE 903

Query: 976 SE 977
           SE
Sbjct: 904 SE 905


>gi|195448218|ref|XP_002071561.1| GK25863 [Drosophila willistoni]
 gi|194167646|gb|EDW82547.1| GK25863 [Drosophila willistoni]
          Length = 1304

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 214/802 (26%), Positives = 357/802 (44%), Gaps = 53/802 (6%)

Query: 190 PYFIKQP--TDVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  IKQP   +++F +++++  +D    + C A G P P Y W K     D         
Sbjct: 28  PRIIKQPPTDELLFKVAQQNKESDKPFIIECEADGQPEPEYSWIKNGKKFDWQA------ 81

Query: 246 LSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
             ++     G G L+I  P+  ED G Y C ASN+FG   S SV +    +  F  + A 
Sbjct: 82  YDNRMLRQPGRGTLVITSPKD-EDLGQYQCFASNEFGIATSNSVFVRKAELNAFKDEAAK 140

Query: 305 EI-GNQNWGKAMFCDPPTNYPGVNYYW-ARDYFPNFVEE--DKRVFVSYDGALYFSALEQ 360
            +   +    ++ C+ P  +P     W  +      ++   + R+ +  +G L+FS L +
Sbjct: 141 TVEAVEGEPFSLQCEAPDGWPKPTVNWLIQQSIDGGIKSINNSRMTLDPEGTLWFSNLTR 200

Query: 361 IDAGN---YSCNVQSKVSDTGR--NGPFFPLKVFPHSNFQQLKFPN-NFPKTFPEAPKAG 414
            DA +   Y+C+  S   +  +  N     +K    S  Q    P   +     E    G
Sbjct: 201 DDASDDFYYACSATSVFRNEYKIGNKVLLDVKQMGVSASQNKHQPKRQYVTRKNEVALRG 260

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASN 472
            +V L C+  G P+P   W++ G P+  +      ++ + L I     +D+G Y C  SN
Sbjct: 261 KRVELYCIFGGTPLPQTVWSKDGHPIQWSDRITQGHYGKSLVIRQANRDDEGAYTCDVSN 320

Query: 473 DRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
                +S S+ + I A P FT     ++     ++ + C+A G P+ T  W  NG+ + +
Sbjct: 321 GVGNAQSYSINLKINAIPYFTEEPDFQNAAEDEEVVFNCKAAGFPEPTIQWIHNGKPI-A 379

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
           ++ P     R  + +N + I  L  + D   Y C A N L   Y    L VL L P  ++
Sbjct: 380 QSPP---NPRRTVTNNFIKIVQLT-KADTGNYGCNATNSLGYVYKDVYLNVLALPPEIQE 435

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 651
            P +  T   +G N+T+ C    APKP+  W   G    +GGR  +  NG+L I  V+  
Sbjct: 436 APRDESTV--DGRNITMRCRVFGAPKPQVKWLH-GRKWLTGGRYNVLPNGDLSIDAVTFP 492

Query: 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
           D+G Y+C A N  G   ++G L V    +   Q P    +AA ++   RC+   ++ L++
Sbjct: 493 DAGKYTCFAINKFGNKTAEGSLEVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEL 551

Query: 712 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
              W  +G  I   D  + E   +  +   L I      D+GEY CV ++ + + + K  
Sbjct: 552 EIEWWKDGQAI---DF-DAEARFVKTNDNSLTIAKTMELDSGEYTCVARTKLDEATAKAN 607

Query: 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHV 830
           +IV+  P  P  +  +      A I+W     N  PI HY I   T++  ++W    E V
Sbjct: 608 LIVQDVPNAPR-LLGISCQADKAEIRWEPQGDNRSPILHYTIQFNTSFTPASWDTAYEKV 666

Query: 831 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
              +          S    + PW+ Y F+VIA N++G   PS  S    T    P++ P 
Sbjct: 667 PSTDF---------SFVVQMSPWANYTFRVIAFNKIGPSPPSGHSEACTTQPAVPFKNPD 717

Query: 891 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVV 949
            + G G +  +L ISW P+P  + N P  +Y+++W++      +QS+ + ++    I + 
Sbjct: 718 NVVGQGTEPTNLVISWTPMPEIEHNGPKFHYRVYWKRDIAAAPWQSKEIDDWHQNNIVIT 777

Query: 950 RIPSEFYYTEYEVKVQAINDVG 971
             P+   + +Y +KV AIN  G
Sbjct: 778 DQPT---FVKYHIKVAAINGNG 796


>gi|402859569|ref|XP_003894225.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Papio anubis]
          Length = 1209

 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 225/845 (26%), Positives = 362/845 (42%), Gaps = 70/845 (8%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEP L      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPRLNGRRLIISLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDGNPFYFTDHRIITS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGP 382
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T     
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRG 437
              L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + G
Sbjct: 219 PMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIG 278

Query: 438 SPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             LP+     EN+ + L I NV  +D+G Y C ASN          + ++  P +T    
Sbjct: 279 GDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQ 338

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
                  ++    CEA G P  T  W  NG  +++        D  F ++  ++   L P
Sbjct: 339 SAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQP 393

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAA 615
               A+YQC A N   T  +SA + V+ ++P  + +  + E YA   G +  + C   A+
Sbjct: 394 NHT-AVYQCEASNVHGTILASANVDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFAS 450

Query: 616 PKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+    W+K        GRR  +++NG L I+  + +D+G YSC   N  G       L 
Sbjct: 451 PEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLD 510

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELET 732
           + +  +     P    I     L+L C +  +  L   +   W+ +G      ++N  E 
Sbjct: 511 IRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEA---FEINGTED 566

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 792
             I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E    
Sbjct: 567 GRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENLHLSERQNR 626

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           S  + W  G  +   I+ Y +    N      W         +E+ R  G+K   I   L
Sbjct: 627 SVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EELTRVQGKKTTVILP-L 676

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL 
Sbjct: 677 APFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLK 736

Query: 911 REKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
             +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAIN 
Sbjct: 737 SMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQ 790

Query: 970 VGPGP 974
           +G GP
Sbjct: 791 LGSGP 795



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 228/597 (38%), Gaps = 79/597 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + +S  + +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 410 ILASANVDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA--------QLRVL 583
           E  PLE + RY + DN         E D   Y C  +N +     +A        QLRV 
Sbjct: 462 EAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRVS 520

Query: 584 TLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFE 639
              P   K   LE    +         C+       K  W KDG    I G+   R I +
Sbjct: 521 PKNPRIPKLHMLELHCESK--------CDLHLKHSLKLSWSKDGEAFEINGTEDGRIIID 572

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
             NL IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L
Sbjct: 573 GANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRL 630

Query: 700 RCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
              A  +   +++ YI    G +       EL          +L +  A F    ++  +
Sbjct: 631 SWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVI 687

Query: 759 VKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHY 811
             + VG+   ++ +   E PP  P      ++V         I+W          P   Y
Sbjct: 688 AVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 747

Query: 812 KIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELG 867
           ++        TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG
Sbjct: 748 RV--------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLG 792

Query: 868 YGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            G    P+PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I 
Sbjct: 793 SG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQIN 848

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           W K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 849 WWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|426249267|ref|XP_004018371.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Ovis aries]
          Length = 1209

 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 222/831 (26%), Positives = 361/831 (43%), Gaps = 80/831 (9%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           ++   ++ P  + + P  +KQ T  V F   +        + C A G P P + W K+D 
Sbjct: 20  KFSTAVDIPLSVQQVPTIVKQSTVQVAFPFDEY-----FQIECVAKGNPEPKFLWNKDDK 74

Query: 234 VQDRLVANLIDPLSDKRFTLS--GGNLII-NDPRQVEDRGSYHCKASNKFGSIISESVQL 290
             +         LSD R  +S  GG   I ND      +G Y C ASNK G  +SE ++ 
Sbjct: 75  PFN---------LSDPRIIVSNNGGTFRIPNDGHISHFQGKYRCFASNKLGIAMSEEIEF 125

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +F  ++   +  +     +  C+PP   P ++ YW        +++D+RV++S 
Sbjct: 126 IVPNTPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIEL-EHIKQDERVYMSQ 184

Query: 350 DGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
            G LYF+ +E+ D+ N Y C        T        L V   ++ +Q K     P+   
Sbjct: 185 KGDLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSSNSIKQRK-----PRLLL 239

Query: 409 EAPKAG----------DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFN-RILTIPN 457
             P++G          D + LEC A G P P   W + G  LP+    +N +   L I N
Sbjct: 240 PPPESGSESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESKNNSVDTLKIEN 299

Query: 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
           V  ED+G Y C A+N   +      ++++  P +T           +     CEA G P+
Sbjct: 300 VSYEDKGNYRCTANNFLGSATHEFHVTVEEPPRWTKKPQSGVYSTGSSGILLCEAEGRPE 359

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAMYQCRAKNQLKT 573
            T  W  NG       LP+E   R     +V++   I + N + +  A+YQC A N   T
Sbjct: 360 PTIKWRVNG-------LPIE---RNPFSGDVISPGEISFTNVQPNHTAVYQCEASNVHGT 409

Query: 574 RYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKK-DGNIIGS 631
             ++A + V+ ++P  +    + E YA   G +  + C   A+P+    W+K +      
Sbjct: 410 ILANANIDVVDVRPLIQTA--DEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEAKPLD 467

Query: 632 GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 691
           G R  + ENG L I+  + +D+G YSC   N  G       L + +  +     P    +
Sbjct: 468 GSRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNA-TNLRVSPKNPRV 526

Query: 692 AAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749
                L+L C +  +  L   +   W+ +G      ++N  +   I IDG  L I+N + 
Sbjct: 527 PKSHTLELHCESKCDSHLKYSLKLSWSKDGEA---FEINGTDDGRIIIDGANLTISNVTM 583

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 809
            D G Y C   + +  I+  T V V   P  P  + + E    S  + W  G  +   I+
Sbjct: 584 EDEGIYSCSAHTALDSIADMTQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDDHNSNIS 643

Query: 810 HYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
            Y +    N      W         +E+ R  G KE ++   L P+  Y+F+VIA NE+G
Sbjct: 644 EYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRYQFRVIAMNEVG 693

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
             +PS PS  + TP   P + P  I     +  ++ I WEPL   +QN P + Y++ W+ 
Sbjct: 694 RSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGLEYRVTWKP 753

Query: 928 KND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           +    E++ ET+  +       +R+ +   Y  Y+V+VQAIN +G GPE +
Sbjct: 754 QGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPEPQ 798


>gi|170044415|ref|XP_001849844.1| cell adhesion molecule [Culex quinquefasciatus]
 gi|167867576|gb|EDS30959.1| cell adhesion molecule [Culex quinquefasciatus]
          Length = 1218

 Score =  252 bits (644), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 207/730 (28%), Positives = 321/730 (43%), Gaps = 41/730 (5%)

Query: 256 GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKA 314
           G L+I  PR  ED G Y C A N+ G+  S SV +    +  F  + A  +  ++     
Sbjct: 39  GTLVIKSPRD-EDLGQYQCFAENEHGTATSNSVFVRKAELNSFKDESAKTVQVDEGMPFK 97

Query: 315 MFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSALEQIDAGN---YSCN 369
           M C PP  +P  N YW        +    + R+ +  +G L+FS + + D  +   Y+C 
Sbjct: 98  MQCQPPDGWPRPNVYWLIQNMDGGISSINNSRMTLDPEGNLWFSNVTRRDQSDDFWYACA 157

Query: 370 VQSKVSDTGRNGPFFPLKVFPH--SNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAFGY 426
             S   +  + G    L+V     S  Q    P   +     E    G K+ L C+  G 
Sbjct: 158 ASSLFRNEYKIGNRVVLQVKQTGISAAQNRHRPERQYVSRKNEVALRGKKIELFCIYGGT 217

Query: 427 PVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASNDRSALES-SVTI 483
           P+P   WT+ G  +  N   +  N+ + L I +   EDQG Y C +SN   + ES S+ +
Sbjct: 218 PLPQVVWTKDGRAIQWNDKIQQNNYGKSLVIKHATFEDQGTYTCESSNGVGSAESYSIRL 277

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            +QA P FT          +    + CEA GVP     W  NG+ +  +T P     R F
Sbjct: 278 EVQAIPYFTTQPESVIKAEEETAEFRCEATGVPKPNIIWIHNGKPI-EQTPP---NPRRF 333

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           +  N +    L  + D   Y C A N L   Y    L VL L P   + P    T   + 
Sbjct: 334 VSGNRIFFNKLE-KSDTGNYGCNATNSLGYVYKDVYLNVLALPPEISEPPRREHTV--DR 390

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
            NVT+ C    APKP+  W ++G  + +GGR ++   G+L I  V   D+G Y+C A N 
Sbjct: 391 RNVTLTCRVFGAPKPEVKWIRNGREL-TGGRYQVLPTGDLFIRGVEFSDAGQYTCNAVNK 449

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            G   + G LIV       ++ P    + A      RC+A  +  L +   W  NG  I 
Sbjct: 450 LGEKSADGELIVKEHTKIIDE-PQDYEVVAGTPATFRCNAVADSSLALTIEWLTNGEPI- 507

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
             D  + +   +  +   L IT     D G Y CV K+ + ++    T+ V   P  P  
Sbjct: 508 --DF-DTQPRFVMTNDYSLTITKTIELDTGVYSCVAKTDLDEVIANATLTVYDRPNAPS- 563

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRK 842
           ++ +E H+  AT+ WT    N  PI HY I   T++   TW   S+ V   +        
Sbjct: 564 LEGIECHQAVATLSWTPNGDNRSPILHYTIEYNTSFTPDTWEISSKDVPATDF------- 616

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             S++  + PWS Y F+VIA N++G   PS  S    T    P++ P  + G G +  +L
Sbjct: 617 TYSVD--MSPWSNYTFRVIAINKVGPSSPSGHSEVCTTQPSVPFKNPDNVEGQGTEPNNL 674

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
            I W P+   + NAP   Y+++W+     + + +E + ++    + +   P+   +  Y 
Sbjct: 675 VIKWTPMSEIEHNAPRFQYRVYWQLDTGVDNWNTEDIFDWQQTELVIRDQPT---FQRYR 731

Query: 962 VKVQAINDVG 971
           +KV AIN++G
Sbjct: 732 IKVVAINEMG 741



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 143/378 (37%), Gaps = 37/378 (9%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           I L C  GG P P   W K     D       D +    +   G +L+I      ED+G+
Sbjct: 208 IELFCIYGGTPLPQVVWTK-----DGRAIQWNDKIQQNNY---GKSLVIKHA-TFEDQGT 258

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWA 331
           Y C++SN  GS  S S++L    I  F  +    I  +       C+  T  P  N  W 
Sbjct: 259 YTCESSNGVGSAESYSIRLEVQAIPYFTTQPESVIKAEEETAEFRCE-ATGVPKPNIIWI 317

Query: 332 RDYFPNFVEE---DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
            +  P  +E+   + R FVS +  ++F+ LE+ D GNY CN  + +             V
Sbjct: 318 HNGKP--IEQTPPNPRRFVSGN-RIFFNKLEKSDTGNYGCNATNSLG-----------YV 363

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDK--VRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
           +       L  P    +  P      D+  V L C  FG P P   W R G  L    Y 
Sbjct: 364 YKDVYLNVLALPPEISEP-PRREHTVDRRNVTLTCRVFGAPKPEVKWIRNGRELTGGRYQ 422

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
                 L I  V+  D G+Y C A N      +   + ++          D  +      
Sbjct: 423 VLPTGDLFIRGVEFSDAGQYTCNAVNKLGEKSADGELIVKEHTKIIDEPQDYEVVAGTPA 482

Query: 507 TWTCEAFGVPD--VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           T+ C A       +T  W  NGE ++ +T P     R+ + ++         E D  +Y 
Sbjct: 483 TFRCNAVADSSLALTIEWLTNGEPIDFDTQP-----RFVMTNDYSLTITKTIELDTGVYS 537

Query: 565 CRAKNQLKTRYSSAQLRV 582
           C AK  L    ++A L V
Sbjct: 538 CVAKTDLDEVIANATLTV 555


>gi|296225704|ref|XP_002758612.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Callithrix jacchus]
          Length = 1209

 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 228/848 (26%), Positives = 365/848 (43%), Gaps = 70/848 (8%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           ME LL      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   METLLPRRGVIISLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P + W K+D    +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPIFTWTKDDNPFYFTDPRIITS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  +    +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVSDTGRNGP 382
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C        T     
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYPVPSYNWTRRG 437
              L V   ++ +Q K     P T   +  +     G+ + LEC A G P P  +W + G
Sbjct: 219 PMKLTVNSSNSIKQRKPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIG 278

Query: 438 SPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             LP+     EN+ + L I NV  +D+G Y C ASN          + ++  P +T    
Sbjct: 279 GDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKKPQ 338

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
                  ++    CEA G P  T  W  NG  +++        D  F ++  ++   L P
Sbjct: 339 SAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--VSFTNLQP 393

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAA 615
               A+YQC A N   T  ++A + ++ ++P  +    + E YA   G +  + C   A+
Sbjct: 394 NHT-AVYQCEASNVHGTILANANINIVDVRPLIQTE--DEENYATVVGYSAFLHCEFFAS 450

Query: 616 PKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+    W+K        GRR  I+ENG L I+  + +D+G YSC   N  G       L 
Sbjct: 451 PEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENSIGKTAVTANLD 510

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQL----RCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 730
           + +  +     P    I     L+L    +C AH +  L ++  W+ +G      ++N  
Sbjct: 511 IRNA-TKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLS--WSKDGEA---FEINGT 564

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 790
           E   I IDG  L I+N +  D G Y C   + +   +  T V V   P  P  + + E  
Sbjct: 565 EDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSERQ 624

Query: 791 KTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
             S  + W  G  +   I+ Y +    N         E    +E+ R  G+K   I   L
Sbjct: 625 NRSVRLTWEAGDDHNSNISEYIVEFEGN-------KEEPGRWEELTRVQGKKTTVILP-L 676

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL 
Sbjct: 677 APFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLK 736

Query: 911 REKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
             +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+VKVQAIN 
Sbjct: 737 SMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQ 790

Query: 970 VGPGPESE 977
           +G GP+ +
Sbjct: 791 LGSGPDPQ 798



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 142/593 (23%), Positives = 231/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 350 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREVSFTNLQPNHTAVYQCEASNVHGT 409

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I+I  +    I   D+  +N A +        CE F  P+   SW +       
Sbjct: 410 ILANANINI-VDVRPLIQTEDE--ENYATVVGYSAFLHCEFFASPEAIVSWQKV-----E 461

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 462 EAKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENSIGKTAVTANLDIRNATKLRVS 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 521 P---KNPRIPKLHMLEL-HCESKCDAHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 576

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS ++ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 577 TISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 634

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F    ++  +  + 
Sbjct: 635 GDDHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVIAMNE 691

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 692 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 749

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 750 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 794

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 795 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWKT 852

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 853 KSLLDGRTHPKEVNVLKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 905


>gi|344276065|ref|XP_003409830.1| PREDICTED: neural cell adhesion molecule L1-like protein [Loxodonta
           africana]
          Length = 1225

 Score =  252 bits (643), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 222/840 (26%), Positives = 356/840 (42%), Gaps = 86/840 (10%)

Query: 175 QYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           ++   IE P  + + P  IKQ    V F   +        + C A G P P + W K+D 
Sbjct: 20  KFSTAIEIPLSVQQAPTIIKQSKVQVAFPFDEY-----FQIECEAKGNPAPQFTWTKDDK 74

Query: 234 VQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL 290
             +         LSD R  +S   G   I N+      +G Y C A+NK G  +SE ++ 
Sbjct: 75  PFN---------LSDPRIIVSNNSGTFKIPNEGHIAHFQGKYRCFAANKLGVALSEEIEF 125

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
               + +F  ++   +  +     +  C+PP   P ++ YW        +E+D+RV++S 
Sbjct: 126 IVPSVPKFPKEKINPLEVEEGDSIVLPCNPPKGLPPLHIYWMNIEL-EHIEQDERVYMSQ 184

Query: 350 DGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPLKVFPHSN------------- 393
            G LYF+ +E+ D+ N  C   +  ++    +  P    +    H+N             
Sbjct: 185 KGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSSSTEIGSKAN 244

Query: 394 -FQQLKFPNNFPKT-----FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF- 446
             +Q K     P T       E    G+ + LEC A G P P   W + G  LP+     
Sbjct: 245 LIKQRKPRLLLPPTERGSRSSEVILKGETLLLECFAEGLPTPQVEWDKLGGDLPKGRVTK 304

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           EN+N+ L I NV   D+G Y C A+N          ++I+  P +T        + ++  
Sbjct: 305 ENYNKTLKIENVSYHDKGIYRCTANNFLGTATHDFHVTIEEPPRWTKKPQSGVYNTESSD 364

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD----NVLTIRYLNPERDPAM 562
              CEA G P  T  W  NG           + +  F+ D      ++   L P  + A+
Sbjct: 365 ILICEAEGEPQPTIKWRMNGS---------PNINHPFVVDVRSPKEISFTNLQP-NNTAV 414

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFV 621
            QC A N   T  ++A + V+ + P  +    + E YA   G +  + C   A+PK    
Sbjct: 415 LQCEASNIHGTILTNANVDVVDIHPLIQTE--DEENYAAVVGYSAFLHCVFFASPKASVS 472

Query: 622 WKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           W+K D      G R  I ENG L I+  + +D+G YSC   N  G       L + +  +
Sbjct: 473 WQKVDEAKPLEGIRYYIHENGTLQINKTTEEDAGPYSCWVENAKGKAAVTANLDIRNA-T 531

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINID 738
                P    +     L+L C + ++  L   +   W+ +G      ++N  E   I ID
Sbjct: 532 KLRVSPKNPRVPRSHILELHCESKSDSHLKHSLKLSWSKDG---EAFEINGTEDGRIIID 588

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
           G  L I N +  D G Y C+ ++ +   +  T V V   P  P  + + E    S  + W
Sbjct: 589 GANLTIANVTLEDQGVYSCLAQTALDSTADITQVTVLDLPDPPENLLLSERQNRSVRLSW 648

Query: 799 TDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
             G  +   I+ Y +    N      W         +E+ R  G KE ++   L P+  Y
Sbjct: 649 EAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVMLSLAPFVRY 698

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL   +QN 
Sbjct: 699 QFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNG 758

Query: 917 PNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+V+VQAIN +G GPE
Sbjct: 759 PGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINQLGSGPE 812


>gi|157118545|ref|XP_001659157.1| cell adhesion molecule [Aedes aegypti]
 gi|108875668|gb|EAT39893.1| AAEL008340-PA, partial [Aedes aegypti]
          Length = 1182

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 211/731 (28%), Positives = 326/731 (44%), Gaps = 43/731 (5%)

Query: 256 GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKA 314
           G L+I  PR  ED G Y C A N+ G+  S SV +    +  F  + A  I  ++     
Sbjct: 26  GTLVIKSPRD-EDLGQYQCFAENEHGTATSNSVFVRKAELNSFKDESAKTIDVDEGSPLK 84

Query: 315 MFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSALEQIDAGN---YSCN 369
           M C PP  +P  N YW        +    + R+ +  +G L+FS + + DA +   Y+C 
Sbjct: 85  MQCQPPDGWPRPNVYWLIQNMDGGISSINNSRMTLDPEGNLWFSNVTRGDASDDFVYACA 144

Query: 370 VQSKVSDTGRNGPFFPLKVFPH--SNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAFGY 426
             S   +  + G    L+V P   S  Q    P   +     E    G K+ + C+  G 
Sbjct: 145 ASSLFRNEYKIGNRVLLQVKPTGISAAQNKHRPERQYVSRKNEVALRGKKIEIFCIYGGT 204

Query: 427 PVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASNDRSALES-SVTI 483
           P+P   WT+ G P+  +   +  N+ + L I +   EDQG Y C +SN   + ES S+ +
Sbjct: 205 PLPQVVWTKDGRPIQWSDKIQQNNYGKSLVIKHASFEDQGTYTCESSNGVGSAESYSIRL 264

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
            +QA P FT      +        +TCEA GVP     W  NG+ L+      +   R  
Sbjct: 265 EVQAVPYFTKEPEIYNAAEDETAEFTCEASGVPKPNIIWIHNGKPLDQS----KPNPRRQ 320

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP-LESETYAGE 602
           +  N +    L  + D   Y C A N L   Y    L VL L P   + P LE   Y  +
Sbjct: 321 VSSNRIYFTKLE-KGDTGNYGCNATNSLGYVYKDVYLNVLALAPEITEPPKLE---YTVD 376

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
             NVT+ C    APKP+  W ++G  + +GG+ K+  NG+L I  V   D+G Y+C A N
Sbjct: 377 RRNVTMTCRVFGAPKPEVKWIRNGREL-TGGKFKVEANGDLFIRGVEFSDAGEYTCNAVN 435

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
             G   + G L+V       ++ P    + A      RC+A  +  L++   W  NG  I
Sbjct: 436 KLGEKSASGELVVKEHTKIIDE-PQDYEVVAGTPATFRCNAVADSSLELTIEWLTNGETI 494

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
              D  E +   +  +   L I+     D G Y C  ++ + ++    T+ V   P  P 
Sbjct: 495 ---DF-ESQPRFVMTNDYSLTISKTIELDTGVYTCFARTDLDEVMANATLTVYDRPNAPS 550

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGR 841
            ++ +E H+T AT+ W     N  PI HY I   T++   TW   S+ V   +       
Sbjct: 551 -LESIECHQTVATLSWKPNGDNRSPILHYTIEFNTSFTPDTWEISSKDVPATDF------ 603

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              S++  + PWS Y F+VIA N++G   PS  S    T    P++ P  + G G +  +
Sbjct: 604 -TYSVD--MSPWSNYTFRVIAINKVGPSLPSGHSDVCTTQPSVPFKNPDNVEGQGTEPNN 660

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           L I W P+   + NAP   Y+++W+     + + +E + ++    + VVR    F    Y
Sbjct: 661 LVIRWTPMSEIEHNAPRFQYRVYWQLDTGVDHWNTEDIFDWRQSEL-VVRDQETF--RRY 717

Query: 961 EVKVQAINDVG 971
            +KV AIN++G
Sbjct: 718 RIKVVAINELG 728



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 147/375 (39%), Gaps = 31/375 (8%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           I + C  GG P P   W K     D       D +    +   G +L+I      ED+G+
Sbjct: 195 IEIFCIYGGTPLPQVVWTK-----DGRPIQWSDKIQQNNY---GKSLVIKHA-SFEDQGT 245

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGK-AMFCDPPTNYPGVNYYW 330
           Y C++SN  GS  S S++L    +  F   + PEI N    + A F    +  P  N  W
Sbjct: 246 YTCESSNGVGSAESYSIRLEVQAVPYFT--KEPEIYNAAEDETAEFTCEASGVPKPNIIW 303

Query: 331 ARDYFP-NFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
             +  P +  + + R  VS +  +YF+ LE+ D GNY CN  + +    ++     L + 
Sbjct: 304 IHNGKPLDQSKPNPRRQVSSN-RIYFTKLEKGDTGNYGCNATNSLGYVYKDVYLNVLALA 362

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF 449
           P     ++  P     T          V + C  FG P P   W R G  L    +    
Sbjct: 363 P-----EITEPPKLEYTVDRR-----NVTMTCRVFGAPKPEVKWIRNGRELTGGKFKVEA 412

Query: 450 NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWT 509
           N  L I  V+  D GEY C A N      +S  + ++          D  +      T+ 
Sbjct: 413 NGDLFIRGVEFSDAGEYTCNAVNKLGEKSASGELVVKEHTKIIDEPQDYEVVAGTPATFR 472

Query: 510 CEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567
           C A      ++T  W  NG     ET+  E Q R+ + ++         E D  +Y C A
Sbjct: 473 CNAVADSSLELTIEWLTNG-----ETIDFESQPRFVMTNDYSLTISKTIELDTGVYTCFA 527

Query: 568 KNQLKTRYSSAQLRV 582
           +  L    ++A L V
Sbjct: 528 RTDLDEVMANATLTV 542


>gi|194891060|ref|XP_001977430.1| GG18259 [Drosophila erecta]
 gi|190649079|gb|EDV46357.1| GG18259 [Drosophila erecta]
          Length = 1239

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 216/805 (26%), Positives = 354/805 (43%), Gaps = 55/805 (6%)

Query: 188 RGPYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           R P   KQPT  +++F +++++  +D    + C A G P P Y W K     D       
Sbjct: 27  RPPRITKQPTPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFD------W 80

Query: 244 DPLSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
               ++     G G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + 
Sbjct: 81  QAYDNRMLRQPGRGTLVITIPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEA 139

Query: 303 APEIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSAL 358
           A  +        M  C  P  +P     W  ++     ++   + R+ +  +G L+FS +
Sbjct: 140 AKTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTLDPEGNLWFSNV 199

Query: 359 EQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPK 412
            + DA +   Y+C+  S      + G    L V     +  Q K P    +         
Sbjct: 200 TREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLAL 259

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRA 470
            G ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  
Sbjct: 260 RGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDV 319

Query: 471 SNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           SN     +S S+ +++ + P FT            ++ + C A GVP+   SW  NG+ +
Sbjct: 320 SNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPI 379

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
              T       R  + DN  TIR +N  + D   Y C A N L   Y    L V    P+
Sbjct: 380 EQST----PNPRRTVTDN--TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPT 433

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV 648
             + P    T   +G NVTI C    +PKP   W +  N + +GGR  +  NG+L I  V
Sbjct: 434 IAEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRSSNWL-TGGRYNVQANGDLEIQDV 490

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           +  D+G Y+C A N  G  ++ G L+V    +   Q P    +AA ++   RC+   ++ 
Sbjct: 491 TFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDT 549

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           L++   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + 
Sbjct: 550 LEIEIDWWKDGQSI---DF-ETQPRFVKANDNSLTIAKTMELDSGEYTCVARTRLDEATA 605

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVS 827
           +  +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    
Sbjct: 606 RANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY 664

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
           E V            ++S    + PW+ Y F+VIA N++G   PS+ S    T  D P++
Sbjct: 665 EKV---------PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFK 715

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGI 946
            P  + G G +  +L ISW P+P  + NAPN +Y + W++      +++  + ++    I
Sbjct: 716 NPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNI 775

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVG 971
            +   P+   + +Y +KV AIND G
Sbjct: 776 VIADQPT---FVKYLIKVVAINDRG 797


>gi|1708635|gb|AAC47451.1| neuroglian [Manduca sexta]
          Length = 1264

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 214/804 (26%), Positives = 351/804 (43%), Gaps = 62/804 (7%)

Query: 190 PYFIKQPT--DVVFDLSKRSILND---ITLSCYAGGYPNPSYEWFKE----DYVQDRLVA 240
           P  +KQPT  +++F +++   ++    I     A G P P Y W K     +Y       
Sbjct: 23  PKMVKQPTQEEILFQVAQAGEVDKPFIIECRGEAEGEPGPKYRWIKNGKPFEYTS----- 77

Query: 241 NLIDPLSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
                  ++    SG G L+++ PR  ED G Y C A N++G+  S SV +    +  F 
Sbjct: 78  -----YDNRILQQSGRGTLVVSKPRD-EDLGQYQCFAYNEWGTAASNSVFVRRAELNSFK 131

Query: 300 LKRAPEIGNQNWGK--AMFCDPPTNYPGVNYYWAR--DYFPNFVEEDKRVFVSYDGALYF 355
                ++     GK   + C+PP  +P    YW    D        + R+ +  +G L+F
Sbjct: 132 ETDGQQVVKAEEGKPFKLTCEPPDGHPKPKVYWMLQGDQGQLKTINNSRMTLDPEGNLWF 191

Query: 356 SALEQIDAG---NYSCNVQSKVSDTGRNGPFFPLKVFPHS---NFQQLKFPNNFPKTFPE 409
           S + + DA     Y C   S   +  + G    L V          +      +  T  E
Sbjct: 192 SNVTRNDASVDFAYICTANSIFRNEYKFGNKIYLDVTQTGISPTLNRHAPERQYTTTKIE 251

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF--ENFNRILTIPNVKVEDQGEYI 467
               G KV L C+  G P+P   W + G  +  +A    +N+ + L I     ED G Y 
Sbjct: 252 KALKGKKVELYCIYGGTPLPQIVWKKDGHNIIPSASITQDNYGKTLVIKYPNYEDSGTYT 311

Query: 468 CRASND-RSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           C  SN   +AL  S+ ++I+A P FT+    +++         CEA G P    +W  NG
Sbjct: 312 CEVSNGVGTALSYSIQLNIEAAPFFTVEPDVQNLAEGETAVIRCEAGGTPVPKITWIHNG 371

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           + +       E   R  +  N + I  L  ++D   Y C A + +   Y    + V ++ 
Sbjct: 372 KPIEQ----AEPNPRRQVTANSIVITDL-VKKDTGNYGCNATSSIGYVYKDVYINVQSIP 426

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 646
           P  K+ P E+ T   +G    + C    APKP   W +D ++  +GG+  I   G+L+I 
Sbjct: 427 PEIKEGP-ENLTKV-DGSEAVLKCRVFGAPKPIVKWMRD-DVDITGGKYNITSEGDLVIR 483

Query: 647 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
            VS  D G Y C A N  G   + G L V       ++ P    +AA  +   RC+A+ +
Sbjct: 484 DVSFTDVGTYQCYAKNKFGEKSAFGSLAVKKRTVITDK-PEDYEVAAGSSATFRCNANAD 542

Query: 707 ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
           + L +  +W ++G  I   D        +  D  LL I++ +  D+G+Y C+ K+ + + 
Sbjct: 543 DSLKLTIVWLNDGQLI---DFENQPRFRMTNDYSLL-ISDTTELDSGQYTCIAKTAIDEA 598

Query: 767 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFN 825
             + T+ V+  P  P  +  VE    +AT++W     N  P+  Y+I   T++   +W  
Sbjct: 599 RAQATLTVQDKPNPPA-LDGVECGAATATLRWRSMGDNRAPVVRYQIHYNTSFTPDSWAA 657

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
            ++HV   +          S    L PW+ Y F+VIA N++G   PSS S    T  D P
Sbjct: 658 AADHVPAIDT---------SWTVQLSPWANYTFRVIAVNKIGPSSPSSHSDVCTTQPDVP 708

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNV 944
           Y+ P  + G G    ++ ISW  +P+ + N P  YY + WR+     E+  E ++++   
Sbjct: 709 YKNPDNVKGEGSDPTNMVISWSKMPQIEHNGPGFYYLVSWRRNITGDEWNKEQVRDWQQT 768

Query: 945 GIAVVRIPSEFYYTEYEVKVQAIN 968
              V   P+   +  Y++KV A+N
Sbjct: 769 EYIVTNTPT---FQPYKIKVTAVN 789


>gi|432859188|ref|XP_004069056.1| PREDICTED: neurofascin-like [Oryzias latipes]
          Length = 1358

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 226/822 (27%), Positives = 368/822 (44%), Gaps = 71/822 (8%)

Query: 183 PDKIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQD 236
           P ++P  P     +KQP  ++    K  I++   +I + C A G P P++ W K      
Sbjct: 50  PIEVPLDPTIQQKLKQPPTIIKQSVKDYIVDPRDNIIIECEAKGNPTPTFLWRKN----- 104

Query: 237 RLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
                  +  +D R T+    G L I      R  +  G Y C ASN  G  +S  + L 
Sbjct: 105 ---GKFFNFGNDPRVTMQKHSGTLKIGFRPGERPEDYEGEYQCFASNDHGVAMSNKILLR 161

Query: 292 FGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 +  +   P +  +     + C+PP   P    +W  D   N + +++RV +  +
Sbjct: 162 VSKAPLWPKEILEPRVVTEGSPLILPCNPPPGLPPPQIFWM-DSNMNPIPQNERVSMGQN 220

Query: 351 GALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           G LYFS +   DA  +YSCN +   + T +    F L+V       + + P+    +  +
Sbjct: 221 GDLYFSNVHLQDAERDYSCNARFNFTHTIQQKNPFSLRVQTSRRVAESR-PSFLTPSGIQ 279

Query: 410 APKA---GDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFENFNRILTIPNVKVEDQGE 465
           + K      ++ LEC+A G P PS  W ++G+ LP +   FEN N++L + +V  ED G+
Sbjct: 280 SSKMVLRDQELLLECIAAGLPTPSITWFKKGAELPAKKVKFENNNKVLRVLSVSEEDAGD 339

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRN 525
           Y+C A+N+   +  ++++ ++A P +    T+  +         C A G P  T  WF +
Sbjct: 340 YVCTANNNVGMIRHTISVDVKAAPYWLDKPTNLILAPDEGGRLVCRANGKPKPTIQWFVD 399

Query: 526 GELLNSETLPLEDQD----RYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRYSSAQL 580
           GE       PLE  +    R  + D   TI + + E    A+YQC A NQ     ++A +
Sbjct: 400 GE-------PLEGSNSVRHREMLGD---TIIFRSVEIGSSAVYQCNASNQHGYLLANAFV 449

Query: 581 RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 639
            VL L P     P        E     + C    +P P+  W K+G   G  GG  + + 
Sbjct: 450 SVLDLSPMMLG-PKNQLIQVIENNRTFLDCPFFGSPLPEHRWFKNGQGSGLDGGHYRTYL 508

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
           NG+L I    R+D G Y+C A+N+ G  E++  L V   P+   Q P   +       + 
Sbjct: 509 NGSLEIKRTRREDEGTYTCVASNMLGKAENQVHLEVKE-PTRIVQAPVHQSAVRGTTARF 567

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 759
            C  +++  L V   WT +      +DL       +  D   L I+N +  DAG Y C+ 
Sbjct: 568 DCKVNSDPTLPVTVTWTKDD---KPLDLRW----RLKKDKDSLTISNINEGDAGTYTCMA 620

Query: 760 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTN 818
           KS + + S    + V G P  P  + + +    S  + W  G  +  PIT + +      
Sbjct: 621 KSAIDQDSVSARLTVLGRPDPPMDLDLSDPAARSVRLTWIPGNDHNSPITGFLVQFEEDR 680

Query: 819 WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
           W    W N++          ++G   + +   L P+  Y+F+VIA N +G  +PS PSP+
Sbjct: 681 WEPGRWQNLTS---------FSGDLNSVVLQ-LSPYVNYQFRVIAINSVGQSDPSQPSPR 730

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSE 936
           Y T    P   P  + G G +  ++ I+WEPL   ++N PN+ Y ++WR+K+  E + S 
Sbjct: 731 YKTSGAAPDAIPRGLRGWGTRNDNMEITWEPLQDLERNGPNLQYHVWWRRKDSGEQWDSG 790

Query: 937 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           T      V      + +   Y  YE+++QA N+ G GPES V
Sbjct: 791 TTPSSNYV------VQNTDTYVPYEIRIQASNEFGSGPESNV 826


>gi|297670836|ref|XP_002813560.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like protein-like [Pongo abelii]
          Length = 1225

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 223/864 (25%), Positives = 368/864 (42%), Gaps = 86/864 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEPLL      +  + +LL      ++   IE P  + + P  IKQ    V F       
Sbjct: 1   MEPLLSGRGLIVSLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFD---- 50

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
            +   + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 51  -DYFQIECEAKGNPEPTFSWTKDGNPFYFTDHRIITS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN---------FQQLKFPNNFPKTFPEAPKAG----------DKVRLEC 421
           P    +    H+N          +        PK      ++G          + + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKEETLLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  ++A + V+ ++P  +    + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTE--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K   +    GR+  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRQYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKNSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKE 834
            P  P  + + E    S  + W  GA +   I+ Y +    N      W         +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+ +Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVSYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGPESE 977
              Y  Y+VKVQAIN +G GP+ +
Sbjct: 791 PAVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 140/593 (23%), Positives = 230/593 (38%), Gaps = 71/593 (11%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I +    +    +  +  +N A +        CE F  P+   SW +       
Sbjct: 426 ILANANIDVV---DVRPLIQTEDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EVKPLEGRQYHIYENGTLQINRTT-EEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDSHLKNSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 HTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
             +   +++ YI    G +       EL          +L +  A F  + ++  +  + 
Sbjct: 651 GADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPL--APFV-SYQFRVIAVNE 707

Query: 763 VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHYKIIA 815
           VG+   ++ +   E PP  P      ++V         I+W          P   Y++  
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV-- 765

Query: 816 RTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEP 871
                 TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G  
Sbjct: 766 ------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG-- 810

Query: 872 SSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W K 
Sbjct: 811 --PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWKT 868

Query: 929 NDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
                     KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 869 KSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|266634534|dbj|BAI49425.1| neuroglian [Mythimna separata]
          Length = 1254

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 216/815 (26%), Positives = 355/815 (43%), Gaps = 72/815 (8%)

Query: 190 PYFIKQPT--DVVFDLSKRSILND-ITLSCYAGGYPNPSYEWFKEDY-VQDRLVANLIDP 245
           P  +KQPT  +++F +++   ++    + C A G P P Y W K     +     N I  
Sbjct: 24  PKIVKQPTQEEILFQVAQPGEVDKPFIIECEAEGEPAPKYRWIKNGKPFEYTSYDNRISQ 83

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
            S +      G L+I+ PR  ED G Y C A N++G+  S SV +    +  F    + +
Sbjct: 84  QSGR------GTLVISQPRD-EDLGQYQCFAYNEWGTAASNSVFVRRAELNSFKETDSQQ 136

Query: 306 IGNQNWGK--AMFCDPPTNYPGVNYYWAR--DYFPNFVEEDKRVFVSYDGALYFSALEQI 361
           +     GK   + C+PP  +P    YW    D        + R+ +  +G L+FS + ++
Sbjct: 137 VVVAEEGKPFKLTCEPPDGHPKPKVYWMLQGDQGQLKTINNSRMTLDPEGNLWFSNVTRL 196

Query: 362 DAGN-----------YSCNVQSKVSDTGRNGPFFPLKVFP---HSNFQQLKFPNNFPKTF 407
              N           Y C   S   +  + G    L+V      S   + +    +    
Sbjct: 197 WFSNVTRNDASVNFAYICTANSIFRNEYKFGNKIYLQVTETGIASTLNRHEPVRQYTTRK 256

Query: 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL--PRNAYFENFNRILTIPNVKVEDQGE 465
            E    G KV L C+  G P+P   W + G  +   +    +N+ + L I     EDQG 
Sbjct: 257 VEKALKGKKVELYCIYGGTPLPQIVWKKNGRSILSSQGITQDNYGKTLVIKYPTYEDQGT 316

Query: 466 YICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR 524
           Y C  SN     +S S+ ++I+A P FT+    +++         CEA G P    +W  
Sbjct: 317 YTCEVSNGVGTAQSYSILLNIEAAPFFTVEPEIQNLAEGESAEIKCEASGTPTPKITWIH 376

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG+ +       E   R  +  N + I  L  ++D   Y C A + +   Y    + V +
Sbjct: 377 NGKPIEQ----AEPNPRRQVTANTIVITNL-VKKDTGNYGCNATSSIGYVYKDVYINVQS 431

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 644
           + P  K+ P E+ T   +G    + C    APKP   W KD ++  +GG+  I   G+L+
Sbjct: 432 IPPEIKEGP-ENLTRV-DGSEAVLKCRVFGAPKPLVKWMKD-DVDVTGGKYNITPEGDLV 488

Query: 645 ISPVSRDDSGIYSCTATNVHGMDES------KGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
           I  VS  D G Y C A N  G   +      K R ++   P +YE       +AA  +  
Sbjct: 489 IRDVSYTDVGTYQCYAKNKFGEKSAFGSLDVKKRTVITDKPEHYE-------VAAGSSAT 541

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
            RC+A+ ++ L +  IW ++G +I   D        +  D  LL I++ +  D+GEY C+
Sbjct: 542 FRCNANADDSLKLQIIWLNDGQQI---DFENQPRFRMTNDYSLL-ISDTTELDSGEYTCI 597

Query: 759 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN 818
            ++ + +   + T+ V+  P  P  ++ +E H+ +AT++W     N  PI  Y I   T 
Sbjct: 598 ARTAIDEARAQATLTVQDKPN-PPVIESIECHEKTATLRWHSMGDNRAPILRYSIQYNTT 656

Query: 819 WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
           +   TW   S++V   +          S    L PW+ Y F+V A N++G   PSS S  
Sbjct: 657 FTPDTWDLASDNVPAIDT---------SWTVQLSPWANYTFRVAAWNKIGPSTPSSHSDV 707

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSE 936
             T  D P + P  + G G    ++ ISW  +P+ + N P  YY + WR+      +  E
Sbjct: 708 CTTQPDVPDKNPDNVVGEGSDPTNMVISWSKMPQIEHNGPGFYYLVSWRRNITGQPWSEE 767

Query: 937 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
            ++++      V   P+   +  Y++KV A+N  G
Sbjct: 768 QVRDWQQTDYVVTNTPT---FVPYKLKVTAVNYKG 799


>gi|301613548|ref|XP_002936266.1| PREDICTED: neurofascin-like [Xenopus (Silurana) tropicalis]
          Length = 1176

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 225/814 (27%), Positives = 357/814 (43%), Gaps = 65/814 (7%)

Query: 185 KIPRGPYFIK---QPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           K+P  P   +   QP  ++   +K  I++   +I + C A G P P + W K     +  
Sbjct: 39  KVPLDPNIQRDLIQPPTIIKQSAKNYIVDPRDNILIECEAQGNPYPMFSWTKNGKFYN-- 96

Query: 239 VANLIDPLSDKRFTLSGGNLIINDPRQVED-RGSYHCKASNKFGSIISESVQLAFG---F 294
           VA   DP    R       + I+   + ED  G Y C A N+ G+ +S  + L       
Sbjct: 97  VAK--DPRVSFRRRSGTLEIEIHGGGRPEDYEGEYQCSARNQHGTALSNKILLQVSRSPL 154

Query: 295 IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
             + NL   P + N+     + C+PP   P    +W        V+ DKRV    +G LY
Sbjct: 155 WPKENLD--PVVVNEGAFLILQCNPPHGLPPPVIFWMSSLMEPIVQ-DKRVSQGLNGDLY 211

Query: 355 FS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413
           FS  L Q    +YSCN +S  + T +    + LKV       + + P     T   + K 
Sbjct: 212 FSNVLRQDTQTDYSCNARSHFTHTIQQKNPYTLKVLTTRGVPE-RTPTFLLPTGTSSSKL 270

Query: 414 ---GDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFENFNRILTIPNVKVEDQGEYICR 469
               + + LEC+A G P P   W ++G  LP R   FENFN+ L I  V  ED GEY C+
Sbjct: 271 VLRDEDLLLECIASGVPTPDIMWYKKGGELPSRKLKFENFNKTLRIIGVSEEDSGEYFCQ 330

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           ASN   ++  ++++ ++A P +     +  +    +    C A G P  T  WF NG+  
Sbjct: 331 ASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGENGRLVCRASGSPKPTIQWFMNGD-- 388

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
              T        + I  + +  R +    + A+YQC A N+     ++A + +L + PS 
Sbjct: 389 --ATEVGAPNPNFEIAGDTIIFREVQ-SGNSAVYQCNASNEHGYLLANAFVSILDV-PSR 444

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLIS 646
              P        E     + C    +P P   W K+G   GS   GG  ++ ENG L I+
Sbjct: 445 MLGPRNQLIRVIEYNRTQLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYRVHENGTLEIN 502

Query: 647 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
            V ++D G Y+C ATN+ G  E+  RL V   P+   + P         ++ L C   ++
Sbjct: 503 TVRKEDQGKYTCVATNILGNAENTVRLEVKE-PTRIVKGPEDQIAKRGSSVHLDCRVRSD 561

Query: 707 ELLDVAYIWTHNGVRI---GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
             L +   W  +  ++     M  +E        DG  L I   +  D G Y CV K+ +
Sbjct: 562 SSLRLTVTWIKDDTQLYINSRMKKDE--------DG--LTIFGVAEKDQGAYTCVAKTEL 611

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-- 821
            + S+K  + ++  P  P  +++ E    S  + W  G  N  PIT + +    + +   
Sbjct: 612 DQDSSKAYLTIQDKPDPPQDLELTEPSVRSVRLTWVPGDDNNSPITGFIVQFEEDRHQPG 671

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
           TW N++   +   V+        S+   L P+  Y+F+V+A NELG   PS  S ++ T 
Sbjct: 672 TWHNLAS--VPANVN--------SVILQLSPYVNYQFRVLALNELGSSMPSPSSERFQTA 721

Query: 882 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 941
              P   P  + G G    ++ I+W PL   +   PN+ Y + WR+++  E  S  +  +
Sbjct: 722 GAPPETNPGDVKGAGTSKNNMEITWTPLNSTQAYGPNLRYNVKWRQRHTGEPWS-NITVW 780

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
            N  + V   P    YT+YE++VQA N+ G  PE
Sbjct: 781 DNKHV-VWNTP---VYTQYELRVQAENEFGKAPE 810



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 162/667 (24%), Positives = 268/667 (40%), Gaps = 81/667 (12%)

Query: 343 KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN 402
           K  F +++  L    + + D+G Y C   +K+    R+     +K  P+   +       
Sbjct: 304 KLKFENFNKTLRIIGVSEEDSGEYFCQASNKMGSI-RHTISVRVKAAPYWLDE------- 355

Query: 403 FPKTFPEAPKAGDKVRLECVAFGYPVPSYNW------TRRGSPLPRNAYFENFNRILTIP 456
            PK    AP  G+  RL C A G P P+  W      T  G+P P    FE     +   
Sbjct: 356 -PKNLILAP--GENGRLVCRASGSPKPTIQWFMNGDATEVGAPNPN---FEIAGDTIIFR 409

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD----NQADLTWTCEA 512
            V+  +   Y C ASN+   L ++  +SI   P+  +   ++ +     N+  L   C  
Sbjct: 410 EVQSGNSAVYQCNASNEHGYLLANAFVSILDVPSRMLGPRNQLIRVIEYNRTQLD--CPF 467

Query: 513 FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQL 571
           FG P  T  WF+NG+  N       D   Y + +N  L I  +  E D   Y C A N L
Sbjct: 468 FGSPIPTLRWFKNGQGSNL------DGGNYRVHENGTLEINTVRKE-DQGKYTCVATNIL 520

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN--PEAAPKPKFVWKKDGNII 629
               ++ +L V   +P+   +  E +  A  G +V + C    +++ +    W KD   +
Sbjct: 521 GNAENTVRLEVK--EPTRIVKGPEDQI-AKRGSSVHLDCRVRSDSSLRLTVTWIKDDTQL 577

Query: 630 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
               R K  E+G L I  V+  D G Y+C A      D SK  L +   P   + L  ++
Sbjct: 578 YINSRMKKDEDG-LTIFGVAEKDQGAYTCVAKTELDQDSSKAYLTIQDKPDPPQDL--EL 634

Query: 690 TIAAHRNLQLRCSAHTEELLDV-AYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT--- 745
           T  + R+++L      +    +  +I      R      + L +   N++  +L+++   
Sbjct: 635 TEPSVRSVRLTWVPGDDNNSPITGFIVQFEEDRHQPGTWHNLASVPANVNSVILQLSPYV 694

Query: 746 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWTDGATN 804
           N  F      E  + S++   S++       PP   PG V+     K +  I WT     
Sbjct: 695 NYQFRVLALNE--LGSSMPSPSSERFQTAGAPPETNPGDVKGAGTSKNNMEITWT----- 747

Query: 805 GRPITHYKIIA-RTNWNSTWFNVSEHVIGKEVDRYTGRKEASI---ENVLVPWST----- 855
             P+   +       +N  W             R+TG   ++I   +N  V W+T     
Sbjct: 748 --PLNSTQAYGPNLRYNVKWRQ-----------RHTGEPWSNITVWDNKHVVWNTPVYTQ 794

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL-PREKQ 914
           YE +V A NE G     S    Y+   D P  AP+ I         +S+ W  + P   Q
Sbjct: 795 YELRVQAENEFGKAPEPSTMIGYSG-EDYPKAAPTDIKLRVMNSTAISLQWTRVAPASIQ 853

Query: 915 NAPNIYYKIFWRKKNDTE--FQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG 971
            +   Y   FWR+ +  +  + S   ++   +G  V  I S+   Y+ Y++ + A+N  G
Sbjct: 854 GSLLEYRAYFWRESSLLKGVWVSRKKQQQSFMGDRVRGIVSQLIPYSIYKLYLVAVNGRG 913

Query: 972 PGPESEV 978
            GP+S+V
Sbjct: 914 DGPKSDV 920


>gi|291408744|ref|XP_002720662.1| PREDICTED: cell adhesion molecule with homology to L1CAM
           [Oryctolagus cuniculus]
          Length = 1227

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 215/801 (26%), Positives = 347/801 (43%), Gaps = 74/801 (9%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP---LSDKRFTLSGGNLIINDPRQVEDRG 270
           + C A G P P++ W K+D        NL DP   +SD     SG   I N+      +G
Sbjct: 55  IECEAKGNPEPTFRWTKDDKP-----FNLSDPRIIVSDN----SGTFRIPNEGPVSHFQG 105

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYY 329
            Y C ASN  G  +SE ++     + +F   K AP    +     + C+PP   P ++ Y
Sbjct: 106 KYRCFASNALGIAMSEEIEFIVPSVPKFPKEKIAPLEVEEGDPTVLPCNPPKGLPPLHIY 165

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPL 386
           W        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  P    +
Sbjct: 166 WMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTV 224

Query: 387 KVFPHSNFQQLKF-----PNNFPKTFP-----------EAPK---AGDKVRLECVAFGYP 427
               H+N   L        N+  +  P           E+P     GD + LEC A G P
Sbjct: 225 SSLKHANDSSLSTEIGSKANSIKQRKPRLLLPPAEEGAESPVIVLKGDTLLLECFAEGLP 284

Query: 428 VPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
            P   W + G  LP+     EN+ + L I +V   D+G Y C ASN       +  + ++
Sbjct: 285 TPQIEWNKMGGDLPKGRETKENYGKTLKIDDVSYRDRGNYRCTASNALGTASHNFHVVVE 344

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
             P +T         +       CEA G P  T +W  NG  L+   +     D  F ++
Sbjct: 345 EPPRWTKKPQSAVYSSGGSGVLLCEAEGEPQPTITWRVNGAPLDGHPVA---GDVIFPRE 401

Query: 547 NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGN 605
             ++   L P    A+YQC A N   T  ++A + V+ ++P  +    + E+Y A  G +
Sbjct: 402 --ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTE--DEESYPAVVGYS 456

Query: 606 VTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
             + C   A+P+    W+K +      G R  +  NG L IS V+ DD+G YSC   N  
Sbjct: 457 AFLHCEFFASPEAVVSWQKVEEASPLEGERYHVHRNGTLEISNVTEDDAGSYSCWVENAV 516

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRI 722
           G       L + +  +     P    +     L+L C + ++  L   +   W  +G   
Sbjct: 517 GKTAVTASLDIRNA-TKLSVSPKNPRVPRSHVLELHCESSSDSRLKPSLKLSWGKDGEA- 574

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
              + N  E   I IDG  L I+N +  D G Y C  ++ +   +  T V V   P  P 
Sbjct: 575 --FEANGTEDGRITIDGANLTISNVTSEDQGVYSCFAQTALDNAADVTRVTVLDVPDPPE 632

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTG 840
            +Q+      S  + W  G ++   I+ + +    N      W         +E+ R  G
Sbjct: 633 NLQLSHRQNRSVQLTWEAGDSHNSNISEFIVEFEGNKEEPGRW---------EELARVPG 683

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
            K+ ++   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  
Sbjct: 684 -KDTTVLLALAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVHASQPK 742

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           ++ I WEPL   +QN P + Y++ W+ +      E++ ET+  +       +R+ +   Y
Sbjct: 743 EMIIKWEPLKSMEQNGPGLEYRVTWKPQGASASVEWEEETVTNH------TLRVMTSMVY 796

Query: 958 TEYEVKVQAINDVGPGPESEV 978
             Y+V+VQA+N +G GPE + 
Sbjct: 797 APYDVQVQAVNQLGSGPEPQA 817



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 142/603 (23%), Positives = 227/603 (37%), Gaps = 77/603 (12%)

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRA 470
           +G    L C A G P P+  W   G+PL  +    +  F R ++  N++      Y C A
Sbjct: 360 SGGSGVLLCEAEGEPQPTITWRVNGAPLDGHPVAGDVIFPREISFTNLQPNHTAVYQCEA 419

Query: 471 SNDRSALESSVTIS-------IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWF 523
           SN    + ++  I        IQ E   + P    +          CE F  P+   SW 
Sbjct: 420 SNVHGTILANANIDVVDVRPLIQTEDEESYPAVVGY-----SAFLHCEFFASPEAVVSWQ 474

Query: 524 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV- 582
           +       E  PLE +  +  ++  L I  +  E D   Y C  +N +     +A L + 
Sbjct: 475 KV-----EEASPLEGERYHVHRNGTLEISNVT-EDDAGSYSCWVENAVGKTAVTASLDIR 528

Query: 583 ----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEA----APKPKFVWKKDGNIIGSGGR 634
               L++ P   K P    ++  E     + C   +     P  K  W KDG    + G 
Sbjct: 529 NATKLSVSP---KNPRVPRSHVLE-----LHCESSSDSRLKPSLKLSWGKDGEAFEANGT 580

Query: 635 ---RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 691
              R   +  NL IS V+ +D G+YSC A           R+ VL  P   E L  +++ 
Sbjct: 581 EDGRITIDGANLTISNVTSEDQGVYSCFAQTALDNAADVTRVTVLDVPDPPENL--QLSH 638

Query: 692 AAHRNLQLRCSA---HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 748
             +R++QL   A   H   + +    +  N    G  +    E   +      + +  A 
Sbjct: 639 RQNRSVQLTWEAGDSHNSNISEFIVEFEGNKEEPGRWE----ELARVPGKDTTVLLALAP 694

Query: 749 FADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG-GVQVVEVHKTS---ATIQWT--DG 801
           +    ++  +  + VG+   ++ +   E PP  P    Q + VH +      I+W     
Sbjct: 695 YVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVHASQPKEMIIKWEPLKS 753

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
                P   Y    R  W     + S     + V  +T R   S+  V  P   Y+ +V 
Sbjct: 754 MEQNGPGLEY----RVTWKPQGASASVEWEEETVTNHTLRVMTSM--VYAP---YDVQVQ 804

Query: 862 AGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           A N+LG G    P PQ  T     D P  AP   G        + ++W  +P+++ +   
Sbjct: 805 AVNQLGSG----PEPQAVTLYSGEDYPDTAPVVHGVDVVNSTLVKVTWSTIPKDRVHGHL 860

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGP 974
             Y+I W K           KE   +  +  R    +PS   ++E+ + V A N  G GP
Sbjct: 861 KGYQISWWKTRSLLDGRVHPKEVKTLRFSGQRNHGMLPSLDAFSEFHLTVLAYNSKGAGP 920

Query: 975 ESE 977
           ESE
Sbjct: 921 ESE 923


>gi|410899607|ref|XP_003963288.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Takifugu rubripes]
          Length = 1314

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 200/798 (25%), Positives = 344/798 (43%), Gaps = 84/798 (10%)

Query: 212 ITLSCYAGGYPNPSYEWFK--EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
           + + C A G P P Y W K  E +V  R         S  +   + G+ +++  + ++ +
Sbjct: 104 VEIQCEARGNPPPEYRWTKDGEGFVPPRA--------STTKTQHTDGSFVLHKKQFIQFQ 155

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPGVNY 328
           G Y C A NK G+ ++E +QL       F  +   P + ++     + C+PP        
Sbjct: 156 GVYRCYAFNKLGTAMTEDIQLIVPTAPSFPKVGVPPIVVDEGDPITLHCNPPKGAVPRQL 215

Query: 329 YWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
           +W        +++D+RV +  DG LYF+ AL+     +Y CN +                
Sbjct: 216 FWMSLDL-QLIQQDERVSMGTDGNLYFAHALKNDTRQDYCCNAK---------------- 258

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKA-------------------GDKVRLECVAFGYPV 428
            FP       K         PEAP                     G++++LEC+  GYP+
Sbjct: 259 -FPKLRTMVQKIGMAISVRIPEAPPMRMPSMLLPPGVQTEKVVLKGERLQLECIPGGYPI 317

Query: 429 PSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
           P   W + G  L     F+NF ++L + + +  D G+Y+C+A N          + ++  
Sbjct: 318 PKIKWMKMGEKLSSRTQFDNFGKLLLLSDTEENDGGKYMCKAQNAAGEAVHYFDVIVEEP 377

Query: 489 PN-FTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           P   T P  D+     +D+   C   G P    +W +NGEL   +      Q+   + D+
Sbjct: 378 PKWLTEPPRDQLTVIGSDVHIKCSVSGKPPPDITWRKNGELFTDDP-----QNNRRVLDD 432

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNV 606
            + +    PE D A+YQC A N   +  ++  + V+ + P    R  +S+ Y   +G +V
Sbjct: 433 TVVLHNAGPE-DTAVYQCDASNSHGSLLANINIMVMNMAPRILTR--DSQEYPVVQGADV 489

Query: 607 TIFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 665
            + C+   +P P   W +        GGR    +NG+L I  V ++D G Y C A N  G
Sbjct: 490 VMNCSVFGSPPPTVSWSRGATQETIEGGRFFALQNGSLQIIGVEKEDGGKYVCVALNAEG 549

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIG 723
                  L V   P+     P    + +    QL C A  ++ L  ++  +W  +G    
Sbjct: 550 KSAVSAMLEV-KDPTRIISRPQDAEVVSGTTAQLNCLAEYDKSLQDSFELVWRKDG---E 605

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           ++ L   E     +DG +L+I N   +D G Y CV ++++ + +    + V   P  P  
Sbjct: 606 DIPLAVQENSRHGVDGAVLQIINVDLSDNGLYTCVARTSLDEENATALLTVLDVPDAPLK 665

Query: 784 VQVVEVHK-TSATIQWTDGATNGRPITHYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGR 841
           +++ E+    + ++ W  G+ +   +T + +    + W    +   + V G         
Sbjct: 666 LEISEIRSPRNISLSWVPGSDHNSSVTEFVVEYEESQWEPGRWRDFQRVPG--------- 716

Query: 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            +A+    L     Y+F+V A N +G G PS P+ ++ TP   P + P  I   G +   
Sbjct: 717 NQATAMLALQGDLDYKFRVYAVNAVGPGPPSDPTERHKTPPAAPEKNPQSIKIQGHRPHQ 776

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           + ISWEPL   + N P + YK+ +R+   + E++   +K +      VVR  S F    Y
Sbjct: 777 MDISWEPLLPIEHNGPGLEYKVSYRRLGVEEEWKEHLVKRHS----FVVRNVSTF--VPY 830

Query: 961 EVKVQAINDVGPGPESEV 978
           EVK+Q+ N+ G GPE +V
Sbjct: 831 EVKIQSKNNQGWGPEPKV 848


>gi|224066631|ref|XP_002186633.1| PREDICTED: neural cell adhesion molecule L1-like protein
           [Taeniopygia guttata]
          Length = 1225

 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 218/833 (26%), Positives = 365/833 (43%), Gaps = 76/833 (9%)

Query: 180 IENPDKIPRGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           IE P  + + P   +Q  T V +   +     D T+ C A G P P++ W K+       
Sbjct: 25  IEIPLSVSQLPTITEQSHTQVAYPFDE-----DFTIKCEARGNPQPTFNWTKD------- 72

Query: 239 VANLIDPLSDKRFTLS--GGNLIINDPRQVED-RGSYHCKASNKFGSIISESVQLAFGFI 295
                +  SD R   S   G  +I +   + + +G Y C ASN  G+ +SE ++L    +
Sbjct: 73  -GKPFNLSSDPRIVTSNNSGTFVIQNRGIINNFQGKYRCFASNVLGTAMSEEIELIVPSV 131

Query: 296 GEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
            +F  ++   +  ++    +  C+PP   P ++ YW        + +D+RV +S  G LY
Sbjct: 132 PKFPKEKIEPLDVEHGDSVILHCNPPKGIPPLHIYWMNIDL-QHIPQDERVSMSLKGDLY 190

Query: 355 FSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN------NF---- 403
           F+ +E+ D+  +Y C        T        LKV    +      PN      NF    
Sbjct: 191 FANVEESDSRSDYCCFAAFPRLRTIVQKMPMTLKVSRLKHANDSGSPNAAVTKANFIKER 250

Query: 404 -PKTF--PEAPKAGDKVR--------LECVAFGYPVPSYNWTRRGSPLPRNA-YFENFNR 451
            PK    PE+  +   V         LEC+A G P P  +W +    +P++    ENF +
Sbjct: 251 KPKLLIPPESAGSSSSVTVIKGGVLLLECIAEGLPTPHLSWVKVTGNMPKDEPETENFGK 310

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE 511
           +L I  V   D+G Y C ASN          + ++  P +            A+L   CE
Sbjct: 311 MLKIDQVTAADEGTYQCTASNPMGRARHEFHVRVEEPPQWLKKPEGGVYSVGANLVLLCE 370

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQL 571
           A G P+ +  W  NG  ++  T     + R   ++  LT   L   +D A++QC A N+ 
Sbjct: 371 AIGNPEPSIQWKLNGMPIDGRTF----RGRVSTREISLTNLQL---QDSAVFQCEATNKH 423

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG- 630
            T  +SA + VL + P     P E       G +  + C+  A+P     W KD +I   
Sbjct: 424 GTILASANVNVLNIAP-LILTPDEENYATVVGYSAFLHCDIFASPAADVRWTKDDSIEPL 482

Query: 631 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 690
           S    ++ +NG L I    ++DSG Y+C A+N  G       L +          P    
Sbjct: 483 STFHYELNKNGTLEIRDAKKEDSGSYACWASNSVGKRAITANLDIRDATKLV-VTPKNPR 541

Query: 691 IAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 748
           +    ++ L+C A  +  L  ++   W  +G     + +N  E   I +D   L I++  
Sbjct: 542 VLKSHSILLKCQAEYDSHLKHSFKLSWRKDG---DELPVNSTEGGRIILDRDTLFISSVL 598

Query: 749 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
             D G Y CV  + +     +T +IV   P  P  +Q+ E    S  + W  GA++  P+
Sbjct: 599 LEDQGVYRCVASTALDSAEAETQLIVLDVPDPPEDLQLSENQNRSVRLSWKAGASHNSPV 658

Query: 809 THYKIIARTN-WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
               I    N W    W         +E+ R  G    ++ + L P+  Y+F+V++ N +
Sbjct: 659 NESIIEFEENRWEPERW---------QELSRVPGNDTTALLS-LAPYVNYQFRVVSVNAV 708

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G  +PS+PS +Y TP   P + P  I     +  ++ + WEPL   ++N P + YK+ WR
Sbjct: 709 GRSQPSTPSLRYATPPAAPDKNPENIRVEASEPNEMVMKWEPLKPMERNGPGLEYKVSWR 768

Query: 927 KKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++  +T++  E +K++    ++V  +P+   +  YE+KVQA+N++G GPE  +
Sbjct: 769 QRGVETDWNEELVKKH---SLSVRNVPT---FVPYEIKVQAVNNLGSGPEPNI 815


>gi|242019922|ref|XP_002430407.1| Neuroglian precursor, putative [Pediculus humanus corporis]
 gi|212515537|gb|EEB17669.1| Neuroglian precursor, putative [Pediculus humanus corporis]
          Length = 1253

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 223/805 (27%), Positives = 348/805 (43%), Gaps = 60/805 (7%)

Query: 190 PYFIKQP--TDVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  IKQP   +++F ++K+   ND    + C A G P P Y W K     +  V      
Sbjct: 25  PRIIKQPPTDELLFQVAKQQNENDKPFFIECEAEGEPAPKYRWIKNGKPFEYQVY----- 79

Query: 246 LSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
             D R +     G L+I  PR  ED G Y C A N +G+  S SV +    +  F     
Sbjct: 80  --DNRMSQQPGRGTLVITSPRD-EDLGQYQCFAENTWGTATSNSVFVRKAELNAFK-DEP 135

Query: 304 PEIGNQNWGKA--MFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSALE 359
           P   N N G+   + C PP  +P  N YW        +    + R+ +  +G L+FS + 
Sbjct: 136 PITVNANEGEPFRLVCHPPDGWPKPNVYWLIQNSDGGIMSINNSRMTLDPEGNLWFSNVT 195

Query: 360 QIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPH--SNFQQLKFP-NNFPKTFPEAPKA 413
           + D+     Y C   S   +  + G    LKV     +  Q  + P   +     E    
Sbjct: 196 REDSSKEFRYVCAATSPFRNEYKIGNTVALKVIATGIAASQNRQEPVQQYVSRKNEIALR 255

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRAS 471
           G +V L C+  G P+P   W++ G P+  N      ++ + L I +V  ED G Y+C AS
Sbjct: 256 GKRVELFCIFGGTPLPQIVWSKDGQPIRLNDRMTQGHYGKSLIIKHVTFEDAGSYVCEAS 315

Query: 472 NDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
           N     +S S+ +++ A P FT+     +      + + CEA GVP+    W  NG    
Sbjct: 316 NGVGQAKSYSIGLTVLAVPYFTVQPEIINAAEGETVEFRCEANGVPEPQIKWIHNG---- 371

Query: 531 SETLPLE---DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
              LP+       R  +  N + I  L+ + D   Y C A N L   Y    + VL L P
Sbjct: 372 ---LPIALAPPNPRRKVTPNSIVIEKLD-KLDTGNYGCNATNSLGYVYKDVYVNVLALPP 427

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP 647
                P + ET   +G  V + C    APKP+  W ++   + +GGR     +G+L I  
Sbjct: 428 EILTSPTDKETV--DGRTVILTCRVFGAPKPEVKWIRNSMEL-TGGRYNTLSSGDLEIKD 484

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
           V+  D+G Y+C A N  G  E+ G L V    +     P    I        RC+A T+ 
Sbjct: 485 VNFLDAGQYTCYAQNKFGHIEASGSLSVKEH-TKITDAPEDYEIPIGTTATFRCNAVTDS 543

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
            L +   W  +G  I   D +  E   +      L IT  +  D+G Y C+ K+ + K  
Sbjct: 544 TLALTIDWLKDGEVI---DFDS-EPRFVKSADYSLTITKTTELDSGVYTCLAKTDLDKAE 599

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
            + T+ V+  P  P  ++V + ++  A+I+W     N  PI  Y I   T++    + V+
Sbjct: 600 AQATLTVQDVPNAPRLIKV-QCNRMDASIRWEPLGDNRAPILSYTIQYNTSFAPDIWEVA 658

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
              +      Y+          + PW  Y F+V+A N++G   PS  S    T  D PY+
Sbjct: 659 YDNVPSIDQTYS--------VAMSPWVNYTFRVLARNKIGISLPSGHSEVCQTQPDVPYK 710

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGI 946
            P  + G G    +L ISW P+P  + N    +Y ++W+K    + + SE + ++    +
Sbjct: 711 NPDNVEGKGTHPNNLVISWTPMPEIEHNDEGFHYVVYWKKNIPGQNWNSEDVMDWQRSSL 770

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVG 971
            +   P+   + EY++KV AIN  G
Sbjct: 771 VISDQPT---FQEYKIKVIAINRRG 792


>gi|224586970|gb|ACN58584.1| RT01988p [Drosophila melanogaster]
          Length = 1108

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 215/805 (26%), Positives = 353/805 (43%), Gaps = 55/805 (6%)

Query: 188 RGPYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           R P   KQP   +++F +++++  +D    + C A G P P Y W K     D       
Sbjct: 4   RPPRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFD------W 57

Query: 244 DPLSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
               ++     G G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + 
Sbjct: 58  QAYDNRMLRQPGRGTLVITIPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEA 116

Query: 303 APEIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSAL 358
           A  +        M  C  P  +P     W  ++     ++   + R+ +  +G L+FS +
Sbjct: 117 AKTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTLDPEGNLWFSNV 176

Query: 359 EQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPK 412
            + DA +   Y+C+  S      + G    L V     +  Q K P    +         
Sbjct: 177 TREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLAL 236

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRA 470
            G ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  
Sbjct: 237 RGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDV 296

Query: 471 SNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           SN     +S S+ +++ + P FT            ++ + C A GVP+   SW  NG+ +
Sbjct: 297 SNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPI 356

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
              T       R  + DN  TIR +N  + D   Y C A N L   Y    L V    P+
Sbjct: 357 EQST----PNPRRTVTDN--TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPT 410

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV 648
             + P    T   +G NVTI C    +PKP   W +  N + +GGR  +  NG+L I  V
Sbjct: 411 ISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDV 467

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           +  D+G Y+C A N  G  ++ G L+V    +   Q P    +AA ++   RC+   ++ 
Sbjct: 468 TFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDT 526

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           L++   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + 
Sbjct: 527 LEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATA 582

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVS 827
           +  +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    
Sbjct: 583 RANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY 641

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
           E V            ++S    + PW+ Y F+VIA N++G   PS+ S    T  D P++
Sbjct: 642 EKV---------PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFK 692

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGI 946
            P  + G G +  +L ISW P+P  + NAPN +Y + W++      +++  + ++    I
Sbjct: 693 NPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNI 752

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVG 971
            +   P+   + +Y +KV AIND G
Sbjct: 753 VIADQPT---FVKYLIKVVAINDRG 774


>gi|386764048|ref|NP_001245581.1| neuroglian, isoform G [Drosophila melanogaster]
 gi|383293281|gb|AFH07295.1| neuroglian, isoform G [Drosophila melanogaster]
          Length = 1309

 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 215/805 (26%), Positives = 353/805 (43%), Gaps = 55/805 (6%)

Query: 188 RGPYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           R P   KQP   +++F +++++  +D    + C A G P P Y W K     D       
Sbjct: 27  RPPRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFD------W 80

Query: 244 DPLSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
               ++     G G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + 
Sbjct: 81  QAYDNRMLRQPGRGTLVITIPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEA 139

Query: 303 APEIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSAL 358
           A  +        M  C  P  +P     W  ++     ++   + R+ +  +G L+FS +
Sbjct: 140 AKTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTLDPEGNLWFSNV 199

Query: 359 EQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPK 412
            + DA +   Y+C+  S      + G    L V     +  Q K P    +         
Sbjct: 200 TREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLAL 259

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRA 470
            G ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  
Sbjct: 260 RGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDV 319

Query: 471 SNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           SN     +S S+ +++ + P FT            ++ + C A GVP+   SW  NG+ +
Sbjct: 320 SNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPI 379

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
              T       R  + DN  TIR +N  + D   Y C A N L   Y    L V    P+
Sbjct: 380 EQST----PNPRRTVTDN--TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPT 433

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV 648
             + P    T   +G NVTI C    +PKP   W +  N + +GGR  +  NG+L I  V
Sbjct: 434 ISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDV 490

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           +  D+G Y+C A N  G  ++ G L+V    +   Q P    +AA ++   RC+   ++ 
Sbjct: 491 TFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDT 549

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           L++   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + 
Sbjct: 550 LEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATA 605

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVS 827
           +  +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    
Sbjct: 606 RANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY 664

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
           E V            ++S    + PW+ Y F+VIA N++G   PS+ S    T  D P++
Sbjct: 665 EKV---------PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFK 715

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGI 946
            P  + G G +  +L ISW P+P  + NAPN +Y + W++      +++  + ++    I
Sbjct: 716 NPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNI 775

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVG 971
            +   P+   + +Y +KV AIND G
Sbjct: 776 VIADQPT---FVKYLIKVVAINDRG 797


>gi|195355114|ref|XP_002044038.1| GM21680 [Drosophila sechellia]
 gi|194129291|gb|EDW51334.1| GM21680 [Drosophila sechellia]
          Length = 1305

 Score =  249 bits (636), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 215/805 (26%), Positives = 353/805 (43%), Gaps = 55/805 (6%)

Query: 188 RGPYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           R P   KQP   +++F +++++  +D    + C A G P P Y W K     D       
Sbjct: 27  RPPRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFD------W 80

Query: 244 DPLSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
               ++     G G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + 
Sbjct: 81  QAYDNRMLRQPGRGTLVITIPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEA 139

Query: 303 APEIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSAL 358
           A  +        M  C  P  +P     W  ++     ++   + R+ +  +G L+FS +
Sbjct: 140 AKTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTLDPEGNLWFSNV 199

Query: 359 EQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPK 412
            + DA +   Y+C+  S      + G    L V     +  Q K P    +         
Sbjct: 200 TREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLAL 259

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRA 470
            G ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  
Sbjct: 260 RGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDV 319

Query: 471 SNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           SN     +S S+ +++ + P FT            ++ + C A GVP+   SW  NG+ +
Sbjct: 320 SNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPI 379

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
              T       R  + DN  TIR +N  + D   Y C A N L   Y    L V    P+
Sbjct: 380 EQST----PNPRRTVTDN--TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPT 433

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV 648
             + P    T   +G NVTI C    +PKP   W +  N + +GGR  +  NG+L I  V
Sbjct: 434 ISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDV 490

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           +  D+G Y+C A N  G  ++ G L+V    +   Q P    +AA ++   RC+   ++ 
Sbjct: 491 TFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDT 549

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           L++   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + 
Sbjct: 550 LEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATA 605

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVS 827
           +  +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    
Sbjct: 606 RANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY 664

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
           E V            ++S    + PW+ Y F+VIA N++G   PS+ S    T  D P++
Sbjct: 665 EKV---------PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFK 715

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGI 946
            P  + G G +  +L ISW P+P  + NAPN +Y + W++      +++  + ++    I
Sbjct: 716 NPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNI 775

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVG 971
            +   P+   + +Y +KV AIND G
Sbjct: 776 VIADQPT---FVKYLIKVVAINDRG 797


>gi|426249265|ref|XP_004018370.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
           [Ovis aries]
          Length = 1225

 Score =  249 bits (635), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 220/842 (26%), Positives = 365/842 (43%), Gaps = 86/842 (10%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           ++   ++ P  + + P  +KQ T  V F   +        + C A G P P + W K+D 
Sbjct: 20  KFSTAVDIPLSVQQVPTIVKQSTVQVAFPFDEY-----FQIECVAKGNPEPKFLWNKDDK 74

Query: 234 VQDRLVANLIDPLSDKRFTLS--GGNLII-NDPRQVEDRGSYHCKASNKFGSIISESVQL 290
             +         LSD R  +S  GG   I ND      +G Y C ASNK G  +SE ++ 
Sbjct: 75  PFN---------LSDPRIIVSNNGGTFRIPNDGHISHFQGKYRCFASNKLGIAMSEEIEF 125

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +F  ++   +  +     +  C+PP   P ++ YW        +++D+RV++S 
Sbjct: 126 IVPNTPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIEL-EHIKQDERVYMSQ 184

Query: 350 DGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPLKVFPH-----SNFQQLKFPN 401
            G LYF+ +E+ D+ N  C   +  ++    +  P    +    H     S+ + +   N
Sbjct: 185 KGDLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHVNDSSSSTENISKAN 244

Query: 402 NF----PKTFPEAPKAG----------DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
           +     P+     P++G          D + LEC A G P P   W + G  LP+    +
Sbjct: 245 SIKQRKPRLLLPPPESGSESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESK 304

Query: 448 NFN-RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           N +   L I NV  ED+G Y C A+N   +      ++++  P +T           +  
Sbjct: 305 NNSVDTLKIENVSYEDKGNYRCTANNFLGSATHEFHVTVEEPPRWTKKPQSGVYSTGSSG 364

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAM 562
              CEA G P+ T  W  NG       LP+E   R     +V++   I + N + +  A+
Sbjct: 365 ILLCEAEGRPEPTIKWRVNG-------LPIE---RNPFSGDVISPGEISFTNVQPNHTAV 414

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFV 621
           YQC A N   T  ++A + V+ ++P  +    + E YA   G +  + C   A+P+    
Sbjct: 415 YQCEASNVHGTILANANIDVVDVRPLIQTA--DEENYATVVGYSAFLHCEFFASPEAIVS 472

Query: 622 WKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           W+K +      G R  + ENG L I+  + +D+G YSC   N  G       L + +  +
Sbjct: 473 WQKVEEAKPLDGSRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNA-T 531

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINID 738
                P    +     L+L C +  +  L   +   W+ +G      ++N  +   I ID
Sbjct: 532 NLRVSPKNPRVPKSHTLELHCESKCDSHLKYSLKLSWSKDGEA---FEINGTDDGRIIID 588

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
           G  L I+N +  D G Y C   + +  I+  T V V   P  P  + + E    S  + W
Sbjct: 589 GANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLDVPDPPENLHLSERQNRSVRLTW 648

Query: 799 TDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
             G  +   I+ Y +    N      W         +E+ R  G KE ++   L P+  Y
Sbjct: 649 EAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRY 698

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL   +QN 
Sbjct: 699 QFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNG 758

Query: 917 PNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+V+VQAIN +G GPE
Sbjct: 759 PGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPE 812

Query: 976 SE 977
            +
Sbjct: 813 PQ 814


>gi|17530861|ref|NP_511090.1| neuroglian, isoform A [Drosophila melanogaster]
 gi|45554534|ref|NP_996380.1| neuroglian, isoform C [Drosophila melanogaster]
 gi|281360613|ref|NP_001162704.1| neuroglian, isoform D [Drosophila melanogaster]
 gi|281360617|ref|NP_001162706.1| neuroglian, isoform F [Drosophila melanogaster]
 gi|442615512|ref|NP_001259336.1| neuroglian, isoform H [Drosophila melanogaster]
 gi|6760659|gb|AAA28728.2| neuroglian precursor [Drosophila melanogaster]
 gi|7290947|gb|AAF46387.1| neuroglian, isoform A [Drosophila melanogaster]
 gi|16182525|gb|AAL13513.1| GH03573p [Drosophila melanogaster]
 gi|45446861|gb|AAS65287.1| neuroglian, isoform C [Drosophila melanogaster]
 gi|272506036|gb|ACZ95239.1| neuroglian, isoform D [Drosophila melanogaster]
 gi|272506038|gb|ACZ95241.1| neuroglian, isoform F [Drosophila melanogaster]
 gi|440216537|gb|AGB95180.1| neuroglian, isoform H [Drosophila melanogaster]
          Length = 1239

 Score =  249 bits (635), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 215/805 (26%), Positives = 353/805 (43%), Gaps = 55/805 (6%)

Query: 188 RGPYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           R P   KQP   +++F +++++  +D    + C A G P P Y W K     D       
Sbjct: 27  RPPRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFD------W 80

Query: 244 DPLSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
               ++     G G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + 
Sbjct: 81  QAYDNRMLRQPGRGTLVITIPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEA 139

Query: 303 APEIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSAL 358
           A  +        M  C  P  +P     W  ++     ++   + R+ +  +G L+FS +
Sbjct: 140 AKTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTLDPEGNLWFSNV 199

Query: 359 EQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPK 412
            + DA +   Y+C+  S      + G    L V     +  Q K P    +         
Sbjct: 200 TREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLAL 259

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRA 470
            G ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  
Sbjct: 260 RGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDV 319

Query: 471 SNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           SN     +S S+ +++ + P FT            ++ + C A GVP+   SW  NG+ +
Sbjct: 320 SNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPI 379

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
              T       R  + DN  TIR +N  + D   Y C A N L   Y    L V    P+
Sbjct: 380 EQST----PNPRRTVTDN--TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPT 433

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV 648
             + P    T   +G NVTI C    +PKP   W +  N + +GGR  +  NG+L I  V
Sbjct: 434 ISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDV 490

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           +  D+G Y+C A N  G  ++ G L+V    +   Q P    +AA ++   RC+   ++ 
Sbjct: 491 TFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDT 549

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           L++   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + 
Sbjct: 550 LEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATA 605

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVS 827
           +  +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    
Sbjct: 606 RANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY 664

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
           E V            ++S    + PW+ Y F+VIA N++G   PS+ S    T  D P++
Sbjct: 665 EKV---------PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFK 715

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGI 946
            P  + G G +  +L ISW P+P  + NAPN +Y + W++      +++  + ++    I
Sbjct: 716 NPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNI 775

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVG 971
            +   P+   + +Y +KV AIND G
Sbjct: 776 VIADQPT---FVKYLIKVVAINDRG 797


>gi|24640619|ref|NP_727274.1| neuroglian, isoform B [Drosophila melanogaster]
 gi|281360615|ref|NP_001162705.1| neuroglian, isoform E [Drosophila melanogaster]
 gi|442615514|ref|NP_001259337.1| neuroglian, isoform I [Drosophila melanogaster]
 gi|14286138|sp|P20241.2|NRG_DROME RecName: Full=Neuroglian; Flags: Precursor
 gi|22831957|gb|AAN09236.1| neuroglian, isoform B [Drosophila melanogaster]
 gi|272506037|gb|ACZ95240.1| neuroglian, isoform E [Drosophila melanogaster]
 gi|440216538|gb|AGB95181.1| neuroglian, isoform I [Drosophila melanogaster]
          Length = 1302

 Score =  249 bits (635), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 215/805 (26%), Positives = 353/805 (43%), Gaps = 55/805 (6%)

Query: 188 RGPYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           R P   KQP   +++F +++++  +D    + C A G P P Y W K     D       
Sbjct: 27  RPPRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFD------W 80

Query: 244 DPLSDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
               ++     G G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + 
Sbjct: 81  QAYDNRMLRQPGRGTLVITIPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEA 139

Query: 303 APEIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSAL 358
           A  +        M  C  P  +P     W  ++     ++   + R+ +  +G L+FS +
Sbjct: 140 AKTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTLDPEGNLWFSNV 199

Query: 359 EQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPK 412
            + DA +   Y+C+  S      + G    L V     +  Q K P    +         
Sbjct: 200 TREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLAL 259

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRA 470
            G ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  
Sbjct: 260 RGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDV 319

Query: 471 SNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           SN     +S S+ +++ + P FT            ++ + C A GVP+   SW  NG+ +
Sbjct: 320 SNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPI 379

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
              T       R  + DN  TIR +N  + D   Y C A N L   Y    L V    P+
Sbjct: 380 EQST----PNPRRTVTDN--TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPT 433

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV 648
             + P    T   +G NVTI C    +PKP   W +  N + +GGR  +  NG+L I  V
Sbjct: 434 ISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDV 490

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           +  D+G Y+C A N  G  ++ G L+V    +   Q P    +AA ++   RC+   ++ 
Sbjct: 491 TFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDT 549

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           L++   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + 
Sbjct: 550 LEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATA 605

Query: 769 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVS 827
           +  +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    
Sbjct: 606 RANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY 664

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
           E V            ++S    + PW+ Y F+VIA N++G   PS+ S    T  D P++
Sbjct: 665 EKV---------PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFK 715

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGI 946
            P  + G G +  +L ISW P+P  + NAPN +Y + W++      +++  + ++    I
Sbjct: 716 NPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNI 775

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVG 971
            +   P+   + +Y +KV AIND G
Sbjct: 776 VIADQPT---FVKYLIKVVAINDRG 797


>gi|109474014|ref|XP_001077843.1| PREDICTED: cell adhesion molecule with homology to L1CAM [Rattus
           norvegicus]
          Length = 1225

 Score =  248 bits (634), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 220/803 (27%), Positives = 341/803 (42%), Gaps = 81/803 (10%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKR---FTLSGGNLIINDPRQVEDRG 270
           + C A G P P + W K+D   D         LSD R   F  SG   I N+      +G
Sbjct: 54  IECEAKGNPEPKFSWTKDDKPFD---------LSDPRIIAFNNSGTFRIPNEGHISHFQG 104

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYY 329
            Y C ASN+ G+ ISE ++     + +F  ++   I  +     +  C+PP  +P ++ Y
Sbjct: 105 KYRCFASNRLGTAISEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCNPPKGHPPLHIY 164

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPL 386
           W        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  K+    +  P    +
Sbjct: 165 WMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPKLRTIVQKMPMKLTV 223

Query: 387 KVFPHSN--FQQLKFPNNFPKTFPEAPK-----------------AGDKVRLECVAFGYP 427
               H+N      +  N         PK                  GD + LEC A G P
Sbjct: 224 NSLKHANDSSSSTEISNQANSIKQRKPKLLLPPAQIGSASSKTVLKGDTLLLECFAEGLP 283

Query: 428 VPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
            P   W++ GS LP+  A  E   + L I NV  +D+G Y C A+N          + ++
Sbjct: 284 TPQIEWSKLGSELPKGRATIEIHEKTLKIENVSYQDRGNYRCTANNLLGKASHDFHVIVE 343

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRY 542
             P +            ++    CEA G P  T  W  NG       LP+E+     D  
Sbjct: 344 EPPRWKKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNG-------LPIENHPFPGDVM 396

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAG 601
           F ++  ++   L P    A+YQC A N   T  ++A + V+ + P  + +  E+ ET  G
Sbjct: 397 FPRE--ISFTNLQPNHT-AVYQCEASNIHGTILANANIDVVDVVPLIQTKNEENYETVVG 453

Query: 602 EGGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
              +  + C   A+PK   VW+  D      GGR    ENG L I   + +D+G YSC  
Sbjct: 454 Y--SAFLHCEYFASPKATVVWEVADETHPLEGGRYHTHENGTLEIERTTEEDAGSYSCWV 511

Query: 661 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHN 718
            N  G       L + +  +     P    I     L+L C +  +  L   +   W+ +
Sbjct: 512 DNTMGKAVITANLDIRNA-TKLRVFPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKD 570

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           G      ++N  E   I IDG  L I+N S  D G Y C  ++ +   S KT V V G P
Sbjct: 571 GEA---FEMNGTEDGRIVIDGANLTISNISGEDQGIYSCSAQTALDSTSEKTQVTVLGVP 627

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVD 836
             P  + + E    S  + W  G  +   I+ Y +    N      W         +E+ 
Sbjct: 628 DPPRNLLLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKW---------EELT 678

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
           R  G +E  +   L P+  Y+F+V A NE+G    S PS  + TP   P + P  I    
Sbjct: 679 RVRG-EETDVVLPLAPYVRYQFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQA 737

Query: 897 GKIGDLSISWE-PLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 954
            +  ++ I W  PL   +QN P + Y++ W+ +    E++ ET+  +       +R+ + 
Sbjct: 738 SQPKEMIIKWGCPLKSMEQNGPGLEYRVSWKPQGAPEEWEEETVTNH------TLRVMTP 791

Query: 955 FYYTEYEVKVQAINDVGPGPESE 977
             Y  Y+V+VQAIN +G GPE +
Sbjct: 792 TVYAPYDVQVQAINQLGSGPEPQ 814



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 146/602 (24%), Positives = 230/602 (38%), Gaps = 88/602 (14%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   G P+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 365 LLCEAEGEPQPTIKWRVNGLPIENHPFPGDVMFPREISFTNLQPNHTAVYQCEASNIHGT 424

Query: 477 LESSVTISIQAEPNFTIPLTD-KHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLN 530
           + ++  I +       +PL   K+ +N   +        CE F  P  T  W      + 
Sbjct: 425 ILANANIDVVD----VVPLIQTKNEENYETVVGYSAFLHCEYFASPKATVVW-----EVA 475

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQL--RVLTLKPS 588
            ET PLE   RY   +N         E D   Y C   N +     +A L  R  T    
Sbjct: 476 DETHPLEG-GRYHTHENGTLEIERTTEEDAGSYSCWVDNTMGKAVITANLDIRNATKLRV 534

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEA----APKPKFVWKKDGNII---GSGGRRKIFENG 641
           F K P   +++  E     ++C  +         K  W KDG      G+   R + +  
Sbjct: 535 FPKNPRIPKSHVLE-----LYCESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDGA 589

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLR 700
           NL IS +S +D GIYSC+A         K ++ VL  P      PP+ + ++  +N  +R
Sbjct: 590 NLTISNISGEDQGIYSCSAQTALDSTSEKTQVTVLGVPD-----PPRNLLLSERQNRSVR 644

Query: 701 CS-----AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
            S      H  ++ +  YI    G R       EL      + G   ++     A    Y
Sbjct: 645 LSWEAGDDHNSKISE--YIVEFEGNREEPGKWEEL----TRVRGEETDVV-LPLAPYVRY 697

Query: 756 ECVVKST--VGKI-STKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWTDGATNGRPI 808
           +  V +   VGK  S++ +   E PP  P      ++V         I+W      G P+
Sbjct: 698 QFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQASQPKEMIIKW------GCPL 751

Query: 809 THYK-----IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP--WSTYEFKVI 861
              +     +  R +W        E    + V  +T R       V+ P  ++ Y+ +V 
Sbjct: 752 KSMEQNGPGLEYRVSWKPQ--GAPEEWEEETVTNHTLR-------VMTPTVYAPYDVQVQ 802

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAP--SRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           A N+LG G    P   Y+   D P  AP   R+      +  + ++W  +P+E  +    
Sbjct: 803 AINQLGSGPEPQPVTLYSG-EDYPSTAPVIHRVDVMNSTL--VKVTWSSIPKETVHGLLR 859

Query: 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPE 975
            Y+I W K           KE   +  +  R    +PS   ++E+ + V A N  G GPE
Sbjct: 860 GYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLEPFSEFHLTVLAYNSKGAGPE 919

Query: 976 SE 977
           SE
Sbjct: 920 SE 921


>gi|403309237|ref|XP_003945025.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 1171

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 225/866 (25%), Positives = 371/866 (42%), Gaps = 90/866 (10%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           ME LL      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   METLLPRRGVIISLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+D    +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDDNPFYFTDPRIITS----------NSSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  +    +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPRLLLPPTESGSESSITILKGETLLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C A+N        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTATNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P     +YQC A N   T  ++A + ++ ++P  +    + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-GVYQCEASNVHGTILANANINIVDVRPLIQTE--DEENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K        GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCKFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL----RCSAHTEELLDVAYI 714
              N  G       L + +  +     P    I     L+L    +C AH +  L ++  
Sbjct: 511 WVENSIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLS-- 567

Query: 715 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           W+ +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V
Sbjct: 568 WSKDGEA---FEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTV 624

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK- 833
              P  P  + + E    S  + W  G  +   I+ Y +          F  ++  +G+ 
Sbjct: 625 LDVPDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIV---------EFEGNKEELGRW 675

Query: 834 -EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
            E+ R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I
Sbjct: 676 EELTRVQGKKTTVILP-LAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNI 734

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRI 951
                +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+
Sbjct: 735 RVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRV 788

Query: 952 PSEFYYTEYEVKVQAINDVGPGPESE 977
            +   Y  Y+VKVQAIN +G GP+ +
Sbjct: 789 MTPAVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 140/595 (23%), Positives = 231/595 (38%), Gaps = 75/595 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++    G Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTGVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I+I  +    I   D+  +N A +        C+ F  P+   SW +       
Sbjct: 426 ILANANINI-VDVRPLIQTEDE--ENYATVVGYSAFLHCKFFASPEAIVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE +  +  ++  L I     E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EAKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVENSIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDAHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS ++ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 ---HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
              H   + +    +  N   +G  +    E   +      + +  A F    ++  +  
Sbjct: 651 GDDHNSNISEYIVEFEGNKEELGRWE----ELTRVQGKKTTVILPLAPFVRY-QFRVIAM 705

Query: 761 STVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKI 813
           + VG+   ++ +   E PP  P      ++V         I+W          P   Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765

Query: 814 IARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYG 869
                   TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G
Sbjct: 766 --------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG 810

Query: 870 EPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
               P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W 
Sbjct: 811 ----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWW 866

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 867 KTKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|426249269|ref|XP_004018372.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Ovis aries]
          Length = 1171

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 220/842 (26%), Positives = 365/842 (43%), Gaps = 86/842 (10%)

Query: 175 QYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           ++   ++ P  + + P  +KQ T  V F   +        + C A G P P + W K+D 
Sbjct: 20  KFSTAVDIPLSVQQVPTIVKQSTVQVAFPFDEY-----FQIECVAKGNPEPKFLWNKDDK 74

Query: 234 VQDRLVANLIDPLSDKRFTLS--GGNLII-NDPRQVEDRGSYHCKASNKFGSIISESVQL 290
             +         LSD R  +S  GG   I ND      +G Y C ASNK G  +SE ++ 
Sbjct: 75  PFN---------LSDPRIIVSNNGGTFRIPNDGHISHFQGKYRCFASNKLGIAMSEEIEF 125

Query: 291 AFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +F  ++   +  +     +  C+PP   P ++ YW        +++D+RV++S 
Sbjct: 126 IVPNTPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWMNIEL-EHIKQDERVYMSQ 184

Query: 350 DGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPLKVFPH-----SNFQQLKFPN 401
            G LYF+ +E+ D+ N  C   +  ++    +  P    +    H     S+ + +   N
Sbjct: 185 KGDLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHVNDSSSSTENISKAN 244

Query: 402 NF----PKTFPEAPKAG----------DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
           +     P+     P++G          D + LEC A G P P   W + G  LP+    +
Sbjct: 245 SIKQRKPRLLLPPPESGSESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESK 304

Query: 448 NFN-RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           N +   L I NV  ED+G Y C A+N   +      ++++  P +T           +  
Sbjct: 305 NNSVDTLKIENVSYEDKGNYRCTANNFLGSATHEFHVTVEEPPRWTKKPQSGVYSTGSSG 364

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAM 562
              CEA G P+ T  W  NG       LP+E   R     +V++   I + N + +  A+
Sbjct: 365 ILLCEAEGRPEPTIKWRVNG-------LPIE---RNPFSGDVISPGEISFTNVQPNHTAV 414

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFV 621
           YQC A N   T  ++A + V+ ++P  +    + E YA   G +  + C   A+P+    
Sbjct: 415 YQCEASNVHGTILANANIDVVDVRPLIQTA--DEENYATVVGYSAFLHCEFFASPEAIVS 472

Query: 622 WKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           W+K +      G R  + ENG L I+  + +D+G YSC   N  G       L + +  +
Sbjct: 473 WQKVEEAKPLDGSRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNA-T 531

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINID 738
                P    +     L+L C +  +  L   +   W+ +G      ++N  +   I ID
Sbjct: 532 NLRVSPKNPRVPKSHTLELHCESKCDSHLKYSLKLSWSKDGEA---FEINGTDDGRIIID 588

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
           G  L I+N +  D G Y C   + +  I+  T V V   P  P  + + E    S  + W
Sbjct: 589 GANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLDVPDPPENLHLSERQNRSVRLTW 648

Query: 799 TDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
             G  +   I+ Y +    N      W         +E+ R  G KE ++   L P+  Y
Sbjct: 649 EAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRY 698

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA NE+G  +PS PS  + TP   P + P  I     +  ++ I WEPL   +QN 
Sbjct: 699 QFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNG 758

Query: 917 PNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           P + Y++ W+ +    E++ ET+  +       +R+ +   Y  Y+V+VQAIN +G GPE
Sbjct: 759 PGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPE 812

Query: 976 SE 977
            +
Sbjct: 813 PQ 814


>gi|345307130|ref|XP_001507406.2| PREDICTED: neurofascin [Ornithorhynchus anatinus]
          Length = 1371

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 222/809 (27%), Positives = 355/809 (43%), Gaps = 90/809 (11%)

Query: 210  NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPR 264
            ++I + C A G P PS+ W +         +   +   D R T+    G L+I+     R
Sbjct: 250  DNIFIECEAKGNPFPSFLWTRN--------SKFFNIAKDPRVTMQRRSGTLVIDFRSGGR 301

Query: 265  QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA-PEIGNQNWGKAMFCDPPTNY 323
              E  G Y C A N  G+ +S  ++L       +  +   P +  +     + C+PP   
Sbjct: 302  PEEYEGEYQCSARNNLGTALSNKIRLQVSKSPLWPKESLDPVVVQEGNPLTLQCNPPPGL 361

Query: 324  PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
            P    +W        V+ DKRV    +G LYFS  + Q    +YSCN +   + T +   
Sbjct: 362  PSPVIFWMSSSMDPIVQ-DKRVSQGQNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKN 420

Query: 383  FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPL 440
             F LKV       +       P+    +     G  + LEC+A G P P   W ++G  L
Sbjct: 421  PFTLKVLTTRGVAERTPSFMHPQGTSSSQMVLRGTDLLLECIASGVPAPDIAWHKKGGDL 480

Query: 441  PR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 499
            P     FENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  
Sbjct: 481  PAGKVKFENFNKALRIINVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLI 540

Query: 500  MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
            +    D    C A G P  T  W  NGE L + +    +  R    D V+        RD
Sbjct: 541  LAPGEDGRVVCRANGNPKPTVQWLVNGEPLEAAS---PNPSREVAGDTVIF-------RD 590

Query: 560  -----PAMYQCRAKNQLKTRYSSAQLRVLTLKPS--FKKRPLESETYAGEGGNVTIFCNP 612
                  A+YQC A N+     ++A + VL + P   F +  L    +        + C  
Sbjct: 591  TQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRMLFPRNQLIKVIHLNR---TRLDCPF 647

Query: 613  EAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
              +P P   W K+G   GS   GG  ++FENG+L I+   ++D GIY+C ATN+ G  E+
Sbjct: 648  FGSPIPTLRWFKNGQ--GSNLDGGNYRVFENGSLEITMTRKEDQGIYTCVATNILGKAEN 705

Query: 670  KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDL 727
            + RL V   P+   Q+P          ++L C    +  L ++  W  +   + IGN   
Sbjct: 706  QVRLEV-KDPTRIVQVPEDQMAKKGATVRLECHVKHDPSLKLSIKWLKDNEPLYIGNRLK 764

Query: 728  NELETPNINIDGGLLEITNASFADAGEYEC---------VVKSTVGKISTKT------TV 772
             E E          L I   +  D G Y C         V K+ +  ++T++       V
Sbjct: 765  KEDEA---------LTILGVAERDEGLYACEASTELDRAVAKAYLTVLATQSVPTNRMAV 815

Query: 773  IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHV 830
            + +  P  P  +++ ++ + S  + W  G  N  PIT Y +    +      W N+S   
Sbjct: 816  LPKERPERPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDQFQPGRWHNLS--- 872

Query: 831  IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
                  +++G   +++   L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS
Sbjct: 873  ------KFSGSINSAVLK-LSPYVNYQFRVIAINEVGSSLPSLPSERYRTSGAPPEANPS 925

Query: 891  RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVV 949
             + G G +  ++ ISW P+   +   PN+ Y + WR+++  E + + T+K  GN  + V 
Sbjct: 926  DVQGVGSRKNNMEISWTPMNATQAYGPNLRYIVKWRRRDTRESWSNATVK--GNRYV-VW 982

Query: 950  RIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            + P    Y  Y+++VQ+ ND G GP+ + 
Sbjct: 983  QTP---VYVPYDIRVQSENDFGKGPDPDT 1008



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 135/327 (41%), Gaps = 32/327 (9%)

Query: 472 NDRSALESSVTI-SIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           N ++   SS +I ++   P  T   + D  +D + ++   CEA G P  ++ W RN +  
Sbjct: 216 NQKALARSSTSIPTVLQPPTITKQSVKDYIVDPRDNIFIECEAKGNPFPSFLWTRNSKFF 275

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLN---PERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           N    P     R   +   L I + +   PE     YQC A+N L T  S+     ++  
Sbjct: 276 NIAKDPRVTMQR---RSGTLVIDFRSGGRPEEYEGEYQCSARNNLGTALSNKIRLQVSKS 332

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLL 644
           P + K  L+      EG  +T+ CNP    P P   W     + I    R    +NG+L 
Sbjct: 333 PLWPKESLDP-VVVQEGNPLTLQCNPPPGLPSPVIFWMSSSMDPIVQDKRVSQGQNGDLY 391

Query: 645 ISPVSRDDSGI-YSCTAT--NVHGMDESKG-RLIVLHGPSYYEQLP----PKITIAAHR- 695
            S V   D+   YSC A     H + +     L VL      E+ P    P+ T ++   
Sbjct: 392 FSNVMLQDTQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMHPQGTSSSQMV 451

Query: 696 ----NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 751
               +L L C A      D+A  W   G   G++   +++  N N     L I N S  D
Sbjct: 452 LRGTDLLLECIASGVPAPDIA--WHKKG---GDLPAGKVKFENFN---KALRIINVSEED 503

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPP 778
           +GEY C+  + +G I    +V V+  P
Sbjct: 504 SGEYFCLASNKMGSIRHTISVRVKAAP 530


>gi|403309235|ref|XP_003945024.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1225

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 225/866 (25%), Positives = 371/866 (42%), Gaps = 90/866 (10%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           ME LL      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   METLLPRRGVIISLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+D    +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDDNPFYFTDPRIITS----------NSSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  +    +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPRLLLPPTESGSESSITILKGETLLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C A+N        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTATNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P     +YQC A N   T  ++A + ++ ++P  +    + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-GVYQCEASNVHGTILANANINIVDVRPLIQTE--DEENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K        GRR  I+ENG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCKFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL----RCSAHTEELLDVAYI 714
              N  G       L + +  +     P    I     L+L    +C AH +  L ++  
Sbjct: 511 WVENSIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLS-- 567

Query: 715 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           W+ +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V
Sbjct: 568 WSKDGEA---FEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTV 624

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK- 833
              P  P  + + E    S  + W  G  +   I+ Y +          F  ++  +G+ 
Sbjct: 625 LDVPDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIV---------EFEGNKEELGRW 675

Query: 834 -EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
            E+ R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I
Sbjct: 676 EELTRVQGKKTTVILP-LAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNI 734

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRI 951
                +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+
Sbjct: 735 RVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRV 788

Query: 952 PSEFYYTEYEVKVQAINDVGPGPESE 977
            +   Y  Y+VKVQAIN +G GP+ +
Sbjct: 789 MTPAVYAPYDVKVQAINQLGSGPDPQ 814



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 142/595 (23%), Positives = 231/595 (38%), Gaps = 75/595 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++    G Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTGVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + ++  I+I  +    I   D+  +N A +        C+ F  P+   SW +       
Sbjct: 426 ILANANINI-VDVRPLIQTEDE--ENYATVVGYSAFLHCKFFASPEAIVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           E  PLE + RY I +N         E D   Y C  +N +     +A L +     L + 
Sbjct: 478 EAKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVENSIGKTAVTANLDIRNATKLRVS 536

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFENGNL 643
           P   K P   + +  E  +    C+       K  W KDG    I G+   R I +  NL
Sbjct: 537 P---KNPRIPKLHMLEL-HCESKCDAHLKHSLKLSWSKDGEAFEINGTEDGRIIIDGANL 592

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS ++ +D GIY C+A           ++ VL  P   E L   ++   +R+++L   A
Sbjct: 593 TISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENL--HLSERQNRSVRLTWEA 650

Query: 704 ---HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
              H   + +    +  N   +G  +    E   +      + +  A F    ++  +  
Sbjct: 651 GDDHNSNISEYIVEFEGNKEELGRWE----ELTRVQGKKTTVILPLAPFVRY-QFRVIAM 705

Query: 761 STVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKI 813
           + VG+   ++ +   E PP  P      ++V         I+W          P   Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765

Query: 814 IARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYG 869
                   TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG G
Sbjct: 766 --------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLGSG 810

Query: 870 EPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
               P PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I W 
Sbjct: 811 ----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWW 866

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 867 KTKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|6760653|gb|AAC28613.2| neuroglian [Drosophila melanogaster]
          Length = 1239

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 215/804 (26%), Positives = 352/804 (43%), Gaps = 53/804 (6%)

Query: 188 RGPYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           R P   KQP   +++F +++++  +D    + C A G P P Y W K     D    +  
Sbjct: 27  RPPRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDKP 86

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
                 R     G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + A
Sbjct: 87  MLRQPGR-----GTLVITIPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAA 140

Query: 304 PEIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSALE 359
             +        M  C  P  +P     W  ++     ++   + R+ +  +G L+FS + 
Sbjct: 141 KTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTLDPEGNLWFSNVT 200

Query: 360 QIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPKA 413
           + DA +   Y+C+  S      + G    L V     +  Q K P    +          
Sbjct: 201 REDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALR 260

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRAS 471
           G ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  S
Sbjct: 261 GKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVS 320

Query: 472 NDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
           N     +S S+ +++ + P FT            ++ + C A GVP+   SW  NG+ + 
Sbjct: 321 NGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIE 380

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
             T       R  + DN  TIR +N  + D   Y C A N L   Y    L V    P+ 
Sbjct: 381 QST----PNPRRTVTDN--TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTI 434

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
            + P    T   +G NVTI C    +PKP   W +  N + +GGR  +  NG+L I  V+
Sbjct: 435 SEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVT 491

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C A N  G  ++ G L+V    +   Q P    +AA ++   RC+   ++ L
Sbjct: 492 FSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTL 550

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769
           ++   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + +
Sbjct: 551 EIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATAR 606

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSE 828
             +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    E
Sbjct: 607 ANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYE 665

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
            V            ++S    + PW+ Y F+VIA N++G   PS+ S    T  D P++ 
Sbjct: 666 KV---------PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKN 716

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIA 947
           P  + G G +  +L ISW P+P  + NAPN +Y + W++      +++  + ++    I 
Sbjct: 717 PDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIV 776

Query: 948 VVRIPSEFYYTEYEVKVQAINDVG 971
           +   P+   + +Y +KV AIND G
Sbjct: 777 IADQPT---FVKYLIKVVAINDRG 797


>gi|402859573|ref|XP_003894227.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
           [Papio anubis]
          Length = 1171

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 224/861 (26%), Positives = 365/861 (42%), Gaps = 86/861 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEP L      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPRLNGRRLIISLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDGNPFYFTDHRIITS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  +SA + V+ ++P  + +  + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILASANVDVVDVRPLIQTK--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K        GRR  +++NG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKE 834
            P  P  + + E    S  + W  G  +   I+ Y +    N      W         +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGP 974
              Y  Y+VKVQAIN +G GP
Sbjct: 791 PAVYAPYDVKVQAINQLGSGP 811



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 228/597 (38%), Gaps = 79/597 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + +S  + +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILASANVDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA--------QLRVL 583
           E  PLE + RY + DN         E D   Y C  +N +     +A        QLRV 
Sbjct: 478 EAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRVS 536

Query: 584 TLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFE 639
              P   K   LE    +         C+       K  W KDG    I G+   R I +
Sbjct: 537 PKNPRIPKLHMLELHCESK--------CDLHLKHSLKLSWSKDGEAFEINGTEDGRIIID 588

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
             NL IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L
Sbjct: 589 GANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRL 646

Query: 700 RCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
              A  +   +++ YI    G +       EL          +L +  A F    ++  +
Sbjct: 647 SWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVI 703

Query: 759 VKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHY 811
             + VG+   ++ +   E PP  P      ++V         I+W          P   Y
Sbjct: 704 AVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 763

Query: 812 KIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELG 867
           ++        TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG
Sbjct: 764 RV--------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLG 808

Query: 868 YGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            G    P+PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I 
Sbjct: 809 SG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQIN 864

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           W K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 865 WWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|6760654|gb|AAC28614.2| neuroglian [Drosophila melanogaster]
          Length = 1302

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 215/804 (26%), Positives = 352/804 (43%), Gaps = 53/804 (6%)

Query: 188 RGPYFIKQPT--DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           R P   KQP   +++F +++++  +D    + C A G P P Y W K     D    +  
Sbjct: 27  RPPRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDKP 86

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
                 R     G L+I  P+  EDRG Y C ASN+FG+  S SV +    +  F  + A
Sbjct: 87  MLRQPGR-----GTLVITIPKD-EDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAA 140

Query: 304 PEIGNQNWGKAMF-CDPPTNYPGVNYYWA-RDYFPNFVEE--DKRVFVSYDGALYFSALE 359
             +        M  C  P  +P     W  ++     ++   + R+ +  +G L+FS + 
Sbjct: 141 KTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTLDPEGNLWFSNVT 200

Query: 360 QIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPKA 413
           + DA +   Y+C+  S      + G    L V     +  Q K P    +          
Sbjct: 201 REDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALR 260

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRAS 471
           G ++ L C+  G P+P   W++ G  +  +      ++ + L I     +D G Y C  S
Sbjct: 261 GKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVS 320

Query: 472 NDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
           N     +S S+ +++ + P FT            ++ + C A GVP+   SW  NG+ + 
Sbjct: 321 NGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIE 380

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
             T       R  + DN  TIR +N  + D   Y C A N L   Y    L V    P+ 
Sbjct: 381 QST----PNPRRTVTDN--TIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTI 434

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
            + P    T   +G NVTI C    +PKP   W +  N + +GGR  +  NG+L I  V+
Sbjct: 435 SEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVT 491

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C A N  G  ++ G L+V    +   Q P    +AA ++   RC+   ++ L
Sbjct: 492 FSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTL 550

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769
           ++   W  +G  I   D  E +   +  +   L I      D+GEY CV ++ + + + +
Sbjct: 551 EIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATAR 606

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSE 828
             +IV+  P  P  +  +      A I W     N  PI HY I   T++  ++W    E
Sbjct: 607 ANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYE 665

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
            V            ++S    + PW+ Y F+VIA N++G   PS+ S    T  D P++ 
Sbjct: 666 KV---------PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKN 716

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIA 947
           P  + G G +  +L ISW P+P  + NAPN +Y + W++      +++  + ++    I 
Sbjct: 717 PDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIV 776

Query: 948 VVRIPSEFYYTEYEVKVQAINDVG 971
           +   P+   + +Y +KV AIND G
Sbjct: 777 IADQPT---FVKYLIKVVAINDRG 797


>gi|193697717|ref|XP_001944384.1| PREDICTED: neuroglian-like [Acyrthosiphon pisum]
          Length = 1247

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 218/783 (27%), Positives = 336/783 (42%), Gaps = 68/783 (8%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGS 271
           + C A G P P Y W K          N      D R       G+L I +PR  ED G 
Sbjct: 58  IDCEAEGEPAPKYRWMKNG-------KNFDWQAYDDRIAQQPGRGSLTITEPRD-EDLGQ 109

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEI---GNQNWGKAMFCDPPTNYPGVNY 328
           Y C A N +G+  S+SV +    +  F  K  P++     +     + C PPT +P  N 
Sbjct: 110 YQCFAENAWGTATSKSVMVVKAELNSF--KDEPKVYVEAQEGDPFKLVCHPPTGWPKPNV 167

Query: 329 YWA---RDYFPNFVEEDKRVFVSYDGALYFSAL---EQIDAGNYSCNVQSKVSDTGRNGP 382
           YW    +D     V  + R+ +  +G L+FS +   +  D   Y C  +S      + G 
Sbjct: 168 YWLIRNKDGGLTTVN-NTRMTLDPEGNLWFSNVTRHDTSDGSTYFCYAESLTMSEYKLGN 226

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFP------EAPKAGDKVRLECVAFGYPVPSYNWTRR 436
              L V   +   +    N +P T        E      KV L C+  G P+P   W + 
Sbjct: 227 PVNLNVIQTA---ETALQNKYPPTQQYVTRRNEVALLDKKVELFCIYGGTPLPETVWLKD 283

Query: 437 GSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASNDRSALES-SVTISIQAEPNFTI 493
           G P+  N      N+ + L I  VK ED+G+Y C  SN   + +S ++ + + A P FT+
Sbjct: 284 GLPIQSNERVSQGNYGKSLIIKKVKFEDKGKYTCEVSNGVGSPQSYNIELDVMAMPFFTV 343

Query: 494 -PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR 552
            P   +  + +  +   CEA G P+ T  W  NG  L+   +      R  +  N +TI 
Sbjct: 344 VPQIVEGAEGETAVI-KCEASGNPEPTIKWIHNGRPLSEAPI----NPRRSVTSNTITIT 398

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            L  + D   Y C A N +   Y    + VL L P   + P + ET  G    +TI C  
Sbjct: 399 SL-IKNDTGNYGCNATNSIGYVYKDVYINVLALAPEITEPPNKVETVDGRA--ITIGCKN 455

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
              PKP   W ++ NI  +GGR    + G+L IS V   D+G Y+C ATN +G   + G 
Sbjct: 456 FGVPKPHVKWTRN-NIELTGGRYTTLDTGDLQISEVGFTDAGNYTCIATNNYGSANASGT 514

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 732
           L +    +     P    + A       C+A ++  L +   W      I N D    E 
Sbjct: 515 LTIKEH-TRITAAPEDYEVVAGSVATFHCTATSDRSLHLNMEWLARDEPI-NFDT---EP 569

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 792
             +  +   + IT     D+G Y C+ ++ + + +    +IV+  P  P  + +   +K 
Sbjct: 570 RFVKTNDYSMTITKTIELDSGMYTCLARTELDQATASAMLIVQDKPNPPQLLGIT-CNKR 628

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLV 851
            A ++W     N  PI  Y I   T++   TW   S++V             AS +  +V
Sbjct: 629 DAAVKWQPKGDNRAPILRYTIEYNTSFAPDTWSVASDNV------------PASGQTYIV 676

Query: 852 P---WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
           P   W+ + F+VIA N++G   PS  S    T  D PY+ P  +   G    +L ISW P
Sbjct: 677 PMTPWANFTFRVIAMNKIGRSNPSLHSSVCTTQPDVPYKNPENVEAAGTTPSNLVISWTP 736

Query: 909 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 968
           +P+ + NAP + Y+++W  K D   Q    +E  +  +  + I ++  Y  Y+VKV A N
Sbjct: 737 MPKIEHNAPGLRYRVYW--KQDIPGQVWNSEEITDYTVKELVIDNQPTYQRYKVKVVASN 794

Query: 969 DVG 971
           + G
Sbjct: 795 EKG 797



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 151/377 (40%), Gaps = 35/377 (9%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           + L C  GG P P   W K     D L     + +S   +   G +LII   +  ED+G 
Sbjct: 264 VELFCIYGGTPLPETVWLK-----DGLPIQSNERVSQGNY---GKSLIIKKVK-FEDKGK 314

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEI--GNQNWGKAMFCDPPTNYPGVNYY 329
           Y C+ SN  GS  S +++L    +  F +   P+I  G +     + C+   N P     
Sbjct: 315 YTCEVSNGVGSPQSYNIELDVMAMPFFTV--VPQIVEGAEGETAVIKCEASGN-PEPTIK 371

Query: 330 WARDYFP-NFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
           W  +  P +    + R  V+ +  +  ++L + D GNY CN  + +    ++     L +
Sbjct: 372 WIHNGRPLSEAPINPRRSVTSN-TITITSLIKNDTGNYGCNATNSIGYVYKDVYINVLAL 430

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN 448
            P     ++  P N  +T       G  + + C  FG P P   WTR    L    Y   
Sbjct: 431 AP-----EITEPPNKVETV-----DGRAITIGCKNFGVPKPHVKWTRNNIELTGGRYTTL 480

Query: 449 FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTW 508
               L I  V   D G Y C A+N+  +  +S T++I+     T    D  +   +  T+
Sbjct: 481 DTGDLQISEVGFTDAGNYTCIATNNYGSANASGTLTIKEHTRITAAPEDYEVVAGSVATF 540

Query: 509 TCEAFG--VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQC 565
            C A       +   W    E +N +T P       F++ N  ++      E D  MY C
Sbjct: 541 HCTATSDRSLHLNMEWLARDEPINFDTEP------RFVKTNDYSMTITKTIELDSGMYTC 594

Query: 566 RAKNQLKTRYSSAQLRV 582
            A+ +L    +SA L V
Sbjct: 595 LARTELDQATASAMLIV 611


>gi|402859571|ref|XP_003894226.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
           [Papio anubis]
          Length = 1225

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 224/861 (26%), Positives = 365/861 (42%), Gaps = 86/861 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEP L      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPRLNGRRLIISLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKED----YVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDGNPFYFTDHRIITS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  +SA + V+ ++P  + +  + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILASANVDVVDVRPLIQTK--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K        GRR  +++NG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKE 834
            P  P  + + E    S  + W  G  +   I+ Y +    N      W         +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGP 974
              Y  Y+VKVQAIN +G GP
Sbjct: 791 PAVYAPYDVKVQAINQLGSGP 811



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 228/597 (38%), Gaps = 79/597 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + +S  + +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILASANVDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA--------QLRVL 583
           E  PLE + RY + DN         E D   Y C  +N +     +A        QLRV 
Sbjct: 478 EAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRVS 536

Query: 584 TLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFE 639
              P   K   LE    +         C+       K  W KDG    I G+   R I +
Sbjct: 537 PKNPRIPKLHMLELHCESK--------CDLHLKHSLKLSWSKDGEAFEINGTEDGRIIID 588

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
             NL IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L
Sbjct: 589 GANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRL 646

Query: 700 RCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
              A  +   +++ YI    G +       EL          +L +  A F    ++  +
Sbjct: 647 SWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVI 703

Query: 759 VKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHY 811
             + VG+   ++ +   E PP  P      ++V         I+W          P   Y
Sbjct: 704 AVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 763

Query: 812 KIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELG 867
           ++        TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG
Sbjct: 764 RV--------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLG 808

Query: 868 YGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            G    P+PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I 
Sbjct: 809 SG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQIN 864

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           W K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 865 WWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|380808946|gb|AFE76348.1| neural cell adhesion molecule L1-like protein precursor [Macaca
           mulatta]
          Length = 1225

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 224/861 (26%), Positives = 365/861 (42%), Gaps = 86/861 (9%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP-TDVVFDLSKRSI 208
           MEP L      I  + +LL      ++   IE P  + + P  IKQ    V F   +   
Sbjct: 1   MEPRLNGKGLIISLIFFLL------KFSTAIEIPPSVQQVPTIIKQSKVQVAFPFDEY-- 52

Query: 209 LNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR 264
                + C A G P P++ W K+     +   R++ +            SG   I N+  
Sbjct: 53  ---FQIECEAKGNPEPTFTWTKDGNPFHFTDHRIITS----------NNSGTFRIPNEGH 99

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNY 323
               +G Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   
Sbjct: 100 ISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGL 159

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNG 381
           P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  ++    +  
Sbjct: 160 PPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKM 218

Query: 382 PF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLEC 421
           P    +    H+N               +Q K     P T   +  +     G+ + LEC
Sbjct: 219 PMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLEC 278

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
            A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C ASN        
Sbjct: 279 FAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHD 338

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             + ++  P +T           ++    CEA G P  T  W  NG  +++        D
Sbjct: 339 FHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GD 395

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             F ++  ++   L P    A+YQC A N   T  +SA + V+ ++P  + +  + E YA
Sbjct: 396 VVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILASANVDVVDVRPLIQTK--DGENYA 450

Query: 601 GEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC 658
              G +  + C   A+P+    W+K        GRR  +++NG L I+  + +D+G YSC
Sbjct: 451 TVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSC 510

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 716
              N  G       L + +  +     P    I     L+L C +  +  L   +   W+
Sbjct: 511 WVENAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWS 569

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +G      ++N  E   I IDG  L I+N +  D G Y C   + +   +  T V V  
Sbjct: 570 KDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 626

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKE 834
            P  P  + + E    S  + W  G  +   I+ Y +    N      W         +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EE 677

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           + R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I  
Sbjct: 678 LTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRV 736

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 953
              +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790

Query: 954 EFYYTEYEVKVQAINDVGPGP 974
              Y  Y+VKVQAIN +G GP
Sbjct: 791 PAVYAPYDVKVQAINQLGSGP 811



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 228/597 (38%), Gaps = 79/597 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + +S  + +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILASANVDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA--------QLRVL 583
           E  PLE + RY + DN         E D   Y C  +N +     +A        QLRV 
Sbjct: 478 EAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRVS 536

Query: 584 TLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFE 639
              P   K   LE    +         C+       K  W KDG    I G+   R I +
Sbjct: 537 PKNPRIPKLHMLELHCESK--------CDLHLKHSLKLSWSKDGEAFEINGTEDGRIIID 588

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
             NL IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L
Sbjct: 589 GANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRL 646

Query: 700 RCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
              A  +   +++ YI    G +       EL          +L +  A F    ++  +
Sbjct: 647 SWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVI 703

Query: 759 VKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT--DGATNGRPITHY 811
             + VG+   ++ +   E PP  P      ++V         I+W          P   Y
Sbjct: 704 AVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 763

Query: 812 KIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELG 867
           ++        TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG
Sbjct: 764 RV--------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLG 808

Query: 868 YGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            G    P+PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I 
Sbjct: 809 SG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQIN 864

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           W K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 865 WWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|327272948|ref|XP_003221246.1| PREDICTED: neuronal cell adhesion molecule-like [Anolis
           carolinensis]
          Length = 1270

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 230/852 (26%), Positives = 358/852 (42%), Gaps = 67/852 (7%)

Query: 150 MEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQ-PTDVVFDLSKRSI 208
           ME    I E  I  L  L          +D +  +++P+ P  I+Q P D + D  +   
Sbjct: 1   MEKASSISETRIHLLLVLCQIITALDVPLDPKLLEELPQPPTIIQQSPKDYIIDPRE--- 57

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN------D 262
             +I + C A G P PS+ W +     D      ID  +  R     G LIIN       
Sbjct: 58  --NIVIQCEAKGKPPPSFSWTRNGTHFD------IDKDARVRMKPHSGTLIINIINEENG 109

Query: 263 PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCDPPT 321
            +     G Y C A N+ G+ IS ++ +       +  ++  P++  +     + C PP 
Sbjct: 110 GKAESYEGVYQCTARNELGAAISNNIVIRSSRSPLWTKEKLVPKVVTEGQYVVLPCRPPV 169

Query: 322 NYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRN 380
             P    +W  + F     +++RV  S +G LYFS +   D   +Y C  +   + T + 
Sbjct: 170 GLPPPIIFWMDNSFQKL-PQNERVSQSLNGDLYFSNVIPEDTREDYICYARFNHTQTIQQ 228

Query: 381 GPFFPLKVFPHSNFQQLKFPNNFP--KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS 438
                LKV P   +Q+ +     P   T  +    G+ + LEC+A G P P+  W + G 
Sbjct: 229 KQPISLKVEPARLYQERRPTILTPGGSTSTKTELRGNTLLLECIAEGLPTPTIRWIKEGG 288

Query: 439 PLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD 497
            LP N  +FENFN+ L I ++   D G+Y C ASN   +    +T++I+A P +    T+
Sbjct: 289 ELPVNRKFFENFNKTLKITDISEADSGKYKCMASNLLGSAHHVITVTIKAAPYWIREPTN 348

Query: 498 KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 557
                  D +  C A G P  + SW  NG  +    +  ED  R    D ++       E
Sbjct: 349 LVFSPGEDGSLICRANGKPKPSISWLANGVPI---AIAPEDPSRKVDGDTIIFTDVQ--E 403

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 617
           R  A+YQC A N+     ++A + VL   P     PL +           + C    +P 
Sbjct: 404 RSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PLNTLYQVIANKPALLDCAFFGSPV 462

Query: 618 PKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           P+  W K   G+I+  G +    +NG L I    ++  G Y+C A N  G  ++  +L +
Sbjct: 463 PEIEWFKGVKGSIL-QGNQYIFHKNGTLEIPVAKKNSGGTYTCVARNKLGKVQNDVQLQI 521

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735
              P+   + P    +     +   C    +  L     W      + N +         
Sbjct: 522 KE-PTVIIKEPEYKVVQRTGQVSFECIIKHDTTLIPTVTWLKENNELPNDE-------RF 573

Query: 736 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV----------Q 785
            +    L I N +  D G Y C+  +T+  +S    + V  PP  P  V          +
Sbjct: 574 MVGKNNLTIMNVTDKDGGAYTCIANTTLDSVSASAVLTVVAPPTAPPVVYDRPDPPFDLE 633

Query: 786 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST-WFNVSEHVIGKEVDRYTGRKEA 844
           + +  + S  + W  G  N  PIT + I           +N    V G  +   T  K  
Sbjct: 634 LTDHLERSVQLTWIPGNDNNSPITKFIIEYEDAMREPGIWNYQTEVNG--ILTTTQLK-- 689

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
                L P+  Y F+VIA N++G  +PS  S QY T A KP   P+ + G G +  +L I
Sbjct: 690 -----LSPYVNYSFRVIAINDIGRSQPSEASEQYFTKAAKPDDNPTDVQGIGSEPDNLVI 744

Query: 905 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
            WEPL + + N P + YK+ WR+K+ D E+ S  +    NV   +V     F  T YE+K
Sbjct: 745 MWEPLKQFQSNGPGLQYKVSWRQKDGDDEWTSVIV---ANVSRYIVSGTPTF--TPYEIK 799

Query: 964 VQAINDVGPGPE 975
           VQ +ND+GP PE
Sbjct: 800 VQGLNDLGPAPE 811



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG +QV  V+ T A +QW         G   G  I ++K+ + +        + +H I K
Sbjct: 828 PGNLQVQVVNSTLAKVQWDPVAQKYIRGHLQGYKIYYWKVKSLSG------RIKKH-IEK 880

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           +   ++G K   +   L P+S+Y+  V   N  G G P SP   + TP   P  APS + 
Sbjct: 881 KTLTFSGNKTHGMVPGLEPYSSYKLNVRVLNGKGEG-PPSPDEAFKTPEGVP-SAPSFLK 938

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W P
Sbjct: 939 ITNPNLDSLTLEWGP 953


>gi|26333963|dbj|BAC30699.1| unnamed protein product [Mus musculus]
          Length = 1150

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 215/797 (26%), Positives = 334/797 (41%), Gaps = 70/797 (8%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRG 270
           + C A G P P + W K+D   D         LSD R      SG   I N+      +G
Sbjct: 55  IECEAKGNPEPIFSWTKDDKPFD---------LSDPRIIAANNSGTFKIPNEGHISHFQG 105

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYY 329
            Y C ASN+ G+ +SE ++     + +F  ++   I  +     +  C+PP   P ++ Y
Sbjct: 106 KYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCNPPKGLPPLHIY 165

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPL 386
           W        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  K+    +  P    +
Sbjct: 166 WMNIEL-EHIEQDERVYMSQRGDLYFANVEENDSRNDYCCFAAFPKLRTIVQKMPMKLTV 224

Query: 387 KVFPH-----SNFQQLKFPNNFPKTFPEA--PKA------------GDKVRLECVAFGYP 427
               H     S+ +     N+  +  P+   P A            GD + LEC A G P
Sbjct: 225 NSLKHASDSSSSTEICSQANSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAEGLP 284

Query: 428 VPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
            P   W++ GS LP   A  E   + L I N+  +D+G Y C A+N          ++++
Sbjct: 285 TPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVE 344

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
             P +            +     CEA G P  T  W  NG  +     P +     F+  
Sbjct: 345 EPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIKWRLNGLPIEKHPFPGD-----FMFP 399

Query: 547 NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-N 605
             ++   L P     +YQC A N   T  ++A + V+ + P  K +    E YA   G +
Sbjct: 400 REISFTNLLPNHT-GVYQCEASNIHGTILANANIDVIDVIPLIKTK--NEENYATVVGYS 456

Query: 606 VTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
             + C   A+PK   VW+  D      G R    ENG L I   + +D+G YSC   N  
Sbjct: 457 AFLHCEYFASPKATVVWEVADETHPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAM 516

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRI 722
           G       L + +  +     P    I     L+L C +  +  L   +   W+ +G   
Sbjct: 517 GKAVITANLDIRNA-TKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDG--- 572

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
              ++N  E   I IDG  L I+N +  D G Y C  ++++   S KT V V G P  PG
Sbjct: 573 EAFEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPDPPG 632

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTG 840
            + + E    S  + W  G  +   I+ Y +    N      W         +E+ R  G
Sbjct: 633 NLHLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKW---------EELTRVQG 683

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
            +E  +   L P+  Y+F+V A NE+G    S PS  + TP   P + P  I     +  
Sbjct: 684 -EETDVVLSLAPYVRYQFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPK 742

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           ++ I WEPL   +QN P + YK+ W+ +   E   E +     V    +R+ +   Y  Y
Sbjct: 743 EMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEEI-----VTNHTLRVMTPTVYAPY 797

Query: 961 EVKVQAINDVGPGPESE 977
           +VKVQAIN +G  P+ +
Sbjct: 798 DVKVQAINQLGSSPDPQ 814



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 143/596 (23%), Positives = 220/596 (36%), Gaps = 77/596 (12%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFN--RILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   G P+ ++ +  +F   R ++  N+     G Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRLNGLPIEKHPFPGDFMFPREISFTNLLPNHTGVYQCEASNIHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTD-KHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLN 530
           + ++  I +       IPL   K+ +N A +        CE F  P  T  W      + 
Sbjct: 426 ILANANIDVID----VIPLIKTKNEENYATVVGYSAFLHCEYFASPKATVVW-----EVA 476

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTL 585
            ET PLE  DRY   +N     Y   E D   Y C   N +     +A L +     L +
Sbjct: 477 DETHPLEG-DRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNATKLRV 535

Query: 586 KPSFKKRPLES--ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII---GSGGRRKIFEN 640
            P   + P     E Y          C+       K  W KDG      G+   R + + 
Sbjct: 536 SPKNPRIPKSHVLELYCESQ------CDSHLKHSLKLSWSKDGEAFEMNGTEDGRIVIDG 589

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
             L IS ++ +D G+YSC+A         K ++ VL  P      P  + ++  +N  +R
Sbjct: 590 AYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPD----PPGNLHLSERQNRSVR 645

Query: 701 CS-----AHTEELLDVAYIWTHNGVRIGNMD-LNELETPNINIDGGLLEITNASFADAGE 754
            S      H  ++ +    +  N    G  + L  ++    ++   L       F     
Sbjct: 646 LSWEAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQGEETDVVLSLAPYVRYQFRVTAV 705

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW--TDGATNGRPITHYK 812
            E V +S     S         P   P  ++V         I+W          P   YK
Sbjct: 706 NE-VGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYK 764

Query: 813 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGE 870
           +    +W        E    + V  +T R       V+ P  ++ Y+ KV A N+LG   
Sbjct: 765 V----SWKPQ--GAPEEWEEEIVTNHTLR-------VMTPTVYAPYDVKVQAINQLG--- 808

Query: 871 PSSPSPQYNT---PADKPYQAP--SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
            SSP PQ  T     D P  AP   R+      +  + ++W  +P+E  +     Y+I W
Sbjct: 809 -SSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTL--VKVTWSSIPKETVHGLLRGYQINW 865

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
            K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 866 WKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESE 921


>gi|196016263|ref|XP_002117985.1| hypothetical protein TRIADDRAFT_62006 [Trichoplax adhaerens]
 gi|190579458|gb|EDV19553.1| hypothetical protein TRIADDRAFT_62006 [Trichoplax adhaerens]
          Length = 1318

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 227/819 (27%), Positives = 349/819 (42%), Gaps = 85/819 (10%)

Query: 188 RGPYFIKQPTDVVFDLS-KRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           + P    QP D V  L+  R+    + + C A G    +Y W   D        NL    
Sbjct: 59  KAPEITVQPIDYVDALAISRTHDEGVIVPCAATGDGTITYAWRHND-------QNL---Q 108

Query: 247 SDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEI 306
            D R  LSGGNL  +    + D G Y C A+N FG+ IS    L   F     L   P +
Sbjct: 109 FDNRIKLSGGNLTFSG-IVLADAGQYVCLATNAFGTSISREATLQIRF-----LPFMPGV 162

Query: 307 GNQ-----NWGKAMFCDPPTNY---PGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSA 357
             +     N    + C  P+     P + Y+   D   + + + +RV +S Y G L F +
Sbjct: 163 SEKFYRKINQNARLHCQIPSETSPRPDLIYWTMADN--SVIAQSERVALSIYAGDLIFIS 220

Query: 358 LEQIDAGNYSCNV--------QSKVSDTGRNGP----FFPLKVFPHSNFQQLKFPNNFPK 405
             + + G Y CN          S  S+T   G      F +   P      +  PN+   
Sbjct: 221 GWKNNTGTYRCNTIFNVFDPKSSSSSETRNTGGEQYLNFTINAVPAVAPSIIVPPNDTIA 280

Query: 406 TFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQG 464
              +      +V LEC+A GYP+P+  W +    LP N Y FE + R L + ++   D G
Sbjct: 281 NLNQ-----KRVILECIAVGYPIPTIIWQKSTGTLPINRYSFEQYGRHLVLKDIAEVDDG 335

Query: 465 EYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR 524
            Y C A +  S + +S  + +  +P +   ++D     ++D  W C A G   V Y W+ 
Sbjct: 336 VYQCTAISGGSQVTASARLKVHVDPKWITAISDTDQPVESDFNWPCVASG-STVGYRWYM 394

Query: 525 NGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
           NG+ +   T       +Y +  N  LTIR L    D  +Y C A N+     SS  L V 
Sbjct: 395 NGQRIVQST-------KYILNANGSLTIRSL-VRGDTKVYSCLAYNEHSNIVSSGWLNVT 446

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENG 641
              P F + P  ++T    G + TI C     P+P   + KDG  +      +  +  NG
Sbjct: 447 VAAPKFVEVPY-TQTTLFRGQSSTIRCTVTGGPRPDMTYTKDGGFVDKLLYNKYTVKPNG 505

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           NL+I  V   D+G Y CTATN +G  ++ G  +VL    + + L     I   +N  + C
Sbjct: 506 NLVIHNVVDSDAGEYKCTATNRYGTTDATGTAVVLSATVFTKPLAATF-IRRPKNFTISC 564

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
           +    + L+V   W   G  I         T   N     L   N++ +D+G++ CV  +
Sbjct: 565 TVQKADSLNVVLYWQREGKNI----TTSRATVRTNGLTSTLSYYNSTLSDSGQFACVAAT 620

Query: 762 TVGKIS-----TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
            V  +      +  T+ V   P  P      E+ ++S    W  G  N  P+  + I  R
Sbjct: 621 NVPYVGYVANPSLATLTVNDVPNPPFNFTYSELTRSSVLFSWLPGNPNNSPLLRFAIHYR 680

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
            N  ++W  ++E  I       T R+ A     L P++TY F+++A N +G  + S+   
Sbjct: 681 VNNVNSW-RIAEDYIPVSA---TFRRIA-----LSPFNTYRFRIVAVNAVGASQDST-YQ 730

Query: 877 QYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
            ++T  D PY AP   R+ G  G  G L I + PL RE+QN   I Y++ +R++  T  Q
Sbjct: 731 IFSTLGDVPYNAPGEFRVSGVTGNSGALDIRFVPLSREEQNDAGINYRLSFRQQGPT--Q 788

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           S +    G  G    R+      T YE+++Q  N+ G G
Sbjct: 789 SWSNVNTGTTG--TYRLAGLAQNTRYELRLQPFNNAGFG 825


>gi|410920619|ref|XP_003973781.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Takifugu rubripes]
          Length = 1151

 Score =  246 bits (628), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 203/785 (25%), Positives = 338/785 (43%), Gaps = 63/785 (8%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSG--GNLII-NDPRQVEDRG 270
           + C A G P P + W K             DP  D R    G  G  +I N+    E +G
Sbjct: 59  MMCEAKGNPEPEFRWTKN--------GQQFDPSLDPRLITEGNSGTFVIPNNGNLTEYQG 110

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYY 329
            Y C ASN+ G+ IS  ++     + +F  +   P +  +     + C+PP   P +  Y
Sbjct: 111 IYRCFASNRLGTAISREIEFIVPNVPKFPKETIEPVVVEEGQPFILNCNPPDGIPPLQIY 170

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSC-----NVQSKVSDTGRNGPF 383
           W        +E+D+RV +  +G LYFS A+++    +Y C      +++ V  T  +   
Sbjct: 171 WMTLSL-QHIEQDERVSMGLNGDLYFSHAVDKDSRRDYCCFAAFPRIRTIVQKTAMS--- 226

Query: 384 FPLKVFPHSNFQQLKFPNNF--PKTFPEAPKA-GDKVRLECVAFGYPVPSYNWTRRGSPL 440
               +   +N    + P+    P    E     G+++ LEC+A G+P P   W + G  L
Sbjct: 227 ---VIVKTTNAILQRRPSIMTPPGVKSETQLVKGEELILECIAAGFPTPQVEWVKMGQHL 283

Query: 441 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
           P  A  E+  ++L +P+V+ ED G+Y+C+A N         T+ ++  P +      +  
Sbjct: 284 PTKAKMESHGKLLIVPDVEQEDGGKYMCKAKNTVGEAVHYFTVIVEEPPEWVSEPESQLS 343

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
              +D+   C A G P    +W  NG  L     P    +R  + D +  + +     D 
Sbjct: 344 MIGSDVLIKCSASGTPQPAVTWRVNGAPLQDSPSP----NRRVLGDTI--VLHNTKASDS 397

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPK 619
           A+YQC A N+  T  S+A + ++ L P    +  + E Y+  EG  V + C   ++P   
Sbjct: 398 AVYQCEASNRHGTLLSNANIMIMNLPPMILTQ--DDEDYSAVEGKGVMMHCKVFSSPPSA 455

Query: 620 FVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 678
             W KD       G R  + +NG L I    ++DSG Y+C A N  G   +   ++ +  
Sbjct: 456 ITWSKDDTSDSVEGPRFSVHDNGTLEIYSAEKEDSGPYTCFAKNTEG-SSAINVMLSVKD 514

Query: 679 PSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNIN 736
           P+   + P  + I      Q  C A  ++    D   +W  +   I     N  E     
Sbjct: 515 PTRIMEPPEDLRILKGTTAQFSCLAEYDKSFSDDFEILWEKDDKEIA---FNYTENSRYF 571

Query: 737 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 796
           I+ G+L+I N S  D G Y C+ ++ +        ++V   P  P  + + E    S  +
Sbjct: 572 IEDGILQIVNVSHRDQGVYTCLARTPMDGDKAAALLLVLDVPDAPQYLVLSEHKSQSVKL 631

Query: 797 QWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
           +W  G  +    T + I    + W    W         KE+ R  G   ++I   L    
Sbjct: 632 KWIPGDDHNSSTTEFIIQYEESQWEPGNW---------KELLRVPGNHNSAILK-LHGHV 681

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            Y F+V   N +G G PS P+ +Y TP   P + P  I        +++I+WEPL   + 
Sbjct: 682 DYCFRVSGVNAVGRGPPSQPTERYRTPPAAPDKNPENIKIESHMPQEMNINWEPLLPIEH 741

Query: 915 NAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           N P + YK+ +R+++ + ++Q   +K +  V   V   P+   +  YE+K+QA N  G G
Sbjct: 742 NGPGLEYKVSYRRQDVEEDWQEHIVKRHSFV---VKNTPT---FVPYEIKIQARNHQGWG 795

Query: 974 PESEV 978
           PE  +
Sbjct: 796 PEPRI 800



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/389 (21%), Positives = 146/389 (37%), Gaps = 49/389 (12%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           ++ L C A G+P P  EW K           +   L  K    S G L+I    + ED G
Sbjct: 259 ELILECIAAGFPTPQVEWVK-----------MGQHLPTKAKMESHGKLLIVPDVEQEDGG 307

Query: 271 SYHCKASNKFGSII---SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN 327
            Y CKA N  G  +   +  V+    ++ E   + +  IG+    K      P   P V 
Sbjct: 308 KYMCKAKNTVGEAVHYFTVIVEEPPEWVSEPESQLS-MIGSDVLIKCSASGTPQ--PAVT 364

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
           +        +    ++RV       +     +  D+  Y C        + R+G      
Sbjct: 365 WRVNGAPLQDSPSPNRRVL---GDTIVLHNTKASDSAVYQCEA------SNRHG-----T 410

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSP----LP 441
           +  ++N   +  P        E   A  G  V + C  F  P  +  W++  +      P
Sbjct: 411 LLSNANIMIMNLPPMILTQDDEDYSAVEGKGVMMHCKVFSSPPSAITWSKDDTSDSVEGP 470

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
           R +  +N    L I + + ED G Y C A N   +   +V +S++       P  D  + 
Sbjct: 471 RFSVHDNGT--LEIYSAEKEDSGPYTCFAKNTEGSSAINVMLSVKDPTRIMEPPEDLRIL 528

Query: 502 NQADLTWTC-----EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
                 ++C     ++F   D    W ++ + +        +  RYFI+D +L I  ++ 
Sbjct: 529 KGTTAQFSCLAEYDKSFS-DDFEILWEKDDKEI---AFNYTENSRYFIEDGILQIVNVS- 583

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
            RD  +Y C A+  +    ++A L VL +
Sbjct: 584 HRDQGVYTCLARTPMDGDKAAALLLVLDV 612



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 120/319 (37%), Gaps = 48/319 (15%)

Query: 208 ILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267
           I +D+ + C A G P P+  W           A L D  S  R  L  G+ I+    +  
Sbjct: 345 IGSDVLIKCSASGTPQPAVTWRVNG-------APLQDSPSPNRRVL--GDTIVLHNTKAS 395

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKA--MFCDPPTNYPG 325
           D   Y C+ASN+ G+++S +  +    +    L +  E  +   GK   M C   ++ P 
Sbjct: 396 DSAVYQCEASNRHGTLLSNA-NIMIMNLPPMILTQDDEDYSAVEGKGVMMHCKVFSSPPS 454

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC-----------NVQSKV 374
               W++D   + V E  R  V  +G L   + E+ D+G Y+C           NV   V
Sbjct: 455 A-ITWSKDDTSDSV-EGPRFSVHDNGTLEIYSAEKEDSGPYTCFAKNTEGSSAINVMLSV 512

Query: 375 SDTGR-NGPFFPLKVFPHSNFQ---QLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS 430
            D  R   P   L++   +  Q     ++  +F   F    +  DK     +AF Y   S
Sbjct: 513 KDPTRIMEPPEDLRILKGTTAQFSCLAEYDKSFSDDFEILWEKDDKE----IAFNYTENS 568

Query: 431 YNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 490
             +   G              IL I NV   DQG Y C A       +++  + +   P+
Sbjct: 569 RYFIEDG--------------ILQIVNVSHRDQGVYTCLARTPMDGDKAAALLLVLDVPD 614

Query: 491 FTIPLT-DKHMDNQADLTW 508
               L   +H      L W
Sbjct: 615 APQYLVLSEHKSQSVKLKW 633


>gi|395531224|ref|XP_003767682.1| PREDICTED: neurofascin [Sarcophilus harrisii]
          Length = 1355

 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 220/830 (26%), Positives = 348/830 (41%), Gaps = 95/830 (11%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP  +     K  I++   +I + C A G P PS++W +         +   +   D 
Sbjct: 36  LSQPPTITKQSVKNYIVDPRDNILIECEAKGNPAPSFQWTRN--------SRFFNVAKDP 87

Query: 250 RFTL--SGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNLK 301
           R ++    G L+I+     R  E  G Y C A NKFG+ +S  + L         + NL 
Sbjct: 88  RVSMFRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTAVSNRIFLQVSKSPLWPKENLD 147

Query: 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI 361
             P +  +     + C+PP   P    +W        + +DKRV    +G LYFS +   
Sbjct: 148 --PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPINQDKRVSQGQNGDLYFSNVMLQ 204

Query: 362 DAG-NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFP--KTFPEAPKAGDKVR 418
           DA  +YSCN +   + T +    F LKV       +      +P   +  +    G  + 
Sbjct: 205 DAKTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVSERTPSFMYPLGTSSSQMVLRGMDLL 264

Query: 419 LECVAFGYPVPSYNWTRRGSPLPR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC+A G P P   W ++G  LP     FENFN+ L I NV  ED GEY C ASN   ++
Sbjct: 265 LECIASGVPAPDIAWYKKGGDLPAGKVKFENFNKALRITNVSEEDSGEYFCLASNKMGSI 324

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
             ++++ ++A P +     +  +    D    C A G P  T  W  NG+ L  E  P  
Sbjct: 325 RHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWLVNGDPL--EVAP-P 381

Query: 538 DQDRYFIQDNVLTIRYLNPERD-----PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
           +  R    D ++        RD      A+YQC A N      ++A + VL + P     
Sbjct: 382 NPSREVAGDTIIF-------RDTQIGSSAVYQCNASNDHGYLLANAFVSVLDVPPRMLS- 433

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVS 649
           P              + C    +P P   W K+G   GS   GG  ++ ENG+L ++   
Sbjct: 434 PRNQLIKVIHYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYQVHENGSLEMTMAR 491

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           ++D GIY+C ATN+ G  E++ RL V   P+   ++P    +    N+ L C    +  L
Sbjct: 492 KEDQGIYTCVATNILGKAENQVRLEV-KDPTRIIRVPEDQVVKRGSNVVLECRVKHDPTL 550

Query: 710 DVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
            +   W  +   + IGN    E +T         L I   +  D G Y C+  + + +  
Sbjct: 551 KLTVNWLKDDEPLYIGNRMKKEEDT---------LTIFGVADRDQGSYTCMASTELDRDI 601

Query: 768 TKTTVIVEGP---------------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 812
            K  + V                  P  P  +++ ++ + S  + W  G  N  PIT Y 
Sbjct: 602 AKAYLTVLAAQVAPTNRMAPLPKERPDPPRDLELTDLEERSVRLTWIPGDDNNSPITEYI 661

Query: 813 IIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
           +    +      W + S+H          G   +++   L P+  Y+F+VIA N++G   
Sbjct: 662 VQFEEDQFQPGVWHSHSKH---------PGSVNSAVLQ-LSPYVNYQFRVIAVNDVGSSH 711

Query: 871 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930
           PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++  
Sbjct: 712 PSIPSERYRTSGAPPESNPGDVKGAGSRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-- 769

Query: 931 TEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
                E  + + N  +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 770 -----EGRESWNNATVWGSRYMVSPTPVYVPYEIRVQAENDFGKGPEPDT 814


>gi|431913510|gb|ELK15185.1| Contactin-6 [Pteropus alecto]
          Length = 725

 Score =  245 bits (626), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 161/503 (32%), Positives = 245/503 (48%), Gaps = 26/503 (5%)

Query: 484 SIQAEPNFTIPLTDKHMDNQ-----ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           S++A P    P  ++ + N        L W C+A G P   Y+WF+NGELL         
Sbjct: 4   SLKARPASAPPEWERQIQNTYLSIYDSLFWECKASGKPSPRYTWFKNGELL-------RP 56

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
            +R  +++  L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++  +
Sbjct: 57  GERIHVENGTLIIATLNAS-DSGVYQCAAENEFQMIYANAELRVLASAPDFSKNPIKKTS 115

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
               GG+VTI C P A P+    WK+  + +    R  + E+G+L +  V+R D+G Y+C
Sbjct: 116 VVHVGGDVTIDCKPTAFPRAAISWKRGTSSLRPSRRVYVSEDGSLAMHNVTRSDAGPYTC 175

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
           TATN  G+ +  G L+V    +     P  + +    ++ L C    +  ++VA++W+ +
Sbjct: 176 TATNQFGVAKDTGGLVVKER-TVITVPPAPMDVTVGESIVLPCQVSHDPSVEVAFVWSFD 234

Query: 719 GVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
           G  I   DL +       + G   G L I N     +G+Y C VK+T+  +S    VIV 
Sbjct: 235 GHVI---DLKKEVAHFERLGGESIGDLMIRNIQLNHSGKYLCAVKTTLESLSAAADVIVR 291

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           GPPG P  V V  V  T++ + W  GA N  PI  + + ART ++  W  VS        
Sbjct: 292 GPPGPPEDVSVEHVSSTTSQLSWRPGADNNSPIQLFTVQARTPFSVGWQAVS-----TVP 346

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
           +  +G+   +    L PW  YEF+V+AGN +G GEPS  S    T A  P  AP+ + GG
Sbjct: 347 EILSGKTRNATVVGLSPWVEYEFRVVAGNSIGIGEPSESSEPLRTKASVPVVAPTNVDGG 406

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
           GG   +L I+WE +P E Q+     Y +  R      +  + +    +    V R  S  
Sbjct: 407 GGGRSELVITWESIPEELQSGGEFGYLVLLRPAGSAAWTEQRVPAVESCRF-VYRNESIA 465

Query: 956 YYTEYEVKVQAINDVGPGPESEV 978
             + +EV+V   N  G G  S V
Sbjct: 466 PLSPFEVQVGVYNAEGDGALSAV 488



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 127/591 (21%), Positives = 211/591 (35%), Gaps = 61/591 (10%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  EC A G P P Y W + G  L         N  L I  +   D G Y C A N+ 
Sbjct: 29  DSLFWECKASGKPSPRYTWFKNGELLRPGERIHVENGTLIIATLNASDSGVYQCAAENEF 88

Query: 475 SALESSVTISIQAE-PNFTI-PLTDKHMDN-QADLTWTCEAFGVPDVTYSWFRNGELLNS 531
             + ++  + + A  P+F+  P+    + +   D+T  C+    P    SW R       
Sbjct: 89  QMIYANAELRVLASAPDFSKNPIKKTSVVHVGGDVTIDCKPTAFPRAAISWKRG------ 142

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
            T  L    R ++ ++     +     D   Y C A NQ      +  L V+  +     
Sbjct: 143 -TSSLRPSRRVYVSEDGSLAMHNVTRSDAGPYTCTATNQFGVAKDTGGL-VVKERTVITV 200

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFEN------GNL 643
            P   +   GE  ++ + C     P  +  FVW  DG++I        FE       G+L
Sbjct: 201 PPAPMDVTVGE--SIVLPCQVSHDPSVEVAFVWSFDGHVIDLKKEVAHFERLGGESIGDL 258

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +I  +  + SG Y C          +   +IV   P   E +  +   +    L  R  A
Sbjct: 259 MIRNIQLNHSGKYLCAVKTTLESLSAAADVIVRGPPGPPEDVSVEHVSSTTSQLSWRPGA 318

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
                + +  +       +G   ++ +  P I + G     T    +   EYE   V  +
Sbjct: 319 DNNSPIQLFTVQARTPFSVGWQAVSTV--PEI-LSGKTRNATVVGLSPWVEYEFRVVAGN 375

Query: 762 TVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATNG 805
           ++G          + TK +V V  P  + GG       ++   I W         G   G
Sbjct: 376 SIGIGEPSESSEPLRTKASVPVVAPTNVDGGGG----GRSELVITWESIPEELQSGGEFG 431

Query: 806 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
                Y ++ R   ++ W    + V   E  R+  R E+     + P S +E +V   N 
Sbjct: 432 -----YLVLLRPAGSAAW--TEQRVPAVESCRFVYRNES-----IAPLSPFEVQVGVYNA 479

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
            G G  S+ +  Y+   D+P  AP           ++ +SW  +   +     + Y++ +
Sbjct: 480 EGDGALSAVAIVYSG-EDEPQLAPRGTSVQSFSASEVEVSWNAIAWNRSTGRVLGYEVLY 538

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
                 +     ++  GNV      I      T Y   V+A N  G GP S
Sbjct: 539 WTDGARDPMVGKIRVSGNVTSKT--ITGLKANTVYFAAVRAYNTGGAGPAS 587



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 47/319 (14%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI + +   C A G P+P Y WFK           L+ P   +R  +  G LII      
Sbjct: 26  SIYDSLFWECKASGKPSPRYTWFKN--------GELLRP--GERIHVENGTLIIAT-LNA 74

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPG 325
            D G Y C A N+F  I + +         +F+     +    + G  +  D  PT +P 
Sbjct: 75  SDSGVYQCAAENEFQMIYANAELRVLASAPDFSKNPIKKTSVVHVGGDVTIDCKPTAFPR 134

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSK---VSDTGRNGP 382
               W R    + +   +RV+VS DG+L    + + DAG Y+C   ++     DTG    
Sbjct: 135 AAISWKRGT--SSLRPSRRVYVSEDGSLAMHNVTRSDAGPYTCTATNQFGVAKDTG---- 188

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAP---KAGDKVRLECVAFGYPV--PSYNWTRRG 437
                         L        T P AP     G+ + L C     P    ++ W+  G
Sbjct: 189 -------------GLVVKERTVITVPPAPMDVTVGESIVLPCQVSHDPSVEVAFVWSFDG 235

Query: 438 SPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 490
             +       +F R+       L I N+++   G+Y+C       +L ++  + ++  P 
Sbjct: 236 HVIDLKKEVAHFERLGGESIGDLMIRNIQLNHSGKYLCAVKTTLESLSAAADVIVRGPPG 295

Query: 491 FTIPLTDKHMDN-QADLTW 508
               ++ +H+ +  + L+W
Sbjct: 296 PPEDVSVEHVSSTTSQLSW 314


>gi|241631838|ref|XP_002410294.1| neuronal cell adhesion molecule, putative [Ixodes scapularis]
 gi|215503376|gb|EEC12870.1| neuronal cell adhesion molecule, putative [Ixodes scapularis]
          Length = 1224

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 217/816 (26%), Positives = 358/816 (43%), Gaps = 102/816 (12%)

Query: 187 PRGPYFIKQPTDVVF---DLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           P  P  IKQP         +S+  +     L C A G P P Y+W K +        N  
Sbjct: 21  PSPPTMIKQPKYEQLYQVSVSQDELDKPFLLECEAQGNPEPEYKWTKNN--------NEF 72

Query: 244 DPLS-DKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL 300
           D +S DKR +     G LI   P  V D G Y C ASN  G+ +S SV L    +  F  
Sbjct: 73  DYVSYDKRISQQPRRGTLIFTKPDDV-DEGLYQCFASNLHGTSVSNSVFLRKSELNSFAE 131

Query: 301 KRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSA 357
           +   E+   +    ++ C+PPT YP  N +W   Y    +      R+    +G L+FS 
Sbjct: 132 ESTKEVYVVEGDPLSLDCNPPTGYPRPNIFWLIQYSSGALRNVNSSRITADPEGDLHFSR 191

Query: 358 LEQIDA---GNYSCNVQSKVSDTGRNGPFFPLKVFP--------HSNFQQLKFPNNFPKT 406
           +E+ DA     Y+C+  S      + G    L+V P        H+  +Q   P N    
Sbjct: 192 VERGDALADAVYTCSATSVFRREYKIGNKIQLRVEPVSSAGKAEHAPIKQYLSPPNL--- 248

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQGE 465
                  G +++L C+  G P+P  +W++RGS    + + + N+ + L I +V  ED+G 
Sbjct: 249 ---VALKGQELKLYCIFGGSPLPQISWSKRGSSAASSRFTYTNYGKTLEIRSVGFEDEGT 305

Query: 466 YICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR 524
           Y C+A+N     +S ++ + +++ P +     + +   +  +++ C A G+P+    WF 
Sbjct: 306 YECQANNGVGVAQSHAMNVKVESAPYWLRSPENTNAAEEESVSFECSASGIPEPKLQWFV 365

Query: 525 NG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
           NG  L N+E  P     R  ++  +LT+  L  +RD A+YQC A N     +    L VL
Sbjct: 366 NGVPLQNAEANP-----RRKVEGPLLTLESLT-KRDTAVYQCNASNPHGYAFKDFYLNVL 419

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 643
            L PS  + P E  T A      T+ C    AP+P+  W K+   + +GGR K+ ++G+L
Sbjct: 420 ALPPSIVEAP-EPLTLAVVTSRATLRCRVFGAPRPEVKWMKETQEL-TGGRYKVLDSGDL 477

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            I  +   D G Y+C A+N  G   + G L V            ++     ++   R +A
Sbjct: 478 QIDDLLVTDQGEYTCYASNKFGDASASGALEV-----------KELRGGGGQSATFRYNA 526

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPN-----INIDGGLLEITNASFADAGEYECV 758
             +  L++   W  NG         EL  P+     +      L IT     D+G Y C+
Sbjct: 527 EADPSLELRISWLFNG---------ELVDPDADARMVQASDNSLTITRTIELDSGVYTCL 577

Query: 759 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN 818
            ++ +     + T+ V+  P  P  V+V E     A ++W        PI  Y I   T+
Sbjct: 578 AQTDLDGDKAQATLTVQDVPNPPQMVRV-ECDTLMALVEWKPTGDRRAPILSYSIQYNTS 636

Query: 819 WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
           ++  TW +   ++   +            +  + PW+ Y F+V+A N++G   PS  S +
Sbjct: 637 FSPDTWEDAFVNIPAPDT---------KFKVSMSPWANYTFRVVARNKIGPSLPSGASSR 687

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN--DTEFQS 935
             TP D P++ P ++               P+P  +QNAP  +YK+FW++ +  D  + S
Sbjct: 688 CTTPEDVPHKNPDKV---------------PMPPIEQNAPGFFYKVFWKRNDLPDAAWNS 732

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           + + ++          P+   +  Y +KV+A N  G
Sbjct: 733 KIIDDWKQNRHVEYGQPT---FKPYRIKVEAHNRRG 765


>gi|332019316|gb|EGI59823.1| Neuroglian [Acromyrmex echinatior]
          Length = 1291

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 222/814 (27%), Positives = 357/814 (43%), Gaps = 63/814 (7%)

Query: 180 IENPDKIPRGPYFIKQPTD-VVFDLSKRSILND---ITLSCYAGGYPNPSYEWFKEDYVQ 235
           +++P +I + P     PTD  +F +++ +   +     + C A G P P Y W K     
Sbjct: 59  VQSPPRISKQP-----PTDEQLFQVARPNASENHKPFLIECEAEGEPAPVYHWIKNG--- 110

Query: 236 DRLVANLIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                  + P  D R +     G L+I+ P Q ED G Y C A N  G+  S SV +   
Sbjct: 111 ----KPFLWPAYDDRISQQPGRGTLVISRP-QNEDLGQYQCFAENDGGTATSNSVFVRKA 165

Query: 294 FIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYD 350
            +  F  +   P    +     + C PP  +P  N YW        ++   + R+ +  +
Sbjct: 166 ELNSFKDENPIPLSATEGAPFKLTCQPPDGWPKPNVYWLIQDIAGSIKSINNSRMTLDPE 225

Query: 351 GALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFP--HSNFQQLKFPN-NFP 404
           G L+FS + + DA +   Y+C   S   +  + G    L V     S+ Q    P   + 
Sbjct: 226 GNLWFSNVTRDDASDDFYYACAATSVFRNEYKVGNKVLLNVISTGASSGQNKYAPERQYV 285

Query: 405 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFE-NFNRILTIPNVKVED 462
               E    G KV L C+  G P+P   W++ G  + P +   + N+ + L I +V  ED
Sbjct: 286 TRKNEIAMRGKKVELYCIFGGTPLPQMVWSKNGQMIKPSDRIIQGNYGKSLIIKHVNFED 345

Query: 463 QGEYICRASNDRSALES-SVTISIQAEPNFTIP--LTDKHMDNQADLTWTCEAFGVPDVT 519
           QG+Y C ASN     +S S+ + + A P F +     +   D  A++   CEA GVP   
Sbjct: 346 QGQYTCEASNGVDQAQSYSINLQVMASPYFIVEPEFVNAAEDETAEIR--CEASGVPVPE 403

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579
             W RNG+ ++      E++ R    ++++  R +  + D A Y C A N     Y    
Sbjct: 404 IKWIRNGKPISEAP---ENKRRKVTSNSIIIERLV--KNDTANYGCNATNSFGYVYKDVF 458

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE 639
           + VL L P   + P+   +   +   + I C    APKP+  W ++G  + +GGR KI +
Sbjct: 459 INVLALAPDITQPPMNLSSV--DSKTIRITCRVFGAPKPEVKWIRNGQEL-TGGRYKILD 515

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
            G+L I  V   D+G Y+C A N  G   +   L+V    +    +P    +AA      
Sbjct: 516 VGDLEIENVIFLDAGTYTCYAKNKLGEVNASAILMVKEH-TRITDVPEDYEVAAGSTATF 574

Query: 700 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 759
           RC+A T+  L +   W  NG  I   D  E+E   +      L IT  +  D+G Y CV 
Sbjct: 575 RCNAVTDPTLPLTIDWLSNGQPI---DF-EMEPRFVRSSDYSLLITKTTELDSGIYTCVA 630

Query: 760 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 819
           ++ + + S + T+IV+  P  P  + + +    SA +QW     N  PI  Y I   T +
Sbjct: 631 RTDLDETSAQATLIVQDVPNAPRLISI-KCQSNSAIVQWIPMGDNRSPILRYTIQYNTTF 689

Query: 820 N-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878
              TW    + V   +          + E  + PW+ Y F+V+A N++G   PSS S   
Sbjct: 690 TPDTWEIAHDQVPATD---------QTYEVPMSPWANYTFRVLAWNKIGTSLPSSHSDVC 740

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSET 937
            T  D P + P  + G G    +L ISW  + + + N     Y+IF+R+     ++ +  
Sbjct: 741 TTLPDLPNKNPDNVVGKGTTPQNLVISWTVMSQIEHNGAKFEYRIFYRRDIRGEDWITNN 800

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           + ++    + V   P+   Y  Y +KV AIN+ G
Sbjct: 801 IHDWRKNTLVVENQPT---YQRYRIKVVAINEKG 831


>gi|405969232|gb|EKC34215.1| Contactin [Crassostrea gigas]
          Length = 820

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 176/575 (30%), Positives = 273/575 (47%), Gaps = 49/575 (8%)

Query: 440 LPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 499
           +P    + +FNR++ I N++ E++G Y C A    S     V ++I+++P F +PL  KH
Sbjct: 1   MPDRTKYSDFNRVVEIDNIQYEEEGTYECTAKRKSSVASKEVVLAIESKPYFLLPLDHKH 60

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
           +D  AD+TW C A+G P   YSW++NG LL     P  D     I  N LT+R  N ++ 
Sbjct: 61  LDEGADVTWRCLAYGKPTPVYSWYKNGVLLQ----PTADSG-ITINRNTLTLRNANKQKH 115

Query: 560 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 619
             MYQC A N   +  S+AQ+RVL+ KP+F K PL     A   G V I C PE APKP+
Sbjct: 116 EGMYQCAATNVHGSSLSAAQIRVLSFKPTFAKYPLPESIDAALNGEVVIPCEPEGAPKPE 175

Query: 620 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
             W K+   + S  R +I  N  L I+ ++  D G Y C A NV G D S  RL V    
Sbjct: 176 ITWLKNNVQVNSDSRVQIMPNNFLKITQINYGDQGYYECRAKNVLGSDGSFCRLNVKVAT 235

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN-ELETPNINID 738
           +      P+  +  ++   + CSA  +  LD+ Y+WT +G +I ++  N   E  N+   
Sbjct: 236 TITRAPNPETPVYQNKTALIYCSASYDLSLDLVYVWTFSG-KILDLQRNGHYELANLPSG 294

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ- 797
            GL  I  A F   G YEC+ ++ + +   +  +IV GPPG   G+       T+ +I  
Sbjct: 295 KGLY-IKMAQFYHEGTYECIARTPLNEARAQGRLIVYGPPGEVAGLYADPGTPTTNSIDI 353

Query: 798 -WTDGATNGRPITHYKIIA-----------RTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +  GA++ R    Y I+             +N   T F  S  + G   D  T      
Sbjct: 354 FFFLGASH-RSTIEYLIVEFEIQSEKGKWYFSNETHTVFAPSTVIPGNNRDMRTITVRG- 411

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG--GGGKIGDLS 903
               L P + Y F++ A N LG G P +PS   NT    P   P+ +     G ++G L 
Sbjct: 412 ----LDPGNGYSFRIKAVNALGVGPPCTPSGTVNTLEAPPAAPPANLSSRTEGVEVGQLM 467

Query: 904 ISWEPLPRE---KQNAPNIYYKIFWRKKN-----DTEFQSETLKEYGNVGI--------- 946
           ++W+ LP+     Q   ++ Y +++R+       D  +   +++   NV +         
Sbjct: 468 LTWKKLPKRYHGVQLESDVSYIVYYRQLKVSAAPDALWNMASIQTLRNVVVVHEVITDWE 527

Query: 947 ---AVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               V+++  +F++TE+E K+Q  N  G    S +
Sbjct: 528 QEEVVIQVGEDFFWTEFETKIQTKNPHGRSHNSSI 562



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 117/280 (41%), Gaps = 25/280 (8%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFENFNR-ILTIPNV-KVEDQGEYICRA 470
           G  V   C+A+G P P Y+W + G  L P        NR  LT+ N  K + +G Y C A
Sbjct: 64  GADVTWRCLAYGKPTPVYSWYKNGVLLQPTADSGITINRNTLTLRNANKQKHEGMYQCAA 123

Query: 471 SNDRSALESSVTISIQA-EPNFTIPLTDKHMDN--QADLTWTCEAFGVPDVTYSWFRNGE 527
           +N   +  S+  I + + +P F      + +D     ++   CE  G P    +W +N  
Sbjct: 124 TNVHGSSLSAAQIRVLSFKPTFAKYPLPESIDAALNGEVVIPCEPEGAPKPEITWLKNNV 183

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
            +NS      D     + +N L I  +N   D   Y+CRAKN L +  S  +L V  +  
Sbjct: 184 QVNS------DSRVQIMPNNFLKITQIN-YGDQGYYECRAKNVLGSDGSFCRLNV-KVAT 235

Query: 588 SFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--- 642
           +  + P   ET   +     I+C+   + +    +VW   G I+    R   +E  N   
Sbjct: 236 TITRAP-NPETPVYQNKTALIYCSASYDLSLDLVYVWTFSGKILDL-QRNGHYELANLPS 293

Query: 643 ---LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
              L I        G Y C A        ++GRLIV +GP
Sbjct: 294 GKGLYIKMAQFYHEGTYECIARTPLNEARAQGRLIV-YGP 332



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 104/270 (38%), Gaps = 31/270 (11%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           D+T  C A G P P Y W+K           L+ P +D   T++   L + +  + +  G
Sbjct: 66  DVTWRCLAYGKPTPVYSWYKNGV--------LLQPTADSGITINRNTLTLRNANKQKHEG 117

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE-IGNQNWGKAMFCDPPTNYPGVNYY 329
            Y C A+N  GS +S +      F   F     PE I     G+ +    P   P     
Sbjct: 118 MYQCAATNVHGSSLSAAQIRVLSFKPTFAKYPLPESIDAALNGEVVIPCEPEGAPKPEIT 177

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W ++     V  D RV +  +  L  + +   D G Y C  ++ +   G +G F  L V 
Sbjct: 178 WLKNNVQ--VNSDSRVQIMPNNFLKITQINYGDQGYYECRAKNVL---GSDGSFCRLNVK 232

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP---SYNWTRRGS--PLPRNA 444
             +     + PN      PE P   +K  L   +  Y +     Y WT  G    L RN 
Sbjct: 233 VATTIT--RAPN------PETPVYQNKTALIYCSASYDLSLDLVYVWTFSGKILDLQRNG 284

Query: 445 YFENFN----RILTIPNVKVEDQGEYICRA 470
           ++E  N    + L I   +   +G Y C A
Sbjct: 285 HYELANLPSGKGLYIKMAQFYHEGTYECIA 314



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 107/284 (37%), Gaps = 36/284 (12%)

Query: 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFC 317
           D  Q E+ G+Y C A  K  S+ S+ V LA      F+   + K   E  +  W    + 
Sbjct: 17  DNIQYEEEGTYECTAKRK-SSVASKEVVLAIESKPYFLLPLDHKHLDEGADVTWRCLAYG 75

Query: 318 DPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDT 377
            P   Y      W ++        D  + ++ +     +A +Q   G Y C      + T
Sbjct: 76  KPTPVYS-----WYKNGVLLQPTADSGITINRNTLTLRNANKQKHEGMYQC------AAT 124

Query: 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPK-TFPEAPKAG--DKVRLECVAFGYPVPSYNWT 434
             +G          +  + L F   F K   PE+  A    +V + C   G P P   W 
Sbjct: 125 NVHG-----SSLSAAQIRVLSFKPTFAKYPLPESIDAALNGEVVIPCEPEGAPKPEITWL 179

Query: 435 RRGSPLPRNAYFENF-NRILTIPNVKVEDQGEYICRASNDRSA------LESSVTISIQA 487
           +    +  ++  +   N  L I  +   DQG Y CRA N   +      L   V  +I  
Sbjct: 180 KNNVQVNSDSRVQIMPNNFLKITQINYGDQGYYECRAKNVLGSDGSFCRLNVKVATTITR 239

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVP-DVTYSWFRNGELLN 530
            PN   P+      N+  L +   ++ +  D+ Y W  +G++L+
Sbjct: 240 APNPETPV----YQNKTALIYCSASYDLSLDLVYVWTFSGKILD 279



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 15/135 (11%)

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP-- 910
           W+ +E K+   N  G    SS    Y+     P   P+ I G G     L++ WEP+P  
Sbjct: 541 WTEFETKIQTKNPHGRSHNSSIVVVYSA-MGMPVAVPTNIWGEGYNSTALTVHWEPVPDT 599

Query: 911 ----REKQNAPNIYYKIFWRKKNDTE--FQSETLKEYG--NVGIAVVRIPSEFYYTEYEV 962
               + K     + Y +  + ++DT+     + ++ +G  N G+ +   P  +YY    V
Sbjct: 600 RNEIKGKLGGYQVLYYLRTQDEDDTKDFKHRQAIRFHGQRNSGVVIGLSPDTYYY----V 655

Query: 963 KVQAINDVGPGPESE 977
           +VQ   D G GP  E
Sbjct: 656 QVQVFTDAGLGPLGE 670


>gi|260822511|ref|XP_002606645.1| hypothetical protein BRAFLDRAFT_120092 [Branchiostoma floridae]
 gi|229291989|gb|EEN62655.1| hypothetical protein BRAFLDRAFT_120092 [Branchiostoma floridae]
          Length = 2215

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 190/667 (28%), Positives = 301/667 (45%), Gaps = 45/667 (6%)

Query: 324  PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
            P    YW +D   N ++  +R+ +  + +L F+ +E+ DAG YSC  +     T R    
Sbjct: 1117 PPPTIYWTKD-GSNPIDLTERISIDAENSLIFANVEEGDAGEYSCRAEYSKLGTIRIANT 1175

Query: 384  FPLKVFPHSNFQQLKFPNNFPKTFPEAP-KAGDKVRLECVAFGYPVPSYNWTR-RGSPLP 441
              L +   ++ +  + P+   +     P   G+ + L C+  G P P   W R  G  LP
Sbjct: 1176 LTL-IVDTASPRGARAPSFLKRDINLPPVNRGEDLTLRCITEGLPTPEVRWRRTSGGSLP 1234

Query: 442  RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
             +A        L I  V   D G Y C ASN        V +++ A P +      + + 
Sbjct: 1235 -SARARVVGTSLIIEEVVERDAGSYECTASNSLGKDTYEVMVTVNAAPYWKTEPEGQMLA 1293

Query: 502  NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
               D T  CEA G P    SW RNGE       PL DQ    +    L+++ L  + + A
Sbjct: 1294 PGDDATILCEAAGTPTPEVSWKRNGE-------PLGDQANRRVSGTTLSLQELVKD-NSA 1345

Query: 562  MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
            +YQC A+N L TR ++A + V+ L P       +   Y  +  +  + C    +PKP+  
Sbjct: 1346 VYQCIARNNLGTRITNAYINVVELPPIMLTAANKKYAYV-QDQDAQLDCLSFGSPKPEIT 1404

Query: 622  WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
            W K+  +  +G R ++  NG L+I+ VS +D G Y C A N  G +  +  L V    + 
Sbjct: 1405 WYKEELL--AGDRYQVLSNGTLVITTVSTEDDGKYKCMAINKFGEEPLQAELSVKRK-TT 1461

Query: 682  YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 741
                P  + + A    Q  C+   +  L++   W  NG+ I  M  + +  P +    G 
Sbjct: 1462 IATPPIALEVRAGNEAQFVCAVDKDPDLELTITWLKNGIPI--MPGSRIMQPVL----GT 1515

Query: 742  LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 801
            L I +   +D+  Y C+ ++T  + S +  + V   P  P  +Q+     +S T+ W  G
Sbjct: 1516 LLIKDTINSDSAIYTCLARTTRDEASAQAALSVIDVPEPPMNLQLSNQADSSVTLSWNVG 1575

Query: 802  ATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859
            + N  PI  Y I    N      W         +E+    G+   + +  L PW TY+F+
Sbjct: 1576 SDNNSPIEGYTIQYEENRMMPGEW---------QEMKVIDGKDILTADLDLNPWLTYQFR 1626

Query: 860  VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
            V A N++G  EPS  +  Y TPA  P   P  I G G +  ++ ISWEPLP  +QN P +
Sbjct: 1627 VTARNKVGESEPSDATEGYTTPAAAPSSVPGGIKGEGTEPTNMVISWEPLPGLQQNGPGL 1686

Query: 920  YYKIFW--------RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
             Y++ +        R++ D+++ +ET+ +       V   P+   YT YE+ VQA ND G
Sbjct: 1687 KYEVRYRQQPEARKRRQADSDWTTETVNDPNGNEFIVEDTPT---YTAYEITVQAKNDFG 1743

Query: 972  PGPESEV 978
             GP S+V
Sbjct: 1744 DGPLSDV 1750



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 133/371 (35%), Gaps = 88/371 (23%)

Query: 481  VTISIQAEPNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
            + +++   P  T     +H+ D +  +   CEA G P++ YSW +NG  L+ ++ P    
Sbjct: 926  IALTVPMPPVITKQAPTQHIVDPRELIVIDCEATGSPEIRYSWLKNGRELDVDSDP---S 982

Query: 540  DRYFIQDNVLTIRYL----NPERD-PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK---- 590
              +    N  TI       NP++     YQCRA N   T  ++    ++T  P F     
Sbjct: 983  ISWSAAPNSGTITIELDGDNPDKSYEGKYQCRAANHRGTAVTNEIEVIITASPLFAFAED 1042

Query: 591  ---------KRPLESETYAGEG-------------GNVTIFCNP---------------- 612
                     +  L+  +  GE               N+ I  +P                
Sbjct: 1043 REITVPVGAQHVLKCLSILGEAIHRIIIGLCLMMSLNILIPASPLFAFAEDREITVPVGA 1102

Query: 613  -----------EAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 660
                       EA P P   W KDG N I    R  I    +L+ + V   D+G YSC A
Sbjct: 1103 QHVLKCLSILGEAIPPPTIYWTKDGSNPIDLTERISIDAENSLIFANVEEGDAGEYSCRA 1162

Query: 661  T-NVHGMDESKGRLIVL---------HGPSYYEQ---LPPKITIAAHRNLQLRCSAHTEE 707
              +  G       L ++           PS+ ++   LPP   +    +L LRC      
Sbjct: 1163 EYSKLGTIRIANTLTLIVDTASPRGARAPSFLKRDINLPP---VNRGEDLTLRCITEGLP 1219

Query: 708  LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
              +V +  T  G          L +    + G  L I      DAG YEC   +++GK +
Sbjct: 1220 TPEVRWRRTSGG---------SLPSARARVVGTSLIIEEVVERDAGSYECTASNSLGKDT 1270

Query: 768  TKTTVIVEGPP 778
             +  V V   P
Sbjct: 1271 YEVMVTVNAAP 1281



 Score = 43.9 bits (102), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 12/72 (16%)

Query: 210  NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
             D  L C + G P P   W+KE+ +             D+   LS G L+I      ED 
Sbjct: 1387 QDAQLDCLSFGSPKPEITWYKEELLA-----------GDRYQVLSNGTLVITT-VSTEDD 1434

Query: 270  GSYHCKASNKFG 281
            G Y C A NKFG
Sbjct: 1435 GKYKCMAINKFG 1446


>gi|350588710|ref|XP_003357453.2| PREDICTED: neurofascin-like, partial [Sus scrofa]
          Length = 1197

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 207/755 (27%), Positives = 326/755 (43%), Gaps = 68/755 (9%)

Query: 256 GNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNLKRAPEIGNQ 309
           G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL   P +  +
Sbjct: 51  GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLD--PVVVQE 108

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSC 368
                + C+PP   P    +W        + +DKRV   ++G LYFS  + Q    +YSC
Sbjct: 109 GAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSC 167

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGY 426
           N +   + T +    F LKV       +      +P+    +     G  + LEC+A G 
Sbjct: 168 NARFHFTHTIQQKNPFNLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGV 227

Query: 427 PVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485
           P P   W ++G  LP + A  ENFN+ L I NV  ED GEY C ASN   ++  ++++ +
Sbjct: 228 PTPDIAWYKKGGDLPSDKAKLENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRV 287

Query: 486 QAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ 545
           +A P +     +  +    D    C A G P  T  W  NGE L S      + +R    
Sbjct: 288 KAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP---PNPNREVAG 344

Query: 546 DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN 605
           D ++        R  A+YQC   N+     ++A + VL + P     P            
Sbjct: 345 DTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNR 401

Query: 606 VTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATN 662
             + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D GIY+C ATN
Sbjct: 402 TRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATN 459

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--V 720
           + G  E++ RL V   P+   ++P          +QL C    +  L +   W  +   +
Sbjct: 460 ILGKAENQVRLEV-KDPTRIYRMPEDQVAQRGTTVQLECRVKHDPSLKLTVSWLKDDEPL 518

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV------ 774
            IGN    E ++         L I   +  D G Y CV  + + +   K  + V      
Sbjct: 519 YIGNRMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQAT 569

Query: 775 ---------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 825
                    +G P  P  +++ ++ + S  + W  G  N  PIT Y +     +    F 
Sbjct: 570 PTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQ 625

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +  +  ++ G   +++   L P+  Y+F+VIA NE+G   PS PS +Y T    P
Sbjct: 626 PG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPP 681

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
              PS + G G +  ++ I+W P+       PN+ Y + WR++       ET + + NV 
Sbjct: 682 ESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVT 734

Query: 946 IAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +   R  +     Y  YE++VQA ND G GPE + 
Sbjct: 735 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDT 769


>gi|347964370|ref|XP_311259.5| AGAP000720-PA [Anopheles gambiae str. PEST]
 gi|333467498|gb|EAA45046.5| AGAP000720-PA [Anopheles gambiae str. PEST]
          Length = 1260

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 218/800 (27%), Positives = 338/800 (42%), Gaps = 51/800 (6%)

Query: 190 PYFIKQP--TDVVFDLSKRSILND-ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  IKQP   +++F ++++   +    + C A G P P Y W K      +      D  
Sbjct: 39  PRIIKQPPPDEMLFQVAQQGESDKPFLIECEAEGEPTPKYRWIKNG---KKFEWQTYD-- 93

Query: 247 SDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
            D+     G G L+I  PR  ED G Y C A N+ G+  S SV +    +  F    +P+
Sbjct: 94  -DRMSQQPGRGTLVITSPRD-EDLGQYQCFAENEHGTATSNSVFVRKAELNSFK-DGSPQ 150

Query: 306 IGNQNWGK--AMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSALEQI 361
               + GK   + C PP  +P  N YW        +    + R+ +  +G L+FS + + 
Sbjct: 151 TLQADEGKPFKLVCQPPDGWPKPNVYWMIQNMDGGIRSINNSRMTLDPEGNLWFSNVTRD 210

Query: 362 DAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPKAGD 415
           D  N   Y+C   S      + G    L+V     +  Q + P    +     E    G 
Sbjct: 211 DESNDFFYACAASSVFRSEYKIGNRVLLQVKQTGISAAQNRHPPQRQYVSRKNEVALKGK 270

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASND 473
           ++ L C+  G P+P   WT+ G  +  N   +  N+ + L I  V  ED G Y C  SN 
Sbjct: 271 QIELFCIYGGTPLPETVWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNG 330

Query: 474 RSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
               +S S+ +++ A P FT+     +        + CEA G P     W  NG+ ++  
Sbjct: 331 VGQADSYSINLAVNAVPYFTVEPEIVNAAEGETAEFKCEAAGNPKPNIMWIHNGKQIDVS 390

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
               +   R  +  + + I  L  + D   Y C A N L   Y    L VL L P     
Sbjct: 391 ----QGNARRIVGSSSIYISKLQ-KSDTGNYGCNATNSLGYVYKDVYLNVLALAPEITDP 445

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDD 652
           P     +  +  NVT+ C    APKP+  W ++   + +GGR +   +G+L I  V  DD
Sbjct: 446 P--KREFTVDQRNVTMTCRVFGAPKPQVKWLRNDREL-TGGRYQTMPSGDLFIRDVKFDD 502

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   + G LIV    +     P      A   +  RC+A  +  L++ 
Sbjct: 503 AGEYTCHAVNNLGSKSASGELIVKER-TVINDPPQDYEAEAGTTVTFRCNAIADSSLELT 561

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
             W   G  I   D  E +   I      L I+     D G Y C+ ++ + ++    T+
Sbjct: 562 IEWLTKGEII---DF-ENQPRFIRTSDNSLMISKTIELDTGTYTCLARTDLDEVMANATL 617

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
            V   P  P  +  V      A I+W     N  PI +Y I   T++    ++V      
Sbjct: 618 TVMDRPN-PPTLTRVNCKGKVAQIEWISNGDNRSPILNYIIEYNTSFTPDTYDVLS---- 672

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              D   G   A   N   PW+ Y F+VIA N++G   PS  S    T +  PY+ P  +
Sbjct: 673 ---DDVPGTDFAWTVNT-TPWNNYTFRVIAVNKVGRSLPSGHSDVCTTESSVPYKNPDNL 728

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRI 951
            G G    +L I W PL +   NAP ++Y+++WR+     E+ S  ++++      V  +
Sbjct: 729 EGEGTTPTNLVIKWRPLAQVDHNAPGLHYRVYWRRDIPGAEWNSADVRDWRQSSYTVEGL 788

Query: 952 PSEFYYTEYEVKVQAINDVG 971
           P+   +T Y VKV A+ND G
Sbjct: 789 PT---FTRYSVKVVALNDRG 805


>gi|354465594|ref|XP_003495264.1| PREDICTED: contactin-3, partial [Cricetulus griseus]
          Length = 712

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/492 (32%), Positives = 242/492 (49%), Gaps = 17/492 (3%)

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           +P++   + D  +  +  L W C A G P  +Y W +NG+ L  E       +R  I++ 
Sbjct: 1   KPHWVQLIRDVEIAVEDSLYWECRASGKPKPSYRWLKNGDALVLE-------ERIQIENG 53

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F + P++       G  V 
Sbjct: 54  ALTISNLN-VTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNPMKKLVQVQVGSLVI 112

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
           + C P A+P+    WKK   ++    R     +G L I  V++ D+G Y+CTA N  G  
Sbjct: 113 LDCKPRASPRALSFWKKGDTMVREQSRISFLNDGGLKILNVTKADAGTYTCTAENQFGKA 172

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMD 726
                L+V   P+     P  + +A   ++ L C    + LLD+ + W  NG       D
Sbjct: 173 NGTTHLVVTE-PTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKD 231

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
            +  E    +  G L+ I N     +G+Y C+V++ V  +S+   +IV G PG P  V+V
Sbjct: 232 GSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKV 290

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            E+  T+A + WT+G  +  P+  Y + ART ++  W  V+   + + +D  T R    +
Sbjct: 291 DEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQTVT--TVPEVIDGKT-RTATVV 347

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
           E  L PW  YEF+V+A N++G GEPS PS +  T    P  APS + GGGG   +L I+W
Sbjct: 348 E--LNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVITW 405

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           +P+P E QN     Y + +R    T +    +    N    V R  S   ++ YEVKV  
Sbjct: 406 DPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGV 464

Query: 967 INDVGPGPESEV 978
            N+ G GP S V
Sbjct: 465 YNNKGEGPFSPV 476



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 146/596 (24%), Positives = 220/596 (36%), Gaps = 75/596 (12%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  EC A G P PSY W + G  L      +  N  LTI N+ V D G + C A N  
Sbjct: 17  DSLYWECRASGKPKPSYRWLKNGDALVLEERIQIENGALTISNLNVTDSGMFQCIAENKH 76

Query: 475 SALESSVTISIQAE-PNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNS 531
             + SS  + + A  P+F+     K +  Q    +   C+    P     W +       
Sbjct: 77  GLIYSSAELKVVASAPDFSRNPMKKLVQVQVGSLVILDCKPRASPRALSFWKKG------ 130

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
           +T+  E     F+ D  L I  +  + D   Y C A+NQ      +  L V+T       
Sbjct: 131 DTMVREQSRISFLNDGGLKILNVT-KADAGTYTCTAENQFGKANGTTHL-VVTEPTRIIL 188

Query: 592 RPLESETYAGEGGNVTIFCNPEAAP--KPKFVW---------KKDGNIIGSGGRRKIFEN 640
            P   +   GE  +V + C  +  P     F W         KKDG+     G      +
Sbjct: 189 APSNMDVAVGE--SVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSS---S 243

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G+L+I  +    SG Y C          S   LIV   P   E +  K+        QL 
Sbjct: 244 GDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDEITDTTAQLS 301

Query: 701 CSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE-- 756
            +  T+    V    +       +G   +  +  P + IDG     T        EYE  
Sbjct: 302 WTEGTDSHSPVISYAVQARTPFSVGWQTVTTV--PEV-IDGKTRTATVVELNPWVEYEFR 358

Query: 757 CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TD 800
            V  + +G         K+ T+       P  + GG       ++   I W        +
Sbjct: 359 VVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGG----SRSELVITWDPVPEELQN 414

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
           G   G  +  ++ +  T W      +   V   +  RY  R E+     +VP+S YE KV
Sbjct: 415 GGGFGY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IVPFSPYEVKV 462

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
              N  G G P SP     +  ++P  APSRI        ++ +SW  +P +  N   + 
Sbjct: 463 GVYNNKGEG-PFSPVTTVFSAEEEPTVAPSRISAQSLSSSEIEVSWNTIPWKLSNGHLLG 521

Query: 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
           Y++ +      E  S  +K  GN    V++ + S   YYT     V+A N  G GP
Sbjct: 522 YEVRYWNNGGEEESSSKMKVAGNQTSTVLQGLKSNLAYYT----AVRAYNSAGAGP 573



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 118/308 (38%), Gaps = 41/308 (13%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCK 275
           C A G P PSY W K     D LV        ++R  +  G L I++   V D G + C 
Sbjct: 23  CRASGKPKPSYRWLKNG---DALVL-------EERIQIENGALTISN-LNVTDSGMFQCI 71

Query: 276 ASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCD-PPTNYPGVNYYWARDY 334
           A NK G I S +         +F+     ++     G  +  D  P   P    +W +  
Sbjct: 72  AENKHGLIYSSAELKVVASAPDFSRNPMKKLVQVQVGSLVILDCKPRASPRALSFWKKG- 130

Query: 335 FPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF 394
               V E  R+    DG L    + + DAG Y+C  +++      NG    +   P    
Sbjct: 131 -DTMVREQSRISFLNDGGLKILNVTKADAGTYTCTAENQFGKA--NGTTHLVVTEPT--- 184

Query: 395 QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS--YNWTRRGSPLPRNAYFENFNRI 452
           + +  P+N           G+ V L C     P+    + W   G+         +F ++
Sbjct: 185 RIILAPSNMDVAV------GESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKV 238

Query: 453 -------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP----NFTIPLTDKHMD 501
                  L I N++++  G+Y+C       ++ S+  + ++  P    N  +   D+  D
Sbjct: 239 GGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKV---DEITD 295

Query: 502 NQADLTWT 509
             A L+WT
Sbjct: 296 TTAQLSWT 303


>gi|347964368|ref|XP_003437079.1| AGAP000720-PB [Anopheles gambiae str. PEST]
 gi|333467499|gb|EGK96582.1| AGAP000720-PB [Anopheles gambiae str. PEST]
          Length = 1271

 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 218/800 (27%), Positives = 338/800 (42%), Gaps = 51/800 (6%)

Query: 190 PYFIKQP--TDVVFDLSKRSILND-ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  IKQP   +++F ++++   +    + C A G P P Y W K      +      D  
Sbjct: 39  PRIIKQPPPDEMLFQVAQQGESDKPFLIECEAEGEPTPKYRWIKNG---KKFEWQTYD-- 93

Query: 247 SDKRFTLSG-GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
            D+     G G L+I  PR  ED G Y C A N+ G+  S SV +    +  F    +P+
Sbjct: 94  -DRMSQQPGRGTLVITSPRD-EDLGQYQCFAENEHGTATSNSVFVRKAELNSFK-DGSPQ 150

Query: 306 IGNQNWGK--AMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSALEQI 361
               + GK   + C PP  +P  N YW        +    + R+ +  +G L+FS + + 
Sbjct: 151 TLQADEGKPFKLVCQPPDGWPKPNVYWMIQNMDGGIRSINNSRMTLDPEGNLWFSNVTRD 210

Query: 362 DAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPKAGD 415
           D  N   Y+C   S      + G    L+V     +  Q + P    +     E    G 
Sbjct: 211 DESNDFFYACAASSVFRSEYKIGNRVLLQVKQTGISAAQNRHPPQRQYVSRKNEVALKGK 270

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASND 473
           ++ L C+  G P+P   WT+ G  +  N   +  N+ + L I  V  ED G Y C  SN 
Sbjct: 271 QIELFCIYGGTPLPETVWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNG 330

Query: 474 RSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
               +S S+ +++ A P FT+     +        + CEA G P     W  NG+ ++  
Sbjct: 331 VGQADSYSINLAVNAVPYFTVEPEIVNAAEGETAEFKCEAAGNPKPNIMWIHNGKQIDVS 390

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
               +   R  +  + + I  L  + D   Y C A N L   Y    L VL L P     
Sbjct: 391 ----QGNARRIVGSSSIYISKLQ-KSDTGNYGCNATNSLGYVYKDVYLNVLALAPEITDP 445

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDD 652
           P     +  +  NVT+ C    APKP+  W ++   + +GGR +   +G+L I  V  DD
Sbjct: 446 P--KREFTVDQRNVTMTCRVFGAPKPQVKWLRNDREL-TGGRYQTMPSGDLFIRDVKFDD 502

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   + G LIV    +     P      A   +  RC+A  +  L++ 
Sbjct: 503 AGEYTCHAVNNLGSKSASGELIVKER-TVINDPPQDYEAEAGTTVTFRCNAIADSSLELT 561

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
             W   G  I   D  E +   I      L I+     D G Y C+ ++ + ++    T+
Sbjct: 562 IEWLTKGEII---DF-ENQPRFIRTSDNSLMISKTIELDTGTYTCLARTDLDEVMANATL 617

Query: 773 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
            V   P  P  +  V      A I+W     N  PI +Y I   T++    ++V      
Sbjct: 618 TVMDRPN-PPTLTRVNCKGKVAQIEWISNGDNRSPILNYIIEYNTSFTPDTYDVLS---- 672

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              D   G   A   N   PW+ Y F+VIA N++G   PS  S    T +  PY+ P  +
Sbjct: 673 ---DDVPGTDFAWTVNT-TPWNNYTFRVIAVNKVGRSLPSGHSDVCTTESSVPYKNPDNL 728

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRI 951
            G G    +L I W PL +   NAP ++Y+++WR+     E+ S  ++++      V  +
Sbjct: 729 EGEGTTPTNLVIKWRPLAQVDHNAPGLHYRVYWRRDIPGAEWNSADVRDWRQSSYTVEGL 788

Query: 952 PSEFYYTEYEVKVQAINDVG 971
           P+   +T Y VKV A+ND G
Sbjct: 789 PT---FTRYSVKVVALNDRG 805


>gi|432866114|ref|XP_004070705.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Oryzias latipes]
          Length = 1245

 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 214/807 (26%), Positives = 361/807 (44%), Gaps = 55/807 (6%)

Query: 190 PYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  ++QP  +V       I+    N +T++C A G P P+Y+W K+   +D  ++N+   
Sbjct: 25  PLEVEQPPTIVAHSETPVIVLPLDNSVTITCQARGNPPPTYKWTKDG--KDVTLSNIASI 82

Query: 246 LSDKRFTLSGGNLIINDP--RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
            SD     + G L  +    RQVE  G Y C ASN+ G+ ++  +++    + +F  +  
Sbjct: 83  ASDP----TSGTLRFHSMPLRQVE--GKYKCFASNQLGTAMTVDIEIIVSALPKFPRETI 136

Query: 304 PE-IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQI 361
           P  I N+     + C+PP        YW        +++DKRV +  DG LYFS AL++ 
Sbjct: 137 PPVIVNEGESVILECNPPEAVAPRQLYWMTIGL-EHIKQDKRVSMGTDGNLYFSNALQRD 195

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA---GDKVR 418
              +Y C+       T        L V   S F   + P+    +  +  K    G++++
Sbjct: 196 SRQDYCCSAAFPRIRTMVQKSPMALVVVKSSEFIT-RAPSMLLPSGVQTEKVLMKGEELQ 254

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           LEC+  G P P   W + G  LP  A   NFN+ LT+  V+  DQG Y+C+ASN      
Sbjct: 255 LECITAGLPTPDVTWMKMGEKLPDQAKLSNFNKTLTVSAVEETDQGRYMCKASNSAGETV 314

Query: 479 SSVTISIQAEPNFT-IPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
               + ++  P +   P   +     +D+   C   G P    +W RNGEL   ++    
Sbjct: 315 HYFHVIVEEPPVWLGDPPQGQITPVGSDVHIKCSVGGKPPPDITWRRNGELFRDDS---- 370

Query: 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE 597
           + ++  + D V  + +    +D  +YQC A N      ++  + V++  P    + ++ E
Sbjct: 371 ENNKRVLDDTV--VLHKAKSQDSGVYQCEASNPHGRILANINILVMSKPPQILTKDVQ-E 427

Query: 598 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIY 656
                G N+ I C+  ++P     W K+  +I +G R   F+N  +L I      DSG Y
Sbjct: 428 YAVILGDNIVINCSVFSSPPASISWIKEEAVI-TGERFSTFDNNQSLKIINAEESDSGKY 486

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-- 714
            C   N  G   S   L+ +  P+     P    I    + +L C    ++ L+ +++  
Sbjct: 487 ECVVKNTEGTS-SITALLDVKDPTKIVSPPENKQIIIGTSAKLVCKVTYDKSLEGSFVME 545

Query: 715 WTHNGVRIGNMDLNELETPNINIDGGL-LEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           W  +G  I    L   E  +  I G   L+I N +  D G Y C+ ++++ ++     +I
Sbjct: 546 WRKDGEEI----LLSEENSSRYIRGDHNLQIMNVNLRDQGMYTCIARTSLDEVRATALII 601

Query: 774 VEGPPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYKIIARTN-WNSTWFNVSEHVI 831
           V   P  P  ++++E+  + +  I W  G+ +   +T + +    N W    +       
Sbjct: 602 VLDVPDAPERLKIIEIKDSRNIVISWKPGSDHNSSVTEFVVEYEENQWEPGGW------- 654

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
            KE+ R  G  +A+ E  L     Y+F+V A N +G G PS PS ++NT    P + P  
Sbjct: 655 -KELKRVPG-NQATAELALYGNLRYQFRVYAVNAIGPGPPSEPSERHNTDPTVPDRNPEN 712

Query: 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 951
           I   G     + ISW+PL   + N P + YK+ +R+    +  +E L +  +    V   
Sbjct: 713 IKIQGHIPYQMEISWDPLLPTESNGPGLEYKVSYRRLKVEDAWTEYLVQRPSY--VVNGT 770

Query: 952 PSEFYYTEYEVKVQAINDVGPGPESEV 978
           P+   +  YE+KVQA N  G  PE +V
Sbjct: 771 PA---FAPYEIKVQARNSFGWAPEPKV 794


>gi|1305527|gb|AAA99159.1| L1-like cell adhesion molecule antigen E587 [Carassius auratus]
          Length = 1232

 Score =  243 bits (619), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 215/805 (26%), Positives = 354/805 (43%), Gaps = 75/805 (9%)

Query: 194 KQPTDVVFDLSKRSI-LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT 252
           + PT  V  +S  +  L+D+ L+C A G P PS+ W K             D    KR  
Sbjct: 13  QAPTITVQPVSHTAFSLDDVILACEASGDPAPSFRWVK-------------DGKEFKREL 59

Query: 253 LSGGNLIINDPRQVED-RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW 311
           LS G L   D  ++   +GSY C   +  G+ +S+  QL    I     ++  +  +   
Sbjct: 60  LSSGTLTAEDKEELHPIQGSYRCYVMS-LGTAVSDLAQLITEPIPTLAKEKRQKTRSFEE 118

Query: 312 GKA--MFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSC 368
           G +  ++C+PP +      +W  D     +  ++RV  S DG LYF+ L   D+  +Y+C
Sbjct: 119 GDSAVLYCNPPKSSVTPKIHWM-DMHWRHIPLNERVTTSLDGNLYFANLLVNDSREDYTC 177

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNF-----QQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
           N     +          + V P ++       QL+ P     ++      G  + LEC+ 
Sbjct: 178 NAHIINASVILPKERISISVTPSNSVLKNRRPQLQKPAGSHSSY--LVLRGQTLTLECIP 235

Query: 424 FGYPVPSYNWTRRGSPL-PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G P P   W R  SPL P    +  + R L I +V   D GEY C A N + +++    
Sbjct: 236 EGLPTPEVQWERMDSPLSPARVRWLKYKRWLQIESVSEADDGEYTCTAQNSQGSVKHHYA 295

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD-- 540
           ++++A P +T    +        +   C+A G+P    +W  NG        P+   D  
Sbjct: 296 VTVEAAPYWTRRPENHLYAPGETVRLDCQAEGIPTPNITWSMNG-------APIAGTDPD 348

Query: 541 -RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS-FKKRPLESET 598
            R  +    L +  +    D A+Y   A N+      +  + V+ L P    +  L+ E 
Sbjct: 349 PRRHVSSGTLILTDVQIS-DTAVYHVEATNKHGNILINTHVHVVELPPQILTEDDLKYE- 406

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-----GRRKIFENGNLLISPVSRDDS 653
            A EG  V + C    +P+PK  W+    I  SG      +     +GNL IS VS +DS
Sbjct: 407 -ATEGQTVLLQCRTFGSPQPKVDWQ----ITNSGPALANAKMSQTSDGNLQISDVSEEDS 461

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
            +Y+C+ +  + M  S   L+VL+     +  P  + +    +  L+C    + +L    
Sbjct: 462 SMYTCSVSTSN-MSIS-AELVVLNRTKIVDP-PQDLRVLRGDDAVLQCRYTVDHMLKQPT 518

Query: 714 I-WTHNGVRIGNM--DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           I W  +  +I +   D    E+P+     G L+IT+    D+G Y C + + +  +S   
Sbjct: 519 IQWKKDKHKITSSANDDKYTESPD-----GSLKITDVQMEDSGIYSCEISTKLDSVSATG 573

Query: 771 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 830
           +++V   PG P  +++ E  + S T+ W  GA N  PI+ Y I  +   N    +  E+ 
Sbjct: 574 SIVVLDKPGSPHSLELSEKKERSVTLSWMPGAENNSPISEYVIERKEKQNPGKGHWEEY- 632

Query: 831 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
                 R   +    +E  L P+STY F+V   N +G  EPS PS  Y+TPA KP   P 
Sbjct: 633 ------RRVPQDITHLEIHLQPYSTYHFRVRGVNGIGMSEPSPPSESYSTPAAKPDMNPE 686

Query: 891 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 950
            +         L I+W+ L + + N P   YKI+WR++ D+ +    ++   +    +V 
Sbjct: 687 NVTSVSTDSNSLVITWQELEQRQFNGPGFKYKIYWRQEGDSHW----MESSASNPPFIVE 742

Query: 951 IPSEFYYTEYEVKVQAINDVGPGPE 975
            P  F    +++KVQA+N++G GPE
Sbjct: 743 GPGTF--IPFQIKVQAVNELGAGPE 765



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 127/323 (39%), Gaps = 60/323 (18%)

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG-----ELLNSETLPLEDQ 539
           ++  P  T+        +  D+   CEA G P  ++ W ++G     ELL+S TL  ED+
Sbjct: 11  LKQAPTITVQPVSHTAFSLDDVILACEASGDPAPSFRWVKDGKEFKRELLSSGTLTAEDK 70

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           +             L+P +    Y+C   + L T  S     +    P+  K   +    
Sbjct: 71  EE------------LHPIQ--GSYRCYVMS-LGTAVSDLAQLITEPIPTLAKEKRQKTRS 115

Query: 600 AGEGGNVTIFCN-PEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNL----LISPVSRDDS 653
             EG +  ++CN P+++  PK  W       I    R     +GNL    L+   SR+D 
Sbjct: 116 FEEGDSAVLYCNPPKSSVTPKIHWMDMHWRHIPLNERVTTSLDGNLYFANLLVNDSRED- 174

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR--CSAHTEELLDV 711
             Y+C   N H ++ S    ++L        + P  ++  +R  QL+    +H+  L+  
Sbjct: 175 --YTC---NAHIINAS----VILPKERISISVTPSNSVLKNRRPQLQKPAGSHSSYLVLR 225

Query: 712 AYIWTHNGVRIGNMDLNELETPNIN---IDGGL-------------LEITNASFADAGEY 755
               T   +  G      L TP +    +D  L             L+I + S AD GEY
Sbjct: 226 GQTLTLECIPEG------LPTPEVQWERMDSPLSPARVRWLKYKRWLQIESVSEADDGEY 279

Query: 756 ECVVKSTVGKISTKTTVIVEGPP 778
            C  +++ G +     V VE  P
Sbjct: 280 TCTAQNSQGSVKHHYAVTVEAAP 302


>gi|334322024|ref|XP_001371400.2| PREDICTED: neurofascin-like [Monodelphis domestica]
          Length = 1188

 Score =  243 bits (619), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 224/853 (26%), Positives = 353/853 (41%), Gaps = 118/853 (13%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS++W +         +   +  
Sbjct: 27  PLDLSQPPTITKQSVKNYIVDPRDNILIECEAKGNPTPSFQWTRN--------SRFFNVA 78

Query: 247 SDKRFTL--SGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEF 298
            D R ++    G L+I+     R  E  G Y C A NKFG+ +S  + L         + 
Sbjct: 79  KDPRVSMLRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIFLQVSKSPLWPKE 138

Query: 299 NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSAL 358
           NL   P +  +     + C+PP   P    +W        + +DKRV    +G LYFS +
Sbjct: 139 NLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPINQDKRVSQGQNGDLYFSNV 195

Query: 359 EQIDAG-NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN--------------- 402
              DA  +YSCN +   + T +    F LKV  +         N+               
Sbjct: 196 MLQDAKTDYSCNARFHFTHTIQQKNPFILKVLTNHAHNDSSLRNHTDMYSARGVAERTPS 255

Query: 403 --FP--KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR-NAYFENFNRILTIPN 457
             +P   +  +    G  + LEC+A G P P   W ++G  LP     FENFN+ L I N
Sbjct: 256 FMYPLGTSSSQMVLRGMDLLLECIASGVPAPDIAWYKKGGDLPAGKVKFENFNKALRITN 315

Query: 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
           V  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P 
Sbjct: 316 VSEEDSGEYFCLASNRMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPK 375

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD-----PAMYQCRAKNQLK 572
            T  W  NG+ L  E  P  +  R    D ++        RD      A+YQC A N   
Sbjct: 376 PTVQWLVNGDPL--EAAP-PNPSREVAGDTIIF-------RDTQIGSSAVYQCNASNDHG 425

Query: 573 TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS- 631
              ++A + VL + P     P              + C    +P P   W K+G   GS 
Sbjct: 426 YLLANAFVSVLDVPPRMLS-PRNQLIKVIHYNRTRLDCPFFGSPIPTLRWFKNGQ--GSN 482

Query: 632 --GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
             GG  ++ ENG+L ++   ++D GIY+C ATN+ G  E++ RL V   P+   ++P   
Sbjct: 483 LDGGNYQVHENGSLEMAMARKEDQGIYTCVATNILGKAENQVRLEV-KDPTRITRVPEDQ 541

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNA 747
            +    N+ L C    +  L +   W  +   + IGN    E ++         L I   
Sbjct: 542 VVKRGTNVVLECRVKHDPTLKLTVNWLKDDEPLYIGNRMKKEEDS---------LTIFGV 592

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGP---------------PGLPGGVQVVEVHKT 792
           +  D G Y C+  + + +   K  + V                  P  P  +++ ++ + 
Sbjct: 593 ADRDQGSYTCMASTELDRDIAKAYLTVLAAQVVPTNRMAPLPKERPDPPRDLELTDLEER 652

Query: 793 SATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           S  + W  G  N  PIT Y I    +      W + S+H          G   +++   L
Sbjct: 653 SVRLTWIPGDDNNSPITEYIIQFEEDQFQPGVWHSHSKH---------PGSVNSAVLQ-L 702

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y+F+VIA N++G   PS PS +Y T    P   P  + G G +  ++ I+W P+ 
Sbjct: 703 SPYVNYQFRVIAVNDVGSSHPSLPSERYRTSGAPPESNPGDVKGAGSRKNNMEITWTPMN 762

Query: 911 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI-----AVVRIPSEFYYTEYEVKVQ 965
                 PN+ Y + WR++       E  + + N  +      VV+ P    Y  YE++VQ
Sbjct: 763 ATSAFGPNLRYIVKWRRR-------EGRESWNNATVWGSRYTVVQTP---VYVPYEIRVQ 812

Query: 966 AINDVGPGPESEV 978
           A ND G GPE + 
Sbjct: 813 AENDFGKGPEPDT 825


>gi|348526542|ref|XP_003450778.1| PREDICTED: neuronal cell adhesion molecule-like [Oreochromis
            niloticus]
          Length = 1508

 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 232/819 (28%), Positives = 356/819 (43%), Gaps = 69/819 (8%)

Query: 180  IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
            +E P  +P+ P  I Q P D +FD  +     +I + C A G P+PS+ W +     D  
Sbjct: 239  LEVPLDLPQPPTIILQSPKDYIFDPRE-----NIVIHCEAKGKPHPSFSWTRNGTHFDVE 293

Query: 235  QDRLVANLIDPLSDKRFTLSGGNLIIN--DPRQVEDRGSYHCKASNKFGSIISESVQLAF 292
            +D  V  L+ P S        G L+I+    R     G+Y C A+N+ G+ +S+S+ +  
Sbjct: 294  KDSKV--LMKPGS--------GTLVIDISSERAEAYEGTYQCIANNEHGTAVSDSIVIRQ 343

Query: 293  GFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
                 ++ +R   I  Q     +  C PP   P    +W  + F      DKRV  + +G
Sbjct: 344  SRSPLWSKERNEAIMVQKGVSLVLQCRPPAGLPPPVIFWMDNNFQKL-PLDKRVSQALNG 402

Query: 352  ALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLK--FPNNFPKTFP 408
             LYFS  L +    +Y C  +   + T +      + V   S   + +  F      T  
Sbjct: 403  DLYFSNVLPEDTRSDYICYARFPHTQTIQQKQPISVTVLDSSPEGERRPGFMLPLGTTST 462

Query: 409  EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYI 467
            +    G  + LEC+A G P P  +W + G  LP N   + NF + L I +V   D G Y 
Sbjct: 463  KMVLRGQTLELECIAEGLPTPDISWQKEGGELPSNRVSYHNFKKTLKISDVNENDAGNYR 522

Query: 468  CRASNDRSALESSVTISIQAEPNF-TIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
            C A+N+   +  ++ ++++A P + +IP       N+  +  TC   G P     WF NG
Sbjct: 523  CVATNNLGTIHHTIKVTVKAAPFWVSIPRNLILAPNETGV-LTCRVNGEPKPRIDWFVNG 581

Query: 527  ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
              +  E  P ED  R    D V+     +     A+YQC A N+     ++A + VL   
Sbjct: 582  --IPIENTP-EDPSRKVEDDTVILSNVQSGSS--AVYQCNASNEFGYLLANAFVSVLAEP 636

Query: 587  PSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLL 644
            P     P  ++ Y         + C    +P P   W KD  I I +     I ENG L 
Sbjct: 637  PRVLTPP--NQVYQVITNSPALLHCASFGSPIPTITWFKDSQISIRNTDPYVIHENGTLE 694

Query: 645  ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
            I+     +SG Y+C ATN  G+ E+   L V   P+   + P    +    +    C   
Sbjct: 695  INVAQPLNSGKYTCIATNNLGIKENHVFLEVKE-PTRILKQPEYKVVQRGMSAVFECKVK 753

Query: 705  TEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
             +  L     W          D  EL +     +D   L I + +  D G Y C++ +T+
Sbjct: 754  HDPSLIPTMTWLK--------DRGELPDDERFEVDADSLTIRDVTDDDKGTYTCIMNTTL 805

Query: 764  GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNS 821
             + S    + V   P  P  +++ +  + S  + WT G  N  PI  + I      +   
Sbjct: 806  DQDSASAMLTVVEKPDPPTDLELTDQTERSVQLTWTPGDENNSPIEKFVIQYGDLLHQPG 865

Query: 822  TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
             W N++E V G            + +  L P+  Y F+V+A N +GY EPS  S QY T 
Sbjct: 866  VWTNLTE-VPGTST---------TAQLHLSPYVYYSFRVLAKNRVGYSEPSQSSRQYRTN 915

Query: 882  ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKE 940
               P + PS + G G + G+L ISW PL   + N P + YK+ WR+K+ + E+ ++ +  
Sbjct: 916  PAAPDENPSGVQGVGTEPGNLVISWTPLTGLQSNGPGLEYKVQWRQKDVEKEWSAQNV-- 973

Query: 941  YGNVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGPESEV 978
              NV   VV   P+   Y  YE+KVQA ND G GPE EV
Sbjct: 974  -ANVSQWVVSGTPT---YVPYEIKVQAFNDYGVGPEPEV 1008



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 151/687 (21%), Positives = 254/687 (36%), Gaps = 127/687 (18%)

Query: 346  FVSYDGALYFSALEQIDAGNYSC-------NVQSKVSDTGRNGPFFPLKVFPHSNFQQLK 398
            + ++   L  S + + DAGNY C        +   +  T +  PF+              
Sbjct: 501  YHNFKKTLKISDVNENDAGNYRCVATNNLGTIHHTIKVTVKAAPFW-------------- 546

Query: 399  FPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTI 455
               + P+    AP   +   L C   G P P  +W   G P+   P +   +  +  + +
Sbjct: 547  --VSIPRNLILAPN--ETGVLTCRVNGEPKPRIDWFVNGIPIENTPEDPSRKVEDDTVIL 602

Query: 456  PNVKVEDQGEYICRASNDRSALESSVTISIQAEPN--FTIPLTDKHMDNQADLTWTCEAF 513
             NV+      Y C ASN+   L ++  +S+ AEP    T P     +   +     C +F
Sbjct: 603  SNVQSGSSAVYQCNASNEFGYLLANAFVSVLAEPPRVLTPPNQVYQVITNSPALLHCASF 662

Query: 514  GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLK 572
            G P  T +WF++ ++       + + D Y I +N  L I    P  +   Y C A N L 
Sbjct: 663  GSPIPTITWFKDSQI------SIRNTDPYVIHENGTLEINVAQP-LNSGKYTCIATNNLG 715

Query: 573  TRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKD 625
             + +   L V     +  +P +K            G +    C  +  P   P   W KD
Sbjct: 716  IKENHVFLEVKEPTRILKQPEYK--------VVQRGMSAVFECKVKHDPSLIPTMTWLKD 767

Query: 626  GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 685
               +    R ++ +  +L I  V+ DD G Y+C        D +   L V+  P     L
Sbjct: 768  RGELPDDERFEV-DADSLTIRDVTDDDKGTYTCIMNTTLDQDSASAMLTVVEKPDPPTDL 826

Query: 686  PPKITIAAHRNLQLRCSAHTE-------------ELLDVAYIWTHNGVRIGNMDLNELET 732
              ++T    R++QL  +   E             +LL    +WT           N  E 
Sbjct: 827  --ELTDQTERSVQLTWTPGDENNSPIEKFVIQYGDLLHQPGVWT-----------NLTEV 873

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVV 787
            P  +    L       ++    +  + K+ VG     + S +       P   P GVQ V
Sbjct: 874  PGTSTTAQLHLSPYVYYS----FRVLAKNRVGYSEPSQSSRQYRTNPAAPDENPSGVQGV 929

Query: 788  EVHKTSATIQWT--DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR-YTGRKEA 844
                 +  I WT   G  +  P   YK+  R                K+V++ ++ +  A
Sbjct: 930  GTEPGNLVISWTPLTGLQSNGPGLEYKVQWRQ---------------KDVEKEWSAQNVA 974

Query: 845  SIENVLVP----WSTYEFKVIAGNELGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGG 897
            ++   +V     +  YE KV A N+ G G    P P+     +  D P  AP  I     
Sbjct: 975  NVSQWVVSGTPTYVPYEIKVQAFNDYGVG----PEPEVAIGYSGEDLPLSAPESIQVMVH 1030

Query: 898  KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-------DTEFQSETLKEYGNVGIAVVR 950
                  + WEP+           YK+++R+K+       +T+ + + L   GN      R
Sbjct: 1031 NSTLAEVHWEPISPPSVRGKLQGYKVYYRRKHGLHETEEETDQEMQVLTFSGNRSEG--R 1088

Query: 951  IPSEFYYTEYEVKVQAINDVGPGPESE 977
            +P    Y+ Y + ++ +N+ G GP S+
Sbjct: 1089 LPGLQPYSVYSLSIRVLNNKGEGPSSQ 1115


>gi|47228830|emb|CAG07562.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 478

 Score =  242 bits (618), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 148/441 (33%), Positives = 216/441 (48%), Gaps = 22/441 (4%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F KQP  VVF L       ++  SC A G+P P Y W        +L  + I P   
Sbjct: 17  GPVFTKQPGSVVFPLQHGENRKEVVFSCEAQGHPAPFYRW--------KLNDSFIHPRPG 68

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIG 307
            R++L GGNL I+   + ED G Y C ASN FG+I+S    L   ++ +F   +R+P   
Sbjct: 69  SRYSLMGGNLHISRLNKDEDVGVYQCLASNSFGTIVSREASLHVAYLEDFKTHRRSPVRV 128

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   + + W  + +P+FV +D R FVS   G LY + +   D GNY
Sbjct: 129 REGQGVVLLCGPPPHSGELTFTWIFNEYPSFVTQDTRRFVSQKTGNLYIAKVVPSDVGNY 188

Query: 367 SCNVQSKVSDTGRNGPFFPL--KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V+ +   GP  PL  +V       + K    FP+  P A  +   V LEC A 
Sbjct: 189 TCVVTNTVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPVAKSS--TVTLECFAL 246

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+ +W R  G+   R       + +L IP  ++ED G Y C A N R        +
Sbjct: 247 GNPVPTISWRRADGASFGRKVDVNKASGVLEIPYFQIEDAGMYECVAENSRGRNSVKGKL 306

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           S  A P  +    D        L W C+A   P  +Y W +NGE L+        +DR  
Sbjct: 307 SFYAAPQLSEKPQDVQKTIDETLVWECKASAKPKPSYRWLKNGEPLD------HMEDRLQ 360

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
           + + VLTI  LN   D  MYQC A+N+    +++A+LRV+ + P F +  L+++T   +G
Sbjct: 361 VNNGVLTISSLNLA-DIGMYQCVAENRHGRVFTNAELRVIAIAPDFSQNLLKAQTLTRQG 419

Query: 604 GNVTIFCNPEAAPKPKFVWKK 624
           G+V I C P  +P+    W+K
Sbjct: 420 GDVLIECKPRMSPRGIISWRK 440



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 144/361 (39%), Gaps = 49/361 (13%)

Query: 484 SIQAEPNFT-----IPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           ++Q  P FT     +    +H +N+ ++ ++CEA G P   Y W  N   ++        
Sbjct: 13  AVQLGPVFTKQPGSVVFPLQHGENRKEVVFSCEAQGHPAPFYRWKLNDSFIHPRP----- 67

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESE 597
             RY +    L I  LN + D  +YQC A N   T  S  A L V  L+     R   S 
Sbjct: 68  GSRYSLMGGNLHISRLNKDEDVGVYQCLASNSFGTIVSREASLHVAYLEDFKTHR--RSP 125

Query: 598 TYAGEGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDS 653
               EG  V + C P   + +  F W   +  + +    RR + +  GNL I+ V   D 
Sbjct: 126 VRVREGQGVVLLCGPPPHSGELTFTWIFNEYPSFVTQDTRRFVSQKTGNLYIAKVVPSDV 185

Query: 654 GIYSCTATNVHGMDESKG-------RLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSA 703
           G Y+C  TN       +G       R+  + G   P    Q P  + +A    + L C A
Sbjct: 186 GNYTCVVTNTVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPVAKSSTVTLECFA 245

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
               +  +++    +G   G          ++N   G+LEI      DAG YECV +++ 
Sbjct: 246 LGNPVPTISW-RRADGASFG-------RKVDVNKASGVLEIPYFQIEDAGMYECVAENSR 297

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGAT-----------NGRPITHY 811
           G+ S K  +     P L    Q  +V KT   T+ W   A+           NG P+ H 
Sbjct: 298 GRNSVKGKLSFYAAPQLSEKPQ--DVQKTIDETLVWECKASAKPKPSYRWLKNGEPLDHM 355

Query: 812 K 812
           +
Sbjct: 356 E 356



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 149/388 (38%), Gaps = 57/388 (14%)

Query: 416 KVRLECVAFGYPVPSYNWTRRGS---PLPRNAYFENFNRILTIPNVKVEDQGEYICRASN 472
           +V   C A G+P P Y W    S   P P + Y      +      K ED G Y C ASN
Sbjct: 39  EVVFSCEAQGHPAPFYRWKLNDSFIHPRPGSRYSLMGGNLHISRLNKDEDVGVYQCLASN 98

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV----------PDVTYSW 522
               +       +  E +  +   +    ++       E  GV           ++T++W
Sbjct: 99  SFGTI-------VSREASLHVAYLEDFKTHRRSPVRVREGQGVVLLCGPPPHSGELTFTW 151

Query: 523 FRNGELLNSETLPLEDQDRYFIQDNV-LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ-- 579
             N       +   +D  R+  Q    L I  + P  D   Y C   N +    SS Q  
Sbjct: 152 IFN----EYPSFVTQDTRRFVSQKTGNLYIAKVVPS-DVGNYTCVVTNTVTK--SSVQGP 204

Query: 580 -----LRVLTLKPSFKKRPLESE----TYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNII 629
                LRV  +   ++ + +E +        +   VT+ C     P P   W++ DG   
Sbjct: 205 PTPLVLRVDGVMGEYEPK-IEVQFPEVVPVAKSSTVTLECFALGNPVPTISWRRADGASF 263

Query: 630 GSGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
           G    RK+  N   G L I     +D+G+Y C A N  G +  KG+L     P   E+ P
Sbjct: 264 G----RKVDVNKASGVLEIPYFQIEDAGMYECVAENSRGRNSVKGKLSFYAAPQLSEK-P 318

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
             +       L   C A  +     +Y W  NG  + +M+        + ++ G+L I++
Sbjct: 319 QDVQKTIDETLVWECKASAKP--KPSYRWLKNGEPLDHME------DRLQVNNGVLTISS 370

Query: 747 ASFADAGEYECVVKSTVGKISTKTTVIV 774
            + AD G Y+CV ++  G++ T   + V
Sbjct: 371 LNLADIGMYQCVAENRHGRVFTNAELRV 398



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 103/251 (41%), Gaps = 34/251 (13%)

Query: 453 LTIPNVKVEDQGEYICRASND--RSALESSVT--------ISIQAEPNFTIPLTDK-HMD 501
           L I  V   D G Y C  +N   +S+++   T        +  + EP   +   +   + 
Sbjct: 175 LYIAKVVPSDVGNYTCVVTNTVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPVA 234

Query: 502 NQADLTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
             + +T  C A G P  T SW R +G     +     D ++      VL I Y   E D 
Sbjct: 235 KSSTVTLECFALGNPVPTISWRRADGASFGRKV----DVNK---ASGVLEIPYFQIE-DA 286

Query: 561 AMYQC-----RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 615
            MY+C     R +N +K + S      L+ KP   ++ ++ ET   E       C   A 
Sbjct: 287 GMYECVAENSRGRNSVKGKLSFYAAPQLSEKPQDVQKTID-ETLVWE-------CKASAK 338

Query: 616 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           PKP + W K+G  +     R    NG L IS ++  D G+Y C A N HG   +   L V
Sbjct: 339 PKPSYRWLKNGEPLDHMEDRLQVNNGVLTISSLNLADIGMYQCVAENRHGRVFTNAELRV 398

Query: 676 LH-GPSYYEQL 685
           +   P + + L
Sbjct: 399 IAIAPDFSQNL 409


>gi|195049599|ref|XP_001992750.1| GH24930 [Drosophila grimshawi]
 gi|193893591|gb|EDV92457.1| GH24930 [Drosophila grimshawi]
          Length = 1298

 Score =  242 bits (617), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 207/804 (25%), Positives = 360/804 (44%), Gaps = 57/804 (7%)

Query: 190 PYFIKQP--TDVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P   KQP   +++F +++++  +D    + C A G P P Y W K     D         
Sbjct: 28  PRISKQPPTDELLFKVAQQNKESDKPFIIECEADGQPEPEYRWIKNGKPFDWQAY----- 82

Query: 246 LSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
             D R +     G+L+I  P+  ED G Y C ASN+FG   S SV +    +  F  + A
Sbjct: 83  --DNRMSRQPGRGSLVITSPKD-EDLGQYQCFASNEFGVATSNSVFVRKAELNAFKDEVA 139

Query: 304 PEI-GNQNWGKAMFCDPPTNYPGVNYYW-ARDYFPNFVEE--DKRVFVSYDGALYFSALE 359
             +  N+    ++ C+ P  +P     W  +    + ++   + R+ +  +G L+FS + 
Sbjct: 140 RSVEANEGDPFSLQCEAPDGWPKPTVNWLIQQSIGSGIKSINNSRMTLDPEGTLWFSNVT 199

Query: 360 QIDAGN---YSCNVQSKVSDTGR--NGPFFPLKVFPHSNFQQLKFPN-NFPKTFPEAPKA 413
           + DA +   Y+C+  S   +  +  N     +K    S  Q    P   +     E    
Sbjct: 200 REDASDDFYYACSATSVFRNEYKIGNKILLDVKQMGVSASQNRHPPKRQYVTRKNEVALR 259

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRAS 471
           G +V L C+  G P+P   W + G  +  + +    N+ + L I    + D G Y C  S
Sbjct: 260 GKRVELYCIYGGTPLPQTVWYKDGQRVQWSDHITQGNYGKSLVIRQANLNDAGTYNCDVS 319

Query: 472 NDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE-LL 529
           N     +S S+ + I A P FT     ++     ++ + C+A G P+ T  W  NG+ + 
Sbjct: 320 NGVGNAQSYSINLKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHPEPTIQWIHNGKPIA 379

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
            SE  P     R  + ++ + I  L  ++D   Y C A N L   Y    L V  L P  
Sbjct: 380 QSEPNP-----RRTVTNSYIKIVNL-VKKDTGNYGCNATNSLGYVYKDVYLNVQALPPEI 433

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
           ++ P     ++  G N+T+ C    APKP+  W+++ N + +GGR  +  +G+L I  V+
Sbjct: 434 QEPPRAE--FSVNGRNITMKCRVFGAPKPQVKWRQNNNWL-TGGRYTVLASGDLEIKDVA 490

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C A N  G   ++G L+V    +   Q P    +AA ++   RC+   +  L
Sbjct: 491 FADNGNYTCLAVNKFGNATAQGSLVVRER-TRITQEPQNYEVAAGQSATFRCNEAHDPNL 549

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769
           ++   W  +G    N+D  + E   +  +   L I      D+GEY CV ++ + + + +
Sbjct: 550 NLTIEWLKDG---QNIDF-DAEARFVKTNDNSLTIAKTMELDSGEYTCVARTELDEATAR 605

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSE 828
             +IV+  P  P  + +       A I W     N  PI HY I   T++  ++W    +
Sbjct: 606 ANLIVQDVPNAPKLIGIT-CQDDKAEISWEPQGDNRSPILHYTIQYNTSFTPASWDRAFD 664

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
            V   +          S    + PW+ Y ++VIA N++G   PS  S    T  + P++ 
Sbjct: 665 KVPSTDF---------SFVVQMSPWANYTYRVIAFNKIGQSPPSGHSDACTTQPNVPFKN 715

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIA 947
           P  + G G +  +L I W P+P  + NAPN  Y++ W++      ++++ + ++    + 
Sbjct: 716 PENVVGQGTEPNNLVIEWTPMPEIEHNAPNFQYRVSWKRDIPAAAWENKDIYDWRQSNLL 775

Query: 948 VVRIPSEFYYTEYEVKVQAINDVG 971
           +   P+   + +Y +KV AIN+ G
Sbjct: 776 IADQPT---FVKYHIKVVAINERG 796


>gi|348543836|ref|XP_003459388.1| PREDICTED: neurofascin-like [Oreochromis niloticus]
          Length = 1342

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 223/856 (26%), Positives = 366/856 (42%), Gaps = 88/856 (10%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILN---DITLSCYAGG 220
           L ++      +Q    IE P+  P+    +KQP  ++    K  I++   +I + C A G
Sbjct: 10  LTFMSLLLLLWQEAAPIEVPED-PKIQQDLKQPPTIMKQSVKNYIVDPRDNIIIECEAKG 68

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLII---NDPRQVEDRGSYHCK 275
            P P++ W        R      +   D R T+    G L I   +  R  +  G Y C 
Sbjct: 69  NPVPTFSW--------RRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF 120

Query: 276 ASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF 335
           A+N FG  +S  + L       +  +    +        +    P       + +  D  
Sbjct: 121 ATNDFGVSLSNKILLRVSKAPLWPKEVLEPVSVIEGSPLVLPCNPPPGLPPPFTFWMDSN 180

Query: 336 PNFVEEDKRVFVSYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPFFPLKVFPHSNF 394
            + + +DKRV +  +G LYFS +   DA  +YSC  +   + T +    + LKV  +   
Sbjct: 181 MSPIPQDKRVSMGLNGDLYFSNVLAQDANTDYSCKARFLFTHTIQEKNPYKLKVQTNRKV 240

Query: 395 QQLKFPNNFPKTFPEAPKA---GDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFENFN 450
            +   P     +  E+ K     +++ LEC+A G P P   W ++G  LP +   FENFN
Sbjct: 241 AE-STPTFLSPSGSESSKMVLRDEQLLLECIAAGLPTPIIKWFKKGGELPGQKVKFENFN 299

Query: 451 RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTC 510
           + L I +V  ED GEY+C A+N    +  S+ + ++A P + +  +D+ +  +      C
Sbjct: 300 KTLKIVSVSEEDAGEYVCMANNHLGTIRHSIFVQVKAAPYWLVKPSDQVLAPEETGRLIC 359

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQ 570
            A G P     W  NG+ + S      + +R  + D ++  R +      A+YQC A N+
Sbjct: 360 RANGNPKPHIEWLVNGQPIESSPT---NPNRQVLGDTII-FRSVQIGSS-AVYQCNASNE 414

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 630
                ++A + VL L P     P        +     + C    +P P+  W K+G   G
Sbjct: 415 HGYLLANAFVNVLDLPPRMLG-PKNQLIKVIKNNRTFLDCPFFGSPLPELRWFKNGQGSG 473

Query: 631 -SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
             GG+ +++ NG L I     +D G Y+C A+++ G  E++ RL V   P+   Q P   
Sbjct: 474 LDGGQYRVYINGTLEIKRAQAEDEGTYTCVASSILGKAENQVRLEVKE-PTRIIQAPEHQ 532

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHN------GVRIGNMDLNELETPNINIDGGLLE 743
           +       +  C   ++  L V+  W  +      G R+   D   L  PN+N       
Sbjct: 533 SAIRGSTARFTCRVTSDPSLPVSVAWMKDDKPLYLGWRLKKDD-ESLSIPNVN------- 584

Query: 744 ITNASFADAGEYECVVKSTVGKIST--KTTVIV---------------EGPPGLPGGVQV 786
                  D G Y C VKS + ++S   + TV+V                  P  P  + +
Sbjct: 585 -----EGDEGTYTCTVKSEIDQLSASARLTVLVCFCVSDTSKAMSCLSSARPDPPIDLDL 639

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEA 844
            +    S  + W  G  +  PIT + +      W    W N+S          Y G   +
Sbjct: 640 SDPAARSVRLTWIPGKDHRSPITEFLVQFEEDRWEPGRWQNLSS---------YPGDLNS 690

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
            I   L P+  Y+F+VIA N +G  +PS PSP+Y T    P   P  + G G +  ++ I
Sbjct: 691 VILQ-LAPFVNYQFRVIAINSVGQSDPSRPSPRYKTTGAAPDAIPKGLRGWGSRKDNMEI 749

Query: 905 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 962
           +WEPL   ++N PN++Y ++WR+K+  E       E+ NV     +  + +   Y  YE+
Sbjct: 750 TWEPLLDLERNGPNLHYIVWWRRKDVEE-------EWNNVTTLGAKHVVHNTEIYVPYEI 802

Query: 963 KVQAINDVGPGPESEV 978
           K+QA N+ G GPES +
Sbjct: 803 KIQARNEFGAGPESNM 818


>gi|47227361|emb|CAF96910.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1154

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 204/786 (25%), Positives = 334/786 (42%), Gaps = 57/786 (7%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRG 270
           + C A G P P + W K             DP  D R      SG  +I N+    E +G
Sbjct: 26  MKCEAKGNPEPQFRWTKN--------GQQFDPFLDPRLIKEEDSGTFVIPNNGNLTEYQG 77

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRA-PEIGNQNWGKAMFCDPPTNYPGVNYY 329
            Y C ASN  G+ IS  ++     + +F  +   P +  +     + C+PP   P +  Y
Sbjct: 78  IYRCFASNVLGTAISREIEFIVPNVPKFPKETIDPVVVEEGQPFVLKCNPPDGIPPLQIY 137

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSC-----NVQSKVSDTGRNGPF 383
           W        +E+D+RV  S +G LYFS A+++    +Y C      +++ V  T  +   
Sbjct: 138 WMTISL-QHIEQDERVSTSLNGDLYFSHAVDKDSRRDYCCFAAFPRIRTIVQKTAMSVIV 196

Query: 384 FPLK----VFPHSNFQQLKFPNNFPKTFPEAPKA-GDKVRLECVAFGYPVPSYNWTRRGS 438
              K       ++  Q+       P    EA    G+ + LEC+A G+P P   W + G 
Sbjct: 197 KTKKDASPEVANAILQRRPSIMTPPGGKSEARLVKGEDLNLECIAAGFPTPQVEWVKMGQ 256

Query: 439 PLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDK 498
            LP  A  E+  ++L +P V+ ED G+Y+C+A N         T++++  P +      +
Sbjct: 257 RLPTKATIESHGKLLFVPTVEQEDGGKYMCKAKNTLGEAVHYFTVTVEGPPEWVSEPESQ 316

Query: 499 HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 558
                +D+   C   G P  T +W  NG  L     P    +R  + D +  + +     
Sbjct: 317 LSMIGSDVLIKCSVSGTPQPTVTWRVNGNRLQDSPAP----NRRVLGDTI--VLHNTKPS 370

Query: 559 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 618
           D A+YQC A N+  T  S+A + ++   P       E  + A EG  V + C   ++P P
Sbjct: 371 DSAVYQCEASNRHGTLLSNANIMIMNFPPMILTENDEDYS-AVEGKRVMMHCKVFSSPSP 429

Query: 619 KFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677
              W KD       G R  + +NG L I    ++D+G Y+C A N  G   +   ++ + 
Sbjct: 430 TITWSKDDTSDSVDGPRFSVHDNGTLEIYRAEKEDAGPYTCFAKNTEG-SSAINAMLSVK 488

Query: 678 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNI 735
            P+   + P    I      Q  C A  ++    D   +W  +   I    +N  E    
Sbjct: 489 DPTRIVEPPEDSRILKGTTAQFSCLAEYDKSFSNDFEILWEKDDKEIA---VNYTENSRY 545

Query: 736 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 795
            ++ GLL+I N S  D G Y C+ ++ +        ++V   P  P  + + E    S  
Sbjct: 546 FVEDGLLQIVNVSHLDKGVYTCLARTPMDGDKATALLLVIDVPDAPQYLVLSEHKSKSVK 605

Query: 796 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG--KEVDRYTGRKEASIENVLVPW 853
           ++W  G  +    T + I          +  S+   G  KE+ R  G   ++I   L   
Sbjct: 606 LKWIPGDDHNSSTTEFII---------EYEESQREPGNWKELLRVPGNHNSAILK-LHGH 655

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
             Y F+V   N +G G  S P+ +Y TP   P + P  I        ++ I+WEPL   +
Sbjct: 656 VDYCFRVSGVNAVGRGPSSQPTERYRTPPAAPDKNPENIKIESHLPHEMDINWEPLLPIE 715

Query: 914 QNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
           QN P + YK+ +R+++ + ++Q   +K +  V   V   P+   +  YE+K+QA N  G 
Sbjct: 716 QNGPGLEYKVSYRRQDVEEDWQEHIVKRHSFV---VKNTPT---FVPYEIKIQARNHQGW 769

Query: 973 GPESEV 978
           GPE  +
Sbjct: 770 GPEPRI 775



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/392 (21%), Positives = 148/392 (37%), Gaps = 55/392 (14%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           D+ L C A G+P P  EW K           +   L  K    S G L+     + ED G
Sbjct: 234 DLNLECIAAGFPTPQVEWVK-----------MGQRLPTKATIESHGKLLFVPTVEQEDGG 282

Query: 271 SYHCKASNKFGSII---SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN 327
            Y CKA N  G  +   + +V+    ++ E   + +  IG+    K      P   P V 
Sbjct: 283 KYMCKAKNTLGEAVHYFTVTVEGPPEWVSEPESQLS-MIGSDVLIKCSVSGTPQ--PTVT 339

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
           +    +   +    ++RV       +     +  D+  Y C        + R+G      
Sbjct: 340 WRVNGNRLQDSPAPNRRVL---GDTIVLHNTKPSDSAVYQCEA------SNRHG-----T 385

Query: 388 VFPHSNFQQLKFPNNFPKTFPE-----APKAGDKVRLECVAFGYPVPSYNWTRRGSP--- 439
           +  ++N   + FP   P    E     +   G +V + C  F  P P+  W++  +    
Sbjct: 386 LLSNANIMIMNFP---PMILTENDEDYSAVEGKRVMMHCKVFSSPSPTITWSKDDTSDSV 442

Query: 440 -LPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDK 498
             PR +  +  N  L I   + ED G Y C A N   +   +  +S++       P  D 
Sbjct: 443 DGPRFSVHD--NGTLEIYRAEKEDAGPYTCFAKNTEGSSAINAMLSVKDPTRIVEPPEDS 500

Query: 499 HMDNQADLTWTCEAFGVPDVTYSWFRNGELL-----NSETLPLEDQDRYFIQDNVLTIRY 553
            +       ++C A    +   S+  + E+L         +   +  RYF++D +L I  
Sbjct: 501 RILKGTTAQFSCLA----EYDKSFSNDFEILWEKDDKEIAVNYTENSRYFVEDGLLQIVN 556

Query: 554 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           ++   D  +Y C A+  +    ++A L V+ +
Sbjct: 557 VS-HLDKGVYTCLARTPMDGDKATALLLVIDV 587



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 12/162 (7%)

Query: 208 ILNDITLSCYAGGYPNPSYEW-FKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           I +D+ + C   G P P+  W    + +QD        P  ++R     G+ I+    + 
Sbjct: 320 IGSDVLIKCSVSGTPQPTVTWRVNGNRLQD-------SPAPNRRVL---GDTIVLHNTKP 369

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            D   Y C+ASN+ G+++S +  +   F      +   +       + M      + P  
Sbjct: 370 SDSAVYQCEASNRHGTLLSNANIMIMNFPPMILTENDEDYSAVEGKRVMMHCKVFSSPSP 429

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
              W++D   + V +  R  V  +G L     E+ DAG Y+C
Sbjct: 430 TITWSKDDTSDSV-DGPRFSVHDNGTLEIYRAEKEDAGPYTC 470


>gi|348517086|ref|XP_003446066.1| PREDICTED: neural cell adhesion molecule L1-like [Oreochromis
            niloticus]
          Length = 1548

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 204/792 (25%), Positives = 355/792 (44%), Gaps = 70/792 (8%)

Query: 209  LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
            L D  L+C A G P P++ W K+          L    ++   TL G N  ++    +E 
Sbjct: 324  LEDFNLACEATGNPTPTFRWLKD--------GELFGSETEGSGTLRGDNSSLD---MLE- 371

Query: 269  RGSYHCKASNKFGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
             G Y C ASN  G+ ++++V++       + +  + R  E G+      + C+PP + P 
Sbjct: 372  -GEYRCYASNSLGTAMTQAVKVNVEPQPVLMKQQVMR--EQGDVGQSMVLSCNPPESSPP 428

Query: 326  VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPFF 384
             + +W      + +   +RV +  DG LYF+ L + D   +Y C+ Q + + T       
Sbjct: 429  PSIHWMNMNLMH-ITRSERVTIGLDGKLYFANLMESDKKKDYICHAQYREARTILPATAV 487

Query: 385  PLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLP- 441
             L V P ++      P  F         A  G+ V LEC+  G P P   W ++   L  
Sbjct: 488  SLSVKPSNSVAHGGKPEFFHHRNHSQISALKGNSVTLECLPKGLPTPKVEWKKKDGVLAD 547

Query: 442  RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
                  NF+R L   ++ ++D GEY C+ASN   ++  S T++++A P +     +    
Sbjct: 548  TTGQVINFDRWLHFDSITLDDDGEYECKASNAHGSITRSFTVTVEAAPYWVKEPQNLMYT 607

Query: 502  NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
                +   C+A GVP  + +W  NG+LL      ++++ R  +    L ++ +N   D A
Sbjct: 608  PGETVRLDCQADGVPRPSITWRINGQLLTE----VDEEPRRTVTGGTLIMKDVNI-GDTA 662

Query: 562  MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY---AGEGGNVTIFCNPEAAPKP 618
            +YQC AKN   +   +  L V+ L P      L  + +     +G +V + C    +P+P
Sbjct: 663  VYQCEAKNGHGSILLNTYLYVVELPPQI----LSPDGFIYNVTKGRDVALHCESFGSPRP 718

Query: 619  KFVWKKD--GNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 673
            +  W ++  G ++       R  I  NG L +S VS +DSG Y C+  N +    +K   
Sbjct: 719  RVTWDREDTGALLSDPLLYPRISILTNGTLKLSDVSHNDSGEYICSVQNTNISITAK--- 775

Query: 674  IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELET 732
            + +  PS     P  + +    +  L C   T+  L D   +W     + GN  L E   
Sbjct: 776  LDVFRPSEILTGPQAVRVVQGESAFLDCDVDTDPRLRDYQVVW-----KKGNRKLEETSV 830

Query: 733  PN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 790
             +    +    L++T+    D+ EY C V + V  +  + ++ V   P  P G+ +    
Sbjct: 831  DDKYTFLKNNTLKVTDVQLNDSTEYSCEVITKVDNVIAQGSITVVAKPDPPSGLTLSNAE 890

Query: 791  KTSATIQWTDGATNGRPITHYKIIARTNWNS-----TWFNVSEHVIGKEVDRYTGRKEAS 845
              S T+ W+ G ++  PIT + I AR  +++     TW         +E+ +  G     
Sbjct: 891  GVSVTLSWSPGLSHNSPITEFIIQAREEYHTEERKWTW---------EELKKVPGDFN-H 940

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            +E  L P+STY F+VIA NE+G    S+PS  ++TP   P   P+ +     + G L I+
Sbjct: 941  VELTLHPFSTYRFRVIAINEVGRSRHSNPSDHHSTPPAAPSINPTGVRSNSAEPGTLIIT 1000

Query: 906  WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
            W+ + +   N  +  Y++ WR+ + +     +    G V      + +   YT +E+KV+
Sbjct: 1001 WDEIDKRFHNGQDFQYEVLWREADGSNVNWNS----GRVRSPPFIVNNTGTYTPFEIKVR 1056

Query: 966  AINDVGPGPESE 977
            ++N +G GP+ E
Sbjct: 1057 SVNALGGGPDPE 1068


>gi|237858648|ref|NP_001153795.1| neurofascin isoform 7 precursor [Gallus gallus]
          Length = 1179

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 232/851 (27%), Positives = 369/851 (43%), Gaps = 93/851 (10%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH+L++          IE P  +P+ P   KQ   D + D       ++I + C A G P
Sbjct: 19  LHHLISA---------IEVPLDLPQPPTITKQSVKDYIVDPR-----DNIFIECEAKGNP 64

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKAS 277
            P++ W +             +   D + ++    G L+I+     R  +  G Y C A 
Sbjct: 65  VPTFSWTRN--------GKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEYQCFAR 116

Query: 278 NKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           N +G+ +S  + L       +  ++   I  ++    ++ C+PP   P    +W      
Sbjct: 117 NDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSSM- 175

Query: 337 NFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVF---PHS 392
             + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + LKV    PH+
Sbjct: 176 EPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 235

Query: 393 -----NFQQLKFPNNFPKTFP-----------EAPKAGDKVRLECVAFGYPVPSYNWTRR 436
                N   +       +T P           +    G  + LEC+A G P P   W ++
Sbjct: 236 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKK 295

Query: 437 GSPLPR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
           G  LP      ENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +    
Sbjct: 296 GGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP 355

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN 555
            +  +    D    C A G P  +  W  NGE +        +  R    D   TI + +
Sbjct: 356 QNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRD 409

Query: 556 PE-RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
            +    A+YQC A N+     ++A + VL + P     P        +     + C    
Sbjct: 410 TQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFG 468

Query: 615 APKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
           +P P   W K+G  N++  GG  K  ENG+L +S   ++D GIY+C ATN+ G  E++ R
Sbjct: 469 SPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVR 527

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNEL 730
           L V   P+   + P    +      +L C    +  L +   W  +   + IGN    E 
Sbjct: 528 LEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE- 585

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 790
                  D GL  I   +  D G+Y CV  + + K S K  + V   P  P  +++ ++ 
Sbjct: 586 -------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLERPDRPRDLELSDLA 637

Query: 791 KTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIEN 848
           + S  + W  G  N  PIT Y +    +     TW N S         RY G   +++ +
Sbjct: 638 ERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSALLS 688

Query: 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
            L P+  Y+F+VIA N++G   PS PS +Y T   +P   P+ + G G +  ++ I+W P
Sbjct: 689 -LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTP 747

Query: 909 LPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
           L   +   PN+ Y + WR+++    + +ET+K   +V   V   P    Y  YE+KVQA 
Sbjct: 748 LNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQAE 801

Query: 968 NDVGPGPESEV 978
           ND G  PE E 
Sbjct: 802 NDFGRAPEPET 812


>gi|237858641|ref|NP_001153792.1| neurofascin isoform 4 precursor [Gallus gallus]
          Length = 1170

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 232/851 (27%), Positives = 369/851 (43%), Gaps = 93/851 (10%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH+L++          IE P  +P+ P   KQ   D + D       ++I + C A G P
Sbjct: 19  LHHLISA---------IEVPLDLPQPPTITKQSVKDYIVDPR-----DNIFIECEAKGNP 64

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKAS 277
            P++ W +             +   D + ++    G L+I+     R  +  G Y C A 
Sbjct: 65  VPTFSWTRN--------GKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEYQCFAR 116

Query: 278 NKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           N +G+ +S  + L       +  ++   I  ++    ++ C+PP   P    +W      
Sbjct: 117 NDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSSM- 175

Query: 337 NFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVF---PHS 392
             + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + LKV    PH+
Sbjct: 176 EPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 235

Query: 393 -----NFQQLKFPNNFPKTFP-----------EAPKAGDKVRLECVAFGYPVPSYNWTRR 436
                N   +       +T P           +    G  + LEC+A G P P   W ++
Sbjct: 236 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKK 295

Query: 437 GSPLPR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
           G  LP      ENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +    
Sbjct: 296 GGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP 355

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN 555
            +  +    D    C A G P  +  W  NGE +        +  R    D   TI + +
Sbjct: 356 QNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRD 409

Query: 556 PE-RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
            +    A+YQC A N+     ++A + VL + P     P        +     + C    
Sbjct: 410 TQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFG 468

Query: 615 APKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
           +P P   W K+G  N++  GG  K  ENG+L +S   ++D GIY+C ATN+ G  E++ R
Sbjct: 469 SPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVR 527

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNEL 730
           L V   P+   + P    +      +L C    +  L +   W  +   + IGN    E 
Sbjct: 528 LEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE- 585

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 790
                  D GL  I   +  D G+Y CV  + + K S K  + V   P  P  +++ ++ 
Sbjct: 586 -------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLERPDRPRDLELSDLA 637

Query: 791 KTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIEN 848
           + S  + W  G  N  PIT Y +    +     TW N S         RY G   +++ +
Sbjct: 638 ERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSALLS 688

Query: 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
            L P+  Y+F+VIA N++G   PS PS +Y T   +P   P+ + G G +  ++ I+W P
Sbjct: 689 -LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTP 747

Query: 909 LPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
           L   +   PN+ Y + WR+++    + +ET+K   +V   V   P    Y  YE+KVQA 
Sbjct: 748 LNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQAE 801

Query: 968 NDVGPGPESEV 978
           ND G  PE E 
Sbjct: 802 NDFGRAPEPET 812


>gi|449280044|gb|EMC87436.1| Neurofascin [Columba livia]
          Length = 1372

 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 234/872 (26%), Positives = 373/872 (42%), Gaps = 95/872 (10%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILND 211
           L +   A +  LH+L++   T +  +D     ++P+ P   KQ   D + D       +D
Sbjct: 8   LTYAGIAFVLYLHHLVS---TIEVPLDANIQSELPQPPTITKQSVKDYIVDPR-----DD 59

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVED 268
           I + C A G P P++ W +      +      DP    R     G L+I+     R  + 
Sbjct: 60  IFIECEAKGNPVPTFSWTR----NGKFFNVAKDPKVSMR--RRSGTLVIDFHSGGRPEDY 113

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVN 327
            G Y C A N +G+ +S  + L       +  ++   I  ++    ++ C+PP   P   
Sbjct: 114 EGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPV 173

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPL 386
            +W        + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + L
Sbjct: 174 IFWMSSSM-EPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTL 232

Query: 387 KVF---PHS-----NFQQLKFPNNFPKTFP-----------EAPKAGDKVRLECVAFGYP 427
           KV    PH+     N   +       +T P           +    G  + LEC+A G P
Sbjct: 233 KVKTKKPHNETSLRNHTGMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVP 292

Query: 428 VPSYNWTRRGSPLPR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
            P   W ++G  LP      ENFN+ L I NV  ED GEY C ASN   ++  ++++ ++
Sbjct: 293 APDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVK 352

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
           A P +     +  +    D    C A G P     W  NGE + +      +  R    D
Sbjct: 353 AAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASP---PNPSREVAGD 409

Query: 547 NVLTIRYLNPE-RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN 605
              TI + + +    A+YQC A N+     ++A + VL + P     P        +   
Sbjct: 410 ---TIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQNNR 465

Query: 606 VTIFCNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
             + C    +P P   W K+G  N +  GG  K  ENG+L ++   ++D GIY+C ATN+
Sbjct: 466 TRLDCPFFGSPIPTLRWFKNGQGNTL-DGGNYKAHENGSLEMNMARKEDQGIYTCVATNI 524

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VR 721
            G  E++ RL V   P+   + P    +      +L C    +  L +   W  +   + 
Sbjct: 525 LGKAEAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDEAPLY 583

Query: 722 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV------- 774
           IGN    E        D GL  I   +  D G+Y CV  + + K   K  + V       
Sbjct: 584 IGNRMKKE--------DDGLT-IFGVAEKDQGDYTCVASTELDKDLAKAYLTVLAIPANR 634

Query: 775 --EGP---PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVS 827
             E P   P  P  +++ ++ + S  + W  G  N  PIT Y +    +      W N S
Sbjct: 635 SRELPKERPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGMWHNHS 694

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
                    RY G   +++ + L P+  Y+F+VIA N++G   PS PS +Y T   +P  
Sbjct: 695 ---------RYPGSVNSAVLS-LSPYVNYQFRVIAVNDVGSSLPSVPSERYQTNGARPEI 744

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGI 946
            P+ + G G +  ++ I+W PL   +   PN+ Y + WR+++    + +ET+K   +V  
Sbjct: 745 NPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDIRGSWYNETVKTARHV-- 802

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            V   P    Y  YE+KVQA ND G  PE + 
Sbjct: 803 -VWNTP---IYVPYEIKVQAENDFGRAPEPDT 830


>gi|427797293|gb|JAA64098.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
           pulchellus]
          Length = 1345

 Score =  239 bits (609), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 223/869 (25%), Positives = 378/869 (43%), Gaps = 121/869 (13%)

Query: 186 IPRGPYFIKQPT-DVVFDLSKRSILND--ITLSCYAGGYPNPSYEWFKE----DYVQDRL 238
           +P  P  +KQP  + ++ +S+     D    L C A G+P P+YEW K     DYV    
Sbjct: 1   VPSPPTMVKQPKHEQLYQVSQSQDELDKPFLLECEAQGHPEPTYEWTKNNKEFDYVS--- 57

Query: 239 VANLIDPLSDKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 296
                    DKR +     G L+   P  V D G Y C+A+N  G+ +S +V L    + 
Sbjct: 58  --------YDKRISQQPRRGTLVFTKPDDV-DEGLYQCRATNLHGTSVSNAVFLRKAELN 108

Query: 297 EFNLKRAPEI-GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGAL 353
            F  +   E+   +    ++ C+PPT YP  N +W   Y    +      R+    +G L
Sbjct: 109 NFAEETTKEVYVVEGDPLSLDCNPPTGYPRPNIFWLIQYSSGALRNVNSSRITADPEGDL 168

Query: 354 YFSALEQIDA---GNYSCNVQSKVSDTGRNGPFFPLKVFP--------HSNFQQLKFPNN 402
           +FS +E  DA     Y+C+  S      + G    LKV P        H+  +Q   P N
Sbjct: 169 HFSRVELGDALSDAVYTCSATSVFRREYKIGNKIQLKVEPTSSAGKAEHAPVKQYLSPPN 228

Query: 403 FPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS-PLPRNAYFENFNRILTIPNVKVE 461
                      G +++L C+  G P+P  +W++RG+ P  R   + N+ + L I +V  E
Sbjct: 229 L------VALRGHELKLYCIYGGTPLPQISWSKRGANPTSRRFTYSNYGKTLEIRSVSFE 282

Query: 462 DQGEYICRASNDRSALES-SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTY 520
           D+G Y C+A+N     ++ ++ + ++A P +     + +   +  +++ C A G+P+   
Sbjct: 283 DEGTYECQANNGVGVAQTHAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATGIPEPKL 342

Query: 521 SWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            WF NG       +P+E  +   R  ++  +LTI  L  +RD A+YQC A N     +  
Sbjct: 343 QWFVNG-------VPVEKAEPNPRRKVEGPLLTIEALT-KRDTAVYQCNASNPHGYAFRD 394

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
             L VL L P+  + P E  T A     VT+ C    AP+P+  W K+   + +GGR ++
Sbjct: 395 FYLNVLALPPTITEAP-EQLTLAVVTSRVTLRCRVFGAPRPEVKWMKEAQEL-TGGRYRV 452

Query: 638 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 697
            ++G+L I  +   D G Y+C A+N  G   + G L V  G +   Q P    +AA ++ 
Sbjct: 453 LDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSLEV-KGKTLITQPPENYEVAADKSA 511

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL-----EITNASFADA 752
             RC+A  +  L++   W  NG  + + + +     ++ + G  L     E    +   +
Sbjct: 512 TFRCNAEADPSLELKIEWLFNGQPV-DPEADARMXGSLEVKGKTLITQPPENYEVAADKS 570

Query: 753 GEYECVVKSTVGKISTKTTVIVEGPPGLP-GGVQVVEVHKTSATIQWTDGATNGRPITHY 811
             + C  ++    +  K   +  G P  P    ++V+    S TI  T    +G     Y
Sbjct: 571 ATFRCNAEAD-PSLELKIEWLFNGQPVDPEADARMVQAGDNSLTITRTIELDSG----IY 625

Query: 812 KIIARTNWNSTWFNVS---------EHVIGKEVD--------RYTGRKEASIEN------ 848
             +ART  +S     +           ++  + D        + TG + A I +      
Sbjct: 626 TCVARTELDSDRAQATLTVQDVPNPPQMVKIDCDGLMALVEWKPTGDRRAPILSYSIQYN 685

Query: 849 ------------VLVPWSTYEFKV------------IAGNELGYGEPSSPSPQYNTPADK 884
                       V +P    +FKV            +A N++G   PS  S +  TP D 
Sbjct: 686 TSFSPDTWEDAFVNIPAPDTKFKVSMSPWANYTFRVVARNKIGPSLPSGASSRCTTPEDV 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN--DTEFQSETLKEYG 942
           P++ P R+ G G +  +L I+W P+P  + NAP  +YK+ W++ +  D  + S  ++++ 
Sbjct: 746 PHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGFFYKVLWKRDDIPDATWNSRIIEDWK 805

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                    P+   +  Y +KV+A N  G
Sbjct: 806 QNRHVEYGQPT---FKPYRIKVEAHNRRG 831


>gi|126342128|ref|XP_001378160.1| PREDICTED: neural cell adhesion molecule L1 [Monodelphis domestica]
          Length = 1344

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 204/801 (25%), Positives = 339/801 (42%), Gaps = 50/801 (6%)

Query: 193 IKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP ++     ++ ++   +DI L C A G P   + W KE+     +  +    L   
Sbjct: 121 VMQPPNITEQSPEKLVVFPTDDIVLKCEASGKPEVQFRWTKEN-----IHFSPEKELGAT 175

Query: 250 RFTLSGGNLIINDPRQVEDR--GSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEI 306
               SG  +I  +      R  G+Y C ASN+ G+ +S  + L A G       K  P  
Sbjct: 176 THINSGSFIITGNTSNFAQRYQGTYRCFASNRLGTAMSHEIHLVAEGAPKWPKEKVQPFE 235

Query: 307 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GN 365
             +     + C+PP +      YW      + + +D+RV +  +G LYF+ +   D+  +
Sbjct: 236 VEEGQSVVLPCNPPASAVQPRIYWMNSRIFH-IAQDERVTMGQNGNLYFANVLTNDSHSD 294

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLEC 421
           Y C+     + T        L+V P +N      +L  P             G  + LEC
Sbjct: 295 YICHAHFLGARTIMQKEPIDLRVKPTNNMIYRRPRLLLPEGLTSRL--VALRGQPLVLEC 352

Query: 422 VAFGYPVPSYNWTRRGSPLPR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G+P P+  W+   + +      ++NFN+ L +  V+ ED GEY C A N   + +  
Sbjct: 353 IAEGFPTPTIKWSYPSNQMQAGRVTYQNFNKTLRLVRVEEEDDGEYRCWAENTLGSAQHV 412

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             ++++A P +        +         C+  G P    +W  NG  L +    L   D
Sbjct: 413 YYVTVEAAPYWLQEPESLVLAPGETARLNCQVQGRPRPMVTWRINGVSLEN----LTRDD 468

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           +  +Q   L +  + P  D  + QC A+N+     ++A + V+ L P+    P       
Sbjct: 469 KLRVQGGALILSNVQP-NDTMVTQCEARNKHGLLLANAYISVVQL-PTKILTPDNKTYRE 526

Query: 601 GEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
            +G    + CN    P P   W  +D   +    R   + NG L I  +  +D+G Y C 
Sbjct: 527 VQGSTAYLLCNAFGVPMPSIQWLNRDQATVLQDERFVPYANGTLAIRDLQTNDTGSYFCQ 586

Query: 660 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
           A N       K  L V    +  ++ P   T+    N+   C    +  L++   W  N 
Sbjct: 587 ADNDQNRVSIKAHLQVKEA-TQIKKGPEDRTVKKGSNVNFPCLVSFDPSLNIQIDWYWND 645

Query: 720 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
             I +      +     I    L I +  +AD G Y CV K+ +  +  K TV+V G PG
Sbjct: 646 QNIKDF----YKEDKYLIKEEELTIISLDYADQGNYSCVAKTALDSVEKKATVLVVGSPG 701

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDR 837
             G +++ +       + W+    +  PI  Y I    RT    TW+ ++  V G E   
Sbjct: 702 PVGQLELYKQKDFHVQLSWSPAEEHNSPIEKYNIEFEDRTMEPGTWYPLAT-VPGNE--- 757

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                  S    L P+  Y F+VIA N+ G  EPS  S  + TP   P + P+ + G G 
Sbjct: 758 ------TSTRLKLSPFVHYNFRVIANNKFGASEPSPDSEPFITPKSVPEKNPTNVKGEGN 811

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
           +  ++ I+W+PL     N P + Y++ WR+KN++E++   ++    V   V   P+   +
Sbjct: 812 ETNNMVITWKPLKWIDWNGPELKYRVQWRQKNESEWREVMVRASKYV---VSNTPT---F 865

Query: 958 TEYEVKVQAINDVGPGPESEV 978
             YE+KVQAIN+VG GP+  +
Sbjct: 866 VPYEIKVQAINEVGKGPDPHI 886


>gi|268532650|ref|XP_002631453.1| C. briggsae CBR-RIG-6 protein [Caenorhabditis briggsae]
          Length = 1198

 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 201/748 (26%), Positives = 321/748 (42%), Gaps = 57/748 (7%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           I L C   G P P+  W+K D      V  L   +S+  + LSGGNL++     +    S
Sbjct: 165 IALPCTVQGNPKPTVSWYKND------VEVLSPSMSNVSYLLSGGNLLVPASSSLA-YSS 217

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYW 330
           +HC A N  G + S  + L   FI  F   R         G  + CD P + P  + Y W
Sbjct: 218 FHCTAKNSLGEVRSPPILLKPSFIDAFRPHRLDVYSLATGGAKLDCDAPAHQPKSLTYSW 277

Query: 331 ARDYFPN-FVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL--- 386
                 +  + ++++ F+S DG L+FS +   D  +Y+C++    + +G  GPFF L   
Sbjct: 278 LYGSSTDRILSQNEKKFISLDGTLFFSYITSDDEDSYACSLSVYSTQSGHYGPFFRLISS 337

Query: 387 -KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR-RGSPLPRNA 444
                +S F   K  ++ P+ FPE PK GD + LEC A+  P+P Y W+R  G PLP  +
Sbjct: 338 TPKLANSTFPP-KLDSSQPQIFPEDPKVGDSIYLECFAYANPIPQYKWSRVDGKPLPSRS 396

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
           +  N+ R+L I  V   D G+Y C A+N   A    V + ++A P+    L D+ +  ++
Sbjct: 397 HISNYGRVLKIDRVNYGDSGKYKCVATNAFGAAAGEVHVKLRAPPSILQGLHDRLVPTES 456

Query: 505 DLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           ++++ C      D  +S  WF++ + +    LP E + R  I  N L ++ L  E D  +
Sbjct: 457 NVSFEC-LLSNADSYFSVEWFKDAKPIVPLLLPAEKRKRLHIDHNALHLK-LADESDSGV 514

Query: 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
           YQC   N + +  SSA L V    P F    +  + +A  G  V+I C  EA+P+    W
Sbjct: 515 YQCVVSNNVGSSSSSALLTVKDSAPVFPPNAMPRKVFAALGSTVSIPCIFEASPRFHGKW 574

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
              G        R   E+G + I  V  +D+G++ CTA N  G   ++ +LIV++ PS  
Sbjct: 575 ADAGGSRLPQKGRIRDEDGVISIEKVLHEDAGLFFCTAHNKLGKTHAQVQLIVMNKPSIK 634

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT----------------------HNGV 720
                + T+     ++L C  ++ E  +  + W                       H G 
Sbjct: 635 TNYLDEETVNMSCEVELTCE-NSAECPEALFEWKINDRPAKEYPSLKSKVHEKKSGHKGR 693

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
            +      +LE P        +     S    G  E V K    ++ +   + VE     
Sbjct: 694 HVKQK--VDLEVPKSLAGKRQIGRFACSSLYGGSSELVTKP---QLPSPIALTVEKMEEE 748

Query: 781 PGGVQVVEVH-KTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-EVDRY 838
            GG Q  +   K     Q  D   +   +  Y +  RT  N  W       IG  E D  
Sbjct: 749 GGGKQKKKFRLKWRLPPQHRDTRDHSPKVEGYLVELRTRKNRKWRAAERQFIGNMEKDSI 808

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
           T      +EN L+P + Y+F+V +      GEPS PS    T    P +    +      
Sbjct: 809 T------VEN-LLPNTEYQFRVRSVESAAIGEPSMPSDWVKTAPGAPSETIDNLKWRSLD 861

Query: 899 IGDLSISWEPLPR-EKQNAPNIYYKIFW 925
              L + W+P+ + ++ +  N+ Y++ W
Sbjct: 862 SQTLLVEWQPIEQGQESSGDNLRYRVSW 889



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 124/331 (37%), Gaps = 42/331 (12%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
           + I L C+A   P P Y+W + D            PL  +    + G ++  D     D 
Sbjct: 366 DSIYLECFAYANPIPQYKWSRVDG----------KPLPSRSHISNYGRVLKIDRVNYGDS 415

Query: 270 GSYHCKASNKFGSIISE---SVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
           G Y C A+N FG+   E    ++     +   + +  P   N ++ + +  +  + +   
Sbjct: 416 GKYKCVATNAFGAAAGEVHVKLRAPPSILQGLHDRLVPTESNVSF-ECLLSNADSYFSVE 474

Query: 327 NYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSC--------NVQSKVSDT 377
            +  A+   P  +  +KR  +  D  AL+    ++ D+G Y C        +  S +   
Sbjct: 475 WFKDAKPIVPLLLPAEKRKRLHIDHNALHLKLADESDSGVYQCVVSNNVGSSSSSALLTV 534

Query: 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR- 436
             + P FP    P   F  L                G  V + C+    P     W    
Sbjct: 535 KDSAPVFPPNAMPRKVFAAL----------------GSTVSIPCIFEASPRFHGKWADAG 578

Query: 437 GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
           GS LP+     + + +++I  V  ED G + C A N      + V + +  +P+      
Sbjct: 579 GSRLPQKGRIRDEDGVISIEKVLHEDAGLFFCTAHNKLGKTHAQVQLIVMNKPSIKTNYL 638

Query: 497 DKHMDNQA-DLTWTCE-AFGVPDVTYSWFRN 525
           D+   N + ++  TCE +   P+  + W  N
Sbjct: 639 DEETVNMSCEVELTCENSAECPEALFEWKIN 669



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 82/396 (20%), Positives = 146/396 (36%), Gaps = 44/396 (11%)

Query: 394 FQQLKFPNNFPKT--------FPEAPKAGDKVRLECVAFGYPVPSYNWTRRG----SPLP 441
           FQQ   P   PK         +    +  D + L C   G P P+ +W +      SP  
Sbjct: 134 FQQKLLPIGAPKISLTGQSEIYFHPRQDADYIALPCTVQGNPKPTVSWYKNDVEVLSPSM 193

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
            N  +      L +P         + C A N    + S     I  +P+F        +D
Sbjct: 194 SNVSYLLSGGNLLVPASSSLAYSSFHCTAKNSLGEVRSP---PILLKPSFIDAFRPHRLD 250

Query: 502 ------NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN 555
                   A L     A     +TYSW       +++ +  +++ ++   D  L   Y+ 
Sbjct: 251 VYSLATGGAKLDCDAPAHQPKSLTYSWLYGS---STDRILSQNEKKFISLDGTLFFSYIT 307

Query: 556 PERDPAMYQCR-AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE----------GG 604
            + D   Y C  +    ++ +     R+++  P         +  + +          G 
Sbjct: 308 SD-DEDSYACSLSVYSTQSGHYGPFFRLISSTPKLANSTFPPKLDSSQPQIFPEDPKVGD 366

Query: 605 NVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATN 662
           ++ + C   A P P++ W + DG  + S  R  I   G +L I  V+  DSG Y C ATN
Sbjct: 367 SIYLECFAYANPIPQYKWSRVDGKPLPS--RSHISNYGRVLKIDRVNYGDSGKYKCVATN 424

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYIWTHNGVR 721
             G    +  + +   PS  + L  ++ +    N+   C  ++ +    V   W  +   
Sbjct: 425 AFGAAAGEVHVKLRAPPSILQGLHDRL-VPTESNVSFECLLSNADSYFSVE--WFKDAKP 481

Query: 722 IGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
           I  + L   +   ++ID   L +  A  +D+G Y+C
Sbjct: 482 IVPLLLPAEKRKRLHIDHNALHLKLADESDSGVYQC 517



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 120/312 (38%), Gaps = 45/312 (14%)

Query: 499 HMDNQAD-LTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
           H    AD +   C   G P  T SW++N  E+L+    P      Y +    L +    P
Sbjct: 157 HPRQDADYIALPCTVQGNPKPTVSWYKNDVEVLS----PSMSNVSYLLSGGNLLV----P 208

Query: 557 ERDPAMY---QCRAKNQLKTRYSSAQLRVLTLKPSFKK--RPLESETYAGEGGNVTIFCN 611
                 Y    C AKN L    S   L    LKPSF    RP   + Y+   G   + C+
Sbjct: 209 ASSSLAYSSFHCTAKNSLGEVRSPPIL----LKPSFIDAFRPHRLDVYSLATGGAKLDCD 264

Query: 612 -PEAAPKP-KFVW---KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
            P   PK   + W        I+    ++ I  +G L  S ++ DD   Y+C+ +     
Sbjct: 265 APAHQPKSLTYSWLYGSSTDRILSQNEKKFISLDGTLFFSYITSDDEDSYACSLSVYSTQ 324

Query: 667 DESKG---RLIVLHGPSYYEQLPPKITIAAHR----------NLQLRCSAHTEELLDVAY 713
               G   RLI           PPK+  +  +          ++ L C A+   +    Y
Sbjct: 325 SGHYGPFFRLISSTPKLANSTFPPKLDSSQPQIFPEDPKVGDSIYLECFAYANPI--PQY 382

Query: 714 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            W+    R+    L      +I+  G +L+I   ++ D+G+Y+CV  +  G  + +  V 
Sbjct: 383 KWS----RVDGKPLPSRS--HISNYGRVLKIDRVNYGDSGKYKCVATNAFGAAAGEVHVK 436

Query: 774 VEGPPGLPGGVQ 785
           +  PP +  G+ 
Sbjct: 437 LRAPPSILQGLH 448


>gi|348513039|ref|XP_003444050.1| PREDICTED: neuronal cell adhesion molecule-like [Oreochromis
           niloticus]
          Length = 1268

 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 221/837 (26%), Positives = 367/837 (43%), Gaps = 85/837 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  +P+ P    Q P D + D  +     +I + C A G P+PS+ W +     D  
Sbjct: 22  LEVPLDLPQPPTITYQSPKDYIVDPRE-----NIIIHCEAKGKPHPSFSWTRNGTHFDVE 76

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQ-VED-RGSYHCKASNKFGSIISESVQLAF 292
            DR V    D           G L+++  R+ VE   G Y C A NK G+ +S ++ +  
Sbjct: 77  NDRNVDMKPD----------SGTLVVDISRERVEHYEGVYQCTARNKHGTAVSHNIVVRQ 126

Query: 293 GFIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
                ++ ++  P +  +     + C PP   P    +W  + F     + KRV  S +G
Sbjct: 127 SRSPLWSKEKIKPIVVQEGVSLVLPCRPPAGLPPPIIFWMDNNFQKL-PQSKRVSQSLNG 185

Query: 352 ALYFSALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVF--PHSNFQQLKFPNNFPKTFP 408
            LYFS + + D  N Y C  +   + T +      ++V      N     F N+    F 
Sbjct: 186 DLYFSNIRREDTRNDYICYARFPHTQTIQQKQPITVRVLNLDEINDTMAAFYNDT-DLFS 244

Query: 409 EAPK--------------------AGDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFE 447
           EAP                      GDK+ +EC+A G P P  +WT+    LP +   F 
Sbjct: 245 EAPVDDRRPTFLIPSGSSSSKMVLRGDKLEMECIAEGLPTPHISWTKISGDLPSKRTSFL 304

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFT-IPLTDKHMDNQADL 506
           N+N+ L I +V   D+G+Y C A N   ++  ++ ++++A P +  +P  +  +      
Sbjct: 305 NYNKTLHIEDVSASDEGDYRCTAKNQLGSVHHTIHVTVKAAPYWIDVPPKNLVLAPGESG 364

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
             +C A G P  T +W  NG  ++ E  P +D  R  ++D+ +    + P    A+YQC 
Sbjct: 365 RLSCLASGTPKPTITWAMNG--ISIENSP-KDLSRK-VEDDTIIFTDVQPGSS-AVYQCN 419

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKD 625
             N+     S+A + VL+  P     P  ++ Y     +  +  C+   +P PK  W KD
Sbjct: 420 ISNEYGYLLSNAFVNVLSEPPRVLTPP--NKVYQIIKNHQALLDCSSFGSPMPKITWFKD 477

Query: 626 G-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
             + I       + +NG L I       +G Y+C ATN  G+ E+   L V   P+   +
Sbjct: 478 TWSSILQEDPYILHDNGTLEIRIAQAQHNGKYTCVATNGLGIYENHVYLEVKE-PTRILK 536

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 744
            P    +   R++   C+   +  L     W  +    G +  +E     + +D   L I
Sbjct: 537 QPEYKEVQRGRSVVFECTVKHDPSLIPTMTWLKDD---GELPDDE----RLIVDSDSLTI 589

Query: 745 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 804
           T+ +  DAG Y C++ +T+   S    + V   P  P  +++ +  K S  + WT G  +
Sbjct: 590 TDVTEDDAGVYTCIMNTTLDHDSATAKLTVVERPDPPTDLELTDQKKRSVQLTWTPGDEH 649

Query: 805 GRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
             P+  + I    + +    W N++E V G +   +           L P   Y F+V+A
Sbjct: 650 NSPVQKFLIQYEDSLHHRGHWHNLTE-VPGTKTTAHLK---------LSPHVHYTFRVLA 699

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N +G+  PS PS  Y T    P + P+ + G G +  +L ISW+PL   + N P ++YK
Sbjct: 700 LNAVGFSNPSRPSRMYKTEPAAPDENPTGVQGFGTEHNNLVISWKPLTNLQSNGPGLHYK 759

Query: 923 IFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + WR KK ++E+   T+    N    V   P+   +  YE+KVQA+ND G GP+  +
Sbjct: 760 VMWRQKKVESEWNIVTVS--NNSKFVVSGTPT---FVPYEIKVQAVNDHGLGPDPAI 811


>gi|1480094|emb|CAA99303.1| neuron-glia cell adhesion molecule (Ng-CAM) [Gallus gallus]
          Length = 1280

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 204/782 (26%), Positives = 322/782 (41%), Gaps = 49/782 (6%)

Query: 210 NDITLSCYAGGYPNPSYEWFKED--YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267
           +DI L C A G P   Y W +ED  +V +      + P S        G L+IN      
Sbjct: 53  DDIVLKCVATGNPPVQYRWSREDQPFVPEEHGGVSVVPGS--------GTLVINATLAAR 104

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGV 326
            +G + C A+N  G+ +S    +      ++  K+   +  +     +  CDPP +    
Sbjct: 105 LQGRFRCFATNALGTAVSPEANVIAENTPQWPEKKVTPVEVEEGDPVVLPCDPPESAVPP 164

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             YW      + + +D+RV +  DG LYFS A+      +Y C+       T        
Sbjct: 165 KIYWLNSDIVH-IAQDERVSMGQDGNLYFSNAMVGDSHPDYICHAHFLGPRTIIQKEPLD 223

Query: 386 LKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
           L+V P     S   +L  P + P+T   A + G  V LEC+A G P P   W R   PLP
Sbjct: 224 LRVAPSNAVRSRRPRLLLPRD-PQTTTIALRGGSVV-LECIAEGLPTPWVRWRRLNGPLP 281

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
             A  ENFN+ L +  V   D GEY C A N R     + +++++A P +          
Sbjct: 282 TRAALENFNKTLRLWGVTESDDGEYECVAENGRGTARGTHSVTVEAAPYWVRRPQSGVFG 341

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
                   CE  G P     W  NG  +++    L   +R +++   L +  L P  D A
Sbjct: 342 PGETARLDCEVGGKPRPQIQWSINGVPIDA----LPGAERRWLRGGALVLPELRPN-DSA 396

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           + QC A+N+     ++A L V+ L P       E      E   V + C    AP P   
Sbjct: 397 VLQCEARNRHGRLLANAFLHVVEL-PVRMLTADEQRYEVVENQTVFLHCRTFGAPAPNVE 455

Query: 622 WKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           W            R  +F NG+L +S V   D G+Y+C A N H  + S   L+ +  P+
Sbjct: 456 WLTPTLEPALQDDRSFVFTNGSLRLSAVRGGDGGVYTCMAQNAHS-NGSLTALLEVRAPT 514

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDG 739
                P   T      +   C A  +  +    + W   G  + +        P  ++  
Sbjct: 515 RISAPPRSATAKKGETVTFHCGATFDPAVTPGELRWLRGGQPLPD-------DPRYSVAA 567

Query: 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
             L ++N  + D G  +C   + +     +  + V G PG    +QV+EV +    + WT
Sbjct: 568 ETLTVSNVDYGDEGTIQCRASTPLDSAEAEAQLRVVGRPGPIRDLQVMEVDEHRVRLSWT 627

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT--GRKEASIENVLVPWSTYE 857
            G  +  PI  + +       S          G+  +R T  G +  +    L P+  + 
Sbjct: 628 PGDDHNSPIEKFVVKEEEGIFSA---------GRFAERLTVPGGQPWTPPLPLSPYGRFR 678

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F+V+A N  G GE S+PS    TP   P + P  + G G + G+L I+WEPLP +  NAP
Sbjct: 679 FRVVAVNAYGRGEHSAPSAPIETPPAAPERNPGGVHGEGNETGNLVITWEPLPPQAWNAP 738

Query: 918 NIYYKIFWRKKNDTEFQSETLKEY---GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            + Y++ WR   +      +         V    V +     ++ ++++VQA+N  G GP
Sbjct: 739 WVRYRVQWRPLEEPGGGGPSGGFPWAESTVDAPPVVVGGLPPFSPFQIRVQAVNGAGKGP 798

Query: 975 ES 976
           E+
Sbjct: 799 EA 800


>gi|395545762|ref|XP_003774767.1| PREDICTED: neural cell adhesion molecule L1 [Sarcophilus harrisii]
          Length = 1248

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 210/819 (25%), Positives = 356/819 (43%), Gaps = 55/819 (6%)

Query: 174 YQYGMDIENPDKIPRGPYFIKQPTD--VVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE 231
           +  G+ I+ P ++ + P   +Q  +  VVF        ++I+L C A G P   + W KE
Sbjct: 14  WSLGLCIQIPKELMQPPNITEQSPERLVVFPT------DEISLKCEASGKPEVQFRWTKE 67

Query: 232 D-YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL 290
           + +        +I  ++   FT++G N       Q    G+Y C ASN+ G+ +S  +QL
Sbjct: 68  NIHFSPEKEPGVITHMNSGSFTITGNNSNFAHHYQ----GTYRCFASNRLGTAMSHEIQL 123

Query: 291 -AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
            A G       K  P    +     + C+PP +      YW      + + +D+RV +  
Sbjct: 124 VAEGAPKWPKEKVQPFEVEEGQSVVLPCNPPASVVQPRIYWMNSRIFH-IAQDERVTMGQ 182

Query: 350 DGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFP 404
           +G LYF+ +   D+  +Y C+     + T        L+V P +N      +L  P    
Sbjct: 183 NGNLYFANVLTNDSHSDYICHAHFLGARTIMQKEPIDLRVKPTNNMIYRRPRLLLPEGLT 242

Query: 405 KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQ 463
                    G  + LEC+A G+P P+  W+   + +      ++NFN+ L +  V+ ED 
Sbjct: 243 SRL--VALRGQPLVLECIAEGFPTPTIKWSYPSNQMQAGRVTYQNFNKTLRLVRVEEEDD 300

Query: 464 GEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWF 523
           GEY C A N     +    ++++A P +        +         C+  G P    +W 
Sbjct: 301 GEYRCWAENTLGMAQHVYYVTVEAAPYWLQEPESLVLAPGETARLNCQVQGRPRPMVTWR 360

Query: 524 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
            NG  ++ E L  +D+ R  +Q   L +  + P  D  + QC A+N+     ++A + V+
Sbjct: 361 ING--ISLENLTRDDKLR--VQGGALILSNVQP-NDTMVTQCEARNKHGLLLANAYIFVV 415

Query: 584 TLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENG 641
            L P+    P +S+TY   +G    + CN    P P+  W  +D   +    R   F NG
Sbjct: 416 QL-PTKILTP-DSKTYREVQGSTAYLLCNAFGVPMPRIQWLTRDRATVLQDERFVPFANG 473

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L I  +  +D+G Y C A N       +  L V    +  ++ P    +    N+   C
Sbjct: 474 SLAIRDLRINDTGSYFCEADNDQNTVAIQAHLQVKEA-TQIKKGPQNQIVKKGSNVNFMC 532

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
               +  L++   W  N   I ++           +    L I N  ++D G Y CVVK+
Sbjct: 533 QVSFDPSLEIQINWYWNDQNIKDI----FSDDKYILKEEELTIKNLDYSDQGNYSCVVKT 588

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNW 819
            +  +  K  ++V G PG  G V++ +       + W+    +  PI  Y I    RT  
Sbjct: 589 ALDSVEKKAALLVVGSPGPVGQVELYKQKDFQVQLSWSPAEEHNSPIEKYNIYFEDRTLD 648

Query: 820 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
              W  ++  V G E          S +  L P+  Y F+V+A N+ G  +PS  S  + 
Sbjct: 649 PGFWHQLAT-VPGNE---------TSTKLKLSPFIHYNFRVVASNKYGTSDPSPDSELFV 698

Query: 880 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK 939
           TP   P + PS + G G +  ++ I+W PL     N   + Y++ WR+KN++E+Q    +
Sbjct: 699 TPKSVPEKNPSDVKGEGNETNNMVITWMPLKWMDWNGMELKYRVQWRQKNESEWQEVMAR 758

Query: 940 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               V   V   P+   +  YE+KVQA+N+VG GP+ ++
Sbjct: 759 APSFV---VSNTPT---FVPYEIKVQAVNEVGKGPDPQI 791



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 169/812 (20%), Positives = 308/812 (37%), Gaps = 122/812 (15%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVEDRG 270
           + L C A G+P P+ +W    Y  +++ A         R T    N  +   R + ED G
Sbjct: 253 LVLECIAEGFPTPTIKW---SYPSNQMQAG--------RVTYQNFNKTLRLVRVEEEDDG 301

Query: 271 SYHCKASNKFG---SIISESVQLAFGFIGE-FNLKRAP----EIGNQNWGKAMFCDPPTN 322
            Y C A N  G    +   +V+ A  ++ E  +L  AP     +  Q  G+         
Sbjct: 302 EYRCWAENTLGMAQHVYYVTVEAAPYWLQEPESLVLAPGETARLNCQVQGRPR------- 354

Query: 323 YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382
            P V +        N   +DK       GAL  S ++  D     C  ++K      N  
Sbjct: 355 -PMVTWRINGISLENLTRDDK--LRVQGGALILSNVQPNDTMVTQCEARNKHGLLLANAY 411

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNW-TRRGSPLP 441
            F +++         K      KT+ E    G    L C AFG P+P   W TR  + + 
Sbjct: 412 IFVVQL-------PTKILTPDSKTYREV--QGSTAYLLCNAFGVPMPRIQWLTRDRATVL 462

Query: 442 RNAYFENF-NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
           ++  F  F N  L I ++++ D G Y C A ND++ +     + ++          ++ +
Sbjct: 463 QDERFVPFANGSLAIRDLRINDTGSYFCEADNDQNTVAIQAHLQVKEATQIKKGPQNQIV 522

Query: 501 DNQADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 558
              +++ + C+    P  ++  +W+ N + +      +   D+Y +++  LTI+ L+   
Sbjct: 523 KKGSNVNFMCQVSFDPSLEIQINWYWNDQNIKD----IFSDDKYILKEEELTIKNLD-YS 577

Query: 559 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA---A 615
           D   Y C     +KT   S + +   L         + E Y  +   V +  +P     +
Sbjct: 578 DQGNYSCV----VKTALDSVEKKAALLVVGSPGPVGQVELYKQKDFQVQLSWSPAEEHNS 633

Query: 616 PKPKF------------VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           P  K+             W +   + G+    K      L +SP    +   +   A+N 
Sbjct: 634 PIEKYNIYFEDRTLDPGFWHQLATVPGNETSTK------LKLSPFIHYN---FRVVASNK 684

Query: 664 HGM-DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV-- 720
           +G  D S    + +   S  E+ P  +    +    +  +    + +D    W  NG+  
Sbjct: 685 YGTSDPSPDSELFVTPKSVPEKNPSDVKGEGNETNNMVITWMPLKWMD----W--NGMEL 738

Query: 721 --RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             R+     NE E   +        ++N       E +    + VGK      VI     
Sbjct: 739 KYRVQWRQKNESEWQEVMARAPSFVVSNTPTFVPYEIKVQAVNEVGKGPDPQIVIGYSGE 798

Query: 779 GLPGGVQVVEVHKTSAT---IQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSE 828
            +P  + ++++   +AT   I+W         G   G  +T++ +      NS W     
Sbjct: 799 DVPQAIPIIDIESLNATSVKIKWGPVDLNKVRGHLRGYKVTYWWV------NSRWSRSKR 852

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA---DKP 885
           H     ++R     EA + + L P+S Y  +V   N  G G PS  + Q++T     D+P
Sbjct: 853 HSSKMSIERPASATEAVLSD-LRPYSIYNVQVQVFNGRGLGPPSE-TRQFHTEEGVPDRP 910

Query: 886 YQAPSRIGGGGGKIGD--LSISWEPL--PREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 941
                R      ++ D  L +SW+P   P  +     ++Y+   ++  + E +++TL   
Sbjct: 911 QSLHLR------RLSDTALQLSWKPPLNPNGELKGYQLFYEAINQETEEKEKKNQTL--- 961

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            +  I ++ +        Y  +++A   VGPG
Sbjct: 962 -HPTILMLNLSGLSPQALYHFQLRATTSVGPG 992


>gi|327271271|ref|XP_003220411.1| PREDICTED: neurofascin-like [Anolis carolinensis]
          Length = 1164

 Score =  236 bits (601), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 225/833 (27%), Positives = 351/833 (42%), Gaps = 95/833 (11%)

Query: 194 KQPTDVVFDLSKRSILN-------DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           +QP      ++K+S+ N       +I + C A G P P++ W +             +  
Sbjct: 12  RQPVHQPPTITKQSVKNYIVDPRDNIFIECEAKGNPVPTFSWTRN--------GKFFNVA 63

Query: 247 SDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            D R ++    G L ++     R  +  G Y C A N FG+ IS  + L          K
Sbjct: 64  KDPRVSMRHWSGTLAVDFRSGGRPEDYEGEYQCFARNDFGTAISNKIFLQVS-KSPLWPK 122

Query: 302 RAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALE 359
              +I   + G  +   C+PP   P    +W        + +DKRV   ++G LYFS + 
Sbjct: 123 ENLDIQEVHEGAQLILACNPPPGLPPPAIFWMSSSM-EPIHQDKRVSQGHNGDLYFSNVL 181

Query: 360 QIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN---------------- 402
           Q D+  +YSCN +   + T +    + LKV       +  F N+                
Sbjct: 182 QEDSQTDYSCNARFAFTHTIQQKNPYTLKVLTKHPLNETSFRNHTDIYSARGITERHPSF 241

Query: 403 -FPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNV 458
            +P   P +     G+ + LEC+A G P P   W ++G  LP      ENF++ L I NV
Sbjct: 242 MYPVGSPSSQMVLRGEDLLLECIASGVPTPGIMWHKKGGDLPAGRTKLENFDKALHIANV 301

Query: 459 KVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDV 518
             ED GEY C ASN        +++ ++A P +     +  +    D    C+A G P  
Sbjct: 302 SEEDSGEYFCLASNKVGTSRHVISVIVKAAPFWLDEPQNLILAPGEDGRLVCQANGNPKP 361

Query: 519 TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 578
           +  W  NGE + S      +  R    D ++  R +      A+YQC A N+     ++A
Sbjct: 362 SIQWLVNGEPIESSA---PNPSREVTGDTIM-FRDIQ-SGSSAVYQCNASNEHGYLLANA 416

Query: 579 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRR 635
            + VL + P     P              + C    +P P   W K+G   GS   GG  
Sbjct: 417 FVSVLDVIPRILA-PRNQLIKVILNNRTLLNCPFFGSPIPTLRWFKNGQ--GSTLHGGNY 473

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           K  ENG L I    ++D G Y+C ATN+ G  +++ RL +   P+     P         
Sbjct: 474 KAHENGTLEIIRARKEDQGTYTCVATNLLGKAQNQVRLEI-KDPTRIIDGPKDAVPKKGS 532

Query: 696 NLQLRCSAHTEELLDVAYIWTHN------GVRIGNMDLNELETPNINIDGGLLEITNASF 749
            + L C    +  L +   W  +      G RI   D           DG  L I   S 
Sbjct: 533 TVYLVCRTIHDPTLRLTVSWLKDDVPLYLGTRIKKED-----------DG--LTIYGVSE 579

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 809
            D G Y CV  + + K + +  + +   P  P  +++ ++ + S  + W  G  N  PIT
Sbjct: 580 KDQGYYTCVASTELDKDTARAHLTILARPDRPRDLELTDLSERSVRLTWIPGDDNNSPIT 639

Query: 810 HYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
            Y +    +      W N S         RY G   +++   L P+  Y+F+VIA NE+G
Sbjct: 640 DYIVEFEEDRYEPGRWQNHS---------RYPGSVNSAVLR-LAPYVNYQFRVIAVNEVG 689

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
              PS PS +Y+T   +P   P+ + G G    ++ ISW PL   +   PN+ Y + WR+
Sbjct: 690 SSYPSLPSERYHTNGARPEYNPTGVQGAGTAKNNMVISWTPLSATQVYGPNLRYIVKWRR 749

Query: 928 KNDTE-FQSETLKEYGNVG-IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           ++  E + + T+K  G+V    V + P    YT YE+KVQA+ND G  PE++ 
Sbjct: 750 RDTRESWSNRTVK--GDVSQYTVTQTP---IYTPYEIKVQAVNDYGMAPEADT 797


>gi|312380248|gb|EFR26301.1| hypothetical protein AND_07751 [Anopheles darlingi]
          Length = 1117

 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 200/732 (27%), Positives = 314/732 (42%), Gaps = 45/732 (6%)

Query: 256 GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEI---GNQNWG 312
           G L+I  PR  ED G Y C A N+ G   S SV +    +  F  K  P +    ++   
Sbjct: 31  GTLVITSPRD-EDLGQYQCFAENEHGIATSNSVFVRKAELNSF--KDGPPLTVPADEGKP 87

Query: 313 KAMFCDPPTNYPGVNYYWARDYFPNFVEE--DKRVFVSYDGALYFSALEQIDAGN---YS 367
             + C PP  +P  N YW        +    + R+ +  +G L+FS + + D  N   Y+
Sbjct: 88  FKLVCQPPDGWPKPNVYWMIQNMDGGIRSINNSRMTLDPEGNLWFSNVTRDDESNDFFYA 147

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHS-NFQQLKFP--NNFPKTFPEAPKAGDKVRLECVAF 424
           C   S      + G    L+V     +  Q + P    +     E    G +V L C+  
Sbjct: 148 CAASSMFRSEYKIGNRVLLQVKQTGISAAQNRHPPTRQYVSRKNEVALKGKQVELFCIYG 207

Query: 425 GYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASNDRSALES-SV 481
           G P+P   WT+ G  +  N   +  N+ + L I  V  ED G Y C  SN     +S S+
Sbjct: 208 GTPLPETVWTKNGRAIIWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGVGNADSYSI 267

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
            +++ A P FT+     +        + CEA G P     W  NG+ ++          R
Sbjct: 268 NLAVNAVPYFTVEPEIVNAAEGETAEFRCEAAGDPSPNIIWIHNGKPIDQS----PRNPR 323

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +  N +    L  + D   Y C A N L   Y    L VL L P     P     +  
Sbjct: 324 RVVSTNRIYFNKLE-KGDTGNYGCNATNSLGYVYKDVFLNVLALAPEITDPP--KREFTV 380

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 661
           +  NVT+ C    APKP+  W ++   + +GGR +   +G+L I  V  DD+G Y+C A+
Sbjct: 381 DQRNVTMTCRVFGAPKPQVKWVRNQREL-TGGRYQTLSSGDLFIRDVKFDDAGEYTCHAS 439

Query: 662 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 721
           N  G  ++ G LIV    +     P    + A      RC+A  +  L++   W  NG  
Sbjct: 440 NKLGERQASGELIVKEH-TVINDPPQDYEVEAGTTATFRCNAVADSSLELTIEWLTNGEV 498

Query: 722 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
           I   D +  +   I      L I+     D G Y C+ K+ + ++    T+ V   P  P
Sbjct: 499 I---DFDS-QPRFIRTSDNSLMISKTIELDTGIYSCLAKTELDEVMANATLTVMDRPNPP 554

Query: 782 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 840
              +V+   K  A I+WT    N  PI +Y I   T++   TW  ++E V G ++     
Sbjct: 555 TLERVICYGKV-AKIEWTSNGDNRSPILNYIIEYNTSFTPDTWTLLTEDVPGTDLSWVVN 613

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
                      PW+ Y ++VIA N++G   PS  S   +T    PY+ P  +   G +  
Sbjct: 614 ---------TTPWNNYTYRVIAVNKVGRSLPSGHSEVCSTETSVPYKCPDGVEAEGTEPN 664

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTE 959
           +L I W P+ +   NAP  +Y+++WR+   +  + S  ++++      V  +P+   +TE
Sbjct: 665 NLVIKWNPMAQVDHNAPGFHYRVYWRRNIPSGTWSSVDVRDWRQSSYTVEGLPT---FTE 721

Query: 960 YEVKVQAINDVG 971
           Y +KV A+ND G
Sbjct: 722 YHIKVIAVNDRG 733



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 160/379 (42%), Gaps = 37/379 (9%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV--EDR 269
           + L C  GG P P   W K       ++ N  D +    +   G +L I   R+V  ED 
Sbjct: 200 VELFCIYGGTPLPETVWTKNGRA---IIWN--DKIQQDNY---GKSLKI---RRVSSEDA 248

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGK-AMFCDPPTNYPGVNY 328
           G+Y C+ SN  G+  S S+ LA   +  F ++  PEI N   G+ A F       P  N 
Sbjct: 249 GTYTCEVSNGVGNADSYSINLAVNAVPYFTVE--PEIVNAAEGETAEFRCEAAGDPSPNI 306

Query: 329 YWARDYFP-NFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
            W  +  P +    + R  VS +  +YF+ LE+ D GNY CN  + +    ++     L 
Sbjct: 307 IWIHNGKPIDQSPRNPRRVVSTN-RIYFNKLEKGDTGNYGCNATNSLGYVYKDVFLNVLA 365

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
           + P     ++  P   PK   E       V + C  FG P P   W R    L    Y  
Sbjct: 366 LAP-----EITDP---PKR--EFTVDQRNVTMTCRVFGAPKPQVKWVRNQRELTGGRYQT 415

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
             +  L I +VK +D GEY C ASN     ++S  + ++       P  D  ++     T
Sbjct: 416 LSSGDLFIRDVKFDDAGEYTCHASNKLGERQASGELIVKEHTVINDPPQDYEVEAGTTAT 475

Query: 508 WTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYF-IQDNVLTIRYLNPERDPAMYQ 564
           + C A      ++T  W  NGE+++      + Q R+    DN L I     E D  +Y 
Sbjct: 476 FRCNAVADSSLELTIEWLTNGEVID-----FDSQPRFIRTSDNSLMISK-TIELDTGIYS 529

Query: 565 CRAKNQLKTRYSSAQLRVL 583
           C AK +L    ++A L V+
Sbjct: 530 CLAKTELDEVMANATLTVM 548



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 155/633 (24%), Positives = 239/633 (37%), Gaps = 101/633 (15%)

Query: 348 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407
           +Y  +L    +   DAG Y+C V + V +         +   P+   +            
Sbjct: 233 NYGKSLKIRRVSSEDAGTYTCEVSNGVGNADSYSINLAVNAVPYFTVE------------ 280

Query: 408 PEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAY-FENFNRILTIPNVKVE 461
           PE   A  G+     C A G P P+  W   G P+   PRN     + NRI     ++  
Sbjct: 281 PEIVNAAEGETAEFRCEAAGDPSPNIIWIHNGKPIDQSPRNPRRVVSTNRIY-FNKLEKG 339

Query: 462 DQGEYICRASNDRSALESSVTISIQA-EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTY 520
           D G Y C A+N    +   V +++ A  P  T P   +   +Q ++T TC  FG P    
Sbjct: 340 DTGNYGCNATNSLGYVYKDVFLNVLALAPEITDPPKREFTVDQRNVTMTCRVFGAPKPQV 399

Query: 521 SWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQL 580
            W RN   L             FI+D    +++     D   Y C A N+L  R +S +L
Sbjct: 400 KWVRNQRELTGGRYQTLSSGDLFIRD----VKF----DDAGEYTCHASNKLGERQASGEL 451

Query: 581 RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSGGRRKIF 638
            ++         P + E  AG     T  CN  A    +    W  +G +I    + +  
Sbjct: 452 -IVKEHTVINDPPQDYEVEAGT--TATFRCNAVADSSLELTIEWLTNGEVIDFDSQPRFI 508

Query: 639 E--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696
              + +L+IS     D+GIYSC A        +   L V+  P+     PP +       
Sbjct: 509 RTSDNSLMISKTIELDTGIYSCLAKTELDEVMANATLTVMDRPN-----PPTLE------ 557

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVR---IGN--MDLNELETPNI------NIDGGLLE-I 744
            ++ C     ++      WT NG     I N  ++ N   TP+       ++ G  L  +
Sbjct: 558 -RVICYGKVAKIE-----WTSNGDNRSPILNYIIEYNTSFTPDTWTLLTEDVPGTDLSWV 611

Query: 745 TNASFADAGEYECVVKSTVGK---------ISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 795
            N +  +   Y  +  + VG+          ST+T+V    P   P GV+       +  
Sbjct: 612 VNTTPWNNYTYRVIAVNKVGRSLPSGHSEVCSTETSV----PYKCPDGVEAEGTEPNNLV 667

Query: 796 IQWTDGAT--NGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
           I+W   A   +  P  HY++  R N  S TW           VD    R+ +     L  
Sbjct: 668 IKWNPMAQVDHNAPGFHYRVYWRRNIPSGTW---------SSVDVRDWRQSSYTVEGLPT 718

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPS-----RIGGGGGKIGDLSISW 906
           ++ Y  KVIA N+ G    S P  +Y  +  DKP  AP+     ++ G    I    +SW
Sbjct: 719 FTEYHIKVIAVNDRGEAN-SGPWEKYVYSGEDKPLDAPTNFTLIQVTGPSTAI----VSW 773

Query: 907 EPLPREKQNAPNIYYKI-FWRKKNDTEFQSETL 938
            P+  E        YKI  W + +  E   E L
Sbjct: 774 NPVTPESLRGHFKGYKIQTWTEADGEENLREVL 806



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 15/89 (16%)

Query: 193 IKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT 252
           I  P    F + +R    ++T++C   G P P  +W          V N  +    +  T
Sbjct: 370 ITDPPKREFTVDQR----NVTMTCRVFGAPKPQVKW----------VRNQRELTGGRYQT 415

Query: 253 LSGGNLIINDPRQVEDRGSYHCKASNKFG 281
           LS G+L I D +  +D G Y C ASNK G
Sbjct: 416 LSSGDLFIRDVK-FDDAGEYTCHASNKLG 443


>gi|196016265|ref|XP_002117986.1| hypothetical protein TRIADDRAFT_62007 [Trichoplax adhaerens]
 gi|190579459|gb|EDV19554.1| hypothetical protein TRIADDRAFT_62007 [Trichoplax adhaerens]
          Length = 1083

 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 219/822 (26%), Positives = 351/822 (42%), Gaps = 83/822 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSI-LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS- 247
           P    QP D + + +  S     + + C   G  N +Y W               +P+  
Sbjct: 31  PTITIQPIDFMNEHAIYSTGSGKVVIPCQTTGSGNITYAWRHNG-----------NPIQL 79

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE-I 306
           D R  +  GNL + +    +D G Y C ASN +G+ IS  V L    +   +L+   E I
Sbjct: 80  DDRIKILDGNLSVANITASDD-GKYICLASNLYGTSISREVTLQVSVV--HSLRNISENI 136

Query: 307 GNQNWGKA----MFCDPPTNYPG-VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI 361
              ++G A       +  T  P     YW         E        YDG L F A  Q 
Sbjct: 137 IQSSYGSARLRCQISNQTTRMPKPSQIYWTASDDSRVPETTSIAINEYDGDLIFIAGWQN 196

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD------ 415
           + G+Y CNV  K+ D    G    +K+   +     K P +   +F  APK  +      
Sbjct: 197 NTGSYKCNVIFKLFDP-TTGSSTKIKLTGAAQHVYFKIPTSATPSF--APKIEEGPTDII 253

Query: 416 ------KVRLECVAFGYPVPSYNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQGEYIC 468
                 +V LEC++ GYP+P+  W ++  PLP N Y  E F R L +  ++  D GEY C
Sbjct: 254 AILGQVRVILECISTGYPIPTILWQKKLGPLPNNRYSIEKFGRHLVLKYIQEADAGEYQC 313

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            A +    + +S  + +  +  +   +T+ +    +D  W C   G  D+ Y W+RNG+ 
Sbjct: 314 IAFSGFKQVSASAKLRVAIDSRWKASITNTNQPIGSDFIWPCSVSGF-DIKYKWYRNGQR 372

Query: 529 LNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
           ++          +Y +  N  LTIR+L+P  D A+Y C+  N      SS  L V+   P
Sbjct: 373 ISGS-------PQYNLHANGSLTIRHLSPS-DAAVYSCQGYNNHSNIVSSGYLNVIVAAP 424

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLI 645
           +F K P    T+   G N T+ C     P+P   + K+G  I      K     NGNL+I
Sbjct: 425 TFIKSPYTQATFF-RGQNATLRCTVTGGPRPTVEYTKNGRTIDRQLHNKYTAQLNGNLII 483

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             V   D+G+Y C A+N +G  E  G  ++    ++ + L  K  +   +   L C    
Sbjct: 484 HHVQDSDAGVYKCIASNRYGTAEVSGSAVIKIATTFTKSL-TKTFVRRPQGFILSCQIQK 542

Query: 706 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV-- 763
           +  L+V + W   G  I      +    N++     L  +++S  D+G + C V + V  
Sbjct: 543 DPSLNVVFYWQKEGKNI----TTQKAVLNVHGLTTTLTYSSSSLGDSGRFSCFVATHVPF 598

Query: 764 ---GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
                 S+   + V   P  P   +  +V+ +SA + W  G +N  P+  Y +  R N N
Sbjct: 599 AGYETQSSSAMLTVHDIPDSPSDFRYNQVNASSAVLSWLPGNSNNSPLLRYGLTYRVNSN 658

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
               N    V   +V  +     A+   V L P++ Y FK+IA N +G  +  +PS  ++
Sbjct: 659 R-LSNDPWRVAINDVPPW-----ATFHRVNLSPYNYYHFKLIAINGVGSSKI-TPSLTFH 711

Query: 880 TPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 937
           T  D PY +P   R   G      + I ++PL R++ N P+IY        N  EF+ + 
Sbjct: 712 TDVDIPYHSPGEFRASSGTADGAIIEIRYKPLSRDEMNGPHIY--------NLLEFKPQA 763

Query: 938 LK---EYGNVG-IAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           +     + N+G     R+      T Y+++++  ND+G G E
Sbjct: 764 ISSSWSFINIGNNGSYRLTGVLENTVYKLRLRPFNDIGLGKE 805



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 24/212 (11%)

Query: 564 QCRAKNQLKTR------YSSAQLRVLTLKPSFKKRPL----ESETYAGEGGNVTIFCNPE 613
           + R +NQ+  R       +++ L +    P+   +P+    E   Y+   G V I C   
Sbjct: 2   RIRRENQMMKRSLLAFVLATSTLALALHSPTITIQPIDFMNEHAIYSTGSGKVVIPCQTT 61

Query: 614 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 673
            +    + W+ +GN I    R KI + GNL ++ ++  D G Y C A+N++G   S+   
Sbjct: 62  GSGNITYAWRHNGNPIQLDDRIKILD-GNLSVANITASDDGKYICLASNLYGTSISREVT 120

Query: 674 IVLHGPSYYEQLPPKITIAAHRNLQLRC--SAHTEELLDVAYI-WTHNGVRIGNMDLNEL 730
           + +        +   I  +++ + +LRC  S  T  +   + I WT       + D    
Sbjct: 121 LQVSVVHSLRNISENIIQSSYGSARLRCQISNQTTRMPKPSQIYWT------ASDDSRVP 174

Query: 731 ETPNINI---DGGLLEITNASFADAGEYECVV 759
           ET +I I   DG L+ I      + G Y+C V
Sbjct: 175 ETTSIAINEYDGDLIFIAGWQ-NNTGSYKCNV 205


>gi|348521534|ref|XP_003448281.1| PREDICTED: neural cell adhesion molecule L1-like [Oreochromis
           niloticus]
          Length = 1283

 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 218/821 (26%), Positives = 354/821 (43%), Gaps = 84/821 (10%)

Query: 186 IPRGPYFIKQPTDV-VFDLSKRSILNDITLSCYAGGYPNPSYEWFK--EDYVQDRLVANL 242
           + R P    QP  V VF         D  ++C A G P+P + W K  ED+         
Sbjct: 49  LKRPPVIKTQPESVTVFSTE------DFVMNCEASGNPSPIFRWAKDGEDF--------- 93

Query: 243 IDPLSDKRFTLS--GGNLIINDPRQVED-----RGSYHCKASNKFGSIISESVQLAFGFI 295
            DP SD    +S   G+          D     +G Y C ASN+ G+ +S    L     
Sbjct: 94  -DPGSDPELKVSESSGSFAFYTLSNTMDTLNKYKGKYVCYASNELGTAVSNEAILNTDVP 152

Query: 296 -GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
             +   K+  E  ++     + C+PP +      +W  D     +E  KRV V  DG LY
Sbjct: 153 PSQQKDKKVDETADEGKSFILKCNPPQSSMEPIIHWM-DLRLRHIELSKRVMVGKDGNLY 211

Query: 355 FSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF-----QQLKFPNNFPKTFP 408
           F+ LE  D+  +Y+CNVQ   + T        LKV P ++       Q+  P     T+ 
Sbjct: 212 FANLESSDSRDDYTCNVQYLATRTILAKEPTSLKVNPSNSVLRNRRPQMMRPTGHHSTYH 271

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN-FNRILTIPNVKVEDQGEYI 467
                G  + LEC+  G P P  +W RR   L      ++ F+R L   N+   D GEY 
Sbjct: 272 AL--RGQTLELECIVEGLPTPEVSWMRRDGELSETRTTKDMFDRRLRFTNISESDGGEYQ 329

Query: 468 CRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
           C A N +   +    ++++A P +      +       +   C+A G+P    SW  NG 
Sbjct: 330 CIAENSQGNTKHIYMLTVEAAPYWIKEPVSQLYAPGETVRLDCQADGIPSPIISWTINGV 389

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
            ++      +D  R       L +  +N   D A+YQCRA N+  T  ++  + V+ L P
Sbjct: 390 PISGVD---KDPRRTLTASGSLILEDVN-FGDTAIYQCRASNKHGTILTNTNVYVIELPP 445

Query: 588 SFKKRPLESETYA-GEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLL 644
                  +  TYA  EG    + C    +PKPK +W++  D + + +  R     NG L 
Sbjct: 446 QILTD--DGNTYAYTEGQKALLECETFGSPKPKVIWERNNDSSFLLADRRVNPLSNGWLE 503

Query: 645 ISPVSRDDSGIYSCTATN----VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           I+ V+  D GIY+CT  N    +    E   R ++L  P         + + A       
Sbjct: 504 IANVTHSDDGIYTCTVPNSNLSISAELEIFNRTVILSPPQ-------ALKVQAGERAIFT 556

Query: 701 CSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 759
           C +  +  LD  +I W  N  ++ + + ++  T    +DG  L+I +    D G Y C +
Sbjct: 557 CLSLADPRLDPPFIQWRKNNQKLADSNNDKKYT----MDGPDLKIADVQPDDEGVYTCEI 612

Query: 760 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI---IAR 816
            + +     + T+ +   P  P  +Q+ +    + T+ WT G  +  P+T Y +     R
Sbjct: 613 ITKLDVAEARGTLTLWDRPDPPILLQISDPKDRTVTLSWTPGDDHNGPVTEYVVEFEDQR 672

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
           +N  S W         K + R    KE ++ + L P+ +Y F+VIA N++G  +PS PS 
Sbjct: 673 SN-ESVW---------KMLARVRENKERAVLS-LWPFMSYRFRVIAINDVGKSDPSKPSG 721

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK--NDTEFQ 934
            +NTPA+ P   P  +     +   L I+W+ + + + + P   Y + WR+      ++ 
Sbjct: 722 IHNTPAEAPDNNPEDVKSESIEPNTLVITWKKMDKTEVHGPGFKYCVQWRQAVGGGPDWH 781

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
            +      NV     R+ +   ++ YE+KVQA+N++G GPE
Sbjct: 782 EK------NVTEPPFRVDNVGNFSAYEIKVQALNEIGRGPE 816



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           +S YE KV A NE+G G    P   Y+   D P +AP  +G        + ++W P+ +E
Sbjct: 798 FSAYEIKVQALNEIGRGPEPDPVIGYSG-EDVPLEAPMDVGVEIINSTTIKVTWAPIDKE 856

Query: 913 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--------YTEYEVKV 964
                 + YKI + +K           +     + V   P+E          ++ Y +KV
Sbjct: 857 TVRGHLLGYKIHYTRKVHRSHHRGRRAQELESTVVVKTEPNEKKKVISDLRPFSNYTLKV 916

Query: 965 QAINDVGPGPESEV 978
              N  G GP SE 
Sbjct: 917 TVYNIKGEGPFSEA 930


>gi|308493411|ref|XP_003108895.1| CRE-RIG-6 protein [Caenorhabditis remanei]
 gi|308247452|gb|EFO91404.1| CRE-RIG-6 protein [Caenorhabditis remanei]
          Length = 1216

 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 192/751 (25%), Positives = 325/751 (43%), Gaps = 65/751 (8%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           I L C   G P P+  W+K D      V  L   +S+  + LSGGNL++     +    S
Sbjct: 185 IALPCTVQGNPKPTVSWYKND------VEVLSPSMSNVSYLLSGGNLLVPASSSLA-YSS 237

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYW 330
           +HC A N  G + S  + L   FI  F   R         G  + CD P + P  + + W
Sbjct: 238 FHCTAKNSLGEVRSPPILLKPSFIDPFRPHRLDVYSLATGGAKLDCDAPAHQPKSLTFSW 297

Query: 331 ARDYFPN-FVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL--- 386
                 +  + +++R F+S DG L+FS +   D  +Y+C++    + +G  GPFF L   
Sbjct: 298 LHGASTDRILSQNERKFISLDGTLFFSFVTSEDEDSYACSLSVYSTQSGHYGPFFRLISS 357

Query: 387 -KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR-RGSPLPRNA 444
                +S FQ  K  ++ P+ FPE PK GD + LEC A+  P+P Y W+R  G PLP  +
Sbjct: 358 TPKLVNSTFQP-KLDSSQPQIFPEDPKIGDSIYLECFAYANPIPQYKWSRVDGKPLPPRS 416

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
           +  N+ R+L I  V   D G+Y C A+N   A    V + ++A P+    L D+ +  ++
Sbjct: 417 HISNYGRVLKIEKVNYGDAGKYKCVATNAFGAAAGEVHVKLRAPPSILQDLHDRLIPTES 476

Query: 505 DLTWTCEAFGVPDV-TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
           ++++ C         +  WF++ + +    LP E + R  I  N+L ++  + E D  +Y
Sbjct: 477 NVSFECLLSNADSYSSVEWFKDAKPIVPLLLPAEKRKRLRIDHNILHLKMAD-ESDSGVY 535

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 623
           QC   N + +  SS+ L V    P F    +  + +A  G  V+I C  EA+P+    W 
Sbjct: 536 QCVVSNDVGSSSSSSLLTVKDSAPIFPPNAMPRKVFAALGSTVSIPCIFEASPRFHGKWA 595

Query: 624 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
             G        R   E+G + I  V  +D+G++ CTA N  G   ++ +LIV++ PS   
Sbjct: 596 DAGGSRLPQKGRIRDEDGIMSIEKVLHEDAGLFFCTAHNKLGKSHAQVQLIVMNKPSIKT 655

Query: 684 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG---------------VRIGNMDLN 728
               + T+     ++L C  ++ E  +  + W  N                 + G+   +
Sbjct: 656 NYLDEETVNMSCEVELTCE-NSAECPEALFEWKINDRPSKEYPSLKSKVHEKKSGHKGRH 714

Query: 729 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV-V 787
             +  ++ +   L     A     G + C   S  G  S   T      P LP  + + V
Sbjct: 715 VKQKVDLEVPKSL-----AGRRQIGRFAC--SSLYGGSSELIT-----KPQLPSPIALTV 762

Query: 788 EV------HKTSATIQW------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           E        K    ++W       D   +   +  Y +  RT  N  W      ++G   
Sbjct: 763 EQMDEDGNQKKKFRLKWRLPPQHRDTRDHSPKVEGYLVELRTRRNRKWRAAERQLVGN-- 820

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
                +   ++EN L+P + Y+F+V +      G+PS PS    T    P +    +   
Sbjct: 821 ---MEKDSITVEN-LLPNTEYQFRVRSVESAAIGDPSMPSDWVKTAPGAPSETIDNLKWR 876

Query: 896 GGKIGDLSISWEPLPR-EKQNAPNIYYKIFW 925
                 + + W+P+ + ++ +  N+ Y++ W
Sbjct: 877 SLDSQTILVEWQPIEQGQESSGDNLRYRVSW 907



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/366 (21%), Positives = 131/366 (35%), Gaps = 60/366 (16%)

Query: 173 TYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED 232
           T+Q  +D   P   P  P                 I + I L C+A   P P Y+W + D
Sbjct: 365 TFQPKLDSSQPQIFPEDP----------------KIGDSIYLECFAYANPIPQYKWSRVD 408

Query: 233 YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE---SVQ 289
                       PL  +    + G ++  +     D G Y C A+N FG+   E    ++
Sbjct: 409 G----------KPLPPRSHISNYGRVLKIEKVNYGDAGKYKCVATNAFGAAAGEVHVKLR 458

Query: 290 LAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYW-ARDYFPNFVEEDKRVFVS 348
                + + + +  P   N ++          +Y  V ++  A+   P  +  +KR  + 
Sbjct: 459 APPSILQDLHDRLIPTESNVSF--ECLLSNADSYSSVEWFKDAKPIVPLLLPAEKRKRLR 516

Query: 349 YD-GALYFSALEQIDAGNYSCNVQSKVS--------DTGRNGPFFPLKVFPHSNFQQLKF 399
            D   L+    ++ D+G Y C V + V             + P FP    P   F  L  
Sbjct: 517 IDHNILHLKMADESDSGVYQCVVSNDVGSSSSSSLLTVKDSAPIFPPNAMPRKVFAAL-- 574

Query: 400 PNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNV 458
                         G  V + C+    P     W    GS LP+     + + I++I  V
Sbjct: 575 --------------GSTVSIPCIFEASPRFHGKWADAGGSRLPQKGRIRDEDGIMSIEKV 620

Query: 459 KVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA-DLTWTCE-AFGVP 516
             ED G + C A N      + V + +  +P+      D+   N + ++  TCE +   P
Sbjct: 621 LHEDAGLFFCTAHNKLGKSHAQVQLIVMNKPSIKTNYLDEETVNMSCEVELTCENSAECP 680

Query: 517 DVTYSW 522
           +  + W
Sbjct: 681 EALFEW 686



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/414 (21%), Positives = 153/414 (36%), Gaps = 44/414 (10%)

Query: 394 FQQLKFPNNFPKT--------FPEAPKAGDKVRLECVAFGYPVPSYNWTRRG----SPLP 441
           FQQ   P   PK         +    +  D + L C   G P P+ +W +      SP  
Sbjct: 154 FQQKLLPIGAPKISLTGQSEIYFHPRQDADYIALPCTVQGNPKPTVSWYKNDVEVLSPSM 213

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
            N  +      L +P         + C A N    + S     I  +P+F  P     +D
Sbjct: 214 SNVSYLLSGGNLLVPASSSLAYSSFHCTAKNSLGEVRSP---PILLKPSFIDPFRPHRLD 270

Query: 502 ------NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYL 554
                   A L     A     +T+SW        S    L   +R FI  D  L   ++
Sbjct: 271 VYSLATGGAKLDCDAPAHQPKSLTFSWLHGA----STDRILSQNERKFISLDGTLFFSFV 326

Query: 555 NPERDPAMYQCR-AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE----------G 603
             E D   Y C  +    ++ +     R+++  P       + +  + +          G
Sbjct: 327 TSE-DEDSYACSLSVYSTQSGHYGPFFRLISSTPKLVNSTFQPKLDSSQPQIFPEDPKIG 385

Query: 604 GNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTAT 661
            ++ + C   A P P++ W + DG  +    R  I   G +L I  V+  D+G Y C AT
Sbjct: 386 DSIYLECFAYANPIPQYKWSRVDGKPLPP--RSHISNYGRVLKIEKVNYGDAGKYKCVAT 443

Query: 662 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 721
           N  G    +  + +   PS  + L  ++ I    N+   C     +    +  W  +   
Sbjct: 444 NAFGAAAGEVHVKLRAPPSILQDLHDRL-IPTESNVSFECLLSNADSYS-SVEWFKDAKP 501

Query: 722 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
           I  + L   +   + ID  +L +  A  +D+G Y+CVV + VG  S+ + + V+
Sbjct: 502 IVPLLLPAEKRKRLRIDHNILHLKMADESDSGVYQCVVSNDVGSSSSSSLLTVK 555



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 118/309 (38%), Gaps = 49/309 (15%)

Query: 499 HMDNQAD-LTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
           H    AD +   C   G P  T SW++N  E+L+    P      Y +    L +    P
Sbjct: 177 HPRQDADYIALPCTVQGNPKPTVSWYKNDVEVLS----PSMSNVSYLLSGGNLLV----P 228

Query: 557 ERDPAMY---QCRAKNQLKTRYSSAQLRVLTLKPSFKK--RPLESETYAGEGGNVTIFCN 611
                 Y    C AKN L    S   L    LKPSF    RP   + Y+   G   + C+
Sbjct: 229 ASSSLAYSSFHCTAKNSLGEVRSPPIL----LKPSFIDPFRPHRLDVYSLATGGAKLDCD 284

Query: 612 -PEAAPKP-KFVWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
            P   PK   F W    +   I+    R+ I  +G L  S V+ +D   Y+C+ +     
Sbjct: 285 APAHQPKSLTFSWLHGASTDRILSQNERKFISLDGTLFFSFVTSEDEDSYACSLSVYSTQ 344

Query: 667 DESKG---RLIVLHGPSYYEQLPPKITIAAHR----------NLQLRCSAHTEELLDVAY 713
               G   RLI            PK+  +  +          ++ L C A+   +    Y
Sbjct: 345 SGHYGPFFRLISSTPKLVNSTFQPKLDSSQPQIFPEDPKIGDSIYLECFAYANPI--PQY 402

Query: 714 IWTHNGVRIGNMDLNELETPNINID--GGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W+    R+    L     P  +I   G +L+I   ++ DAG+Y+CV  +  G  + +  
Sbjct: 403 KWS----RVDGKPL----PPRSHISNYGRVLKIEKVNYGDAGKYKCVATNAFGAAAGEVH 454

Query: 772 VIVEGPPGL 780
           V +  PP +
Sbjct: 455 VKLRAPPSI 463


>gi|109035955|ref|XP_001097680.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Macaca mulatta]
          Length = 1199

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 200/752 (26%), Positives = 326/752 (43%), Gaps = 60/752 (7%)

Query: 254 SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGK 313
           SG   I N+      +G Y C ASNK G  +SE ++     + +F  ++   +  +    
Sbjct: 63  SGTFRIPNEGHISHFQGKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDP 122

Query: 314 AMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS 372
            +  C+PP   P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   +
Sbjct: 123 IVLPCNPPKGLPPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAA 181

Query: 373 --KVSDTGRNGPF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-- 413
             ++    +  P    +    H+N               +Q K     P T   +  +  
Sbjct: 182 FPRLRTIVQKMPMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSIT 241

Query: 414 ---GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICR 469
              G+ + LEC A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C 
Sbjct: 242 ILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCT 301

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           ASN          + ++  P +T           ++    CEA G P  T  W  NG  +
Sbjct: 302 ASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPI 361

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           ++        D  F ++  ++   L P    A+YQC A N   T  +SA + V+ ++P  
Sbjct: 362 DNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILASANVDVVDVRPLI 415

Query: 590 KKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISP 647
           + +  + E YA   G +  + C   A+P+    W+K        GRR  +++NG L I+ 
Sbjct: 416 QTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINR 473

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
            + +D+G YSC   N  G       L + +  +     P    I     L+L C +  + 
Sbjct: 474 TTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDL 532

Query: 708 LL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 765
            L   +   W+ +G      ++N  E   I IDG  L I+N +  D G Y C   + +  
Sbjct: 533 HLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDS 589

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STW 823
            +  T V V   P  P  + + E    S  + W  G  +   I+ Y +    N      W
Sbjct: 590 AADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW 649

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
                    +E+ R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP  
Sbjct: 650 ---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 699

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYG 942
            P + P  I     +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  + 
Sbjct: 700 APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH- 758

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
                 +R+ +   Y  Y+VKVQAIN +G GP
Sbjct: 759 -----TLRVMTPAVYAPYDVKVQAINQLGSGP 785



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 228/597 (38%), Gaps = 79/597 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 340 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 399

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + +S  + +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 400 ILASANVDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 451

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA--------QLRVL 583
           E  PLE + RY + DN         E D   Y C  +N +     +A        QLRV 
Sbjct: 452 EAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRVS 510

Query: 584 TLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFE 639
              P   K   LE    +         C+       K  W KDG    I G+   R I +
Sbjct: 511 PKNPRIPKLHMLELHCESK--------CDLHLKHSLKLSWSKDGEAFEINGTEDGRIIID 562

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
             NL IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L
Sbjct: 563 GANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRL 620

Query: 700 RCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
              A  +   +++ YI    G +       EL          +L +  A F    ++  +
Sbjct: 621 SWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVI 677

Query: 759 VKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHY 811
             + VG+   ++ +   E PP  P      ++V         I+W          P   Y
Sbjct: 678 AVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 737

Query: 812 KIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELG 867
           ++        TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG
Sbjct: 738 RV--------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLG 782

Query: 868 YGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            G    P+PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I 
Sbjct: 783 SG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQIN 838

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           W K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 839 WWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 895



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 123/336 (36%), Gaps = 55/336 (16%)

Query: 431 YNWTRRGSPLPRNAYFENFNRILT--------IPNVK--VEDQGEYICRASNDRS-ALES 479
           + WT+ G+P     +F + +RI+T        IPN       QG+Y C ASN    A+  
Sbjct: 41  FTWTKDGNPF----HFTD-HRIITSNNSGTFRIPNEGHISHFQGKYRCFASNKLGIAMSE 95

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQAD-LTWTCEA-FGVPDVTYSWFRNGELLNSETLPLE 537
            +   + + P F     D     + D +   C    G+P +   W  N EL + E    +
Sbjct: 96  EIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIYWM-NIELEHIE----Q 150

Query: 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAK-----------------NQLK-TRYSSAQ 579
           D+  Y  Q   L    +  +     Y C A                  N LK    SS+ 
Sbjct: 151 DERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSSS 210

Query: 580 LRVLTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKFVWKKDGNI 628
             + +   S K+R    L   T +G   ++TI         C  E  P P+  W K G  
Sbjct: 211 TEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGD 270

Query: 629 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
           +  G   K      L I  VS  D G Y CTA+N  G       +IV   P + ++ P  
Sbjct: 271 LPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQS 329

Query: 689 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
              +   N  L C A  E    +   W  NG  I N
Sbjct: 330 AVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPIDN 363


>gi|237858652|ref|NP_001153796.1| neurofascin isoform 8 precursor [Gallus gallus]
          Length = 1064

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 226/846 (26%), Positives = 366/846 (43%), Gaps = 82/846 (9%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH+L++     +  +D     ++P+ P   KQ   D + D       ++I + C A G P
Sbjct: 19  LHHLIS---AIEVPLDSNIQSELPQPPTITKQSVKDYIVDPR-----DNIFIECEAKGNP 70

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKAS 277
            P++ W +             +   D + ++    G L+I+     R  +  G Y C A 
Sbjct: 71  VPTFSWTRN--------GKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEYQCFAR 122

Query: 278 NKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           N +G+ +S  + L       +  ++   I  ++    ++ C+PP   P    +W      
Sbjct: 123 NDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSSM- 181

Query: 337 NFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ 395
             + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + LKV       
Sbjct: 182 EPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGVT 241

Query: 396 QL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR-NAYFENFNRI 452
           +    F   +  +  +    G  + LEC+A G P P   W ++G  LP      ENFN+ 
Sbjct: 242 ETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKA 301

Query: 453 LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEA 512
           L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A
Sbjct: 302 LRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRA 361

Query: 513 FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQL 571
            G P  +  W  NGE +        +  R    D   TI + + +    A+YQC A N+ 
Sbjct: 362 NGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQIGSSAVYQCNASNEH 415

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NII 629
               ++A + VL + P     P        +     + C    +P P   W K+G  N++
Sbjct: 416 GYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNML 474

Query: 630 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
             GG  K  ENG+L +S   ++D GIY+C ATN+ G  E++ RL V   P+   + P   
Sbjct: 475 -DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRIVRGPEDQ 532

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNA 747
            +      +L C    +  L +   W  +   + IGN    E        D GL  I   
Sbjct: 533 VVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DDGLT-IYGV 583

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGPPG------------LPGGVQVVEVHKTSAT 795
           +  D G+Y CV  + + K S K  + V   P              P  +++ ++ + S  
Sbjct: 584 AEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSDLAERSVK 643

Query: 796 IQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
           + W  G  N  PIT Y +    +     TW N S         RY G   +++ + L P+
Sbjct: 644 LTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSALLS-LSPY 693

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
             Y+F+VIA N++G   PS PS +Y T   +P   P+ + G G +  ++ I+W PL   +
Sbjct: 694 VNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQ 753

Query: 914 QNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
              PN+ Y + WR+++    + +ET+K   +V   V   P    Y  YE+KVQA ND G 
Sbjct: 754 AYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQAENDFGR 807

Query: 973 GPESEV 978
            PE E 
Sbjct: 808 APEPET 813


>gi|237858643|ref|NP_001153793.1| neurofascin isoform 5 precursor [Gallus gallus]
          Length = 1069

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 226/846 (26%), Positives = 366/846 (43%), Gaps = 82/846 (9%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH+L++     +  +D     ++P+ P   KQ   D + D       ++I + C A G P
Sbjct: 19  LHHLIS---AIEVPLDSNIQSELPQPPTITKQSVKDYIVDPR-----DNIFIECEAKGNP 70

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKAS 277
            P++ W +             +   D + ++    G L+I+     R  +  G Y C A 
Sbjct: 71  VPTFSWTRN--------GKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEYQCFAR 122

Query: 278 NKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           N +G+ +S  + L       +  ++   I  ++    ++ C+PP   P    +W      
Sbjct: 123 NDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSSM- 181

Query: 337 NFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ 395
             + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + LKV       
Sbjct: 182 EPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGVT 241

Query: 396 QL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR-NAYFENFNRI 452
           +    F   +  +  +    G  + LEC+A G P P   W ++G  LP      ENFN+ 
Sbjct: 242 ETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKA 301

Query: 453 LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEA 512
           L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A
Sbjct: 302 LRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRA 361

Query: 513 FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQL 571
            G P  +  W  NGE +        +  R    D   TI + + +    A+YQC A N+ 
Sbjct: 362 NGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQIGSSAVYQCNASNEH 415

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NII 629
               ++A + VL + P     P        +     + C    +P P   W K+G  N++
Sbjct: 416 GYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNML 474

Query: 630 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
             GG  K  ENG+L +S   ++D GIY+C ATN+ G  E++ RL V   P+   + P   
Sbjct: 475 -DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRIVRGPEDQ 532

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNA 747
            +      +L C    +  L +   W  +   + IGN    E        D GL  I   
Sbjct: 533 VVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DDGLT-IYGV 583

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGPPG------------LPGGVQVVEVHKTSAT 795
           +  D G+Y CV  + + K S K  + V   P              P  +++ ++ + S  
Sbjct: 584 AEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSDLAERSVK 643

Query: 796 IQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
           + W  G  N  PIT Y +    +     TW N S         RY G   +++ + L P+
Sbjct: 644 LTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSALLS-LSPY 693

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
             Y+F+VIA N++G   PS PS +Y T   +P   P+ + G G +  ++ I+W PL   +
Sbjct: 694 VNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQ 753

Query: 914 QNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
              PN+ Y + WR+++    + +ET+K   +V   V   P    Y  YE+KVQA ND G 
Sbjct: 754 AYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQAENDFGR 807

Query: 973 GPESEV 978
            PE E 
Sbjct: 808 APEPET 813


>gi|71983656|ref|NP_001022014.1| Protein RIG-6, isoform d [Caenorhabditis elegans]
 gi|373219226|emb|CCD66510.1| Protein RIG-6, isoform d [Caenorhabditis elegans]
          Length = 1196

 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 241/982 (24%), Positives = 391/982 (39%), Gaps = 124/982 (12%)

Query: 1   MSLISSCLFIFVSFHSVFSQTIDELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS 60
           M ++  C+ IF+ F  V +  IDE    CP  W    D C R V +P   ++  K  C  
Sbjct: 1   MMMLIRCISIFLLFGFV-NALIDEAS--CPIGWQIASDQCVRIVIAPANLKHSKKY-CH- 55

Query: 61  LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAAFLP 120
                       E G +M                    S  L + +    L  L    L 
Sbjct: 56  -----------HEGGELM------------------DTSVTLLLEDVMDLLKNLHENGLS 86

Query: 121 EPADNVQRDYLAYSFSQSLKRW--GFERVTGMEP---LLFICEASIQKLHYLLNDDRTYQ 175
           EP  +V          Q+L R   G  ++  + P     FIC  +      LL     +Q
Sbjct: 87  EPTFHVG------GMGQALNRTEDGNYKIITINPSSHFPFICSLNKMARRSLL-----FQ 135

Query: 176 YGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 235
             +       +P G   I            R   + I L C   G P P+  W+K D   
Sbjct: 136 QKL-------LPVGAPQISLTGQSEIYFHPRHDADYIALPCTVQGNPKPTVAWYKND--- 185

Query: 236 DRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
              V  L   +S+  + LSGGNL++     +    S+HC A N  G + S  + L   FI
Sbjct: 186 ---VEVLSPSMSNVSYLLSGGNLLVPASSTLA-YSSFHCTARNSLGEVRSPPILLKPSFI 241

Query: 296 GEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFPN-FVEEDKRVFVSYDGAL 353
             F   R         G  + CD P + P  + Y W      +  + +++R F+S DG L
Sbjct: 242 DPFRPHRLDVYSLATGGAKLDCDAPAHQPKSLTYSWLYGSSTDRILSQNERKFISLDGTL 301

Query: 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNF----PKTFPE 409
           +FS +   D  +Y+C++    + +G  GPFF L +          FP       P+ FPE
Sbjct: 302 FFSYVTAEDEDSYACSLSVYSTQSGHYGPFFRL-ISSTPKLVNSTFPPKLDSTQPQIFPE 360

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTR-RGSPLPRNAYFENFNRILTIPNVKVEDQGEYIC 468
            PK GD + LEC A+  P+P Y W+R  G P+P  ++  N+ R+L I  V   D G+Y C
Sbjct: 361 DPKVGDSIYLECFAYASPLPQYKWSRVDGKPIPARSHISNYGRVLKIEKVNYGDAGKYKC 420

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD-VTYSWFRNGE 527
            A N   +    V + ++A P+    L D+ +  ++++++ C         +  WF++ +
Sbjct: 421 VAMNAFGSAAGEVHVKLRAPPSILQGLHDRLVPTESNVSFECLLSNADSYSSVEWFKDAK 480

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
            +    LP E + R  I  NVL +++ + E D  +YQC A N + +  SSA L V    P
Sbjct: 481 PIVPLLLPAEKRKRLKIDHNVLHLKFAD-ETDSGVYQCVASNDVGSSSSSALLTVKDSAP 539

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP 647
            F    +  + +A  G  V+I C  EA+P+    W   G        R   E G + I  
Sbjct: 540 VFPPNAMSRKVFAAFGSTVSIPCIFEASPRFHGKWADAGGSKLPQKGRIRDEEGVISIEK 599

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
           V  +D+G++ CTA N  G   ++ +LIV++ PS       + T+     ++L C  ++ E
Sbjct: 600 VLHEDAGLFFCTAHNKLGKAHAQVQLIVVNKPSIKTNFLDEETVNMSCEVELTCE-NSAE 658

Query: 708 LLDVAYIWTHNG---------------VRIGNMDLNELETPNINIDGGLLEITNASFADA 752
             +  + W  N                 + G+   +  +  ++ +   L     A     
Sbjct: 659 CPEALFEWKINDRPAKEYPSLKSKVHEKKSGHKGRHLKQKVDLEVPKSL-----AGSRQI 713

Query: 753 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH-------KTSATIQW------T 799
           G + C   S  G  S   T      P LP  + +           K    ++W       
Sbjct: 714 GRFAC--SSLYGGSSEFVT-----KPQLPSPIALTVEQMDEDGKKKKMFRLRWRLPPQHR 766

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-EVDRYTGRKEASIENVLVPWSTYEF 858
           D   +   +  Y +  RT  N  W      ++G  E D  T      +EN L+P + Y+F
Sbjct: 767 DTRDHSPKVEGYLVELRTRKNRKWRAAERQLVGNMEKDSIT------VEN-LLPNTEYQF 819

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP-REKQNAP 917
           +V +      GEPS PS    T    P +    +         L + W+P+   ++ +  
Sbjct: 820 RVRSVESAAIGEPSIPSDWVKTAPGAPSETIDNLKWRSLDSQTLLVEWQPIEIGQESSGD 879

Query: 918 NIYYKIFWRKKNDTEFQSETLK 939
           N+ Y++ W +    +  ++ +K
Sbjct: 880 NLRYRVSWSEATVGKNATDDMK 901


>gi|237858646|ref|NP_001153794.1| neurofascin isoform 6 precursor [Gallus gallus]
          Length = 1235

 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 228/844 (27%), Positives = 365/844 (43%), Gaps = 78/844 (9%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH+L++     +  +D     ++P+ P   KQ   D + D       ++I + C A G P
Sbjct: 19  LHHLIS---AIEVPLDSNIQSELPQPPTITKQSVKDYIVDPR-----DNIFIECEAKGNP 70

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNK 279
            P++ W +      +      DP    R     G L+I+     R  +  G Y C A N 
Sbjct: 71  VPTFSWTR----NGKFFNVAKDPKVSMR--RRSGTLVIDFHGGGRPDDYEGEYQCFARND 124

Query: 280 FGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNF 338
           +G+ +S  + L       +  ++   I  ++    ++ C+PP   P    +W        
Sbjct: 125 YGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSSM-EP 183

Query: 339 VEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL 397
           + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + LKV       + 
Sbjct: 184 IHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGVTET 243

Query: 398 KFPNNFP--KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR-NAYFENFNRILT 454
                +P   +  +    G  + LEC+A G P P   W ++G  LP      ENFN+ L 
Sbjct: 244 TPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALR 303

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG 514
           I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G
Sbjct: 304 ISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANG 363

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKT 573
            P  +  W  NGE +        +  R    D   TI + + +    A+YQC A N+   
Sbjct: 364 NPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQIGSSAVYQCNASNEHGY 417

Query: 574 RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NIIGS 631
             ++A + VL + P     P        +     + C    +P P   W K+G  N++  
Sbjct: 418 LLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNML-D 475

Query: 632 GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 691
           GG  K  ENG+L +S   ++D GIY+C ATN+ G  E++ RL V   P+   + P    +
Sbjct: 476 GGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRIVRGPEDQVV 534

Query: 692 AAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASF 749
                 +L C    +  L +   W  +   + IGN    E        D GL  I   + 
Sbjct: 535 KRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DDGLT-IYGVAE 585

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGPPG------------LPGGVQVVEVHKTSATIQ 797
            D G+Y CV  + + K S K  + V   P              P  +++ ++ + S  + 
Sbjct: 586 KDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSDLAERSVKLT 645

Query: 798 WTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
           W  G  N  PIT Y +    +     TW N S         RY G   +++ + L P+  
Sbjct: 646 WIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSALLS-LSPYVN 695

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           Y+F+VIA N++G   PS PS +Y T   +P   P+ + G G +  ++ I+W PL   +  
Sbjct: 696 YQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAY 755

Query: 916 APNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            PN+ Y + WR+++    + +ET+K   +V   V   P    Y  YE+KVQA ND G  P
Sbjct: 756 GPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQAENDFGRAP 809

Query: 975 ESEV 978
           E E 
Sbjct: 810 EPET 813


>gi|237858639|ref|NP_001004709.2| neurofascin isoform 3 precursor [Gallus gallus]
          Length = 1144

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 226/846 (26%), Positives = 366/846 (43%), Gaps = 82/846 (9%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH+L++     +  +D     ++P+ P   KQ   D + D       ++I + C A G P
Sbjct: 19  LHHLIS---AIEVPLDSNIQSELPQPPTITKQSVKDYIVDPR-----DNIFIECEAKGNP 70

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKAS 277
            P++ W +             +   D + ++    G L+I+     R  +  G Y C A 
Sbjct: 71  VPTFSWTRN--------GKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEYQCFAR 122

Query: 278 NKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           N +G+ +S  + L       +  ++   I  ++    ++ C+PP   P    +W      
Sbjct: 123 NDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSSM- 181

Query: 337 NFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ 395
             + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + LKV       
Sbjct: 182 EPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGVT 241

Query: 396 QLKFPNNFP--KTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR-NAYFENFNRI 452
           +      +P   +  +    G  + LEC+A G P P   W ++G  LP      ENFN+ 
Sbjct: 242 ETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKA 301

Query: 453 LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEA 512
           L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A
Sbjct: 302 LRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRA 361

Query: 513 FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQL 571
            G P  +  W  NGE +        +  R    D   TI + + +    A+YQC A N+ 
Sbjct: 362 NGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQIGSSAVYQCNASNEH 415

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NII 629
               ++A + VL + P     P        +     + C    +P P   W K+G  N++
Sbjct: 416 GYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNML 474

Query: 630 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
             GG  K  ENG+L +S   ++D GIY+C ATN+ G  E++ RL V   P+   + P   
Sbjct: 475 -DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRIVRGPEDQ 532

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNA 747
            +      +L C    +  L +   W  +   + IGN    E        D GL  I   
Sbjct: 533 VVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DDGLT-IYGV 583

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGPPG------------LPGGVQVVEVHKTSAT 795
           +  D G+Y CV  + + K S K  + V   P              P  +++ ++ + S  
Sbjct: 584 AEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSDLAERSVK 643

Query: 796 IQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
           + W  G  N  PIT Y +    +     TW N S         RY G   +++ + L P+
Sbjct: 644 LTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSALLS-LSPY 693

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
             Y+F+VIA N++G   PS PS +Y T   +P   P+ + G G +  ++ I+W PL   +
Sbjct: 694 VNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQ 753

Query: 914 QNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
              PN+ Y + WR+++    + +ET+K   +V   V   P    Y  YE+KVQA ND G 
Sbjct: 754 AYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQAENDFGR 807

Query: 973 GPESEV 978
            PE E 
Sbjct: 808 APEPET 813


>gi|432865237|ref|XP_004070484.1| PREDICTED: neural cell adhesion molecule L1-like [Oryzias latipes]
          Length = 1276

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 206/803 (25%), Positives = 338/803 (42%), Gaps = 93/803 (11%)

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS------------GG 256
           + +  +SC A G P PS+ W K+ +          DP S+    +S            G 
Sbjct: 67  VEEFIMSCEASGNPQPSFTWTKDGHK--------FDPRSEPHLKVSEHPGSFEFKASNGS 118

Query: 257 NLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF-----NLKRAPEIGNQNW 311
           N++     Q    G Y C A+N  G+ +S+   L+   +        ++ RA E  N   
Sbjct: 119 NMVNLKSYQ----GKYVCYATNNLGTAMSKEATLSIDGLPSLQKEKDSIFRATEGSNM-- 172

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNV 370
              + C+PP +      +W  D+    +E   RV V  DG LYF+ L+  D+  +Y CN+
Sbjct: 173 --TLKCNPPKSSMVPVIHWM-DWKLRHIELSDRVMVGKDGNLYFANLKTTDSRDDYICNL 229

Query: 371 QSKVSDTGRNGPFFPLKVFP-----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
           Q   + T      F L+V P     H+   Q+  P     T+      G  + LEC+A G
Sbjct: 230 QYMETRTILTKDPFTLEVKPSNSIVHNRRPQMVTPTGSSSTY--LALRGQTLDLECIAQG 287

Query: 426 YPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            P P   W R+   L  +    E+FN  L   NV   D GEY C A N +   + +  ++
Sbjct: 288 LPTPRVTWLRKDGELSESRTVKESFNHRLRFLNVSESDGGEYQCIADNTQGKAKHTFMLT 347

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++A P +      +       +   C+A G P  T  W  NG  L       E+  R  +
Sbjct: 348 VEAAPYWIKEPVSQLYAAGETVRLDCQADGTPSPTIRWTVNGARLP------ENSKRIRV 401

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EG 603
           +   L + ++  E D A+YQC A N+  T +++  + V+ L P    +  + E Y+  EG
Sbjct: 402 ESGSLILEHVVFE-DTAVYQCLASNKHGTIFTNTHVYVINLPPQILTK--DGEIYSHIEG 458

Query: 604 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN- 662
               + C    +PKPK  W+++G+++ +  R  +  +G L I+ V+ DD G+Y+C   N 
Sbjct: 459 QRALLQCETFGSPKPKVTWEREGSLLLAEPRVNLLTSGALEIANVTLDDKGLYNCNVQNS 518

Query: 663 ---VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
              +    E   R ++L  P   +  P    +         C A    L+D  +      
Sbjct: 519 NLSITAELEVFNRTVILSMPQDLKAQPGTSAV-------FTCKA----LVDPHFRDPQIQ 567

Query: 720 VRIGNMDLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
            R  N  L E +       D   L I + +  D G Y C V +++       T+ +   P
Sbjct: 568 WRKDNQKLQESISDEKYTFDESDLIIADVNADDEGVYTCEVITSLDMAKADGTLTLIDRP 627

Query: 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 838
             P  + + +      T++WT G  +  P+  Y I           N+ E    K     
Sbjct: 628 DPPSRLLLADPDSRVVTLRWTPGDDHNSPVKDYVIEFEDQ------NLKERGWQKLKKVK 681

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
           + +  A +   L P+ +Y+F++ A NE+G   PS PS  YNT A+ P + P  +      
Sbjct: 682 SNKDHAVLS--LRPYMSYKFRISAINEVGNSGPSQPSDIYNTSAEAPDKNPENVRSESVH 739

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT------EFQSETLKEYGNVGIAVVRIP 952
              L I+W+ + + + N P+ +YK+ WR+   +            L ++G+VG       
Sbjct: 740 PNTLVIAWKEMEKHEFNGPDFHYKVMWRRAVGSGPIWHENITKVPLVDFGDVG------- 792

Query: 953 SEFYYTEYEVKVQAINDVGPGPE 975
               +  +EVKVQA N+ G GPE
Sbjct: 793 ---SFAAFEVKVQAANEKGDGPE 812


>gi|149036850|gb|EDL91468.1| contactin 4, isoform CRA_c [Rattus norvegicus]
          Length = 586

 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 165/539 (30%), Positives = 236/539 (43%), Gaps = 76/539 (14%)

Query: 346 FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPK 405
            VS +  L F+ LE     N+    +S VS     G        PHS     ++      
Sbjct: 109 IVSREAKLQFAYLE-----NFKTRTRSTVSVRRGQGMVLLCGPPPHSGGVMGEYEPKIEV 163

Query: 406 TFPEAPKA--GDKVRLECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVED 462
            FPE   A  G  V+LEC A G PVP+  W R  G P+ R A     + IL IPN + ED
Sbjct: 164 QFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSSGILEIPNFQQED 223

Query: 463 QGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSW 522
            G Y C A N R    +   ++  A+PN+   + D H+  +  + W C+A G P  TY W
Sbjct: 224 AGSYECVAENSRGKNIAKGQVTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRW 283

Query: 523 FRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
            +NG+       PL  ++R  I+   L I  +N   D  MYQC A+N+    Y+SA+L V
Sbjct: 284 LKNGD-------PLLTRERIQIEQGTLNITIVNLS-DAGMYQCVAENKHGVIYASAELSV 335

Query: 583 LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN 642
           +   P F +  L+  T    GG V I C P+A+P+P + W+K   I+    R  I E+GN
Sbjct: 336 IAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGN 395

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  V++ D+G Y+C ATN  G   S G  +V+  P+     P  + +    ++ L C 
Sbjct: 396 LRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPSSMDVTVGESIVLPCQ 454

Query: 703 AHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
              +  LD+ + WT NG  I  + D +  E        G L I N     AG+Y C+V++
Sbjct: 455 VTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQT 514

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 821
           +V K+S    +IV  P                   +  DG T                  
Sbjct: 515 SVDKLSAAADLIVRVP-------------------ELVDGKT------------------ 537

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
                +  V+G                 L PW  YEF+ +A N +G GEPS PS +  T
Sbjct: 538 ----FTATVVG-----------------LNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 575



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 205/517 (39%), Gaps = 78/517 (15%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 25  GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 75  FRYSVVEGSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDY---FPNFVEEDKRVFVSYD-------------- 350
            +  G  + C PP +  GV   +       FP  V  +K   V  +              
Sbjct: 135 RRGQGMVLLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWR 194

Query: 351 -----------------GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393
                            G L     +Q DAG+Y C  +   +  G+N     +  +   N
Sbjct: 195 RADGKPIARKARRHKSSGILEIPNFQQEDAGSYECVAE---NSRGKNIAKGQVTFYAQPN 251

Query: 394 FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRIL 453
           + Q+   N+      E+      V  EC A G P P+Y W + G PL      +     L
Sbjct: 252 WVQII--NDIHVAMEES------VFWECKANGRPKPTYRWLKNGDPLLTRERIQIEQGTL 303

Query: 454 TIPNVKVEDQGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDK--HMDNQADLTWTC 510
            I  V + D G Y C A N    + +S  +S+ AE P+F+  L  +   +    ++   C
Sbjct: 304 NITIVNLSDAGMYQCVAENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKVGGEVVIEC 363

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKN 569
           +    P   Y+W +  E+       L + +R  I ++   +R +N  + D   Y C A N
Sbjct: 364 KPKASPRPVYTWRKGREI-------LRENERITISEDG-NLRIINVTKSDAGSYTCIATN 415

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
              T  S+    V+   P+    P  S +   GE   +      + +    F W  +G++
Sbjct: 416 HFGTASSTGN--VVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHL 473

Query: 629 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSC 658
           I        FE        G+L+I  +    +G Y C
Sbjct: 474 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVC 510



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 124/313 (39%), Gaps = 71/313 (22%)

Query: 208 ILNDITLS--------CYAGGYPNPSYEWFKEDYVQDRLVANLIDPL-SDKRFTLSGGNL 258
           I+NDI ++        C A G P P+Y W K             DPL + +R  +  G L
Sbjct: 255 IINDIHVAMEESVFWECKANGRPKPTYRWLKNG-----------DPLLTRERIQIEQGTL 303

Query: 259 ---IINDPRQVEDRGSYHCKASNKFG--------SIISESVQLAFGFIGEFNLKRAPEIG 307
              I+N    + D G Y C A NK G        S+I+ES   +   +    L +     
Sbjct: 304 NITIVN----LSDAGMYQCVAENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKV---- 355

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
               G+ +    P   P   Y W +      + E++R+ +S DG L    + + DAG+Y+
Sbjct: 356 ---GGEVVIECKPKASPRPVYTWRKGR--EILRENERITISEDGNLRIINVTKSDAGSYT 410

Query: 368 C---NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VA 423
           C   N     S TG      P KV        +  P++   T       G+ + L C V 
Sbjct: 411 CIATNHFGTASSTGNVVVKDPTKV--------MVPPSSMDVT------VGESIVLPCQVT 456

Query: 424 FGYPVP-SYNWTRRGSPLPRNAYFENFNRI--------LTIPNVKVEDQGEYICRASNDR 474
             + +   + WT  G  +  +   ++F R+        L I N++++  G+Y+C      
Sbjct: 457 HDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSV 516

Query: 475 SALESSVTISIQA 487
             L ++  + ++ 
Sbjct: 517 DKLSAAADLIVRV 529



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 102/264 (38%), Gaps = 41/264 (15%)

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 639
           V   +PS    PL+SE        V + C  +  PKP   WK +G    IG   R  + E
Sbjct: 27  VFVQEPSHVMFPLDSEEK-----KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
              L+ +P    DSG Y C ATN  G   S+  +L   +  ++  +    +++   + + 
Sbjct: 82  GSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141

Query: 699 LRCS---------AHTEELLDVAYIWTHNGVRIGNMDLNELE----TPNI---NIDG--- 739
           L C             E  ++V +  T    +   + L         P I     DG   
Sbjct: 142 LLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPI 201

Query: 740 ----------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-E 788
                     G+LEI N    DAG YECV +++ GK   K  V     P     VQ++ +
Sbjct: 202 ARKARRHKSSGILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNW---VQIIND 258

Query: 789 VHKTSATIQWTDGATNGRPITHYK 812
           +H       + +   NGRP   Y+
Sbjct: 259 IHVAMEESVFWECKANGRPKPTYR 282


>gi|339246759|ref|XP_003375013.1| putative immunoglobulin domain protein [Trichinella spiralis]
 gi|316971717|gb|EFV55461.1| putative immunoglobulin domain protein [Trichinella spiralis]
          Length = 1167

 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 208/819 (25%), Positives = 327/819 (39%), Gaps = 83/819 (10%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            P  I QP D +F L   +    + L C A   P+ ++   K  Y   R     I    D
Sbjct: 141 APKLIHQPEDSLFFLDIPT--QTVRLKCEAEYNPHIAH---KPIYSWHRGSGGPIHSAMD 195

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            R T   G L I +    +D GSY CK  N +G+++S    +                  
Sbjct: 196 SRITQIEGELYIRNVSN-KDVGSYFCKVKNHYGTVVSRKASVRTAL-------------- 240

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
                             +Y W       F++E +R+F + DG LYFS   + D   Y+C
Sbjct: 241 ----------------SASYAWLYKTSNMFLQESERIFTAKDGTLYFSYYTKADEEQYAC 284

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-----GDKVRLECVA 423
           ++      TG  GPFF L+    +   Q  F   FP+  P   ++     G ++ LEC A
Sbjct: 285 SLLISELQTGHYGPFFRLRTKSETYPSQDGFSPYFPRELPRVWQSNQALEGKEIVLECFA 344

Query: 424 FGYPVPSYNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
           FG P P+Y W R   P+ +    F +F+R L I N  V+  G Y C A N+  ++   V 
Sbjct: 345 FGRPSPTYQWIRVDKPMDKQTVQFRSFSRQLRILNATVQHSGIYRCIADNEYGSVSKEVR 404

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWT--CEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           + + A P  +   T+ +++ +   TWT  CEA G P+V Y W +NG   NS  LP ED+ 
Sbjct: 405 LEVFASPKIS-STTENYVEEKGK-TWTLWCEATGKPEVHYEWLKNGTAFNSLLLPQEDRK 462

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           R  I  N L I++L  E D  +YQC A NQ      + +L V       K R    + + 
Sbjct: 463 RILIDKNRLQIKHLR-EEDSGIYQCLAFNQFGQDILTTELYVRQTPDKIKWREFHKDFHV 521

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGN-IIGSGG-----RRKIFENGNLLI--SPVSRDD 652
            E  +  + C           W   G  I+G        R  + + G+LL   +   RD 
Sbjct: 522 LENSDAILRCADRTGH-----WSSRGQWIVGKSALQYDQRLSLSKAGDLLTIKNVTKRDS 576

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC----SAHTEEL 708
             +Y C           + RL+V H   Y    P    +   +NL L C    + +    
Sbjct: 577 DTVYECRIAYRQAGIIQRFRLVVYHD-FYIRIRPANKHVLVGQNLTLSCKYAWTNNAGST 635

Query: 709 LDVAYIWTHNGVRIGNM-DLNELETPNINIDGGLLEITNASFADAGEYECVVKST-VGKI 766
            ++A  W+ NG  I  +   N      +   G  L I+  S    G Y C V    +   
Sbjct: 636 AEIAPWWSFNGYPIEQLRQFNSATLLPLPGSGTQLTISPISLLHHGNYSCHVPILPLWTA 695

Query: 767 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTW 823
           S  + V VEG P  P  V       +   ++W    +      PI+ +++ ++T +   W
Sbjct: 696 SASSEVTVEGAPLAPIEVIAQPQANSRIYLRWKIPNEQEKRTLPISKFRVESKTTYAEGW 755

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
             V +       D      E ++E  ++P++ Y F+V A N +G+ + S  +P   T   
Sbjct: 756 KIVKD-------DIRWNLNETTVERDILPFNKYRFRVRAANSIGWSDASDATPWTETAPG 808

Query: 884 KPYQAPS-RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEY 941
            P      ++         ++I W+ LP+      ++ Y + WR   D    Q+E L   
Sbjct: 809 PPSVIEDVQLSAQVYHTSQITIQWKMLPKHLWGDSSLGYILEWRPVGDFRNTQTEKLPAT 868

Query: 942 GNVGIA----VVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            N  +      V+         YE+ ++  N+ G GP +
Sbjct: 869 TNSTLINLSYTVQTNETVPCKRYELYIRPYNNYGEGPNT 907


>gi|17532283|ref|NP_494861.1| Protein RIG-6, isoform b [Caenorhabditis elegans]
 gi|373219224|emb|CCD66508.1| Protein RIG-6, isoform b [Caenorhabditis elegans]
          Length = 1227

 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 197/752 (26%), Positives = 319/752 (42%), Gaps = 67/752 (8%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           I L C   G P P+  W+K D      V  L   +S+  + LSGGNL++     +    S
Sbjct: 196 IALPCTVQGNPKPTVAWYKND------VEVLSPSMSNVSYLLSGGNLLVPASSTLA-YSS 248

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYW 330
           +HC A N  G + S  + L   FI  F   R         G  + CD P + P  + Y W
Sbjct: 249 FHCTARNSLGEVRSPPILLKPSFIDPFRPHRLDVYSLATGGAKLDCDAPAHQPKSLTYSW 308

Query: 331 ARDYFPN-FVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
                 +  + +++R F+S DG L+FS +   D  +Y+C++    + +G  GPFF L + 
Sbjct: 309 LYGSSTDRILSQNERKFISLDGTLFFSYVTAEDEDSYACSLSVYSTQSGHYGPFFRL-IS 367

Query: 390 PHSNFQQLKFPNNF----PKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR-RGSPLPRNA 444
                    FP       P+ FPE PK GD + LEC A+  P+P Y W+R  G P+P  +
Sbjct: 368 STPKLVNSTFPPKLDSTQPQIFPEDPKVGDSIYLECFAYASPLPQYKWSRVDGKPIPARS 427

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
           +  N+ R+L I  V   D G+Y C A N   +    V + ++A P+    L D+ +  ++
Sbjct: 428 HISNYGRVLKIEKVNYGDAGKYKCVAMNAFGSAAGEVHVKLRAPPSILQGLHDRLVPTES 487

Query: 505 DLTWTCEAFGVPD-VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
           ++++ C         +  WF++ + +    LP E + R  I  NVL +++ + E D  +Y
Sbjct: 488 NVSFECLLSNADSYSSVEWFKDAKPIVPLLLPAEKRKRLKIDHNVLHLKFAD-ETDSGVY 546

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 623
           QC A N + +  SSA L V    P F    +  + +A  G  V+I C  EA+P+    W 
Sbjct: 547 QCVASNDVGSSSSSALLTVKDSAPVFPPNAMSRKVFAAFGSTVSIPCIFEASPRFHGKWA 606

Query: 624 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
             G        R   E G + I  V  +D+G++ CTA N  G   ++ +LIV++ PS   
Sbjct: 607 DAGGSKLPQKGRIRDEEGVISIEKVLHEDAGLFFCTAHNKLGKAHAQVQLIVVNKPSIKT 666

Query: 684 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG---------------VRIGNMDLN 728
               + T+     ++L C  ++ E  +  + W  N                 + G+   +
Sbjct: 667 NFLDEETVNMSCEVELTCE-NSAECPEALFEWKINDRPAKEYPSLKSKVHEKKSGHKGRH 725

Query: 729 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV---- 784
             +  ++ +   L     A     G + C   S  G  S   T      P LP  +    
Sbjct: 726 LKQKVDLEVPKSL-----AGSRQIGRFAC--SSLYGGSSEFVT-----KPQLPSPIALTV 773

Query: 785 -QVVEVHKTSATI--------QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-E 834
            Q+ E  K             Q  D   +   +  Y +  RT  N  W      ++G  E
Sbjct: 774 EQMDEDGKKKKMFRLRWRLPPQHRDTRDHSPKVEGYLVELRTRKNRKWRAAERQLVGNME 833

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
            D  T      +EN L+P + Y+F+V +      GEPS PS    T    P +    +  
Sbjct: 834 KDSIT------VEN-LLPNTEYQFRVRSVESAAIGEPSIPSDWVKTAPGAPSETIDNLKW 886

Query: 895 GGGKIGDLSISWEPLP-REKQNAPNIYYKIFW 925
                  L + W+P+   ++ +  N+ Y++ W
Sbjct: 887 RSLDSQTLLVEWQPIEIGQESSGDNLRYRVSW 918



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 85/386 (22%), Positives = 142/386 (36%), Gaps = 36/386 (9%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRG----SPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
            D + L C   G P P+  W +      SP   N  +      L +P         + C 
Sbjct: 193 ADYIALPCTVQGNPKPTVAWYKNDVEVLSPSMSNVSYLLSGGNLLVPASSTLAYSSFHCT 252

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMD------NQADLTWTCEAFGVPDVTYSWF 523
           A N    + S     I  +P+F  P     +D        A L     A     +TYSW 
Sbjct: 253 ARNSLGEVRSP---PILLKPSFIDPFRPHRLDVYSLATGGAKLDCDAPAHQPKSLTYSWL 309

Query: 524 RNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCR-AKNQLKTRYSSAQLR 581
                 +S    L   +R FI  D  L   Y+  E D   Y C  +    ++ +     R
Sbjct: 310 YG----SSTDRILSQNERKFISLDGTLFFSYVTAE-DEDSYACSLSVYSTQSGHYGPFFR 364

Query: 582 VLTLKPSFKKRPLESETYAGE----------GGNVTIFCNPEAAPKPKFVWKK-DGNIIG 630
           +++  P         +  + +          G ++ + C   A+P P++ W + DG  I 
Sbjct: 365 LISSTPKLVNSTFPPKLDSTQPQIFPEDPKVGDSIYLECFAYASPLPQYKWSRVDGKPIP 424

Query: 631 SGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
           +  R  I   G +L I  V+  D+G Y C A N  G    +  + +   PS  + L  ++
Sbjct: 425 A--RSHISNYGRVLKIEKVNYGDAGKYKCVAMNAFGSAAGEVHVKLRAPPSILQGLHDRL 482

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749
            +    N+   C     +    +  W  +   I  + L   +   + ID  +L +  A  
Sbjct: 483 -VPTESNVSFECLLSNADSYS-SVEWFKDAKPIVPLLLPAEKRKRLKIDHNVLHLKFADE 540

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVE 775
            D+G Y+CV  + VG  S+   + V+
Sbjct: 541 TDSGVYQCVASNDVGSSSSSALLTVK 566



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/332 (20%), Positives = 118/332 (35%), Gaps = 44/332 (13%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
           + I L C+A   P P Y+W + D            P+  +    + G ++  +     D 
Sbjct: 397 DSIYLECFAYASPLPQYKWSRVDG----------KPIPARSHISNYGRVLKIEKVNYGDA 446

Query: 270 GSYHCKASNKFGSIISE---SVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
           G Y C A N FGS   E    ++     +   + +  P   N ++          +Y  V
Sbjct: 447 GKYKCVAMNAFGSAAGEVHVKLRAPPSILQGLHDRLVPTESNVSF--ECLLSNADSYSSV 504

Query: 327 NYYW-ARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGR----- 379
            ++  A+   P  +  +KR  +  D   L+    ++ D+G Y C   + V  +       
Sbjct: 505 EWFKDAKPIVPLLLPAEKRKRLKIDHNVLHLKFADETDSGVYQCVASNDVGSSSSSALLT 564

Query: 380 ---NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR 436
              + P FP        F                   G  V + C+    P     W   
Sbjct: 565 VKDSAPVFPPNAMSRKVFAAF----------------GSTVSIPCIFEASPRFHGKWADA 608

Query: 437 -GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
            GS LP+     +   +++I  V  ED G + C A N      + V + +  +P+     
Sbjct: 609 GGSKLPQKGRIRDEEGVISIEKVLHEDAGLFFCTAHNKLGKAHAQVQLIVVNKPSIKTNF 668

Query: 496 TDKHMDNQA-DLTWTCE-AFGVPDVTYSWFRN 525
            D+   N + ++  TCE +   P+  + W  N
Sbjct: 669 LDEETVNMSCEVELTCENSAECPEALFEWKIN 700



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 120/312 (38%), Gaps = 45/312 (14%)

Query: 499 HMDNQAD-LTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
           H  + AD +   C   G P  T +W++N  E+L+    P      Y +    L +    P
Sbjct: 188 HPRHDADYIALPCTVQGNPKPTVAWYKNDVEVLS----PSMSNVSYLLSGGNLLV----P 239

Query: 557 ERDPAMY---QCRAKNQLKTRYSSAQLRVLTLKPSFKK--RPLESETYAGEGGNVTIFCN 611
                 Y    C A+N L    S   L    LKPSF    RP   + Y+   G   + C+
Sbjct: 240 ASSTLAYSSFHCTARNSLGEVRSPPIL----LKPSFIDPFRPHRLDVYSLATGGAKLDCD 295

Query: 612 -PEAAPKP-KFVW---KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
            P   PK   + W        I+    R+ I  +G L  S V+ +D   Y+C+ +     
Sbjct: 296 APAHQPKSLTYSWLYGSSTDRILSQNERKFISLDGTLFFSYVTAEDEDSYACSLSVYSTQ 355

Query: 667 DESKG---RLIVLHGPSYYEQLPPKITIAAHR----------NLQLRCSAHTEELLDVAY 713
               G   RLI           PPK+     +          ++ L C A+   L    Y
Sbjct: 356 SGHYGPFFRLISSTPKLVNSTFPPKLDSTQPQIFPEDPKVGDSIYLECFAYASPL--PQY 413

Query: 714 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            W+    R+    +      +I+  G +L+I   ++ DAG+Y+CV  +  G  + +  V 
Sbjct: 414 KWS----RVDGKPIPARS--HISNYGRVLKIEKVNYGDAGKYKCVAMNAFGSAAGEVHVK 467

Query: 774 VEGPPGLPGGVQ 785
           +  PP +  G+ 
Sbjct: 468 LRAPPSILQGLH 479


>gi|1532035|emb|CAA63972.1| CHL1-like protein [Mus musculus]
          Length = 1209

 Score =  233 bits (593), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 210/782 (26%), Positives = 327/782 (41%), Gaps = 56/782 (7%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL---SGGNLIINDPRQVEDRG 270
           + C A G P P + W K+D   D         LSD R      SG   I N+      +G
Sbjct: 55  IECEAKGNPEPIFSWTKDDKPFD---------LSDPRIIAANNSGTFKIPNEGHISHFQG 105

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYY 329
            Y C ASN+ G+ +SE ++     + +F  ++   I  +     +  C+PP   P ++ Y
Sbjct: 106 KYRCFASNRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCNPPKGLPPLHIY 165

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPFFPLK 387
           W        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  K+    +  P   L 
Sbjct: 166 WMNIEL-EHIEQDERVYMSQRGDLYFANVEENDSRNDYCCFAAFPKLRTIVQKMPM-KLT 223

Query: 388 VFPHSNFQQLKF-----PNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
           V   ++ +Q K      P        +    GD + LEC A G P P   W++ GS LP 
Sbjct: 224 VNSSNSIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFAEGLPTPHIQWSKPGSELPE 283

Query: 443 N-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
             A  E   + L I N+  +D+G Y C A+N          ++++  P +          
Sbjct: 284 GRATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVEEPPRWKKKPQSAVYS 343

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             +     CEA G P  T  W  NG  +     P +     F+    ++   L P     
Sbjct: 344 TGSSGILLCEAEGEPQPTIKWRLNGLPIEKHPFPGD-----FMFPREISFTNLLPNHT-G 397

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKF 620
           +YQC A N   T  ++A + V+ + P  K +    E YA   G +  + C   A+PK   
Sbjct: 398 VYQCEASNIHGTILANANIDVIDVIPLIKTK--NEENYATVVGYSAFLHCEYFASPKATV 455

Query: 621 VWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
           VW+  D      G R    ENG L I   + +D+G YSC   N  G       L + +  
Sbjct: 456 VWEVADETHPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNA- 514

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINI 737
           +     P    I     L+L C +  +  L   +   W+ +G      ++N  E   I I
Sbjct: 515 TKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEA---FEMNGTEDGRIVI 571

Query: 738 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797
           DG  L I+N +  D G Y C  ++++   S KT V V G  G P      +  K  +   
Sbjct: 572 DGAYLTISNITAEDQGVYSCSAQTSLDSTSKKTQVTVLG-VGDPPETFTCQKDKNRSVRL 630

Query: 798 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWST 855
             +   +    +   I+         F  +    GK  E+ R  G +E  +   L P+  
Sbjct: 631 LREAGDDHNSKSASTIVE--------FEGNREEPGKWEELTRVQG-EETDVVLSLAPYVR 681

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           Y+F+V A NE+G    S PS  + TP   P + P  I     +  ++ I WEPL   +QN
Sbjct: 682 YQFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQN 741

Query: 916 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
            P + YK+ W+ +   E   E +     V    +R+ +   Y  Y+VKVQAIN +G  P+
Sbjct: 742 GPGLEYKVSWKPQGAPEEWEEEI-----VTNHTLRVMTPTVYAPYDVKVQAINQLGSSPD 796

Query: 976 SE 977
            +
Sbjct: 797 PQ 798



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 121/328 (36%), Gaps = 33/328 (10%)

Query: 418 RLECVAFGYPVPSYNWTRRGSPL----PRNAYFENFNRILTIPNVK--VEDQGEYICRAS 471
           ++EC A G P P ++WT+   P     PR     N +    IPN       QG+Y C AS
Sbjct: 54  QIECEAKGNPEPIFSWTKDDKPFDLSDPR-IIAANNSGTFKIPNEGHISHFQGKYRCFAS 112

Query: 472 NDR-SALESSVTISIQAEPNFTIPLTDKHMDNQAD-LTWTCEA-FGVPDVTYSWFRNGEL 528
           N   +A+   +   +   P F     +     + D +   C    G+P +   W  N EL
Sbjct: 113 NRLGTAVSEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCNPPKGLPPLHIYWM-NIEL 171

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA--------------KNQLKTR 574
            + E    +D+  Y  Q   L    +        Y C A              K  + + 
Sbjct: 172 EHIE----QDERVYMSQRGDLYFANVEENDSRNDYCCFAAFPKLRTIVQKMPMKLTVNSS 227

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR 634
            S  Q +   L P  +   L ++T   +G  + + C  E  P P   W K G+ +  G  
Sbjct: 228 NSIKQRKPKLLLPPAQMGSLSAKTVL-KGDTLLLECFAEGLPTPHIQWSKPGSELPEGRA 286

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
                   L I  +S  D G Y CTA N+ G   S    + +  P  +++ P     +  
Sbjct: 287 TIEVHEKTLKIENISYQDRGNYRCTANNLLG-KASHDFHVTVEEPPRWKKKPQSAVYSTG 345

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRI 722
            +  L C A  E    +   W  NG+ I
Sbjct: 346 SSGILLCEAEGEPQPTIK--WRLNGLPI 371


>gi|112293279|ref|NP_032504.3| neural cell adhesion molecule L1 precursor [Mus musculus]
 gi|34785231|gb|AAH56988.1| L1 cell adhesion molecule [Mus musculus]
          Length = 1259

 Score =  232 bits (592), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 216/829 (26%), Positives = 367/829 (44%), Gaps = 77/829 (9%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY-- 233
           I+ PD+  +G + ++ P  V+ + S R ++    +DI+L C A G P   + W K+    
Sbjct: 20  IQIPDEY-KGHHVLEPP--VITEQSPRRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHF 76

Query: 234 -VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-A 291
             ++ L   + +      FT+ G N           +G Y C ASNK G+ +S  +QL A
Sbjct: 77  KPKEELGVVVHEAPYSGSFTIEGNNSFAQ-----RFQGIYRCYASNKLGTAMSHEIQLVA 131

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
            G          P    +     + C+PP +   +  YW      + +++D+RV +  +G
Sbjct: 132 EGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILH-IKQDERVSMGQNG 190

Query: 352 ALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKT 406
            LYF+  L   +  +Y CN     + T        L+V P ++      +L FP N    
Sbjct: 191 DLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSR 250

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
                  G  + LEC+A G+P P+  W     P+P +   ++N N+ L + NV  ED GE
Sbjct: 251 L--VALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFR 524
           Y C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRI 367

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG  ++ ET+  +DQ +Y I+   L +  + P  D  + QC A+NQ     ++A + V+ 
Sbjct: 368 NG--MSMETVN-KDQ-KYRIEQGSLILSNVQPS-DTMVTQCEARNQHGLLLANAYIYVVQ 422

Query: 585 LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN 642
           L      +  +++TY A EG    + C    AP P   W  ++G  +    R   + NG 
Sbjct: 423 LPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGT 480

Query: 643 LLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHR 695
           L I  +  +D+G Y C A N      +    + K    +  GP S  E+   ++T     
Sbjct: 481 LSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFT--- 537

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGE 754
                C A  +  L  +  W  +G      DL E  ++    I+ G L I +  ++D G 
Sbjct: 538 -----CQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGKLVIQSLDYSDQGN 587

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHY 811
           Y CV  + + ++ ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y
Sbjct: 588 YSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKY 647

Query: 812 KIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            I       +   WF++ + V G +          S    L P+  Y F+V A N+ G G
Sbjct: 648 DIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVTAINKYGPG 697

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
           EPS  S    TP   P + P  + G G +  ++ I+W+PL     NAP I Y++ WR + 
Sbjct: 698 EPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQG 757

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               + ET +E   V    + + +   +  YE+KVQA+N+ G GPE +V
Sbjct: 758 ----KQETWREQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQV 801


>gi|410908413|ref|XP_003967685.1| PREDICTED: neuronal cell adhesion molecule-like [Takifugu rubripes]
          Length = 1288

 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 212/829 (25%), Positives = 354/829 (42%), Gaps = 71/829 (8%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +E P  +P+ P    Q P D + D  +     DI + C A G P+PS+ W +     D  
Sbjct: 22  LEVPLDLPQPPTITHQSPKDYIIDPRE-----DIIIHCEAKGKPHPSFSWTRNGTHFD-- 74

Query: 239 VANLIDPLSDKRFTLSGGNLIINDPRQVEDR--GSYHCKASNKFGSIISESVQLAFGFIG 296
               ID   +       G L+++  R   ++    Y C A NK G+ +S ++ +      
Sbjct: 75  ----IDDDPNVTMRPHSGTLVVDISRVKAEQYECVYQCTARNKHGTAVSNNIVVRQSRSP 130

Query: 297 EFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355
            ++ +R  P +  +     + C PP   P    +W  + F   + +  RV  S +G LYF
Sbjct: 131 LWSKERIKPLVVQEGVSLVLPCRPPAGLPPPVIFWMDNNF-QRLPQSSRVSQSLNGDLYF 189

Query: 356 SALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ-LKFPNNFPKTFPEAPKA 413
           S + + D+ N Y C  +   + T +      +KV         +    N    F EAP  
Sbjct: 190 SNVLREDSRNDYICYARFPYTQTIQQKQPITVKVLTMDAINDTMAALYNDTDLFSEAPAE 249

Query: 414 ------------------GDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFENFNRILT 454
                             G  + +EC+A G P P  +WT+    LP +   F ++ + L 
Sbjct: 250 ERKPAFLIPSRPSMTVLRGQVLEMECIAEGLPTPEISWTKVSGDLPAKRTSFLHYQKTLR 309

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF-TIPLTDKHMDNQADLTWTCEAF 513
           I +V   D GEY C A N   +++ ++ + ++A P + + P  +  +        TC A 
Sbjct: 310 IVDVSESDAGEYCCVARNQLGSVQQTIHVMVKAAPYWISGPSKNLVLAPGESGVLTCRAS 369

Query: 514 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573
           G P  + SW  NG  ++ E  P +   +  ++D+ +    +      A+YQC   N    
Sbjct: 370 GTPKPSISWAMNG--ISIENAPADPSRK--VEDDTIIFADVQ-SGSSAVYQCNVSNDYGY 424

Query: 574 RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG 633
             S+A + VL+  P     P        +     I C    +P P+  W K+        
Sbjct: 425 LLSNAFVNVLSEPPRVLT-PANKVYQVIKNQRALIDCASFGSPVPQITWFKESRSSTMDS 483

Query: 634 RRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
           +  I   NG L +      +SG Y+C A N  G+ E+   L V   P+   + P    + 
Sbjct: 484 QAYITHTNGTLEMRTAQAHNSGKYTCVARNSLGIYENHVYLQVKE-PTRILKQPEYKVVQ 542

Query: 693 AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 752
             R++   C    +  L     W  +   + + +   LE+ +       L IT+ S +DA
Sbjct: 543 RGRSVVFECKVKHDPTLTPTITWLKDDGELPDDERLILESDS-------LTITDVSESDA 595

Query: 753 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 812
           G Y CV  +T+ + S    + V   P  P  +++ +  K S  + WT G  +  PI  + 
Sbjct: 596 GVYTCVTNTTLDQDSASAELTVVERPDPPTDLELTDKKKRSVQLTWTPGDEHNSPIQKFL 655

Query: 813 IIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
           +    + +    W N++E V G +   +           L P+  Y F+V+A N++G+  
Sbjct: 656 VQYEDSLHHHGHWHNLTE-VPGTKTTTHLK---------LSPYVHYTFRVLALNDVGFSR 705

Query: 871 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN- 929
           PS PS    T A  P Q P+ + G G +  +L ISW+PL   + N P ++Y++ WR+K+ 
Sbjct: 706 PSFPSRMLKTEAAAPDQNPAGVQGFGTEHDNLVISWKPLSGLQANGPGLHYRVMWRQKDL 765

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           D+E+ S T+    N    V   P+   +  YE+KVQA+ND G GPE  V
Sbjct: 766 DSEWTSVTVA--NNSKFVVSGTPT---FAPYELKVQAVNDYGAGPEPAV 809


>gi|213982987|ref|NP_001135654.1| neuronal cell adhesion molecule precursor [Xenopus (Silurana)
           tropicalis]
 gi|197246560|gb|AAI68554.1| Unknown (protein for MGC:184780) [Xenopus (Silurana) tropicalis]
          Length = 1294

 Score =  232 bits (591), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 225/825 (27%), Positives = 353/825 (42%), Gaps = 71/825 (8%)

Query: 185 KIPRGPYFIK---QPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           ++P  P   K   QP  +     K  I++    I + C A G P PS+ W +     D  
Sbjct: 26  EVPLDPILQKELLQPPTITHQSPKNYIVDPRESIVIQCEAKGKPPPSFSWTRNGTHFD-- 83

Query: 239 VANLIDPLSDKRFTLSGGNLIIN--DPRQVED-RGSYHCKASNKFGSIISESVQLAFGFI 295
               ID         + G L+IN  +  +VE   G Y C A N  GS +S ++ +     
Sbjct: 84  ----IDKDPYVTMKQNSGTLVINTMNGARVEAYEGEYQCTARNDRGSALSNNIVVRQSRS 139

Query: 296 GEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
             +  ++  P +  Q     + C+PP   P    +W  + F     ++KRV    +G LY
Sbjct: 140 PLWTKEKIEPIVIQQGVPLVLPCNPPKGLPPPIIFWMDNSFQKL-PQNKRVSQGLNGDLY 198

Query: 355 FSALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ----LKFPNNFPKTFPE 409
           FS ++  D  + Y C  +  ++ T        LKV  +S   +    + FPNN   T  +
Sbjct: 199 FSNVQPEDTRDFYICYARFNLTQTIHQKQPISLKVLSNSPAGERRPSMLFPNN--TTSNK 256

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G+ + LEC+A G P P  +W +  + LP N  ++ENFN+ L I +V   D G+Y C
Sbjct: 257 TVLLGEVLLLECIAEGLPTPEIHWRKESADLPANRVFYENFNKTLKIIDVTEADAGKYKC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
              N        +T++++A P +  P  +  +    D + TC A G P  + +W  NG  
Sbjct: 317 IGRNILGTTHHIITVTVKAAPYWITPPRNIVLSPGEDGSLTCRASGSPTPSITWLING-- 374

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           ++ E  P  D  R    D ++  +  +     A+YQC A N+     ++A + V+   P 
Sbjct: 375 VSIELAPT-DASRRVDGDTIMFSKVQDGAT--AVYQCNASNKYGYLLANAFVNVIAEPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLIS 646
                +    Y     NV +  C    +PKP+  W K  +     G   +F +NG L I 
Sbjct: 432 IM---MSKHVYKVIANNVALLHCPFFGSPKPEIKWFKGAHGSVLHGNGYVFHDNGTLEIP 488

Query: 647 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
              +D SG Y+C ATN  G  +    L +   P+   + P    I  + +    C    +
Sbjct: 489 VAQKDSSGNYTCVATNSFGSVKDMIGLQI-KDPTMIIKQPEYRVIQRYGSAHFECRVKHD 547

Query: 707 ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
             L    IW  +   + N +          +  G L I N +  D G Y CV  + +  +
Sbjct: 548 PTLKPVVIWLKDDTELPNDE-------RFKVTKGHLTIKNVTEKDEGTYTCVANTDLDTV 600

Query: 767 S----------TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
           S          T T  I    P  P  +++ +  + S  + W  G  N  PIT++ I   
Sbjct: 601 SASAVLTVVEATPTPAIFYDRPDHPFDLELTDHLERSVQLSWVPGDDNNSPITNFIIEYE 660

Query: 817 TNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
              +   TW     H + K     +G +  +  N L P+  Y F+VIA NE G  EPS  
Sbjct: 661 DTMHDPGTW-----HFLTK----VSGTQTTARLN-LSPFVNYSFRVIAVNEFGRSEPSES 710

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEF 933
           S QY T   +P + PS + G G +  +L I+WE +     N P + YK+ WR+K+ D E+
Sbjct: 711 SEQYMTKPAEPDKNPSGVKGVGTEPDNLVIAWESIKGFDSNGPGLQYKVSWRQKDFDDEW 770

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            S  +    NV   +V     F    YE+KVQA+ND+G  P+  V
Sbjct: 771 TSIIV---ANVSKYIVSGTPTF--EPYEIKVQALNDIGYAPDPSV 810



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 149/672 (22%), Positives = 242/672 (36%), Gaps = 86/672 (12%)

Query: 344 RVFV-SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN 402
           RVF  +++  L    + + DAG Y C +   +  T  +     +K  P+     +  P N
Sbjct: 291 RVFYENFNKTLKIIDVTEADAGKYKC-IGRNILGTTHHIITVTVKAAPY----WITPPRN 345

Query: 403 FPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNVK 459
                      G+   L C A G P PS  W   G  +   P +A        +    V+
Sbjct: 346 I------VLSPGEDGSLTCRASGSPTPSITWLINGVSIELAPTDASRRVDGDTIMFSKVQ 399

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM-----DNQADLTWTCEAFG 514
                 Y C ASN    L ++  +++ AEP     +  KH+     +N A L   C  FG
Sbjct: 400 DGATAVYQCNASNKYGYLLANAFVNVIAEPPRI--MMSKHVYKVIANNVALLH--CPFFG 455

Query: 515 VPDVTYSWFR--NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 572
            P     WF+  +G +L+         + Y   DN      +  +     Y C A N   
Sbjct: 456 SPKPEIKWFKGAHGSVLHG--------NGYVFHDNGTLEIPVAQKDSSGNYTCVATNSFG 507

Query: 573 TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIG 630
           +      L++    P+   +  E        G+    C  +  P  KP  +W KD   + 
Sbjct: 508 SVKDMIGLQIK--DPTMIIKQPEYRVIQ-RYGSAHFECRVKHDPTLKPVVIWLKDDTELP 564

Query: 631 SGGRRKIFENGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
           +  R K+ + G+L I  V+  D G Y+C A T++  +  S    +V   P+     P   
Sbjct: 565 NDERFKVTK-GHLTIKNVTEKDEGTYTCVANTDLDTVSASAVLTVVEATPT-----PAIF 618

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPN--------INIDG- 739
                    L  + H E  + ++++    N   I N  +   +T +          + G 
Sbjct: 619 YDRPDHPFDLELTDHLERSVQLSWVPGDDNNSPITNFIIEYEDTMHDPGTWHFLTKVSGT 678

Query: 740 ------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 793
                  L    N SF      E   +S   + S +       P   P GV+ V     +
Sbjct: 679 QTTARLNLSPFVNYSFRVIAVNE-FGRSEPSESSEQYMTKPAEPDKNPSGVKGVGTEPDN 737

Query: 794 ATIQW--TDGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
             I W    G  +  P   YK+  R  +++  W ++    I   V +Y      + E   
Sbjct: 738 LVIAWESIKGFDSNGPGLQYKVSWRQKDFDDEWTSI----IVANVSKYIVSGTPTFE--- 790

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
                YE KV A N++GY    S    Y+   D P  APS +           + W+ +P
Sbjct: 791 ----PYEIKVQALNDIGYAPDPSVVIGYSG-EDLPMTAPSNVELEVINNTLAKVQWDSVP 845

Query: 911 REKQNAPNIYYKIF-WR-----KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 964
                     Y+++ W+     K+N    +   L  +GN    +  +P    YT Y + V
Sbjct: 846 STSIRGHLQGYRVYYWKAENHTKRNKRHMEKRMLTFHGNKTHGM--LPGLEPYTSYILNV 903

Query: 965 QAINDVGPGPES 976
           +  N  G GP S
Sbjct: 904 RVFNGKGEGPPS 915


>gi|53729306|ref|NP_001004493.1| neurofascin isoform 2 precursor [Gallus gallus]
          Length = 1272

 Score =  232 bits (591), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 230/863 (26%), Positives = 370/863 (42%), Gaps = 99/863 (11%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH+L++     +  +D     ++P+ P   KQ   D + D       ++I + C A G P
Sbjct: 19  LHHLIS---AIEVPLDSNIQSELPQPPTITKQSVKDYIVDPR-----DNIFIECEAKGNP 70

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKAS 277
            P++ W +             +   D + ++    G L+I+     R  +  G Y C A 
Sbjct: 71  VPTFSWTRN--------GKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEYQCFAR 122

Query: 278 NKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           N +G+ +S  + L       +  ++   I  ++    ++ C+PP   P    +W      
Sbjct: 123 NDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSSM- 181

Query: 337 NFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVF---PHS 392
             + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + LKV    PH+
Sbjct: 182 EPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 241

Query: 393 -----NFQQLKFPNNFPKTFP-----------EAPKAGDKVRLECVAFGYPVPSYNWTRR 436
                N   +       +T P           +    G  + LEC+A G P P   W ++
Sbjct: 242 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKK 301

Query: 437 GSPLPR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
           G  LP      ENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +    
Sbjct: 302 GGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP 361

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN 555
            +  +    D    C A G P  +  W  NGE +        +  R    D   TI + +
Sbjct: 362 QNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRD 415

Query: 556 PE-RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
            +    A+YQC A N+     ++A + VL + P     P        +     + C    
Sbjct: 416 TQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFG 474

Query: 615 APKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
           +P P   W K+G  N++  GG  K  ENG+L +S   ++D GIY+C ATN+ G  E++ R
Sbjct: 475 SPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVR 533

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNEL 730
           L V   P+   + P    +      +L C    +  L +   W  +   + IGN    E 
Sbjct: 534 LEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE- 591

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG----------- 779
                  D GL  I   +  D G+Y CV  + + K S K  + V   P            
Sbjct: 592 -------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERP 643

Query: 780 -LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVD 836
             P  +++ ++ + S  + W  G  N  PIT Y +    +     TW N S         
Sbjct: 644 DRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS--------- 694

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
           RY G   +++ + L P+  Y+F+VIA N++G   PS PS +Y T   +P   P+ + G G
Sbjct: 695 RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAG 753

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEF 955
            +  ++ I+W PL   +   PN+ Y + WR+++    + +ET+K   +V   V   P   
Sbjct: 754 TQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP--- 807

Query: 956 YYTEYEVKVQAINDVGPGPESEV 978
            Y  YE+KVQA ND G  PE E 
Sbjct: 808 IYVPYEIKVQAENDFGRAPEPET 830


>gi|63660|emb|CAA46330.1| neurofascin [Gallus gallus]
          Length = 1272

 Score =  232 bits (591), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 230/863 (26%), Positives = 370/863 (42%), Gaps = 99/863 (11%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH+L++     +  +D     ++P+ P   KQ   D + D       ++I + C A G P
Sbjct: 19  LHHLIS---AIEVPLDSNIQSELPQPPTITKQSVKDYIVDPR-----DNIFIECEAKGNP 70

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKAS 277
            P++ W +             +   D + ++    G L+I+     R  +  G Y C A 
Sbjct: 71  VPTFSWTRN--------GKFFNVAKDPKVSMRRRSGTLVIDFHGGGRPDDYEGEYQCFAR 122

Query: 278 NKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFP 336
           N +G+ +S  + L       +  ++   I  ++    ++ C+PP   P    +W      
Sbjct: 123 NDYGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSSM- 181

Query: 337 NFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVF---PHS 392
             + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + LKV    PH+
Sbjct: 182 EPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHN 241

Query: 393 -----NFQQLKFPNNFPKTFP-----------EAPKAGDKVRLECVAFGYPVPSYNWTRR 436
                N   +       +T P           +    G  + LEC+A G P P   W ++
Sbjct: 242 ETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKK 301

Query: 437 GSPLPR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
           G  LP      ENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +    
Sbjct: 302 GGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP 361

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN 555
            +  +    D    C A G P  +  W  NGE +        +  R    D   TI + +
Sbjct: 362 QNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRD 415

Query: 556 PE-RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
            +    A+YQC A N+     ++A + VL + P     P        +     + C    
Sbjct: 416 TQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFG 474

Query: 615 APKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
           +P P   W K+G  N++  GG  K  ENG+L +S   ++D GIY+C ATN+ G  E++ R
Sbjct: 475 SPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVR 533

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNEL 730
           L V   P+   + P    +      +L C    +  L +   W  +   + IGN    E 
Sbjct: 534 LEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE- 591

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG----------- 779
                  D GL  I   +  D G+Y CV  + + K S K  + V   P            
Sbjct: 592 -------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERP 643

Query: 780 -LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVD 836
             P  +++ ++ + S  + W  G  N  PIT Y +    +     TW N S         
Sbjct: 644 DRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS--------- 694

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
           RY G   +++ + L P+  Y+F+VIA N++G   PS PS +Y T   +P   P+ + G G
Sbjct: 695 RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAG 753

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEF 955
            +  ++ I+W PL   +   PN+ Y + WR+++    + +ET+K   +V   V   P   
Sbjct: 754 TQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP--- 807

Query: 956 YYTEYEVKVQAINDVGPGPESEV 978
            Y  YE+KVQA ND G  PE E 
Sbjct: 808 IYVPYEIKVQAENDFGRAPEPET 830


>gi|410899487|ref|XP_003963228.1| PREDICTED: neural cell adhesion molecule L1-like [Takifugu
           rubripes]
          Length = 1269

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 216/824 (26%), Positives = 344/824 (41%), Gaps = 91/824 (11%)

Query: 185 KIPRGPYFIKQPTDV-VFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           KIP  P    QP  V VF +       D+ + C A G P+P++ W K+            
Sbjct: 43  KIP--PAITTQPESVTVFSV------EDLVMRCEASGNPSPTFHWTKD--------GEEF 86

Query: 244 DPLSD--KRFTLSGGNLIINDPRQVED-----RGSYHCKASNKFGSIISESVQLAFGFIG 296
           DP SD   + T   G+ +        D     +G Y C ASN+ G+ +S +  L      
Sbjct: 87  DPSSDPEMKVTEEAGSSVFYTLSNTMDTLKQYQGKYICYASNELGTAVSNAAVLMIDAPP 146

Query: 297 -EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355
            +   K+  E        A+ C+PP +      +W  +   +    D RV V  DG LYF
Sbjct: 147 VQQKEKKVTEKAEAGHSIALSCNPPQSSMQPIIHWMDNRLRHIRLSD-RVMVGKDGNLYF 205

Query: 356 SALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKV-----FPHSNFQQLKFPNNFPKTFPE 409
           + L   D+ N Y+CN+Q   + T        L V      P +   Q+  P     T+  
Sbjct: 206 ANLLTEDSRNDYTCNIQYLATRTILAKEPITLTVNPSNLVPRNRRPQMMRPTGSHSTYHA 265

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN-FNRILTIPNVKVEDQGEYIC 468
               G  + LEC+  G P P  +W R+   +  +   ++ F+R L   N+   D GEY C
Sbjct: 266 L--RGQTLELECIVQGLPTPKVSWLRKDGEMSESRISKDMFDRRLQFTNISESDGGEYQC 323

Query: 469 RASNDRSALESSVTISIQAEPNFT-IPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
            A N +     + T++++A P +T  P++  +   +  +   C+A G+P  T +W  NG 
Sbjct: 324 TAENVQGRTFHTYTVTVEASPYWTNAPVSQLYAPGET-VKLDCQADGIPSPTITWTVNGV 382

Query: 528 LLNSETL----PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
            L++ +L     L +     ++D +          D A+YQC+A N+  T  ++  + V+
Sbjct: 383 PLSATSLEPRRSLTESGSLILKDVIFG--------DTAIYQCQASNKHGTILANTNVYVI 434

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGN 642
            L P        + T+  EG    + C    +PKPK  W+    +++ +  R  +  NG 
Sbjct: 435 ELPPQILTENGNTYTFV-EGQKALLECETFGSPKPKVTWESSSISLLLADPRVNLLTNGG 493

Query: 643 LLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
           L I+ VS DD GIY+C    +  +V+   E   R ++L  P      P K  I       
Sbjct: 494 LEIANVSHDDEGIYTCLVQGSNISVNAEVEVLNRTVILSPPQALRLQPGKTAI------- 546

Query: 699 LRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
             C   T+  L    + W  N  +I     ++  T     DG  L I+N    D G Y C
Sbjct: 547 FTCLYVTDPKLSSPLLQWRKNDQKIFESHSDKKYT----FDGPGLIISNVEPGDEGVYTC 602

Query: 758 VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI---- 813
            + + +  +   +T+ +   P  P  +QV        T+ WT G  N  PI  Y +    
Sbjct: 603 QIITKLDMVEASSTLTLCDRPDPPVHLQVTNAKHRVVTLNWTPGDDNNSPILEYVVEFED 662

Query: 814 --IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
             +    W             +E+ R    K+  +   L P+ +Y F+VIA N+ G  +P
Sbjct: 663 QDMKENGW-------------EELKRVAADKK-HVNLPLWPYMSYRFRVIAINDQGKSDP 708

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S  S  Y TPAD P   P  +         L I+WE + +   N P+  Y + WR+   +
Sbjct: 709 SKLSDLYKTPADAPDSNPEDVRSESTDPDTLVITWEEMDKRNFNGPDFKYLVMWRRVVGS 768

Query: 932 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
               +  +EY      +V     F  + +E+KVQA+N  G GPE
Sbjct: 769 --GPDWHEEYTIAPPFIVTDVQNF--SAFEIKVQAVNKKGLGPE 808


>gi|34922043|sp|Q98902.1|L1CAM_TAKRU RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
           Short=NCAM-L1; AltName: Full=L1-CAM; Flags: Precursor
 gi|1495413|emb|CAA96469.1| neural cell adhesion molecule L1 [Takifugu rubripes]
 gi|3098264|gb|AAC15580.1| neural cell adhesion molecule L1 homolog [Takifugu rubripes]
          Length = 1277

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 216/824 (26%), Positives = 344/824 (41%), Gaps = 91/824 (11%)

Query: 185 KIPRGPYFIKQPTDV-VFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           KIP  P    QP  V VF +       D+ + C A G P+P++ W K+            
Sbjct: 48  KIP--PAITTQPESVTVFSV------EDLVMRCEASGNPSPTFHWTKD--------GEEF 91

Query: 244 DPLSD--KRFTLSGGNLIINDPRQVED-----RGSYHCKASNKFGSIISESVQLAFGFIG 296
           DP SD   + T   G+ +        D     +G Y C ASN+ G+ +S +  L      
Sbjct: 92  DPSSDPEMKVTEEAGSSVFYTLSNTMDTLKQYQGKYICYASNELGTAVSNAAVLMIDAPP 151

Query: 297 -EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355
            +   K+  E        A+ C+PP +      +W  +   +    D RV V  DG LYF
Sbjct: 152 VQQKEKKVTEKAEAGHSIALSCNPPQSSMQPIIHWMDNRLRHIRLSD-RVMVGKDGNLYF 210

Query: 356 SALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKV-----FPHSNFQQLKFPNNFPKTFPE 409
           + L   D+ N Y+CN+Q   + T        L V      P +   Q+  P     T+  
Sbjct: 211 ANLLTEDSRNDYTCNIQYLATRTILAKEPITLTVNPSNLVPRNRRPQMMRPTGSHSTYHA 270

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN-FNRILTIPNVKVEDQGEYIC 468
               G  + LEC+  G P P  +W R+   +  +   ++ F+R L   N+   D GEY C
Sbjct: 271 L--RGQTLELECIVQGLPTPKVSWLRKDGEMSESRISKDMFDRRLQFTNISESDGGEYQC 328

Query: 469 RASNDRSALESSVTISIQAEPNFT-IPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
            A N +     + T++++A P +T  P++  +   +  +   C+A G+P  T +W  NG 
Sbjct: 329 TAENVQGRTFHTYTVTVEASPYWTNAPVSQLYAPGET-VKLDCQADGIPSPTITWTVNGV 387

Query: 528 LLNSETL----PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
            L++ +L     L +     ++D +          D A+YQC+A N+  T  ++  + V+
Sbjct: 388 PLSATSLEPRRSLTESGSLILKDVIFG--------DTAIYQCQASNKHGTILANTNVYVI 439

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGN 642
            L P        + T+  EG    + C    +PKPK  W+    +++ +  R  +  NG 
Sbjct: 440 ELPPQILTENGNTYTFV-EGQKALLECETFGSPKPKVTWESSSISLLLADPRVNLLTNGG 498

Query: 643 LLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
           L I+ VS DD GIY+C    +  +V+   E   R ++L  P      P K  I       
Sbjct: 499 LEIANVSHDDEGIYTCLVQGSNISVNAEVEVLNRTVILSPPQALRLQPGKTAI------- 551

Query: 699 LRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
             C   T+  L    + W  N  +I     ++  T     DG  L I+N    D G Y C
Sbjct: 552 FTCLYVTDPKLSSPLLQWRKNDQKIFESHSDKKYT----FDGPGLIISNVEPGDEGVYTC 607

Query: 758 VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI---- 813
            + + +  +   +T+ +   P  P  +QV        T+ WT G  N  PI  Y +    
Sbjct: 608 QIITKLDMVEASSTLTLCDRPDPPVHLQVTNAKHRVVTLNWTPGDDNNSPILEYVVEFED 667

Query: 814 --IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
             +    W             +E+ R    K+  +   L P+ +Y F+VIA N+ G  +P
Sbjct: 668 QDMKENGW-------------EELKRVAADKK-HVNLPLWPYMSYRFRVIAINDQGKSDP 713

Query: 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
           S  S  Y TPAD P   P  +         L I+WE + +   N P+  Y + WR+   +
Sbjct: 714 SKLSDLYKTPADAPDSNPEDVRSESTDPDTLVITWEEMDKRNFNGPDFKYLVMWRRVVGS 773

Query: 932 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
               +  +EY      +V     F  + +E+KVQA+N  G GPE
Sbjct: 774 --GPDWHEEYTIAPPFIVTDVQNF--SAFEIKVQAVNKKGLGPE 813


>gi|38372283|sp|O42414.1|NFASC_CHICK RecName: Full=Neurofascin; Flags: Precursor
 gi|2467122|emb|CAA74726.1| neurofascin [Gallus gallus]
          Length = 1369

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 232/861 (26%), Positives = 369/861 (42%), Gaps = 95/861 (11%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYP 222
           LH+L++     +  +D     ++P+ P   KQ   D + D       ++I + C A G P
Sbjct: 19  LHHLIS---AIEVPLDSNIQSELPQPPTITKQSVKDYIVDPR-----DNIFIECEAKGNP 70

Query: 223 NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNK 279
            P++ W +      +      DP    R     G L+I+     R  +  G Y C A N 
Sbjct: 71  VPTFSWTR----NGKFFNVAKDPKVSMR--RRSGTLVIDFHGGGRPDDYEGEYQCFARND 124

Query: 280 FGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNF 338
           +G+ +S  + L       +  ++   I  ++    ++ C+PP   P    +W        
Sbjct: 125 YGTALSSKIHLQVSRSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPPPVIFWMSSSM-EP 183

Query: 339 VEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVF---PHS-- 392
           + +DKRV    +G LYFS +   DA  +YSCN +   + T +    + LKV    PH+  
Sbjct: 184 IHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHNET 243

Query: 393 ---NFQQLKFPNNFPKTFP-----------EAPKAGDKVRLECVAFGYPVPSYNWTRRGS 438
              N   +       +T P           +    G  + LEC+A G P P   W ++G 
Sbjct: 244 SLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGG 303

Query: 439 PLPR-NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD 497
            LP      ENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +     +
Sbjct: 304 ELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQN 363

Query: 498 KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 557
             +    D    C A G P  +  W  NGE +        +  R    D   TI + + +
Sbjct: 364 LILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQ 417

Query: 558 -RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 616
               A+YQC A N+     ++A + VL + P     P        +     + C    +P
Sbjct: 418 IGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSP 476

Query: 617 KPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
            P   W K+G  N++  GG  K  ENG+L +S   ++D GIY+C ATN+ G  E++ RL 
Sbjct: 477 IPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLE 535

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELET 732
           V   P+   + P    +      +L C    +  L +   W  +   + IGN    E   
Sbjct: 536 V-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--- 591

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG------------L 780
                D GL  I   +  D G+Y CV  + + K S K  + V   P              
Sbjct: 592 -----DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDR 645

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRY 838
           P  +++ ++ + S  + W  G  N  PIT Y +    +     TW N S         RY
Sbjct: 646 PRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RY 696

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
            G   +++ + L P+  Y+F+VIA N++G   PS PS +Y T   +P   P+ + G G +
Sbjct: 697 PGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQ 755

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYY 957
             ++ I+W PL   +   PN+ Y + WR+++    + +ET+K   +V   V   P    Y
Sbjct: 756 KNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IY 809

Query: 958 TEYEVKVQAINDVGPGPESEV 978
             YE+KVQA ND G  PE E 
Sbjct: 810 VPYEIKVQAENDFGRAPEPET 830


>gi|390340332|ref|XP_003725218.1| PREDICTED: neurofascin-like isoform 3 [Strongylocentrotus
           purpuratus]
          Length = 1269

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 220/839 (26%), Positives = 363/839 (43%), Gaps = 90/839 (10%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D +P  P  ++QP  +  D         +TL+C A G P PSY W+K+          L 
Sbjct: 32  DDVP--PSIVEQPESINGDTRLP-----LTLTCRATGIPEPSYYWYKD--------GALF 76

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D  ++ R +L GGNL+I      +D G Y C A+N+ G+ +S+ +  +  F+ +F    A
Sbjct: 77  DVDNNDRASLDGGNLVIESLTTADD-GQYQCFANNRLGTAMSQKIMTSLAFMDQFE-NTA 134

Query: 304 PEIGNQNWGK--AMFCDP----PTNYPGVNYYWARDYF-PNFVEEDKRVFVSYDGALYFS 356
           PE    + G+   + C      P   P    YW      P  +  + R+    +G L FS
Sbjct: 135 PETIQVDQGRPLKLRCGGSPGVPNGNPAPLIYWTDAAAKPTPITYNARINQDPEGNLVFS 194

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK 416
            +   DA  Y C   + V  + +  P   L V   S+   ++   +   T P A +   +
Sbjct: 195 NVIASDAKGYYCQAINNVVGSSQRTPKVTLMV---SDLPPVESGASL-ITKPAANEIAIR 250

Query: 417 V---RLECVAFGYPVPSYNWTRRGSPLPRNA--YFENFNRILTIPNVKVEDQGEYICRAS 471
               +L+C+A+GYP P   W R    L        E   + L I  V+  D+G Y C AS
Sbjct: 251 TQLFKLKCIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQELVISTVENSDKGTYTCVAS 310

Query: 472 NDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
           N     E S  +++++ P F  P +D+       +   C + GVP     W  NG+    
Sbjct: 311 NTGGDDEFSTVVTVESAPYFPAPPSDETKGPGESVDIECRSEGVPAPAVDWLVNGQPWAD 370

Query: 532 ETLPLEDQDRYFIQDN--VLTIRYLNPE-RDPAMYQCRAKNQLKTRYSSAQLRVLTLK-- 586
               ++ +    +  N  + TI   N +  D  ++QC A N+ K   +S  L V+++   
Sbjct: 371 FESNIDTERWTVVTGNPQLATISISNLQTTDSNVFQCIATNKYKEELTSVVLNVVSIPAR 430

Query: 587 -PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLL 644
            PSF   P+  +    E  +    C+ E  P P   W   G+++ +G +  I E  G+++
Sbjct: 431 IPSFT--PVTRKLSVVEDSSAAFTCHVEGRPTPTITWTFKGSVLTNGDKYTIDELAGSIV 488

Query: 645 ISPVSRDDSGIYSCTATN-VHGMD-ESKGR-LIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           I+     DSG Y CTA N + G D E+ G   + + G +     P  +T+        +C
Sbjct: 489 INNALEVDSGAYECTAENSIDGQDYEATGSATLTVLGKTIITLPPADLTVREDTTATFQC 548

Query: 702 S-AHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 759
              +  EL      W  +G R+  N D +             L I NA F+++G Y C V
Sbjct: 549 EITYDHELDKPETYWMKDGQRLEANQDNS-------------LRIDNAMFSNSGTYTCFV 595

Query: 760 KS-------TVGKISTKTTVIVEGPPGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHY 811
           ++       TV  ++    ++V+G PG P  +Q+  +  + +  + W  G  N  PI +Y
Sbjct: 596 ETTLDESTDTVHSVNASAQLVVKGHPGPPQNLQLRAKEQEFAMDLFWEPGNDNNAPIQYY 655

Query: 812 KIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
            I   T W +  W   +      +  RY  RK   ++    P+  Y+F+VIA NE+G  E
Sbjct: 656 IIQYDTKWADMHWQFQANETADDDTSRY--RKVLHLQ----PFVDYQFRVIAVNEIGRSE 709

Query: 871 PSSP-SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
           PS+  +P  +     P + P  + G G +   + I W+ +        + +Y++ +R + 
Sbjct: 710 PSAGVAPTVDPQVAPPSKNPIEVSGSGTRPESMVIRWQSIHPFYYGGDDFHYEVAYRPRM 769

Query: 930 DTE-FQSETL----KEYGNVG-----IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            +E F  +T+     +    G     I   R P    Y EYE  V+++N  GPGPE E+
Sbjct: 770 SSEPFVKDTVYPENTDANPTGIIQNFIVNARKP----YEEYEFSVRSMNSGGPGPEPEI 824



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 23/177 (12%)

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           HY++  R   +S  F V + V  +  D   TG  +  I N   P+  YEF V + N  G 
Sbjct: 760 HYEVAYRPRMSSEPF-VKDTVYPENTDANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGP 818

Query: 869 GEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYY 921
           G    P P+ +   +    P  +PS +        +++++WEP+  E  N      N+YY
Sbjct: 819 G----PEPEIHYGFSGEAAPGASPSGVTVEAISANEVNVTWEPIDPEDANGKLGGYNVYY 874

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            +      D +   ++    GN+  A          T YE+ V+A  + G GP S+V
Sbjct: 875 NVKIASGQDKQMCVKSPCVVGNLQAA----------TTYEITVKAFTNAGEGPASDV 921


>gi|148697923|gb|EDL29870.1| L1 cell adhesion molecule [Mus musculus]
          Length = 1255

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 214/820 (26%), Positives = 355/820 (43%), Gaps = 64/820 (7%)

Query: 180 IENPDKIPRGPYFIKQPTD--VVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY---V 234
           I+ PD++   P   +Q     VVF        +DI+L C A G P   + W K+      
Sbjct: 20  IQIPDELLEPPVITEQSPRRLVVFPT------DDISLKCEARGRPQVEFRWTKDGIHFKP 73

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFG 293
           ++ L   + +      FT+ G N           +G Y C ASNK G+ +S  +QL A G
Sbjct: 74  KEELGVVVHEAPYSGSFTIEGNNSFAQ-----RFQGIYRCYASNKLGTAMSHEIQLVAEG 128

Query: 294 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
                     P    +     + C+PP +   +  YW      + +++D+RV +  +G L
Sbjct: 129 APKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILH-IKQDERVSMGQNGDL 187

Query: 354 YFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFP 408
           YF+  L   +  +Y CN     + T        L+V P ++      +L FP N      
Sbjct: 188 YFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSRL- 246

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYI 467
                G  + LEC+A G+P P+  W     P+P +   ++N N+ L + NV  ED GEY 
Sbjct: 247 -VALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLNVGEEDDGEYT 305

Query: 468 CRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNG 526
           C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  NG
Sbjct: 306 CLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRING 364

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
             ++ ET+  +DQ +Y I+   L +  + P  D  + QC A+NQ     ++A + V+ L 
Sbjct: 365 --MSMETVN-KDQ-KYRIEQGSLILSNVQPS-DTMVTQCEARNQHGLLLANAYIYVVQLP 419

Query: 587 PSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLL 644
                +  +++TY A EG    + C    AP P   W  ++G  +    R   + NG L 
Sbjct: 420 ARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLS 477

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I  +  +D+G Y C A N          L V    +   Q P          +   C A 
Sbjct: 478 IRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPRSAIEKKGARVTFTCQAS 536

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            +  L  +  W  +G      DL E  ++    I+ G L I +  ++D G Y CV  + +
Sbjct: 537 FDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTEL 591

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKII--ARTN 818
            ++ ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I    +  
Sbjct: 592 DEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEM 651

Query: 819 WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878
               WF++ + V G +          S    L P+  Y F+V A N+ G GEPS  S   
Sbjct: 652 APEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSETV 701

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 938
            TP   P + P  + G G +  ++ I+W+PL     NAP I Y++ WR +     + ET 
Sbjct: 702 VTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQG----KQETW 757

Query: 939 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +E   V    + + +   +  YE+KVQA+N+ G GPE +V
Sbjct: 758 REQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQV 796


>gi|390340326|ref|XP_784933.3| PREDICTED: neurofascin-like isoform 4 [Strongylocentrotus
           purpuratus]
 gi|390340328|ref|XP_003725216.1| PREDICTED: neurofascin-like isoform 1 [Strongylocentrotus
           purpuratus]
 gi|390340330|ref|XP_003725217.1| PREDICTED: neurofascin-like isoform 2 [Strongylocentrotus
           purpuratus]
          Length = 1257

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 218/833 (26%), Positives = 360/833 (43%), Gaps = 88/833 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P  ++QP  +  D         +TL+C A G P PSY W+K+          L D  ++ 
Sbjct: 24  PSIVEQPESINGDTRLP-----LTLTCRATGIPEPSYYWYKD--------GALFDVDNND 70

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           R +L GGNL+I      +D G Y C A+N+ G+ +S+ +  +  F+ +F    APE    
Sbjct: 71  RASLDGGNLVIESLTTADD-GQYQCFANNRLGTAMSQKIMTSLAFMDQFE-NTAPETIQV 128

Query: 310 NWGK--AMFCDP----PTNYPGVNYYWARDYF-PNFVEEDKRVFVSYDGALYFSALEQID 362
           + G+   + C      P   P    YW      P  +  + R+    +G L FS +   D
Sbjct: 129 DQGRPLKLRCGGSPGVPNGNPAPLIYWTDAAAKPTPITYNARINQDPEGNLVFSNVIASD 188

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV---RL 419
           A  Y C   + V  + +  P   L V   S+   ++   +   T P A +   +    +L
Sbjct: 189 AKGYYCQAINNVVGSSQRTPKVTLMV---SDLPPVESGASL-ITKPAANEIAIRTQLFKL 244

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNA--YFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           +C+A+GYP P   W R    L        E   + L I  V+  D+G Y C ASN     
Sbjct: 245 KCIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQELVISTVENSDKGTYTCVASNTGGDD 304

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
           E S  +++++ P F  P +D+       +   C + GVP     W  NG+        ++
Sbjct: 305 EFSTVVTVESAPYFPAPPSDETKGPGESVDIECRSEGVPAPAVDWLVNGQPWADFESNID 364

Query: 538 DQDRYFIQDN--VLTIRYLNPE-RDPAMYQCRAKNQLKTRYSSAQLRVLTLK---PSFKK 591
            +    +  N  + TI   N +  D  ++QC A N+ K   +S  L V+++    PSF  
Sbjct: 365 TERWTVVTGNPQLATISISNLQTTDSNVFQCIATNKYKEELTSVVLNVVSIPARIPSFT- 423

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSR 650
            P+  +    E  +    C+ E  P P   W   G+++ +G +  I E  G+++I+    
Sbjct: 424 -PVTRKLSVVEDSSAAFTCHVEGRPTPTITWTFKGSVLTNGDKYTIDELAGSIVINNALE 482

Query: 651 DDSGIYSCTATN-VHGMD-ESKGR-LIVLHGPSYYEQLPPKITIAAHRNLQLRCS-AHTE 706
            DSG Y CTA N + G D E+ G   + + G +     P  +T+        +C   +  
Sbjct: 483 VDSGAYECTAENSIDGQDYEATGSATLTVLGKTIITLPPADLTVREDTTATFQCEITYDH 542

Query: 707 ELLDVAYIWTHNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS---- 761
           EL      W  +G R+  N D +             L I NA F+++G Y C V++    
Sbjct: 543 ELDKPETYWMKDGQRLEANQDNS-------------LRIDNAMFSNSGTYTCFVETTLDE 589

Query: 762 ---TVGKISTKTTVIVEGPPGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHYKIIART 817
              TV  ++    ++V+G PG P  +Q+  +  + +  + W  G  N  PI +Y I   T
Sbjct: 590 STDTVHSVNASAQLVVKGHPGPPQNLQLRAKEQEFAMDLFWEPGNDNNAPIQYYIIQYDT 649

Query: 818 NW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-S 875
            W +  W   +      +  RY  RK   ++    P+  Y+F+VIA NE+G  EPS+  +
Sbjct: 650 KWADMHWQFQANETADDDTSRY--RKVLHLQ----PFVDYQFRVIAVNEIGRSEPSAGVA 703

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQ 934
           P  +     P + P  + G G +   + I W+ +        + +Y++ +R +  +E F 
Sbjct: 704 PTVDPQVAPPSKNPIEVSGSGTRPESMVIRWQSIHPFYYGGDDFHYEVAYRPRMSSEPFV 763

Query: 935 SETL----KEYGNVG-----IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            +T+     +    G     I   R P    Y EYE  V+++N  GPGPE E+
Sbjct: 764 KDTVYPENTDANPTGIIQNFIVNARKP----YEEYEFSVRSMNSGGPGPEPEI 812



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 120/319 (37%), Gaps = 27/319 (8%)

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +++T++    P+        + D +  LT TC A G+P+ +Y W+++G L +     +++
Sbjct: 14  ATLTLAYDVPPSIVEQPESINGDTRLPLTLTCRATGIPEPSYYWYKDGALFD-----VDN 68

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
            DR  +    L I  L    D   YQC A N+L T  S   +  L     F+    E+  
Sbjct: 69  NDRASLDGGNLVIESLTTADD-GQYQCFANNRLGTAMSQKIMTSLAFMDQFENTAPET-I 126

Query: 599 YAGEGGNVTIFCN-----PEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSR 650
              +G  + + C      P   P P   W         I    R      GNL+ S V  
Sbjct: 127 QVDQGRPLKLRCGGSPGVPNGNPAPLIYWTDAAAKPTPITYNARINQDPEGNLVFSNVIA 186

Query: 651 DDSGIYSCTA-TNVHGMDESKGRLIVLHGPSYYEQLPPK------ITIAAHRNLQLRCSA 703
            D+  Y C A  NV G  +   ++ ++        LPP       IT  A   + +R   
Sbjct: 187 SDAKGYYCQAINNVVGSSQRTPKVTLM-----VSDLPPVESGASLITKPAANEIAIRTQL 241

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
              + +   Y       + G   L      +I   G  L I+    +D G Y CV  +T 
Sbjct: 242 FKLKCIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQELVISTVENSDKGTYTCVASNTG 301

Query: 764 GKISTKTTVIVEGPPGLPG 782
           G     T V VE  P  P 
Sbjct: 302 GDDEFSTVVTVESAPYFPA 320



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 23/177 (12%)

Query: 810 HYKIIARTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           HY++  R   +S  F V + V  +  D   TG  +  I N   P+  YEF V + N  G 
Sbjct: 748 HYEVAYRPRMSSEPF-VKDTVYPENTDANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGP 806

Query: 869 GEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYY 921
           G    P P+ +   +    P  +PS +        +++++WEP+  E  N      N+YY
Sbjct: 807 G----PEPEIHYGFSGEAAPGASPSGVTVEAISANEVNVTWEPIDPEDANGKLGGYNVYY 862

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            +      D +   ++    GN+  A          T YE+ V+A  + G GP S+V
Sbjct: 863 NVKIASGQDKQMCVKSPCVVGNLQAA----------TTYEITVKAFTNAGEGPASDV 909


>gi|324505542|gb|ADY42380.1| Contactin [Ascaris suum]
          Length = 548

 Score =  230 bits (587), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/467 (32%), Positives = 228/467 (48%), Gaps = 23/467 (4%)

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG--NQNWGKAMFCDPPTNYP-GV 326
            SYHC A N+ G + S S  +   FI  F+  R           G  + C  P +YP  +
Sbjct: 16  ASYHCTAENQLGVVRSVSAIVRPAFISAFHSSRMDVFAFIAPGRGARIECQAPLHYPKSL 75

Query: 327 NYYWARD-YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           +Y W  D     FV + +R+F+S+DG LYF+   + DA +Y+C++    + +G  GPFF 
Sbjct: 76  SYSWMMDGSTERFVSQTERIFISHDGTLYFAYNVKEDATSYACSLALSSTQSGNYGPFFH 135

Query: 386 LKVFPHSNFQQLKFPNNF----PKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR-RGSPL 440
           LK+ P     +L F        P+ FPE P  G    LEC A+G P PSY WTR  G P+
Sbjct: 136 LKLPP--KLSELTFEPLIDEMQPQIFPEYPLLGHTTYLECFAYGRPSPSYRWTRIDGRPI 193

Query: 441 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
              A   N+ R+L I +++ ED G Y C A N+  A  + VT+ +QA P    PL D+ +
Sbjct: 194 SSKAKATNYGRVLKIDSLEPEDSGTYKCIAENEHGADTAEVTLLVQALPAILWPLQDRIV 253

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
            + A   + C      D    WFR+   ++   +  +D+ R+ I+DN L I  + PE D 
Sbjct: 254 ASNATTVFDCH-LAAADGNIEWFRDAVPISPLLMSSDDRARFLIEDNKLIINRIRPE-DN 311

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 620
            +Y+C A N++ +  SSA+L V+   P F    +    +A  G  +TI C   ++P    
Sbjct: 312 GIYECIANNEIGSTSSSARLTVVDFMPRFDGNAMPKRVFAVVGSELTIPCIYHSSPPGSA 371

Query: 621 VWKK-DGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677
            W + +G  + S GR +   +    L+I PV  DD G Y CTA NV+G  +    ++V+ 
Sbjct: 372 TWSRYNGERLSSNGRIRAGNDRLNALVIHPVQSDDHGEYICTAINVYGEAQFSVYVVVIE 431

Query: 678 GPSYYEQLPPKITIAAHR---NLQLRCSAHTEELLD---VAYIWTHN 718
            P+   Q PP  +++A     N+        E L D     + WT N
Sbjct: 432 KPNVVVQ-PPSESLSAQSGSVNISCEVEMFCENLSDCPEALFEWTVN 477



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 95/419 (22%), Positives = 153/419 (36%), Gaps = 53/419 (12%)

Query: 145 ERVTGMEPLLFICEASIQKLHYLLNDDRT-YQYGMDIENPDKIPRGPYF-IKQP---TDV 199
           ER       +FI         Y + +D T Y   + + +      GP+F +K P   +++
Sbjct: 86  ERFVSQTERIFISHDGTLYFAYNVKEDATSYACSLALSSTQSGNYGPFFHLKLPPKLSEL 145

Query: 200 VFD----------LSKRSILNDIT-LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            F+            +  +L   T L C+A G P+PSY W + D            P+S 
Sbjct: 146 TFEPLIDEMQPQIFPEYPLLGHTTYLECFAYGRPSPSYRWTRIDG----------RPISS 195

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
           K    + G ++  D  + ED G+Y C A N+ G+  +E V L    +          I  
Sbjct: 196 KAKATNYGRVLKIDSLEPEDSGTYKCIAENEHGADTAE-VTLLVQALPAILWPLQDRIVA 254

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPN----FVEEDKRVFVSYDGALYFSALEQIDAG 364
            N      C         N  W RD  P        +D+  F+  D  L  + +   D G
Sbjct: 255 SNATTVFDCH--LAAADGNIEWFRDAVPISPLLMSSDDRARFLIEDNKLIINRIRPEDNG 312

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
            Y C   +++  T  +     +   P  +       N  PK        G ++ + C+  
Sbjct: 313 IYECIANNEIGSTSSSARLTVVDFMPRFD------GNAMPKRVFAV--VGSELTIPCIYH 364

Query: 425 GYPVPSYNWTR-RGSPLPRNAYFENFN---RILTIPNVKVEDQGEYICRASNDRSALESS 480
             P  S  W+R  G  L  N      N     L I  V+ +D GEYIC A N     + S
Sbjct: 365 SSPPGSATWSRYNGERLSSNGRIRAGNDRLNALVIHPVQSDDHGEYICTAINVYGEAQFS 424

Query: 481 VTISIQAEPNFTIPLTDKHMDNQA-------DLTWTCEAFG-VPDVTYSWFRNGELLNS 531
           V + +  +PN  +    + +  Q+       ++   CE     P+  + W  N   + S
Sbjct: 425 VYVVVIEKPNVVVQPPSESLSAQSGSVNISCEVEMFCENLSDCPEALFEWTVNDRPIRS 483



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 53/252 (21%), Positives = 99/252 (39%), Gaps = 23/252 (9%)

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP- 618
           A Y C A+NQL    S + +       +F    ++   +   G    I C  P   PK  
Sbjct: 16  ASYHCTAENQLGVVRSVSAIVRPAFISAFHSSRMDVFAFIAPGRGARIECQAPLHYPKSL 75

Query: 619 KFVWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
            + W  DG+    +    R  I  +G L  +   ++D+  Y+C+         +      
Sbjct: 76  SYSWMMDGSTERFVSQTERIFISHDGTLYFAYNVKEDATSYACSLALSSTQSGN------ 129

Query: 676 LHGPSYYEQLPPKITIAAHRNL----------QLRCSAHTEELLDVAYIWTHNGVRIGNM 725
            +GP ++ +LPPK++      L          +     HT  L   AY       R   +
Sbjct: 130 -YGPFFHLKLPPKLSELTFEPLIDEMQPQIFPEYPLLGHTTYLECFAYGRPSPSYRWTRI 188

Query: 726 DLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
           D   + +     + G +L+I +    D+G Y+C+ ++  G  + + T++V+  P +   +
Sbjct: 189 DGRPISSKAKATNYGRVLKIDSLEPEDSGTYKCIAENEHGADTAEVTLLVQALPAILWPL 248

Query: 785 QVVEVHKTSATI 796
           Q   V   + T+
Sbjct: 249 QDRIVASNATTV 260


>gi|226133|prf||1411301A neural adhesion mol L1
          Length = 1260

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 216/823 (26%), Positives = 362/823 (43%), Gaps = 65/823 (7%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY-- 233
           I+ PD+  +G + ++ P  V+ + S R ++    +DI+L C A G P   + W K+    
Sbjct: 20  IQIPDEY-KGHHVLEPP--VITEQSPRRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHF 76

Query: 234 -VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-A 291
             ++ L   + +      FT+ G N           +G Y C ASNK G+ +S  +QL A
Sbjct: 77  KPKEELGVVVHEAPYSGSFTIEGNNSFAQ-----RFQGIYRCYASNKLGTAMSHEIQLVA 131

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
            G          P    +     + C+PP +   +  YW      + +++D+RV +  +G
Sbjct: 132 EGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKIFD-IKQDERVSMGQNG 190

Query: 352 ALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKT 406
            LYF+  L   +  +Y CN     + T        L+V P ++      +L FP N    
Sbjct: 191 DLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSR 250

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
                  G  + LEC+A G+P P+  W     P+P +   ++N N+ L + NV  ED GE
Sbjct: 251 L--VALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFR 524
           Y C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRI 367

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG  ++ ET+  +DQ +Y I+   L +  + P  D  + QC A+NQ     ++A + V+ 
Sbjct: 368 NG--MSMETVN-KDQ-KYRIEQGSLILSNVQPS-DTMVTQCEARNQHGLLLANAYIYVVQ 422

Query: 585 LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN 642
           L      +  +++TY A EG    + C    AP P   W  ++G  +    R   + NG 
Sbjct: 423 LPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGT 480

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  +  +D+G Y C A N          L V    +   Q P          +   C 
Sbjct: 481 LSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPRSAIEKKGARVTFTCQ 539

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKS 761
           A  +  L  +  W  +G      DL E  ++    I+ G L I +  ++D G Y CV  +
Sbjct: 540 ASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVAST 594

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTN 818
            + ++ ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I     
Sbjct: 595 ELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDK 654

Query: 819 WNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             +   WF++ + V G +          S    L P+  Y F+V A N+ G GEPS  S 
Sbjct: 655 EMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSE 704

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQS 935
              TP   P + P  + G G +  ++ I+W+PL     NAP I Y++ WR +   E ++ 
Sbjct: 705 TVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQGKQETWRK 764

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +T+ +       VV   S F    YE+KVQA+N+ G GPE +V
Sbjct: 765 QTVSD----PFLVVSNTSTF--VPYEIKVQAVNNQGKGPEPQV 801


>gi|348552762|ref|XP_003462196.1| PREDICTED: neural cell adhesion molecule L1-like isoform 3 [Cavia
           porcellus]
          Length = 1247

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 212/827 (25%), Positives = 345/827 (41%), Gaps = 78/827 (9%)

Query: 180 IENPDKIPRGPYFIKQ--PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY---V 234
           IE P ++   P   +Q  P  VVF        +DI+L C A G P   + W K+      
Sbjct: 20  IEIPKELMEPPVITEQSPPRLVVFPT------DDISLKCEARGKPEVQFRWMKDGVHFRP 73

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFG 293
            + L   + +      FT++G N           +G Y C ASN+ G+ +S  +QL A G
Sbjct: 74  SEELGVTVHETPHSGSFTITGNNSFAQ-----RFQGVYRCFASNQLGTAMSHEIQLMAEG 128

Query: 294 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
                     P    +     + C+PP +   +  YW      + +++D+RV +  +G L
Sbjct: 129 APKWPKEMVKPVEVEERESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVSMGQNGNL 187

Query: 354 YFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFP 408
           YF+ +   D+  +Y CN     + T        L+V   +       +L FP N      
Sbjct: 188 YFANVLISDSHSDYICNAHFPGTRTIIQKEPIDLRVKATNTMIDRKPRLLFPTNSSSHL- 246

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQGEYI 467
                G  + LEC+A G+P P+  W     P+P +   ++N N+ L + +V  +D GEY 
Sbjct: 247 -VALQGQPLVLECIAEGFPTPTIKWLLPSGPMPADRITYQNHNKTLQLLSVGEQDDGEYH 305

Query: 468 CRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE 527
           C A N          ++++A P++                  C+A G P    +W  NG 
Sbjct: 306 CLAENSLGTARHVYYVTVEAAPDWLHKPKSGLYGPGETARLDCQAQGRPQPEITWRINGN 365

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
            +      L+   +Y I    L +  + P  D  + QC A+N+     ++A + V+ L  
Sbjct: 366 RMEE----LDKDQKYQIHRGALILSNVQP-GDTMVTQCEARNRHGHLLANAYIYVVQL-- 418

Query: 588 SFKKRPLESETYAGEGGNVT-IFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLI 645
             K   ++++TY G  G    + C    AP P   W  ++G  +    R   + NG L I
Sbjct: 419 PAKILTVDNQTYMGVAGRTAYLLCKAFGAPVPSVQWLDEEGTTVLRDERFFPYANGTLAI 478

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCS 702
             +  +D+G Y C A N    D++   ++    +   +   Q P +            C 
Sbjct: 479 RDLQANDTGRYFCQAAN----DQNNATIVANLQVKEATQITQGPREAIEKKGSRATFTCQ 534

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKS 761
           A  +  L  +  W  +G      DL EL ++    ID G L I N  + D G Y CV  +
Sbjct: 535 ASFDPSLRPSLTWRGDG-----RDLQELGDSDKYFIDDGRLVIDNLEYGDQGNYSCVAST 589

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI----- 813
            + ++  +  ++V G PG    V+V E H    +   + WT    +   I  Y I     
Sbjct: 590 ELDEVEARAQLLVVGSPGPVPHVEVSERHLLKHSQVHLSWTPAEDHNAAIEKYDIEFEDK 649

Query: 814 -IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
            +A   W         H +GK     T     S    L P+  Y F+V A N+ G GEPS
Sbjct: 650 EMAPEKW---------HSLGKVPGNQT-----STTLKLSPYVHYTFRVTAINKYGPGEPS 695

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDT 931
            PS    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +    
Sbjct: 696 PPSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQGTQG 755

Query: 932 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            +Q +T+ +      + + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 756 PWQEQTVSD------SFLVVTNTSTFEPYEIKVQAVNSQGKGPEPQV 796


>gi|20455467|sp|Q05695.3|L1CAM_RAT RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
           Short=NCAM-L1; AltName: Full=Nerve-growth
           factor-inducible large external glycoprotein;
           Short=NILE; AltName: CD_antigen=CD171; Flags: Precursor
          Length = 1259

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 210/822 (25%), Positives = 355/822 (43%), Gaps = 63/822 (7%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY-- 233
           I+ PD+  +G + ++ P  V+ + S R ++    +DI+L C A G P   + W K+    
Sbjct: 20  IQIPDEY-KGHHVLEPP--VITEQSPRRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHF 76

Query: 234 -VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-A 291
             ++ L   + +      FT+ G N           +G Y C ASN  G+ +S  +QL A
Sbjct: 77  KPKEELGVVVHEAPYSGSFTIEGNNSFAQ-----RFQGIYRCYASNNLGTAMSHEIQLVA 131

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
            G          P    +     + C+PP +   +  YW      + +++D+RV +  +G
Sbjct: 132 EGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILH-IKQDERVSMGQNG 190

Query: 352 ALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKT 406
            LYF+  L   +  +Y CN     + T        L+V P ++      +L FP N    
Sbjct: 191 DLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSH 250

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
                  G  + LEC+A G+P P+  W     P+P +   ++N N+ L + NV  ED GE
Sbjct: 251 L--VALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFR 524
           Y C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 367

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG  +      +    +Y I+   L +  + P  D  + QC A+NQ     ++A + V+ 
Sbjct: 368 NGMSIEK----VNKDQKYRIEQGSLILSNVQPS-DTMVTQCEARNQHGLLLANAYIYVVQ 422

Query: 585 LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN 642
           L      +  +++TY A EG    + C    AP P   W  ++G  +    R   + NG+
Sbjct: 423 LPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGH 480

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  +  +D+G Y C A N          L V    +   Q P          +   C 
Sbjct: 481 LGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPRSTIEKKGARVTFTCQ 539

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKS 761
           A  +  L  +  W  +G      DL E  ++    I+ G L I +  ++D G+Y CV  +
Sbjct: 540 ASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGQLVIKSLDYSDQGDYSCVAST 594

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTN 818
            + ++ ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I     
Sbjct: 595 ELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDK 654

Query: 819 WNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             +   WF++ + V G +          S    L P+  Y F+V A N+ G GEPS  S 
Sbjct: 655 EMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSE 704

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 936
              TP   P + P  + G G +  ++ I+W+PL     NAP I Y++ WR       + E
Sbjct: 705 TVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPLG----KQE 760

Query: 937 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           T KE   V    + + +   +  YE+KVQA+N+ G GPE +V
Sbjct: 761 TWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQV 801


>gi|355759126|gb|EHH61574.1| hypothetical protein EGM_19511 [Macaca fascicularis]
          Length = 1226

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 200/753 (26%), Positives = 326/753 (43%), Gaps = 61/753 (8%)

Query: 254 SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAF-GFIGEFNLKRAPEIGNQNWG 312
           SG   I N+      +G Y C ASNK G  +SE ++      + +F  ++   +  +   
Sbjct: 89  SGTFRIPNEGHISHFQGKYRCFASNKLGIAMSEEIEFIVPTGVPKFPKEKIDPLEVEEGD 148

Query: 313 KAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQ 371
             +  C+PP   P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N  C   
Sbjct: 149 PIVLPCNPPKGLPPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFA 207

Query: 372 S--KVSDTGRNGPF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEAPKA- 413
           +  ++    +  P    +    H+N               +Q K     P T   +  + 
Sbjct: 208 AFPRLRTIVQKMPMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSI 267

Query: 414 ----GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYIC 468
               G+ + LEC A G P P  +W + G  LP+     EN+ + L I NV  +D+G Y C
Sbjct: 268 TILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRC 327

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN          + ++  P +T           ++    CEA G P  T  W  NG  
Sbjct: 328 TASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSP 387

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           +++        D  F ++  ++   L P    A+YQC A N   T  +SA + V+ ++P 
Sbjct: 388 IDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILASANVDVVDVRPL 441

Query: 589 FKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLIS 646
            + +  + E YA   G +  + C   A+P+    W+K        GRR  +++NG L I+
Sbjct: 442 IQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQIN 499

Query: 647 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
             + +D+G YSC   N  G       L + +  +     P    I     L+L C +  +
Sbjct: 500 RTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCD 558

Query: 707 ELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 764
             L   +   W+ +G      ++N  E   I IDG  L I+N +  D G Y C   + + 
Sbjct: 559 LHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALD 615

Query: 765 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--ST 822
             +  T V V   P  P  + + E    S  + W  G  +   I+ Y +    N      
Sbjct: 616 SAADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGR 675

Query: 823 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
           W         +E+ R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP 
Sbjct: 676 W---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPP 725

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEY 941
             P + P  I     +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +
Sbjct: 726 AAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH 785

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
                  +R+ +   Y  Y+VKVQAIN +G GP
Sbjct: 786 ------TLRVMTPAVYAPYDVKVQAINQLGSGP 812



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 228/597 (38%), Gaps = 79/597 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 367 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 426

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + +S  + +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 427 ILASANVDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 478

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA--------QLRVL 583
           E  PLE + RY + DN         E D   Y C  +N +     +A        QLRV 
Sbjct: 479 EAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRVS 537

Query: 584 TLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFE 639
              P   K   LE    +         C+       K  W KDG    I G+   R I +
Sbjct: 538 PKNPRIPKLHMLELHCESK--------CDLHLKHSLKLSWSKDGEAFEINGTEDGRIIID 589

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
             NL IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L
Sbjct: 590 GANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRL 647

Query: 700 RCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
              A  +   +++ YI    G +       EL          +L +  A F    ++  +
Sbjct: 648 SWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVI 704

Query: 759 VKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHY 811
             + VG+   ++ +   E PP  P      ++V         I+W          P   Y
Sbjct: 705 AVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 764

Query: 812 KIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELG 867
           ++        TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG
Sbjct: 765 RV--------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLG 809

Query: 868 YGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            G    P+PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I 
Sbjct: 810 SG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQIN 865

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           W K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 866 WWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 922


>gi|354488859|ref|XP_003506583.1| PREDICTED: neural cell adhesion molecule L1-like [Cricetulus
           griseus]
          Length = 1259

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 211/826 (25%), Positives = 354/826 (42%), Gaps = 71/826 (8%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY-- 233
           I+ PD+  +G Y ++ P  V+ + S + ++    +DI+L C A G P   + W K+    
Sbjct: 20  IQIPDEY-KGHYVMEPP--VITEQSPQRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHF 76

Query: 234 -VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-A 291
             ++ L   + +      FT+ G N           +G Y C ASNK G+ +S  +QL A
Sbjct: 77  KPKEELGVVVHEAPYSGSFTIEGNNSFAQ-----RFQGIYRCYASNKLGTAMSHEIQLVA 131

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
            G          P    +     + C+PP +   +  YW      + +++D+RV +  +G
Sbjct: 132 EGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILH-IKQDERVSMGQNG 190

Query: 352 ALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKT 406
            LYF+  L   +  +Y CN     + T        L+V P ++      +L FP N    
Sbjct: 191 DLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSR 250

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
                  G  + LEC+A G+P P+  W     P+P +   ++N N+ L + NV  ED GE
Sbjct: 251 L--VALQGQPLILECIAEGFPTPTIKWLHPSDPMPAHRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFR 524
           Y C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWSI 367

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG  +      +    +Y I+   L +  + P  D  + QC A+NQ     ++A + V+ 
Sbjct: 368 NGMSMEK----VNKDQKYRIEQGSLILSNVQPS-DTMVTQCEARNQHGLLLANAYIYVVQ 422

Query: 585 LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN 642
           L      +  +++TY A EG    + C    AP P   W  ++G  +    R   + NG 
Sbjct: 423 LPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGT 480

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  +  +D+G Y C A N          L V       E     I     R +   C 
Sbjct: 481 LGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITEGPRSAIEKKGAR-VTFTCQ 539

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKS 761
           A  +  L  +  W  +G      DL E  ++    I+ G L I +  ++D G Y CV  +
Sbjct: 540 ASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVAST 594

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVE---VHKTSATIQWTDGATNGRPITHYKI----- 813
            + ++ ++  ++V G PG    +++ +   + ++   + W+    +  PI  Y I     
Sbjct: 595 ELDEVESRAQLLVVGSPGPVSHLELSDRYLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDK 654

Query: 814 -IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
            +A   W S         +GK         + S    L P+  Y F+V A N+ G GEPS
Sbjct: 655 EMAPEKWYS---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPS 700

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
             S    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +    
Sbjct: 701 PVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLWWMDWNAPQVQYRVQWRPQG--- 757

Query: 933 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            + ET KE   V    + + +   +  YE+KVQA+N+ G GPE +V
Sbjct: 758 -KQETWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQV 801


>gi|8393820|ref|NP_059041.1| neural cell adhesion molecule L1 precursor [Rattus norvegicus]
 gi|56741|emb|CAA41860.1| neural cell adhesion molecule L1 [Rattus norvegicus]
          Length = 1255

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 210/822 (25%), Positives = 355/822 (43%), Gaps = 63/822 (7%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY-- 233
           I+ PD+  +G + ++ P  V+ + S R ++    +DI+L C A G P   + W K+    
Sbjct: 20  IQIPDEY-KGHHVLEPP--VITEQSPRRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHF 76

Query: 234 -VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-A 291
             ++ L   + +      FT+ G N           +G Y C ASN  G+ +S  +QL A
Sbjct: 77  KPKEELGVVVHEAPYSGSFTIEGNNSFAQ-----RFQGIYRCYASNNLGTAMSHEIQLVA 131

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
            G          P    +     + C+PP +   +  YW      + +++D+RV +  +G
Sbjct: 132 EGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILH-IKQDERVSMGQNG 190

Query: 352 ALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKT 406
            LYF+  L   +  +Y CN     + T        L+V P ++      +L FP N    
Sbjct: 191 DLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSH 250

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
                  G  + LEC+A G+P P+  W     P+P +   ++N N+ L + NV  ED GE
Sbjct: 251 L--VALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFR 524
           Y C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 367

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG  +      +    +Y I+   L +  + P  D  + QC A+NQ     ++A + V+ 
Sbjct: 368 NGMSIEK----VNKDQKYRIEQGSLILSNVQPS-DTMVTQCEARNQHGLLLANAYIYVVQ 422

Query: 585 LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN 642
           L      +  +++TY A EG    + C    AP P   W  ++G  +    R   + NG+
Sbjct: 423 LPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGH 480

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  +  +D+G Y C A N          L V    +   Q P          +   C 
Sbjct: 481 LGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPRSTIEKKGARVTFTCQ 539

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKS 761
           A  +  L  +  W  +G      DL E  ++    I+ G L I +  ++D G+Y CV  +
Sbjct: 540 ASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGQLVIKSLDYSDQGDYSCVAST 594

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTN 818
            + ++ ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I     
Sbjct: 595 ELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDK 654

Query: 819 WNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             +   WF++ + V G +          S    L P+  Y F+V A N+ G GEPS  S 
Sbjct: 655 EMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSE 704

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 936
              TP   P + P  + G G +  ++ I+W+PL     NAP I Y++ WR       + E
Sbjct: 705 TVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPLG----KQE 760

Query: 937 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           T KE   V    + + +   +  YE+KVQA+N+ G GPE +V
Sbjct: 761 TWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQV 801


>gi|54633206|dbj|BAD66839.1| KIAA0756 splice variant 1 [Homo sapiens]
          Length = 836

 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 182/643 (28%), Positives = 284/643 (44%), Gaps = 50/643 (7%)

Query: 349 YDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407
           ++G LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+  
Sbjct: 1   HNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGT 60

Query: 408 PEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQG 464
             +     G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED G
Sbjct: 61  ASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSG 120

Query: 465 EYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR 524
           EY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  
Sbjct: 121 EYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMV 180

Query: 525 NGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
           NGE L S       +   D    +D  ++ R        A+YQC   N+     ++A + 
Sbjct: 181 NGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLANAFVS 232

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIF 638
           VL + P     P              + C    +P P   W K+G   GS   GG   ++
Sbjct: 233 VLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVY 289

Query: 639 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
           ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +Q
Sbjct: 290 ENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQ 348

Query: 699 LRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
           L C    +  L +   W  +   + IGN    E ++         L I   +  D G Y 
Sbjct: 349 LECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYT 399

Query: 757 CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
           CV  + + +   K  + V G P  P  +++ ++ + S  + W  G  N  PIT Y +   
Sbjct: 400 CVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV--- 456

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+G   PS PS 
Sbjct: 457 -QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSE 511

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 936
           +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++       E
Sbjct: 512 RYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------E 564

Query: 937 TLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
           T + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 565 TREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 607



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 163/681 (23%), Positives = 265/681 (38%), Gaps = 107/681 (15%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 98  DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 150

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 151 --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 206

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 207 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRL--DCPFFG 264

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 265 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 317

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 318 -AENQVRLEVKDPTRIYR-MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 375

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL  P     L  ++T  
Sbjct: 376 NRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL--ELTDL 432

Query: 693 AHRNLQLR---CSAHTEELLDVAY----------IWTHNGVRIGNMDLNELE-TPNINID 738
           A R+++L      A+   + D             +W  +    G+++   L  +P +N  
Sbjct: 433 AERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQ 492

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKTSATIQ 797
             ++ I              V S+   + ++       PP   PG V+     K +  I 
Sbjct: 493 FRVIAINE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 540

Query: 798 WT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           WT  +  +   P   Y +       R  WN+     S +V+G+               V 
Sbjct: 541 WTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQ-------------TPVY 587

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
           VP   YE +V A N+ G G P   S    +  D P  AP+ +         +S+ W  + 
Sbjct: 588 VP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVY 643

Query: 911 REK-QNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
            +  Q     Y   +WR            K+    F  + L+     G+ V R+   F Y
Sbjct: 644 SDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL---FPY 694

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + Y++++  +N  G GP SE 
Sbjct: 695 SNYKLEMVVVNGRGDGPRSET 715



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 151/382 (39%), Gaps = 43/382 (11%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDR 269
           D+ L C A G P P   W+K+            D  SDK +F      L I +  + ED 
Sbjct: 71  DLLLECIASGVPTPDIAWYKKGG----------DLPSDKAKFENFNKALRITNVSE-EDS 119

Query: 270 GSYHCKASNKFGSI---ISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
           G Y C ASNK GSI   IS  V+ A  ++ E  NL  AP    +   +A     PT    
Sbjct: 120 GEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWM 179

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           VN    +   PN   E     V+ D  + F   +      Y CN  ++      N     
Sbjct: 180 VNGEPLQSAPPNPNRE-----VAGD-TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSV 233

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR--RGSPLPRN 443
           L V P    + L   N   +         ++ RL+C  FG P+P+  W +  +GS L   
Sbjct: 234 LDVPP----RMLSPRNQLIRVI-----LYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGG 284

Query: 444 AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
            Y    N  L I  ++ EDQG Y C A+N     E+ V + ++          D+     
Sbjct: 285 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRG 344

Query: 504 ADLTWTCEAFGVPD--VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             +   C     P   +T SW ++ E       PL   +R   +D+ LTI +   ERD  
Sbjct: 345 TTVQLECRVKHDPSLKLTVSWLKDDE-------PLYIGNRMKKEDDSLTI-FGVAERDQG 396

Query: 562 MYQCRAKNQLKTRYSSAQLRVL 583
            Y C A  +L    + A L VL
Sbjct: 397 SYTCVASTELDQDLAKAYLTVL 418


>gi|109018711|ref|XP_001096628.1| PREDICTED: neurofascin isoform 1 [Macaca mulatta]
          Length = 1340

 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 220/833 (26%), Positives = 342/833 (41%), Gaps = 84/833 (10%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 128 EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 183

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 184 FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 241

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 242 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 298

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 299 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 358

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 359 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 418

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 419 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 478

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 479 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 533

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 534 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 590

Query: 646 SPVSRDDSGIYSCTATNVHGMDES--KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
             +    +GI  C A      +       L     P+   ++P          +QL C  
Sbjct: 591 EALR---AGICHCVAAWGCWAENRPVASALGFSTDPTRIYRMPEDQVAKRGTTVQLECRV 647

Query: 704 HTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
             +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  +
Sbjct: 648 KHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVAST 698

Query: 762 TVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
            + +   K  + V               +G P  P  +++ ++ + S  + W  G  N  
Sbjct: 699 ELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNS 758

Query: 807 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
           PIT Y +     +    F      +  +  +Y G   +++   L P+  Y+F+VIA NE+
Sbjct: 759 PITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAVNEV 810

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G   PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR
Sbjct: 811 GSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWR 870

Query: 927 KKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
           ++       ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 871 RR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 916


>gi|348514834|ref|XP_003444945.1| PREDICTED: neural cell adhesion molecule L1-like protein
           [Oreochromis niloticus]
          Length = 1331

 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 202/808 (25%), Positives = 351/808 (43%), Gaps = 63/808 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           P  ++QP  ++   S   I+      IT+ C A G P P Y W K+             P
Sbjct: 104 PLEVEQPPTIITYTSGPIIVLHFDTTITVKCKARGNPPPEYRWEKD--------GQAFVP 155

Query: 246 LSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
            +  RF    + G L++      + +G Y C ASNK G+ ++  +++    I +F  +  
Sbjct: 156 PNFNRFKANHTKGLLVLQSEDMSKFQGKYRCYASNKLGTAMTNEIEIKAFSIPKFPKETL 215

Query: 304 -PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQI 361
            P + ++     + C+PP        YW        +E+D+RV +  DG LYFS A++  
Sbjct: 216 NPIVVSEGEPITLKCNPPEGVAPRLIYWMTVDL-QHIEQDERVSMGTDGNLYFSNAIQND 274

Query: 362 DAGNYSC-----NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK 416
              +Y C      +++ V  T          V P +    L  P+       +    G+ 
Sbjct: 275 SRQDYGCFAAFNRIRTIVQKTAM-AVVVKRSVAPPARIPSLLLPSGVQTE--KVLLKGED 331

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           ++LEC+  G+P PS  W + G  +     F N+N++L++  V+  D+G+Y+C A N    
Sbjct: 332 LQLECIPEGFPTPSVKWIKMGEVMSPRVKFNNYNKLLSLSAVEESDEGKYMCTAENSVGK 391

Query: 477 LESSVTISIQAEPN-FTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                 + ++  P   T P   +     +D+   C   G P    +W RNG +   +   
Sbjct: 392 AVHYFDVIVEEPPKWLTEPPQSQLTVIGSDVHIKCSVSGKPQPAITWRRNGVMFRDDP-- 449

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
               +R  + D+ +T+     E D  +YQC A N+  T  ++  + ++ + P        
Sbjct: 450 ---DNRMQVFDDTVTLLNAKAE-DSGVYQCEASNRHGTILANVNIMIMNMAPLILTE--N 503

Query: 596 SETYA-GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDS 653
           ++ YA   G  +T+ C+  ++P     W KD N I  G R   FE+G +L I    + DS
Sbjct: 504 NQEYAVVVGKEITMNCSVFSSPPSSISWTKDENAI-EGERFLAFESGQSLRIINAEKGDS 562

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVA 712
           G Y+C A+N+ G       L V          PP+ T + + +  +L C    +  L   
Sbjct: 563 GKYTCVASNMEGSSTVTAVLDVKDATKIVS--PPQNTQVDSGKLAKLMCETEYDASLQDT 620

Query: 713 Y--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           +  +W  +   I    L+  +    ++ G +LEI N + +D G Y C  ++++ + S   
Sbjct: 621 FELVWRKDNKEI---PLSSDKHSRYSVKGAMLEIMNVNLSDQGRYTCTARTSLDEDSATA 677

Query: 771 TVIVEGPPGLPGGVQVVEVHK-TSATIQWTDGATNGRPITHYKIIARTN-WN-STWFNVS 827
            + V   P  P  +++ E+    +  + W  G+ +   +T + +    N W    W    
Sbjct: 678 VLTVRDVPDAPIKLELSELDSPRNVVLSWIPGSDHNSTVTEFVVEYEENRWEPGRW---- 733

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
                KE+ R TG  +A+ E  L     Y+F+V A N +G G PS P+ ++ TP   P +
Sbjct: 734 -----KELQRVTG-NQATAELKLYGNLNYQFRVYAVNAIGPGPPSEPTERHKTPPAAPDR 787

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
            P  I   G     + ISWEPL   ++N P   YK+ +R+    +  +E +     V  +
Sbjct: 788 NPENIKIQGHHPHQMEISWEPLSPLERNGPGFEYKVKYRQLGVEDNFTEHM-----VNRS 842

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           V  + +   +  YE+K+ + N  G GPE
Sbjct: 843 VFLVNNTPTFVPYEIKILSRNSYGWGPE 870



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 176/780 (22%), Positives = 295/780 (37%), Gaps = 104/780 (13%)

Query: 248 DKRFTL-SGGNLIINDPRQVEDRGSYHCKAS-NKFGSIISESVQLAFGFIGEFNLKRAPE 305
           D+R ++ + GNL  ++  Q + R  Y C A+ N+  +I+ ++              R P 
Sbjct: 254 DERVSMGTDGNLYFSNAIQNDSRQDYGCFAAFNRIRTIVQKTAMAVVVKRSVAPPARIPS 313

Query: 306 I----GNQNWGKAMFCDP------PTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355
           +    G Q     +  +       P  +P  +  W +      V   +  F +Y+  L  
Sbjct: 314 LLLPSGVQTEKVLLKGEDLQLECIPEGFPTPSVKWIK---MGEVMSPRVKFNNYNKLLSL 370

Query: 356 SALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA-- 413
           SA+E+ D G Y C  ++ V   G+   +F + V               PK   E P++  
Sbjct: 371 SAVEESDEGKYMCTAENSV---GKAVHYFDVIV------------EEPPKWLTEPPQSQL 415

Query: 414 ---GDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNVKVEDQGEYI 467
              G  V ++C   G P P+  W R G      P N   + F+  +T+ N K ED G Y 
Sbjct: 416 TVIGSDVHIKCSVSGKPQPAITWRRNGVMFRDDPDN-RMQVFDDTVTLLNAKAEDSGVYQ 474

Query: 468 CRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA----DLTWTCEAFGVPDVTYSWF 523
           C ASN    + ++V I I         LT+ + +       ++T  C  F  P  + SW 
Sbjct: 475 CEASNRHGTILANVNIMIMNMAPLI--LTENNQEYAVVVGKEITMNCSVFSSPPSSISWT 532

Query: 524 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRV 582
           ++   +  E        R+   ++  ++R +N E+ D   Y C A N      SS    V
Sbjct: 533 KDENAIEGE--------RFLAFESGQSLRIINAEKGDSGKYTCVASNM---EGSSTVTAV 581

Query: 583 LTLKPSFKKRPLESETYAGEGGNVTIFCNPE--AAPKPKF--VWKKDGNII---GSGGRR 635
           L +K + K       T    G    + C  E  A+ +  F  VW+KD   I        R
Sbjct: 582 LDVKDATKIVSPPQNTQVDSGKLAKLMCETEYDASLQDTFELVWRKDNKEIPLSSDKHSR 641

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA--- 692
              +   L I  V+  D G Y+CTA      D +   L V   P      P K+ ++   
Sbjct: 642 YSVKGAMLEIMNVNLSDQGRYTCTARTSLDEDSATAVLTVRDVP----DAPIKLELSELD 697

Query: 693 AHRNLQLR---CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI-TNAS 748
           + RN+ L     S H   + +    +  N    G     EL+    N     L++  N +
Sbjct: 698 SPRNVVLSWIPGSDHNSTVTEFVVEYEENRWEPGRW--KELQRVTGNQATAELKLYGNLN 755

Query: 749 FADAGEYECVVKSTVG-KISTKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWTDGAT 803
           +    ++     + +G    ++ T   + PP  P      +++   H     I W   + 
Sbjct: 756 Y----QFRVYAVNAIGPGPPSEPTERHKTPPAAPDRNPENIKIQGHHPHQMEISWEPLSP 811

Query: 804 NGR--PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
             R  P   YK+  R        N +EH++ + V          + N    +  YE K++
Sbjct: 812 LERNGPGFEYKVKYRQL--GVEDNFTEHMVNRSV---------FLVNNTPTFVPYEIKIL 860

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           + N  G+G    P   Y+   D P  AP  I         L +SW P+P          Y
Sbjct: 861 SRNSYGWGPEPKPVTGYSG-EDVPTAAPRDIAVEVINTTVLRVSWTPVPPATVRGRLGGY 919

Query: 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
            + W ++       + L    ++  +  R    +P    ++EY++ V   N  G GP+S+
Sbjct: 920 NVHWVRRRSLLNPDKILDLSHSMSFSGNRSHVIVPGLEPFSEYKLTVYVFNKKGNGPKSD 979


>gi|432862638|ref|XP_004069954.1| PREDICTED: neuronal cell adhesion molecule-like [Oryzias latipes]
          Length = 1176

 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 212/835 (25%), Positives = 363/835 (43%), Gaps = 77/835 (9%)

Query: 178 MDIENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQD 236
           +D +  + +P+ P    Q P D + D  +     +I + C A G P+PS+ W + D    
Sbjct: 19  LDPKVQEGLPQPPTITSQSPKDHIIDPRE-----NIEIKCEAKGNPDPSFSWTR-DGAHF 72

Query: 237 RLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG 296
           ++  +   P  + R       + I   R     G Y C A NK G  +S+++ +      
Sbjct: 73  KIEEH---PNVNMRPNSGTLEVDITKRRAESFEGVYQCTAENKHGKAVSDNIVVRQSRSP 129

Query: 297 EFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355
            ++ +R  P +  +     + C+PP   P    +W  + F   + +  RV  S +G LYF
Sbjct: 130 LWSKERLKPRVVQEGVSLVLPCEPPAGLPPPLIFWMDNNFQK-LPQSTRVSQSLNGDLYF 188

Query: 356 SALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVF--PHSNFQQLKFPNNFPKTFPEAPK 412
           S + + D+ N Y C  +   + T +      +KV      N     F N+    F EAP 
Sbjct: 189 SNVRREDSRNDYICYARFPGTQTIQQKQPITVKVLNLDSINDTMAAFYNDT-DLFSEAPA 247

Query: 413 --------------------AGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNR 451
                                G K+ +EC+A G P P  +WT+ GS LP     F  FN+
Sbjct: 248 DERMPSFLIPKDRHSSKVVLRGHKLDMECIAEGRPTPEISWTKDGSVLPAGRTSFLQFNK 307

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF-TIPLTDKHMDNQADLTWTC 510
            L I +V   ++G Y C A+N   ++  +  ++++A P + + P ++  +    +   TC
Sbjct: 308 TLQIDDVSDSEEGVYRCTATNKFGSVHHTFHVTVKAAPYWISGPPSNLVLSPGENGMLTC 367

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLE---DQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567
            A G P     W +N        +P+E   + D   ++D+++  R +    + A+YQC  
Sbjct: 368 RASGKPKPLIRWTKN-------VMPIETGLEDDTMKVEDDMIIFRDVK-TSNSAVYQCNV 419

Query: 568 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG- 626
            N+     ++A + VL+  P     P+  +          + C+   +P P   W KD  
Sbjct: 420 SNEFGYLLANAFVNVLSEPPRVLT-PVNKKYEVIRNHRAMLDCSFFGSPIPNITWFKDSR 478

Query: 627 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
           +    G    + +NG L I      DSG Y+C A N+ G+ E+   L V   P+++ + P
Sbjct: 479 SSTLDGDSYALHDNGTLEIRISRPRDSGKYTCVARNILGIFENHVFLEVKE-PTHFLKQP 537

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
               I   R++   C    +  L     W  +   + + D          +    L ITN
Sbjct: 538 EYQVIKRGRSVTFECKVKHDSSLTATMTWLKDDEELPDDD-------RFVVGAESLTITN 590

Query: 747 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
              +DAG Y C++ +T+  +S    + V   P  P  +++ +  K S  + W  G     
Sbjct: 591 VVDSDAGMYTCIMNTTLDHVSASAELTVVERPDPPTDLELTDQTKRSVVLTWIPGNEYNS 650

Query: 807 PITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
            I ++ I    + +    W N++ HV G +   +           L P   Y F+V+A N
Sbjct: 651 HIKNFLIQYEDSLHHRGHWHNLT-HVPGTKTSAHLK---------LSPHVHYTFRVLALN 700

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
           ++G+ +PS+PS  Y T    P + P+ + G G +  +L ISW+PL + + N P ++YK+ 
Sbjct: 701 DVGWSQPSNPSQMYKTDPAAPDENPTGVQGLGTEPNNLIISWKPLTKLQSNGPGLHYKVM 760

Query: 925 WR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +R KK  +E+ +  +    N    VV   S F    YE+KVQA+N+ G GPE  V
Sbjct: 761 YREKKPGSEWITTNV---ANNSRFVVSGTSTF--APYELKVQAVNNYGEGPEPAV 810


>gi|345326812|ref|XP_001505304.2| PREDICTED: neural cell adhesion molecule L1-like protein
           [Ornithorhynchus anatinus]
          Length = 1092

 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 183/696 (26%), Positives = 311/696 (44%), Gaps = 61/696 (8%)

Query: 314 AMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQ- 371
            + C+PP   P ++ YW        + +D+RV++S+ G LYF+ +E+ D+  +Y C    
Sbjct: 88  VLHCNPPKGIPPLHIYWMNIDL-QHIPQDERVYMSHKGDLYFANVEENDSRSDYCCFAAF 146

Query: 372 SKVSDTGRNGPF-FPLKVFPHSNFQQ-----LKFPNNFPKTFPEA---PKA--------- 413
            ++    +  P    +K   H+N        L   N+  +  P+    P           
Sbjct: 147 PRLRTIVQKMPMKLTVKSLKHANDSSSRNATLSKANSIKQRKPKMLLPPDTSGSRSSVTF 206

Query: 414 --GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRA 470
             G  + LEC A G P P   W +    LP++    ENF + L I  V   D+G Y+C A
Sbjct: 207 LNGSTLLLECFAEGLPTPQITWKKLDGNLPKDREAKENFGKTLKIEQVSNTDEGTYLCSA 266

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
           SN   + +    ++++  P +T           ++    CEA G P     W RNG  +N
Sbjct: 267 SNFMGSAKHEFHVTVEEPPRWTQKPKSGVYSIGSNAILRCEASGNPRPEIKWKRNGLPVN 326

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERD-PAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
                L    + F ++    I  +N + D  A+YQC A N+  T  ++A + VL + P  
Sbjct: 327 KN---LVSSGQIFPRE----ISLVNLQLDQSAVYQCEASNKHGTILANANVDVLDIIPVM 379

Query: 590 KKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLISP 647
               L+ E YA   G +  + C   ++P  + +W+++ ++   GG R   +ENG L I  
Sbjct: 380 LT--LDGENYAAVIGYSAFLHCGVFSSPPAEIIWQREDSVTPLGGPRFFKYENGTLEIKQ 437

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
            +++DSG Y+C  TN  G       L  +   +    LP    +     L L+C    + 
Sbjct: 438 TTKEDSGSYNCLVTNSKGKTGVTAYL-AIRDATKLRVLPKNPKVLKSHLLVLQCQIELDS 496

Query: 708 LL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 765
            L   +   WT +G     ++ N  E   I I+   L I+N +  D G Y C+  +++  
Sbjct: 497 HLKHSLKLSWTKDG---NELESNGTEGDRIMIEMNTLSISNVTLEDEGVYSCLASTSLDS 553

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--W 823
           +   + VI+   P  P  + + E    S  + W  G ++   I  + I    N   +  W
Sbjct: 554 VKADSHVIILDVPDSPDNLHLSEKQNRSVRLTWKAGNSHNSIINEFIIEYEGNKEDSEKW 613

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
                    +E+    G  E ++   L P+  Y+F+VIA N +G  +PS PS  + TP  
Sbjct: 614 ---------EELITVPGN-ETTVILSLAPYVKYKFRVIAVNSVGRSQPSKPSEHHETPPA 663

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYG 942
            P + P  I     +  ++ + WEPL   +QN P + Y++ WR++  +T++  ET+K++ 
Sbjct: 664 APDKNPENIRVDASEPNEMIMKWEPLKPMEQNGPGLEYRVSWRRQGVETDWNEETVKKH- 722

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                V+ + +   +  Y++KVQAIN  G GPE +V
Sbjct: 723 -----VLVLKNTPTFAPYDIKVQAINQFGSGPEPQV 753



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 147/679 (21%), Positives = 259/679 (38%), Gaps = 100/679 (14%)

Query: 341 EDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP 400
           +D+    ++   L    +   D G Y C+  +                F  S   +    
Sbjct: 237 KDREAKENFGKTLKIEQVSNTDEGTYLCSASN----------------FMGSAKHEFHVT 280

Query: 401 NNFPKTFPEAPKAG-----DKVRLECVAFGYPVPSYNWTRRGSPLPRN--AYFENFNRIL 453
              P  + + PK+G         L C A G P P   W R G P+ +N  +  + F R +
Sbjct: 281 VEEPPRWTQKPKSGVYSIGSNAILRCEASGNPRPEIKWKRNGLPVNKNLVSSGQIFPREI 340

Query: 454 TIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWT---- 509
           ++ N++++    Y C ASN    + ++  + +       + LT    +  A + ++    
Sbjct: 341 SLVNLQLDQSAVYQCEASNKHGTILANANVDVLD--IIPVMLTLDGENYAAVIGYSAFLH 398

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
           C  F  P     W R   +      PL     +  ++  L I+    E D   Y C   N
Sbjct: 399 CGVFSSPPAEIIWQREDSVT-----PLGGPRFFKYENGTLEIKQTTKE-DSGSYNCLVTN 452

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA----APKPKFVWKKD 625
              ++  +     L ++ + K R L       +   + + C  E         K  W KD
Sbjct: 453 ---SKGKTGVTAYLAIRDATKLRVLPKNPKVLKSHLLVLQCQIELDSHLKHSLKLSWTKD 509

Query: 626 GNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           GN +   G+ G R + E   L IS V+ +D G+YSC A+      ++   +I+L  P   
Sbjct: 510 GNELESNGTEGDRIMIEMNTLSISNVTLEDEGVYSCLASTSLDSVKADSHVIILDVPDS- 568

Query: 683 EQLPPKITIAAHRNLQLRCS---AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 739
              P  + ++  +N  +R +    ++   +   +I  + G +  +    EL T   N   
Sbjct: 569 ---PDNLHLSEKQNRSVRLTWKAGNSHNSIINEFIIEYEGNKEDSEKWEELITVPGNETT 625

Query: 740 GLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSA 794
            +L +  A +    ++  +  ++VG+   +K +   E PP  P      ++V        
Sbjct: 626 VILSL--APYVKY-KFRVIAVNSVGRSQPSKPSEHHETPPAAPDKNPENIRVDASEPNEM 682

Query: 795 TIQW---TDGATNGRPITHYKIIAR-----TNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            ++W        NG P   Y++  R     T+WN     V +HV+              +
Sbjct: 683 IMKWEPLKPMEQNG-PGLEYRVSWRRQGVETDWNEE--TVKKHVL-------------VL 726

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP---ADKPYQAPSRIGGGGGKIGDLS 903
           +N    ++ Y+ KV A N+ G G    P PQ  T     D P  AP  +         ++
Sbjct: 727 KNTPT-FAPYDIKVQAINQFGSG----PEPQVATGYSGEDYPDAAPLNVAVNIINSTLIN 781

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE------YGNVGIAVVRIPSEFYY 957
            +W  +PRE+ +     YKI W K      + +  +E      +G+    +V  P    Y
Sbjct: 782 ATWSKIPRERVHGHLKGYKISWWKTKSLLDERKHRQEKHFLVFWGDRDHGMV--PGLEPY 839

Query: 958 TEYEVKVQAINDVGPGPES 976
           +E+ + V A N  G GPES
Sbjct: 840 SEFHLSVLAFNSKGSGPES 858


>gi|115558|sp|P11627.1|L1CAM_MOUSE RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
           Short=NCAM-L1; AltName: CD_antigen=CD171; Flags:
           Precursor
 gi|53337|emb|CAA31368.1| unnamed protein product [Mus musculus]
          Length = 1260

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 216/823 (26%), Positives = 361/823 (43%), Gaps = 65/823 (7%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY-- 233
           I+ PD+  +G + ++ P  V+ + S R ++    +DI+L C A G P   + W K+    
Sbjct: 20  IQIPDEY-KGHHVLEPP--VITEQSPRRLVVFPTDDISLKCEARGRPQVEFRWTKDGIHF 76

Query: 234 -VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-A 291
             ++ L   + +      FT+ G N           +G Y C ASNK G+ +S  +QL A
Sbjct: 77  KPKEELGVVVHEAPYSGSFTIEGNNSFAQ-----RFQGIYRCYASNKLGTAMSHEIQLVA 131

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
            G          P    +     + C+PP +      YW      + +++D+RV +  +G
Sbjct: 132 EGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPPRIYWMNSKIFD-IKQDERVSMGQNG 190

Query: 352 ALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKT 406
            LYF+  L   +  +Y CN     + T        L+V P ++      +L FP N    
Sbjct: 191 DLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSR 250

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
                  G  + LEC+A G+P P+  W     P+P +   ++N N+ L + NV  ED GE
Sbjct: 251 L--VALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLNVGEEDDGE 308

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFR 524
           Y C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  
Sbjct: 309 YTCLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEITWRI 367

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG  ++ ET+  +DQ +Y I+   L +  + P  D  + QC A+NQ     ++A + V+ 
Sbjct: 368 NG--MSMETVN-KDQ-KYRIEQGSLILSNVQP-TDTMVTQCEARNQHGLLLANAYIYVVQ 422

Query: 585 LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN 642
           L      +  +++TY A EG    + C    AP P   W  ++G  +    R   + NG 
Sbjct: 423 LPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGT 480

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  +  +D+G Y C A N          L V    +   Q P          +   C 
Sbjct: 481 LSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPRSAIEKKGARVTFTCQ 539

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKS 761
           A  +  L  +  W  +G      DL E  ++    I+ G L I +  ++D G Y CV  +
Sbjct: 540 ASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVAST 594

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTN 818
            + ++ ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I     
Sbjct: 595 ELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDK 654

Query: 819 WNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             +   WF++ + V G +          S    L P+  Y F+V A N+ G GEPS  S 
Sbjct: 655 EMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSE 704

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQS 935
              TP   P + P  + G G +  ++ I+W+PL     NAP I Y++ WR +   E ++ 
Sbjct: 705 SVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQGKQETWRK 764

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +T+ +       VV   S F    YE+KVQA+N+ G GPE +V
Sbjct: 765 QTVSD----PFLVVSNTSTF--VPYEIKVQAVNNQGKGPEPQV 801


>gi|196016251|ref|XP_002117979.1| hypothetical protein TRIADDRAFT_33302 [Trichoplax adhaerens]
 gi|190579452|gb|EDV19547.1| hypothetical protein TRIADDRAFT_33302 [Trichoplax adhaerens]
          Length = 601

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 170/573 (29%), Positives = 269/573 (46%), Gaps = 44/573 (7%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQGEYICRASN 472
           G  V L+C+A G+P+P+  W + G PLP   Y F+ + R LTI N++ ED G Y C A N
Sbjct: 1   GGDVILQCIATGFPIPTIQWQKVGGPLPFGRYRFDKWGRQLTITNLRKEDAGNYSCTAMN 60

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
             + +     ++I  +P++ + +TD      +D  W C A G  +V Y W++NG +    
Sbjct: 61  GGTPMTKMAQLTIHIDPSWELRITDTAQPVLSDFMWACRAGG-SNVQYRWYKNGAV---- 115

Query: 533 TLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
              + +  +Y + +N  L IRYL  + D A+Y C A N      +S  L ++  +P F  
Sbjct: 116 ---VPNSGKYNVYNNGSLLIRYLE-QSDKAVYSCLASNSHSNLVTSGWLNIIESQPYFIA 171

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI---IGSGGRRKIFENGNLLISPV 648
           RPL  ET   +G +    C  +  P+PK  + KD N+   + +  +  +  NGNL+I  V
Sbjct: 172 RPLP-ETILFQGSSSVFRCTVDGGPRPKMTYLKD-NVALNLATTNKYTVLLNGNLVIRNV 229

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           ++ D+G+Y C A+N  G  ++ G  +V    + +   P   +        L C+A  +  
Sbjct: 230 NQSDAGVYRCIASNTRGSIDASGTAVV-RDSTVFVTSPTSRSFRRPNPFTLHCNATKDST 288

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS- 767
           LD    WT NG  + N     ++T N+N    +L   N++ AD+G Y C + + V  +  
Sbjct: 289 LDATIYWTINGANVTNPRA-VIQTTNLN---SILTFVNSTLADSGNYACNIATLVPSVGY 344

Query: 768 ---TKTTVI-VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 823
              T+T  I +   P  P  V      K+S  I W  G +N  P+  + I    N  S W
Sbjct: 345 ERRTRTAAITINDIPDPPFNVSSRNKTKSSMYISWLPGNSNNSPLQKFIIRYLVNSVSVW 404

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
            +   +V       Y G +       L PW+TY+  V A N +G    +S S  + T  D
Sbjct: 405 RDADNNVPVSAT--YRGIQ-------LSPWNTYQIVVAAVNGVGISR-NSLSINHVTDTD 454

Query: 884 KPYQ--APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKE 940
            PY+     R  G   +   + I W  L R+ QN P I Y++++R +   T + S +L  
Sbjct: 455 VPYEGLGSVRFFGIANENTAVQIVWVLLSRQHQNGPGIGYRLYYRTQASITGWVSRSL-- 512

Query: 941 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            GN G    R+ +    T YE ++   NDVG G
Sbjct: 513 -GNTG--SFRLSALLPNTRYEFQLVPYNDVGEG 542



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 122/334 (36%), Gaps = 53/334 (15%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRG 270
           D+ L C A G+P P+ +W K   V   L      P    RF   G  L I + R+ ED G
Sbjct: 3   DVILQCIATGFPIPTIQWQK---VGGPL------PFGRYRFDKWGRQLTITNLRK-EDAG 52

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLK----RAPEIGNQNWGKAMFCDPPTNYPGV 326
           +Y C A N  G+ +++  QL       + L+      P + +  W     C    +   V
Sbjct: 53  NYSCTAMNG-GTPMTKMAQLTIHIDPSWELRITDTAQPVLSDFMWA----CRAGGS--NV 105

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTG----- 378
            Y W ++     V    +  V  +G+L    LEQ D   YSC   N  S +  +G     
Sbjct: 106 QYRWYKN--GAVVPNSGKYNVYNNGSLLIRYLEQSDKAVYSCLASNSHSNLVTSGWLNII 163

Query: 379 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS 438
            + P+F  +  P +   Q                 G      C   G P P   + +   
Sbjct: 164 ESQPYFIARPLPETILFQ-----------------GSSSVFRCTVDGGPRPKMTYLKDNV 206

Query: 439 PL---PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
            L     N Y    N  L I NV   D G Y C ASN R ++++S T  ++    F    
Sbjct: 207 ALNLATTNKYTVLLNGNLVIRNVNQSDAGVYRCIASNTRGSIDASGTAVVRDSTVFVTSP 266

Query: 496 TDKHMDNQADLTWTCEAF--GVPDVTYSWFRNGE 527
           T +        T  C A      D T  W  NG 
Sbjct: 267 TSRSFRRPNPFTLHCNATKDSTLDATIYWTINGA 300


>gi|449490686|ref|XP_004174215.1| PREDICTED: LOW QUALITY PROTEIN: neurofascin-like, partial
           [Taeniopygia guttata]
          Length = 1044

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 218/843 (25%), Positives = 356/843 (42%), Gaps = 98/843 (11%)

Query: 185 KIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           ++P+ P   KQ   D + D       ++I + C A G P P++ W +             
Sbjct: 37  ELPQPPTITKQSIKDYIVDPR-----DNIFIECEAKGNPVPTFSWTRN--------GKFF 83

Query: 244 DPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF 298
           +   D + ++    G L+I+     R  +  G Y C A N +G+ +S  + L       +
Sbjct: 84  NVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGEYQCFARNDYGTALSSKIHLQVSKSPLW 143

Query: 299 NLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSA 357
             ++   I  ++    ++ C+PP   P    +W        + +DKRV   ++G LYFS 
Sbjct: 144 PKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFWMSSSM-EPIPQDKRVSQGHNGDLYFSN 202

Query: 358 LEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN--------FPKTFP 408
           +   DA  +YSCN +   + T +    + LKV    +  +    N+          +T P
Sbjct: 203 VLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKTKKSHNETSLGNSPAMYRARGITETTP 262

Query: 409 -----------EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFENFNRILTIP 456
                      +    G  + LEC+A G P P   W ++G  LP      ENFN+ L I 
Sbjct: 263 SFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPVGKTKLENFNKALRIS 322

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P
Sbjct: 323 NVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWMNEPENLILAPGKDGRLVCRANGNP 382

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 575
             +  W  NGE + S      +  R    D   TI + + +    A+YQC A N+     
Sbjct: 383 KPSIQWLVNGEPIESSP---PNPSREVAGD---TIVFRDTQIGSSAVYQCNASNEHGYLL 436

Query: 576 SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NIIGSGG 633
           ++A + VL + P     P        +     + C    +P P   W K+G  N +  GG
Sbjct: 437 ANAFVSVLDVPPRILG-PRNQLIRVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTL-DGG 494

Query: 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 693
             K  ENG+L +    ++D GIY+C ATN+ G  E++ RL V   P+   + P    +  
Sbjct: 495 NYKAHENGSLEMFMARKEDQGIYTCVATNILGKAEAQVRLEV-KDPTRIVRGPEDQVVKR 553

Query: 694 HRNLQLRCSAHTEELLDVAYIWTHNGVRI---GNMDLNELETPNINIDGGLLEITNASFA 750
               +L C    +  L +   W  +   +     M   E        DG  L I   +  
Sbjct: 554 GTMPRLHCRVKHDPTLRLMVTWLKDDAPLYLGSRMKKEE--------DG--LTIYGVTEK 603

Query: 751 DAGEYECVVKSTVGKISTKTTVIVEGPPG------------LPGGVQVVEVHKTSATIQW 798
           D G+Y CV  + + K   K  + V   P              P  +++ ++ + S  + W
Sbjct: 604 DQGDYTCVASTELDKDLAKAYLTVLAIPANRLRDLPKERPDRPRDLELTDLAERSVRLTW 663

Query: 799 TDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
             G  N  PIT Y +    +      W N S         RY G   +++ + L P+  Y
Sbjct: 664 IPGDDNNSPITDYIVQFEEDRFQPGMWHNHS---------RYPGSVNSAVLS-LSPYVNY 713

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           +F+VIA N++G   PS PS +Y T   +P   P+ + G G +  ++ I+W PL   +   
Sbjct: 714 QFRVIAVNDVGSSVPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYG 773

Query: 917 PNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           PN+ Y + WR+++    + +ET++   +V   V   P    Y  YE+KVQA ND G  PE
Sbjct: 774 PNLRYIVRWRRRDPRGSWYNETVRGARHV---VWNTP---IYVPYEIKVQAENDFGRAPE 827

Query: 976 SEV 978
            + 
Sbjct: 828 PDT 830


>gi|211279|gb|AAA48632.1| cell adhesion molecule, partial [Gallus gallus]
          Length = 1260

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 222/820 (27%), Positives = 351/820 (42%), Gaps = 78/820 (9%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP  +     K  I++   +I + C A G P PS+ W +     D      ID  +  
Sbjct: 13  LSQPPTITQQSPKDYIVDPRENIVIQCEAKGKPPPSFSWTRNGTHFD------IDKDAQV 66

Query: 250 RFTLSGGNLIINDPRQVEDR---GSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APE 305
               + G L++N    V+     G Y C A N+ G+ IS ++ +       +  ++  P 
Sbjct: 67  TMKPNSGTLVVNIMNGVKAEAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPN 126

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-G 364
              +     + C PP   P    +W  + F   + + +RV    +G LYFS ++  D   
Sbjct: 127 HVREGDSLVLNCRPPVGLPPPIIFWMDNAF-QRLPQSERVSQGLNGDLYFSNVQPEDTRE 185

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ----LKFPNNFPKTFPEAPKAGDKVRLE 420
           +Y C  +   + T +      +KVF      +    L  P     T  +    G+ + LE
Sbjct: 186 DYICYARFNHTQTIQQKQPISVKVFSTKPVTERPPVLLTP--MGSTSNKVELRGNVLLLE 243

Query: 421 CVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           C+A G P P   W + G  LP N  +FENF + L I +V   D G Y C A N   +   
Sbjct: 244 CIAAGLPTPVIRWIKEGGELPANRTFFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHH 303

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
            ++++++A P +     +  +    D T  C A G P  + SW  NG  +    +  ED 
Sbjct: 304 VISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTNGVPI---AIAPEDP 360

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT-----LKPSFKKRPL 594
            R    D +  I     ER  A+YQC A N+     ++A + VL      L P+ K   +
Sbjct: 361 SRKVDGDTI--IFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQV 418

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDD 652
            +++ A       I C    +PKP+  W +   G+I+  G      +NG L I    +D 
Sbjct: 419 IADSPA------LIDCAYFGSPKPEIEWFRGVKGSIL-RGNEYVFHDNGTLEIPVAQKDS 471

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G  +++ +L V   P+   + P    I         C    +  L   
Sbjct: 472 TGTYTCVARNKLGKTQNEVQLEV-KDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPT 530

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
            IW  +     N +L + E   +  D   L I N +  D G Y C+V +T+  +S    +
Sbjct: 531 VIWLKD-----NNELPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVL 583

Query: 773 IVEGPPGLPG----------GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-- 820
            V   P  P            +++    + S  + W  G  N  PIT++ I      +  
Sbjct: 584 TVVAAPPTPAIIYARPNPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEP 643

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             W   +E V G +          +++  L P+  Y F+VIA NE+G  +PS PS QY T
Sbjct: 644 GVWHYQTE-VPGSQ---------TTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLT 693

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 939
            +  P + PS + G G +  +L I+WE L   + N P + YK+ WR+K+ D E+ S  + 
Sbjct: 694 KSANPDENPSNVQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVVV- 752

Query: 940 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE-SEV 978
              NV   +V     F    YE+KVQA+ND+G  PE SEV
Sbjct: 753 --ANVSKYIVSGTPTF--VPYEIKVQALNDLGYAPEPSEV 788


>gi|462740|sp|P35331.1|NRCAM_CHICK RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
           AltName: Full=Neuronal surface protein Bravo;
           Short=gBravo; AltName: Full=NgCAM-related cell adhesion
           molecule; Short=Ng-CAM-related; Flags: Precursor
          Length = 1284

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 222/820 (27%), Positives = 350/820 (42%), Gaps = 78/820 (9%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP  +     K  I++   +I + C A G P PS+ W +     D      ID  +  
Sbjct: 37  LSQPPTITQQSPKDYIVDPRENIVIQCEAKGKPPPSFSWTRNGTHFD------IDKDAQV 90

Query: 250 RFTLSGGNLIINDPRQVEDR---GSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APE 305
               + G L++N    V+     G Y C A N+ G+ IS ++ +       +  ++  P 
Sbjct: 91  TMKPNSGTLVVNIMNGVKAEAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPN 150

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG- 364
              +     + C PP   P    +W  + F   + + +RV    +G LYFS ++  D   
Sbjct: 151 HVREGDSLVLNCRPPVGLPPPIIFWMDNAF-QRLPQSERVSQGLNGDLYFSNVQPEDTRV 209

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ----LKFPNNFPKTFPEAPKAGDKVRLE 420
           +Y C  +   + T +      +KVF      +    L  P     T  +    G+ + LE
Sbjct: 210 DYICYARFNHTQTIQQKQPISVKVFSTKPVTERPPVLLTP--MGSTSNKVELRGNVLLLE 267

Query: 421 CVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           C+A G P P   W + G  LP N  +FENF + L I +V   D G Y C A N   +   
Sbjct: 268 CIAAGLPTPVIRWIKEGGELPANRTFFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHH 327

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
            ++++++A P +     +  +    D T  C A G P  + SW  NG  +    +  ED 
Sbjct: 328 VISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTNGVPI---AIAPEDP 384

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT-----LKPSFKKRPL 594
            R    D +  I     ER  A+YQC A N+     ++A + VL      L P+ K   +
Sbjct: 385 SRKVDGDTI--IFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQV 442

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDD 652
            +++ A       I C    +PKP+  W +   G+I+  G      +NG L I    +D 
Sbjct: 443 IADSPA------LIDCAYFGSPKPEIEWFRGVKGSIL-RGNEYVFHDNGTLEIPVAQKDS 495

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G  +++ +L V   P+   + P    I         C    +  L   
Sbjct: 496 TGTYTCVARNKLGKTQNEVQLEV-KDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPT 554

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
            IW  +     N +L + E   +  D   L I N +  D G Y C+V +T+  +S    +
Sbjct: 555 VIWLKD-----NNELPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVL 607

Query: 773 IVEGPPGLPG----------GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-- 820
            V   P  P            +++    + S  + W  G  N  PIT++ I      +  
Sbjct: 608 TVVAAPPTPAIIYARPNPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEP 667

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             W   +E V G            +++  L P+  Y F+VIA NE+G  +PS PS QY T
Sbjct: 668 GVWHYQTE-VPGSH---------TTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLT 717

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 939
            +  P + PS + G G +  +L I+WE L   + N P + YK+ WR+K+ D E+ S  + 
Sbjct: 718 KSANPDENPSNVQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVVV- 776

Query: 940 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE-SEV 978
              NV   +V     F    YE+KVQA+ND+G  PE SEV
Sbjct: 777 --ANVSKYIVSGTPTF--VPYEIKVQALNDLGYAPEPSEV 812


>gi|45383994|ref|NP_990597.1| neuronal cell adhesion molecule precursor [Gallus gallus]
 gi|63707|emb|CAA41391.1| Nr-CAM protein [Gallus gallus]
          Length = 1268

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 222/820 (27%), Positives = 350/820 (42%), Gaps = 78/820 (9%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP  +     K  I++   +I + C A G P PS+ W +     D      ID  +  
Sbjct: 37  LSQPPTITQQSPKDYIVDPRENIVIQCEAKGKPPPSFSWTRNGTHFD------IDKDAQV 90

Query: 250 RFTLSGGNLIINDPRQVEDR---GSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APE 305
               + G L++N    V+     G Y C A N+ G+ IS ++ +       +  ++  P 
Sbjct: 91  TMKPNSGTLVVNIMNGVKAEAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPN 150

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG- 364
              +     + C PP   P    +W  + F   + + +RV    +G LYFS ++  D   
Sbjct: 151 HVREGDSLVLNCRPPVGLPPPIIFWMDNAF-QRLPQSERVSQGLNGDLYFSNVQPEDTRV 209

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ----LKFPNNFPKTFPEAPKAGDKVRLE 420
           +Y C  +   + T +      +KVF      +    L  P     T  +    G+ + LE
Sbjct: 210 DYICYARFNHTQTIQQKQPISVKVFSTKPVTERPPVLLTP--MGSTSNKVELRGNVLLLE 267

Query: 421 CVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           C+A G P P   W + G  LP N  +FENF + L I +V   D G Y C A N   +   
Sbjct: 268 CIAAGLPTPVIRWIKEGGELPANRTFFENFKKTLKIIDVSEADSGNYKCTARNTLGSTHH 327

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
            ++++++A P +     +  +    D T  C A G P  + SW  NG  +    +  ED 
Sbjct: 328 VISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTNGVPI---AIAPEDP 384

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT-----LKPSFKKRPL 594
            R    D +  I     ER  A+YQC A N+     ++A + VL      L P+ K   +
Sbjct: 385 SRKVDGDTI--IFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQV 442

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDD 652
            +++ A       I C    +PKP+  W +   G+I+  G      +NG L I    +D 
Sbjct: 443 IADSPA------LIDCAYFGSPKPEIEWFRGVKGSIL-RGNEYVFHDNGTLEIPVAQKDS 495

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G  +++ +L V   P+   + P    I         C    +  L   
Sbjct: 496 TGTYTCVARNKLGKTQNEVQLEV-KDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPT 554

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
            IW  +     N +L + E   +  D   L I N +  D G Y C+V +T+  +S    +
Sbjct: 555 VIWLKD-----NNELPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVL 607

Query: 773 IVEGPPGLPG----------GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-- 820
            V   P  P            +++    + S  + W  G  N  PIT++ I      +  
Sbjct: 608 TVVAAPPTPAIIYARPNPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEP 667

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             W   +E V G            +++  L P+  Y F+VIA NE+G  +PS PS QY T
Sbjct: 668 GVWHYQTE-VPGSH---------TTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLT 717

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 939
            +  P + PS + G G +  +L I+WE L   + N P + YK+ WR+K+ D E+ S  + 
Sbjct: 718 KSANPDENPSNVQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVVV- 776

Query: 940 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE-SEV 978
              NV   +V     F    YE+KVQA+ND+G  PE SEV
Sbjct: 777 --ANVSKYIVSGTPTF--VPYEIKVQALNDLGYAPEPSEV 812


>gi|284004976|ref|NP_001164836.1| neural cell adhesion molecule L1 precursor [Oryctolagus cuniculus]
 gi|217418262|gb|ACK44266.1| L1 cell adhesion molecule isoform 2 precursor (predicted)
           [Oryctolagus cuniculus]
          Length = 1247

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 214/826 (25%), Positives = 364/826 (44%), Gaps = 86/826 (10%)

Query: 192 FIKQPTD-----VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLV 239
           FI+ P +     V+ + S R ++    +DI+L C A G P   + W ++      ++ L 
Sbjct: 19  FIQIPEELLEPPVITEQSPRRLVVFPTDDISLKCEASGRPQVQFRWTRDGIHFKPEEELG 78

Query: 240 ANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
             +        FT++G N   N P++ +  G Y C ASNK G+ +S  +QL      ++ 
Sbjct: 79  VTVYQAPHSGSFTITGNN--SNFPQRFQ--GIYRCFASNKLGTAMSHEIQLMAEGAPKWP 134

Query: 300 LKRA-PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-A 357
            +R  P    +     + C+PP +   +  YW      + +++D+RV +  +G LYF+  
Sbjct: 135 KERVKPVEVEEGESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANV 193

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKA 413
           L   +  +Y CN     + T        L+V   ++      +L  P N           
Sbjct: 194 LTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLSPTNSSSHL--VALQ 251

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASN 472
           G  + LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N
Sbjct: 252 GQPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAEN 311

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLNS 531
              +   +  I+++A P + +     H+    + +   C+  G P    +W  NG  +  
Sbjct: 312 SLGSARHAYYITVEAAP-YWLHKPQSHLYGPGETVRLDCQVQGRPQPEVTWRING--IPV 368

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
           + LP +DQ +Y IQ   L +    P  D  + QC A+N+     ++A + V+ L      
Sbjct: 369 DELP-KDQ-KYRIQHGALILSNAQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPARILT 425

Query: 592 RPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVS 649
              +++TY A EG    + C    AP P   W  ++G  +    R   + NG L I  + 
Sbjct: 426 G--DNQTYMAVEGSTAHLLCKAFGAPVPTVQWLDEEGTTVLQDERFFPYANGTLGIRDLQ 483

Query: 650 RDDSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCS 702
            +D+G Y C A N      +    + K    +  GP S  E+   ++T          C 
Sbjct: 484 ANDTGRYFCQAANDQNNVTIMANLQVKEATQITQGPRSAIEKKGARVTFT--------CQ 535

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKS 761
           A  +  L  +  W  +G      DL+EL ++    ++ G L I +  ++D G Y CV  +
Sbjct: 536 ASFDPSLQPSITWRGDG-----RDLHELGDSDKYFLEAGRLVIHSLDYSDQGNYSCVAST 590

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI----- 813
            + ++ ++  ++V G PG    ++V + H   ++   + W+    +  PI  Y I     
Sbjct: 591 ELDEVESRAQLLVVGSPGPVPQLEVSDHHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDK 650

Query: 814 -IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
            +A   W S         +GK     T    A+++  L P+  Y F+V A N+ G GEPS
Sbjct: 651 EMAPEKWYS---------LGKVPGNQT---SATLK--LSPYVHYTFRVTAINKYGPGEPS 696

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
             S    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR      
Sbjct: 697 PASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPVGTQG 756

Query: 933 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              E +     V   ++ + +   +  YE+KVQA+N  G GPE +V
Sbjct: 757 PWQEQI-----VSDPILVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 797


>gi|326911404|ref|XP_003202049.1| PREDICTED: neuronal cell adhesion molecule-like [Meleagris gallopavo]
          Length = 1326

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 233/880 (26%), Positives = 362/880 (41%), Gaps = 95/880 (10%)

Query: 150  MEPLLFICEASIQK-----LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQ-PTDVVFDL 203
            +EP + + + SI       + +L          +D +  +++ + P   +Q P D + D 
Sbjct: 217  VEPKIMMKKKSISASKASLIFFLCQMISALDVPLDSKLLEELSQPPTITQQSPKDYIVDP 276

Query: 204  SKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP 263
             +     +I + C A G P PS+ W +     D      ID  +      + G L++N  
Sbjct: 277  RE-----NIVIQCEAKGKPPPSFSWTRNGTHFD------IDKDAQVTMKPNSGTLVVNIM 325

Query: 264  RQVED---RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CD 318
              V+     G Y C A N+ G+ IS ++ +          K   E  +   G ++   C 
Sbjct: 326  NGVKAEAYEGVYQCTARNERGAAISNNIVIRPSR-SPLWTKEKLEPNHVREGDSLVLNCR 384

Query: 319  PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDT 377
            PP   P    +W  + F   + + +RV    +G LYFS ++  D   +Y C  +   + T
Sbjct: 385  PPVGLPPPIIFWMDNAF-QRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQT 443

Query: 378  GRNGPFFPLKVFPHSNFQQLKFPNNF------PKTFPEAPKA---------------GDK 416
             +      +KVF   +       N         K   E P                 G+ 
Sbjct: 444  IQQKQPISVKVFSMDSLNDTIAANLSDTDIYGAKPVTERPPVLLTPTGSTSNKVELRGNV 503

Query: 417  VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
            + LEC+A G P P   W + G  LP N  +FENF + L I +V   D G Y C A N   
Sbjct: 504  LLLECIAAGLPTPVIRWIKEGGELPANRTFFENFKKTLKIIDVSEADSGNYKCIARNILG 563

Query: 476  ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
            +    ++++++A P +     +  +    D T  C A G P  + SW  NG  +    + 
Sbjct: 564  STHHVISVTVKASPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLTNGVPI---AIA 620

Query: 536  LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
             ED  R    D +  I     ER  A+YQC A N+     ++A + VL   P     P  
Sbjct: 621  PEDPSRRVDGDTI--IFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PAN 677

Query: 596  SETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDS 653
                   G    I C    +PKP+  W K   G+I+  G      +NG L I    +D +
Sbjct: 678  KLYQVIAGSPALIDCAYFGSPKPEIEWFKGVKGSIL-RGNEYVFHDNGTLEIPVAQKDST 736

Query: 654  GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
            G Y+C A N  G  +++ +L V   P+   + P    I     +   C    +  L    
Sbjct: 737  GTYTCVARNKLGKTQNEVQLEV-KDPTMIIKQPEYKVIQRSAQVSFECVIKHDPTLIPTV 795

Query: 714  IWTHNGVRIGNMDLNELETPNINIDGGL-LEITNASFADAGEYECVVKSTVGKISTKTTV 772
            IW          D NEL      + G   L I N +  D G Y C+V +T+  +S    +
Sbjct: 796  IWLK--------DNNELPDDERFLVGKENLTIMNVTDKDDGTYTCIVNTTLDSVSASAVL 847

Query: 773  IVEGPPGLPG----------GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-- 820
             V   P  P            +++    + S  + W  G  N  PIT++ I      +  
Sbjct: 848  TVVAAPPTPAIIYARPNPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEP 907

Query: 821  STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
              W   +E V G          + +++  L P+  Y F+VIA NE+G  +PS PS QY T
Sbjct: 908  GVWHYQTE-VPG---------SQTTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLT 957

Query: 881  PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 939
             +  P + PS + G G +  +L I+WE L   + N P + YK+ WR+K+ D E+ S  + 
Sbjct: 958  KSANPDENPSNVQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVVV- 1016

Query: 940  EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE-SEV 978
               NV   +V     F    YE+KVQA+ND+G  PE SEV
Sbjct: 1017 --ANVSKYIVSGTPTF--VPYEIKVQALNDLGYAPEPSEV 1052


>gi|348552758|ref|XP_003462194.1| PREDICTED: neural cell adhesion molecule L1-like isoform 1 [Cavia
           porcellus]
          Length = 1256

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 203/795 (25%), Positives = 333/795 (41%), Gaps = 70/795 (8%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           +DI+L C A G P   + W K+       + L   + +      FT++G N         
Sbjct: 51  DDISLKCEARGKPEVQFRWMKDGVHFRPSEELGVTVHETPHSGSFTITGNNSFAQ----- 105

Query: 267 EDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
             +G Y C ASN+ G+ +S  +QL A G          P    +     + C+PP +   
Sbjct: 106 RFQGVYRCFASNQLGTAMSHEIQLMAEGAPKWPKEMVKPVEVEERESVVLPCNPPPSAEP 165

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFF 384
           +  YW      + +++D+RV +  +G LYF+ +   D+  +Y CN     + T       
Sbjct: 166 LRIYWMNSKILH-IKQDERVSMGQNGNLYFANVLISDSHSDYICNAHFPGTRTIIQKEPI 224

Query: 385 PLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
            L+V   +       +L FP N           G  + LEC+A G+P P+  W     P+
Sbjct: 225 DLRVKATNTMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEGFPTPTIKWLLPSGPM 282

Query: 441 PRNAY-FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 499
           P +   ++N N+ L + +V  +D GEY C A N          ++++A P++        
Sbjct: 283 PADRITYQNHNKTLQLLSVGEQDDGEYHCLAENSLGTARHVYYVTVEAAPDWLHKPKSGL 342

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
                     C+A G P    +W  NG  +      L+   +Y I    L +  + P  D
Sbjct: 343 YGPGETARLDCQAQGRPQPEITWRINGNRMEE----LDKDQKYQIHRGALILSNVQP-GD 397

Query: 560 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT-IFCNPEAAPKP 618
             + QC A+N+     ++A + V+ L    K   ++++TY G  G    + C    AP P
Sbjct: 398 TMVTQCEARNRHGHLLANAYIYVVQL--PAKILTVDNQTYMGVAGRTAYLLCKAFGAPVP 455

Query: 619 KFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV-- 675
              W  ++G  +    R   + NG L I  +  +D+G Y C A N    D++   ++   
Sbjct: 456 SVQWLDEEGTTVLRDERFFPYANGTLAIRDLQANDTGRYFCQAAN----DQNNATIVANL 511

Query: 676 -LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETP 733
            +   +   Q P +            C A  +  L  +  W  +G      DL EL ++ 
Sbjct: 512 QVKEATQITQGPREAIEKKGSRATFTCQASFDPSLRPSLTWRGDG-----RDLQELGDSD 566

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH--- 790
              ID G L I N  + D G Y CV  + + ++  +  ++V G PG    V+V E H   
Sbjct: 567 KYFIDDGRLVIDNLEYGDQGNYSCVASTELDEVEARAQLLVVGSPGPVPHVEVSERHLLK 626

Query: 791 KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
            +   + WT    +   I  Y I      +A   W         H +GK     T     
Sbjct: 627 HSQVHLSWTPAEDHNAAIEKYDIEFEDKEMAPEKW---------HSLGKVPGNQT----- 672

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
           S    L P+  Y F+V A N+ G GEPS PS    TP   P + P  + G G +  ++ I
Sbjct: 673 STTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPVDVKGEGNETNNMVI 732

Query: 905 SWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           +W+PL     NAP + Y++ WR +     +Q +T+ +      + + + +   +  YE+K
Sbjct: 733 TWKPLRWMDWNAPQVQYRVQWRPQGTQGPWQEQTVSD------SFLVVTNTSTFEPYEIK 786

Query: 964 VQAINDVGPGPESEV 978
           VQA+N  G GPE +V
Sbjct: 787 VQAVNSQGKGPEPQV 801


>gi|344236690|gb|EGV92793.1| Neurofascin [Cricetulus griseus]
          Length = 1279

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 225/864 (26%), Positives = 360/864 (41%), Gaps = 118/864 (13%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP-------- 411
           Q    +YSCN +   + T +    F LKV  ++ +       N P  +  A         
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSL-RNHPDIYSVAKECLVFLGQ 257

Query: 412 ----------KAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKV 460
                     KA   + + C +   P P   W ++G  LP +   FENFN+ L I NV  
Sbjct: 258 PSDSAFAGFGKAAGPI-ICCASEPSPTPDIAWYKKGGDLPSDKTKFENFNKALRITNVSE 316

Query: 461 EDQGEYICRASNDRSALESSVTISIQAEPNF-TIPLTDKH---MDNQADLTWT------- 509
           ED GEY C ASN   ++  ++++ ++A   +  +P        +D   +L          
Sbjct: 317 EDSGEYFCLASNKMGSIRHTISVRVKACAIYICLPCLSAAPYWLDEPKNLILAPGEDGRL 376

Query: 510 -CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 568
            C A G P  T  W  NGE L S      + +R    D ++        R  A+YQC   
Sbjct: 377 VCRANGNPKPTVQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTS 431

Query: 569 NQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF----- 620
           N+     ++A + VL + P   S + + +    Y     +   F +P    +  F     
Sbjct: 432 NEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRCPFSVCCV 491

Query: 621 ----VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 673
               V  K+G   GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL
Sbjct: 492 RCSIVRFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRL 549

Query: 674 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELE 731
            V   P+   ++P    +     +QL C    +  L +   W  +   + IGN    E +
Sbjct: 550 EV-KDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDD 608

Query: 732 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EG 776
           +         L I   +  D G Y C+  + + +   K  + V               +G
Sbjct: 609 S---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKG 659

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
            P  P  +++ ++ + S  + W  G  N  PIT Y I     +    F      +  +  
Sbjct: 660 RPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVI----QFEEDQFQPG---VWHDHS 712

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
           ++ G   +++ + L P+  Y+F+VIA NE+G   PS PS +Y T    P   PS + G G
Sbjct: 713 KFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEG 771

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSE 954
            +  ++ I+W P+       PN+ Y + WR++       ET + + NV +   R  +   
Sbjct: 772 TRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQT 824

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
             Y  YE++VQA ND G GPE + 
Sbjct: 825 PVYVPYEIRVQAENDFGKGPEPDT 848


>gi|348552760|ref|XP_003462195.1| PREDICTED: neural cell adhesion molecule L1-like isoform 2 [Cavia
           porcellus]
          Length = 1252

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 203/795 (25%), Positives = 333/795 (41%), Gaps = 70/795 (8%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           +DI+L C A G P   + W K+       + L   + +      FT++G N         
Sbjct: 51  DDISLKCEARGKPEVQFRWMKDGVHFRPSEELGVTVHETPHSGSFTITGNNSFAQ----- 105

Query: 267 EDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
             +G Y C ASN+ G+ +S  +QL A G          P    +     + C+PP +   
Sbjct: 106 RFQGVYRCFASNQLGTAMSHEIQLMAEGAPKWPKEMVKPVEVEERESVVLPCNPPPSAEP 165

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFF 384
           +  YW      + +++D+RV +  +G LYF+ +   D+  +Y CN     + T       
Sbjct: 166 LRIYWMNSKILH-IKQDERVSMGQNGNLYFANVLISDSHSDYICNAHFPGTRTIIQKEPI 224

Query: 385 PLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
            L+V   +       +L FP N           G  + LEC+A G+P P+  W     P+
Sbjct: 225 DLRVKATNTMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEGFPTPTIKWLLPSGPM 282

Query: 441 PRNAY-FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 499
           P +   ++N N+ L + +V  +D GEY C A N          ++++A P++        
Sbjct: 283 PADRITYQNHNKTLQLLSVGEQDDGEYHCLAENSLGTARHVYYVTVEAAPDWLHKPKSGL 342

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
                     C+A G P    +W  NG  +      L+   +Y I    L +  + P  D
Sbjct: 343 YGPGETARLDCQAQGRPQPEITWRINGNRMEE----LDKDQKYQIHRGALILSNVQP-GD 397

Query: 560 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT-IFCNPEAAPKP 618
             + QC A+N+     ++A + V+ L    K   ++++TY G  G    + C    AP P
Sbjct: 398 TMVTQCEARNRHGHLLANAYIYVVQLPA--KILTVDNQTYMGVAGRTAYLLCKAFGAPVP 455

Query: 619 KFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV-- 675
              W  ++G  +    R   + NG L I  +  +D+G Y C A N    D++   ++   
Sbjct: 456 SVQWLDEEGTTVLRDERFFPYANGTLAIRDLQANDTGRYFCQAAN----DQNNATIVANL 511

Query: 676 -LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETP 733
            +   +   Q P +            C A  +  L  +  W  +G      DL EL ++ 
Sbjct: 512 QVKEATQITQGPREAIEKKGSRATFTCQASFDPSLRPSLTWRGDG-----RDLQELGDSD 566

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH--- 790
              ID G L I N  + D G Y CV  + + ++  +  ++V G PG    V+V E H   
Sbjct: 567 KYFIDDGRLVIDNLEYGDQGNYSCVASTELDEVEARAQLLVVGSPGPVPHVEVSERHLLK 626

Query: 791 KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
            +   + WT    +   I  Y I      +A   W         H +GK     T     
Sbjct: 627 HSQVHLSWTPAEDHNAAIEKYDIEFEDKEMAPEKW---------HSLGKVPGNQT----- 672

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
           S    L P+  Y F+V A N+ G GEPS PS    TP   P + P  + G G +  ++ I
Sbjct: 673 STTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPVDVKGEGNETNNMVI 732

Query: 905 SWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           +W+PL     NAP + Y++ WR +     +Q +T+ +      + + + +   +  YE+K
Sbjct: 733 TWKPLRWMDWNAPQVQYRVQWRPQGTQGPWQEQTVSD------SFLVVTNTSTFEPYEIK 786

Query: 964 VQAINDVGPGPESEV 978
           VQA+N  G GPE +V
Sbjct: 787 VQAVNSQGKGPEPQV 801


>gi|213626374|gb|AAI71560.1| Si:dkey-240a12.1 protein [Danio rerio]
          Length = 1291

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 223/829 (26%), Positives = 344/829 (41%), Gaps = 91/829 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +E P  +P+ P    Q P D + D  +     +I + C A G P+PS+ W +        
Sbjct: 29  LEVPLDLPQPPTITNQSPKDYIIDPRE-----NINIFCEAKGKPHPSFSWTRN------- 76

Query: 239 VANLIDPLSDKRFTL--SGGNLIINDPRQVED--RGSYHCKASNKFGSIISESVQLAFGF 294
                D   D +  +    GNL+I+   +  +   G Y C A N+ GS +S ++ +    
Sbjct: 77  -GTHFDVEKDPKVVMMPGTGNLVIDISGEKAEVYEGVYQCIARNEHGSAVSNNIVIRQSR 135

Query: 295 IGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
              ++ ++   I  Q     +  C PP   P    +W  + F   + ++ RV  + +G L
Sbjct: 136 SPLWSKEKNEPITVQRGTSLILQCRPPAGLPPPIIFWMDNNF-QRLPQNSRVSQALNGDL 194

Query: 354 YFSALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP------NNFPK- 405
           YFS +   D  N Y C  +                 FPH+   Q K P      +N P  
Sbjct: 195 YFSNVIMEDTRNDYICYAR-----------------FPHTQTIQQKQPITVKVLDNSPSG 237

Query: 406 ----TFPEAPKA--------GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-FENFNRI 452
               +F   P          GD + LEC+A G P P+ +WT+    LP   + F +F + 
Sbjct: 238 ERVPSFLHPPGMESTTMVLKGDTLELECIADGLPTPNISWTKVNGELPSGRFSFYSFQKT 297

Query: 453 LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEA 512
           L I  V   D G+Y C A N   + + ++T+ ++A P +     +  +  +     TC+ 
Sbjct: 298 LKIKEVTEADGGDYSCLAKNRMGSSQHTITVVVRAAPFWISAPQNLILAPKETGNLTCDV 357

Query: 513 FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 572
            G P  T +W  NG  + S      D  R  + D V+T+  +      A+YQC A N   
Sbjct: 358 DGNPKPTITWSVNGNPIESSH---NDPSRK-VSDGVITLSDVQTGSS-AVYQCNASNDYG 412

Query: 573 TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG 632
              ++A + VL   P      L  E          + C    +P PK  W KD   I + 
Sbjct: 413 YLLANAFVSVLAEPPRVLTS-LNHEYSVISNSRALLDCASFGSPLPKITWFKDSQNILNS 471

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
               I +NG L I+     +SG Y+C A+N  G  E+   L V   P+   + P    + 
Sbjct: 472 DLYHIHKNGTLEINVAQPQNSGKYTCIASNNLGNKENHVHLQVKE-PTRIIRQPEYKEVQ 530

Query: 693 AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFAD 751
            +      C    +  L  + IW          D  EL + P   +    L I + +  D
Sbjct: 531 RNSIAVFECKVKHDPTLIPSMIWLK--------DNGELPDDPRFEVGSDSLTIHDVTEDD 582

Query: 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811
            G Y C+  +T+ + S   T+ V   P  P  +++ +  + S  + WT G  +  PI  +
Sbjct: 583 EGTYTCIRNTTLDQDSASATLTVVEQPDPPTDLELTDQRERSVRLTWTPGDEHNSPIKLF 642

Query: 812 KIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
            I    + +    W N++E V G           A +E  L P+  Y F+V+A N +G  
Sbjct: 643 LIQYEDSLHEPGVWLNMTE-VSGTST-------TAQLE--LSPYVYYSFRVLALNGVGLS 692

Query: 870 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
           E S PS QY T   KP   PS +   G     ++ISW  L   + N P + YK+ WR K+
Sbjct: 693 ESSDPSRQYRTNPAKPDVNPSDVEVSGTSPDTMTISWRELSGLESNGPGLQYKVSWRMKD 752

Query: 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             ++ + TL    NV   VV     F  T YEV VQA+ND G GP  EV
Sbjct: 753 AEQWTTVTL---ANVSQHVVTGTPTF--TLYEVTVQAVNDYGEGPRPEV 796



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 153/684 (22%), Positives = 260/684 (38%), Gaps = 126/684 (18%)

Query: 346 FVSYDGALYFSALEQIDAGNYSC-------NVQSKVSDTGRNGPFFPLKVFPHSNFQQLK 398
           F S+   L    + + D G+YSC       + Q  ++   R  PF+              
Sbjct: 291 FYSFQKTLKIKEVTEADGGDYSCLAKNRMGSSQHTITVVVRAAPFW-------------- 336

Query: 399 FPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP---RNAYFENFNRILTI 455
              + P+    APK  +   L C   G P P+  W+  G+P+     +   +  + ++T+
Sbjct: 337 --ISAPQNLILAPK--ETGNLTCDVDGNPKPTITWSVNGNPIESSHNDPSRKVSDGVITL 392

Query: 456 PNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD--NQADLTWTCEAF 513
            +V+      Y C ASND   L ++  +S+ AEP   +   +      + +     C +F
Sbjct: 393 SDVQTGSSAVYQCNASNDYGYLLANAFVSVLAEPPRVLTSLNHEYSVISNSRALLDCASF 452

Query: 514 GVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQL 571
           G P    +WF++ + +LNS        D Y I  N  L I    P+ +   Y C A N L
Sbjct: 453 GSPLPKITWFKDSQNILNS--------DLYHIHKNGTLEINVAQPQ-NSGKYTCIASNNL 503

Query: 572 KTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPK--PKFVWK 623
             + +   L+V     +  +P +K+          +  ++ +F C  +  P   P  +W 
Sbjct: 504 GNKENHVHLQVKEPTRIIRQPEYKEV---------QRNSIAVFECKVKHDPTLIPSMIWL 554

Query: 624 KDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           KD   +    R   FE G+  L I  V+ DD G Y+C        D +   L V+  P  
Sbjct: 555 KDNGELPDDPR---FEVGSDSLTIHDVTEDDEGTYTCIRNTTLDQDSASATLTVVEQPDP 611

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTE-----ELLDVAY--------IWTHNGVRIGNMDLN 728
              L  ++T    R+++L  +   E     +L  + Y        +W +     G     
Sbjct: 612 PTDL--ELTDQRERSVRLTWTPGDEHNSPIKLFLIQYEDSLHEPGVWLNMTEVSGTSTTA 669

Query: 729 ELE-TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
           +LE +P +     +L +     +++ +     ++   K           P   P  V+V 
Sbjct: 670 QLELSPYVYYSFRVLALNGVGLSESSDPSRQYRTNPAK-----------PDVNPSDVEVS 718

Query: 788 EVHKTSATIQWTD--GATNGRPITHYKIIART----NWNS-TWFNVSEHVIGKEVDRYTG 840
                + TI W +  G  +  P   YK+  R      W + T  NVS+HV+       TG
Sbjct: 719 GTSPDTMTISWRELSGLESNGPGLQYKVSWRMKDAEQWTTVTLANVSQHVV-------TG 771

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY---NTPADKPYQAPSRIGGGGG 897
                       ++ YE  V A N+ G G    P P+     +  + P  AP  +     
Sbjct: 772 TPT---------FTLYEVTVQAVNDYGEG----PRPEVVLGYSGENSPTVAPENVKVSVQ 818

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI-----AVVRIP 952
              +  + WE +P          YK+ ++K      Q +  +E   V I      V R+P
Sbjct: 819 SETEAEVHWEAVPLSSVRGRLKGYKVTYQKMRSLHKQ-DYDRENPQVLIFSGEETVGRLP 877

Query: 953 SEFYYTEYEVKVQAINDVGPGPES 976
               Y+ Y + ++A N  G GP S
Sbjct: 878 DLHPYSHYRLNIRAFNGHGDGPSS 901


>gi|395860583|ref|XP_003802590.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Otolemur
           garnettii]
          Length = 1257

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 215/833 (25%), Positives = 367/833 (44%), Gaps = 84/833 (10%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY-- 233
           IE P++   G + ++ P  V+ + S R ++    +DI+L C A G P   + W K+    
Sbjct: 20  IEIPEEY-EGHHVMEPP--VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTKDGIHF 76

Query: 234 -VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAF 292
             ++ L   +        FT++G N       Q    G Y C ASNK G+ +S  +QL  
Sbjct: 77  QPKEELGVTVQQLPHSGSFTITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHKIQLMA 132

Query: 293 GFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
               ++  +    +  +     +  C PP +   +  YW      + +++D+RV +  +G
Sbjct: 133 EGAPKWPKETVKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNG 191

Query: 352 ALYFSALEQID-AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKT 406
            LYF+ +   D   +Y C+     + T        L+V   ++      +L FP N    
Sbjct: 192 NLYFANVITSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSH 251

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
                  G+ + LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GE
Sbjct: 252 L--VALQGEPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGE 309

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFR 524
           Y C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  
Sbjct: 310 YRCLAENSLGSARHAYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG  +  E LP +DQ +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ 
Sbjct: 369 NG--IPVEELP-KDQ-KYQIQRGALILSNVQPS-DTMVTQCEARNRHGVLLANAYIYVVQ 423

Query: 585 LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN 642
           L         +++TY A EG    + C    AP P   W  ++G  +    R   + NG 
Sbjct: 424 LPAKILTG--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGT 481

Query: 643 LLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHR 695
           L I  +  +D+G Y C A N      +    + K    ++ GP S  E+   ++T     
Sbjct: 482 LGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFT--- 538

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGE 754
                C A  +  L  +  W  +G      DL+EL ++    I+ G L I +  ++D G 
Sbjct: 539 -----CQASFDPSLQPSITWRGDG-----GDLHELGDSDKYFIEDGRLVIHSLDYSDQGN 588

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHY 811
           Y C+  + +  + +K  ++V G PGL   +++ ++H   ++   + W+    +  PI  Y
Sbjct: 589 YSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEKY 648

Query: 812 KI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
            I      +A   W S         +GK     T    A+++  L P+  Y F+V A N+
Sbjct: 649 DIEFEDKEMAPEKWYS---------LGKVPGNQT---SATLK--LSPYVHYTFRVTAINK 694

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
            G GEPS  S    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ W
Sbjct: 695 YGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQW 754

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           R +       E +     V    + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 755 RPQGTRGIWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|395860585|ref|XP_003802591.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Otolemur
           garnettii]
          Length = 1253

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 215/833 (25%), Positives = 367/833 (44%), Gaps = 84/833 (10%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY-- 233
           IE P++   G + ++ P  V+ + S R ++    +DI+L C A G P   + W K+    
Sbjct: 20  IEIPEEY-EGHHVMEPP--VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTKDGIHF 76

Query: 234 -VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAF 292
             ++ L   +        FT++G N       Q    G Y C ASNK G+ +S  +QL  
Sbjct: 77  QPKEELGVTVQQLPHSGSFTITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHKIQLMA 132

Query: 293 GFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
               ++  +    +  +     +  C PP +   +  YW      + +++D+RV +  +G
Sbjct: 133 EGAPKWPKETVKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNG 191

Query: 352 ALYFSALEQID-AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKT 406
            LYF+ +   D   +Y C+     + T        L+V   ++      +L FP N    
Sbjct: 192 NLYFANVITSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSH 251

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
                  G+ + LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GE
Sbjct: 252 L--VALQGEPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGE 309

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFR 524
           Y C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  
Sbjct: 310 YRCLAENSLGSARHAYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRI 368

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           NG  +  E LP +DQ +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ 
Sbjct: 369 NG--IPVEELP-KDQ-KYQIQRGALILSNVQPS-DTMVTQCEARNRHGVLLANAYIYVVQ 423

Query: 585 LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN 642
           L         +++TY A EG    + C    AP P   W  ++G  +    R   + NG 
Sbjct: 424 LPAKILTG--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGT 481

Query: 643 LLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHR 695
           L I  +  +D+G Y C A N      +    + K    ++ GP S  E+   ++T     
Sbjct: 482 LGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFT--- 538

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGE 754
                C A  +  L  +  W  +G      DL+EL ++    I+ G L I +  ++D G 
Sbjct: 539 -----CQASFDPSLQPSITWRGDG-----GDLHELGDSDKYFIEDGRLVIHSLDYSDQGN 588

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHY 811
           Y C+  + +  + +K  ++V G PGL   +++ ++H   ++   + W+    +  PI  Y
Sbjct: 589 YSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEKY 648

Query: 812 KI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
            I      +A   W S         +GK     T    A+++  L P+  Y F+V A N+
Sbjct: 649 DIEFEDKEMAPEKWYS---------LGKVPGNQT---SATLK--LSPYVHYTFRVTAINK 694

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
            G GEPS  S    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ W
Sbjct: 695 YGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQW 754

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           R +       E +     V    + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 755 RPQGTRGIWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|395860587|ref|XP_003802592.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Otolemur
           garnettii]
          Length = 1248

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 215/831 (25%), Positives = 362/831 (43%), Gaps = 85/831 (10%)

Query: 180 IENPDKIPRGPYFIKQPTD--VVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY---V 234
           IE P+++   P   +Q     VVF        +DI+L C A G P   + W K+      
Sbjct: 20  IEIPEELMEPPVITEQSPRRLVVFPT------DDISLKCEASGKPEVQFRWTKDGIHFQP 73

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
           ++ L   +        FT++G N       Q    G Y C ASNK G+ +S  +QL    
Sbjct: 74  KEELGVTVQQLPHSGSFTITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHKIQLMAEG 129

Query: 295 IGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
             ++  +    +  +     +  C PP +   +  YW      + +++D+RV +  +G L
Sbjct: 130 APKWPKETVKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNL 188

Query: 354 YFSALEQID-AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFP 408
           YF+ +   D   +Y C+     + T        L+V   ++      +L FP N      
Sbjct: 189 YFANVITSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL- 247

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYI 467
                G+ + LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY 
Sbjct: 248 -VALQGEPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYR 306

Query: 468 CRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNG 526
           C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  NG
Sbjct: 307 CLAENSLGSARHAYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
             +  E LP +DQ +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L 
Sbjct: 366 --IPVEELP-KDQ-KYQIQRGALILSNVQPS-DTMVTQCEARNRHGVLLANAYIYVVQLP 420

Query: 587 PSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLL 644
                   +++TY A EG    + C    AP P   W  ++G  +    R   + NG L 
Sbjct: 421 AKILTG--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLG 478

Query: 645 ISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNL 697
           I  +  +D+G Y C A N      +    + K    ++ GP S  E+   ++T       
Sbjct: 479 IRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFT----- 533

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYE 756
              C A  +  L  +  W  +G      DL+EL ++    I+ G L I +  ++D G Y 
Sbjct: 534 ---CQASFDPSLQPSITWRGDG-----GDLHELGDSDKYFIEDGRLVIHSLDYSDQGNYS 585

Query: 757 CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI 813
           C+  + +  + +K  ++V G PGL   +++ ++H   ++   + W+    +  PI  Y I
Sbjct: 586 CLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEKYDI 645

Query: 814 ------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
                 +A   W S         +GK     T    A+++  L P+  Y F+V A N+ G
Sbjct: 646 EFEDKEMAPEKWYS---------LGKVPGNQT---SATLK--LSPYVHYTFRVTAINKYG 691

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            GEPS  S    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR 
Sbjct: 692 PGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRP 751

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +       E +     V    + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 752 QGTRGIWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 797


>gi|197215678|gb|ACH53067.1| L1 cell adhesion molecule isoform 2 precursor (predicted) [Otolemur
           garnettii]
          Length = 1226

 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 210/814 (25%), Positives = 357/814 (43%), Gaps = 81/814 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W K+      ++ L   +        F
Sbjct: 5   VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTKDGIHFQPKEELGVTVQQLPHSGSF 64

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW 311
           T++G N       Q    G Y C ASNK G+ +S  +QL      ++  +    +  +  
Sbjct: 65  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHKIQLMAEGAPKWPKETVKPVEVEEG 120

Query: 312 GKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQID-AGNYSCN 369
              +  C PP +   +  YW      + +++D+RV +  +G LYF+ +   D   +Y C+
Sbjct: 121 ESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVITSDNHSDYICH 179

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G+ + LEC+A G
Sbjct: 180 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGEPLVLECIAEG 237

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +   +  ++
Sbjct: 238 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHAYYVT 297

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           ++A P + +     H+    +     C+  G P    +W  NG  +  E LP +DQ +Y 
Sbjct: 298 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING--IPVEELP-KDQ-KYQ 352

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGE 602
           IQ   L +  + P  D  + QC A+N+     ++A + V+ L         +++TY A E
Sbjct: 353 IQRGALILSNVQPS-DTMVTQCEARNRHGVLLANAYIYVVQLPAKILTG--DNQTYMAVE 409

Query: 603 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 661
           G    + C    AP P   W  ++G  +    R   + NG L I  +  +D+G Y C A 
Sbjct: 410 GSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAA 469

Query: 662 N------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
           N      +    + K    ++ GP S  E+   ++T          C A  +  L  +  
Sbjct: 470 NDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFT--------CQASFDPSLQPSIT 521

Query: 715 WTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           W  +G      DL+EL ++    I+ G L I +  ++D G Y C+  + +  + +K  ++
Sbjct: 522 WRGDG-----GDLHELGDSDKYFIEDGRLVIHSLDYSDQGNYSCLASTELDMVESKAQLL 576

Query: 774 VEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWF 824
           V G PGL   +++ ++H   ++   + W+    +  PI  Y I      +A   W S   
Sbjct: 577 VVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS--- 633

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
                 +GK     T    A+++  L P+  Y F+V A N+ G GEPS  S    TP   
Sbjct: 634 ------LGKVPGNQT---SATLK--LSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAA 682

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 944
           P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V
Sbjct: 683 PEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRPQGTRGIWQEQI-----V 737

Query: 945 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 738 SDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 771


>gi|47229254|emb|CAG04006.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1238

 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 227/869 (26%), Positives = 368/869 (42%), Gaps = 128/869 (14%)

Query: 195 QPTDVVFDLSKRSILND---ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRF 251
           QP  ++    K  I++    + + C A G P+P + W +      R      DP +  R 
Sbjct: 1   QPPTIIKQSMKEHIVDAKDAMVIECEAKGNPHPIFSWRR----NGRYYNVARDPQASMR- 55

Query: 252 TLSGGNLII---NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE--- 305
               G L I   N+P Q E    Y C ASN +GS  S  ++L         L RAP    
Sbjct: 56  -RHSGTLDIYARNNPEQYE--AEYQCVASNMYGSAYSNKIRL--------RLYRAPVWPR 104

Query: 306 ------IGNQNWGKAMFCDPPTNYPGVNYYW----------------------------- 330
                 + +      + CDPP   P    YW                             
Sbjct: 105 EIIEPVVISAGLPLVLSCDPPPGPPKPETYWMSSCECVLNRDRARGRQQQTQTHSCVAAG 164

Query: 331 --ARDY-------FPNF--VEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTG 378
             AR +        P    V +D+RV +  +G LYFS +   D+  +Y CN +    +  
Sbjct: 165 SFARPFNWPIQTAVPTMQPVRQDRRVSMGVNGDLYFSNVHFNDSVADYCCNARLPYRNVI 224

Query: 379 RNGPFFPLKVFPHSNFQQLKFPNNFPK--TFPEAPKAGDKVRLECVAFGYPVPSYNWTRR 436
           +      +KV    +  +       PK  +       G+++ LEC+A G P P   W + 
Sbjct: 225 QQKRPVVVKVLTTRSVVESAPTWLSPKGSSSSTLVLLGEELLLECIAAGVPTPHITWRKD 284

Query: 437 GSPL----PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFT 492
           G  L    P  A  +NFN+++ IP    ED GEY+C A+N    ++ ++T+ ++A P + 
Sbjct: 285 GEDLVVRSPVKA--KNFNKMIQIPRASFEDAGEYVCTATNKLDYIQHTITVQVKAAPFWL 342

Query: 493 IPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR 552
               D  +  + D    C + G P  T +WF NGE ++  TL    Q    +    + +R
Sbjct: 343 EKPADLVLAPEEDGRLVCRSDGAPRPTVTWFINGEPIDPSTL----QPNVEVSGETVVLR 398

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            +    + A+YQC A N      ++A + VL   P       E      EG    + C  
Sbjct: 399 TVTTLNN-AVYQCNASNPYGYLLANAFVNVLHATPRILGSRNEYLKVI-EGSRAFLDCRY 456

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
             +P P+  W K G     G R +   NG L I  +   D G Y C  +NV G DE++ R
Sbjct: 457 FGSPVPELRWSKYGQGSLEGNRFRTHSNGTLEIKNIQVVDQGAYLCVVSNVAGRDENQVR 516

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 732
           + V   P+     P  + +    +++  C+  T+    V   W   G +   +       
Sbjct: 517 IEVKE-PTLIVTRPTDMKVIRGADVRFECAVKTDATTPVTTTWM-KGTKPVTLGW----- 569

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 792
             I++D   L I+N + AD G Y C+VKS + + S    ++V   P  P  +++ + H+ 
Sbjct: 570 -RISMDESNLVISNINTADGGNYTCLVKSELEQKSASARLMVMDRPDPPTDLELSDPHER 628

Query: 793 SATIQWTDGATNGRPITHYKIIART------NWNSTW-FNVSEHVIG-----------KE 834
           S  + W  G ++  PIT  +   ++       ++ T+   V+++++            K 
Sbjct: 629 SVRLSWVPGNSHHNPITGERCPGKSVSSIFPTFSITYTCAVADNLVQYDDDDWLPGKWKN 688

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           +  Y G   + I + L+P++ YEF+VIA NE+G   PS PS ++ +    P   P  + G
Sbjct: 689 LSLYPGNLNSVILH-LLPFTYYEFRVIAINEIGMSRPSRPSSRFQSSGAPPDVIPKNLKG 747

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
            G    ++ ISWEPL  +  N P++ Y ++W++K+  E       E+ N   A  R    
Sbjct: 748 VGTWRNNMEISWEPLAYKDWNGPHLKYLVWWKRKDSRE-------EWKN---ATTRWSKY 797

Query: 955 FYY-----TEYEVKVQAINDVGPGPESEV 978
           + Y     T Y++KVQA+ND G GPES +
Sbjct: 798 YIYGADTFTPYDLKVQAVNDFGMGPESPI 826


>gi|395516502|ref|XP_003762426.1| PREDICTED: neural cell adhesion molecule L1-like protein
           [Sarcophilus harrisii]
          Length = 1266

 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 203/798 (25%), Positives = 332/798 (41%), Gaps = 72/798 (9%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQVEDRGSY 272
           C A G P P++ W K +             LSD R   S   G   I+N+      +G Y
Sbjct: 58  CEAKGNPEPTFHWTKNE--------EHFSLLSDPRIISSNNTGTFKILNEGHITHFQGKY 109

Query: 273 HCKASNKFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWA 331
            C ASN+ G+ +SE +      I +F   K  P    +     + C+PP   P ++ YW 
Sbjct: 110 RCFASNELGTAMSEEIDFIVPSIPKFPKEKIEPLEVEEGNSIVLHCNPPKGIPPLHIYWM 169

Query: 332 RDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQ-SKVSDTGRNGPF-FPLKV 388
                  + +D+RV++S  G LYF+ +E+ D+  +Y C     ++    +  P    +  
Sbjct: 170 NIDL-QHIPQDERVYMSQKGDLYFANVEENDSRSDYCCFAAFPRLRTIVQKMPMKLTVNS 228

Query: 389 FPHSN-----FQQLKFPNNFPKTFPEA---PKA-----------GDKVRLECVAFGYPVP 429
             H+N      Q +   N+  +  P     P+            G  + LEC A G P P
Sbjct: 229 LKHANDSSSHRQNITKANSIKQRQPRMLLPPETSGSHSSVTIIKGGTLLLECFAEGLPTP 288

Query: 430 SYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
              W + G  LP+     ENF + L I  V   D+G Y C A N +        ++++  
Sbjct: 289 QITWMKVGEDLPKGREERENFGKTLKIEQVTHMDKGHYRCMAKNYKGTATHEFRVTVEEP 348

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P +T           ++    CEA G P     W  NG  +N  +LP      +F  +  
Sbjct: 349 PRWTKKPESAVYSIGSNGILLCEAEGEPAPEIEWKINGLPVNKHSLP---GIVFFPGEIS 405

Query: 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
                LN      +YQC A N      ++A + VL + P   + P +    A  G +  +
Sbjct: 406 FNNIQLN---HTGVYQCEATNVHGKILATANINVLDISP-LMQTPDDEGYAAVVGYSAYL 461

Query: 609 FCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
           FC+  A+P     W+K   +    G      +NG L I   +++D+G Y+C   +  G  
Sbjct: 462 FCDVFASPPAVITWQKPSKVERLEGPHYTTHQNGTLEIKKTTKEDAGPYTCWVKSPRGEV 521

Query: 668 ESKGRLIVLHGPSY-YEQLPPKITIAAHR---NLQLRCSAHTEELLDVAYIWTHNGVRI- 722
                L +    +     L P + I +H    + ++ C +H +  L +++      +   
Sbjct: 522 AVTAHLAIRDATNLTISPLNPHV-IKSHLLVLHCEIECDSHLKHSLKLSWSKDEEALEAN 580

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
           G  D++      I IDG  L I+N +  D G Y C V + +      T VI+   P  P 
Sbjct: 581 GTEDISR-----ITIDGDKLTISNVTLEDEGSYSCHVNTALDGAVATTQVIILDVPDPPE 635

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTG 840
            + + E    S  + W  G ++   IT + I    N +           GK  E+ +  G
Sbjct: 636 NLHISERQNRSVRLTWEAGDSHNSIITEFIIEFEGNKDEP---------GKWAELTKIQG 686

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
            +  ++ + L P+  Y+F+VI  N +G   PS PS  + TP   P + P  I     +  
Sbjct: 687 NETTALLS-LAPYVKYQFRVIGVNAVGRSLPSDPSDYHETPPAAPDKNPDNIKVEASQPK 745

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           ++ I WEPL   ++N P + Y++ WR++      S+ L          +R+ +   +T Y
Sbjct: 746 EMFIKWEPLKSMERNGPGLEYRVSWRQQGVPSEWSDELATDN-----TLRVMTSSVFTPY 800

Query: 961 EVKVQAINDVGPGPESEV 978
           +VKVQAIN +G GPE + 
Sbjct: 801 DVKVQAINQLGSGPEPQT 818



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 132/587 (22%), Positives = 224/587 (38%), Gaps = 60/587 (10%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAY--FENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P   W   G P+ +++      F   ++  N+++   G Y C A+N    
Sbjct: 368 LLCEAEGEPAPEIEWKINGLPVNKHSLPGIVFFPGEISFNNIQLNHTGVYQCEATNVHGK 427

Query: 477 LESSVTISI-QAEPNFTIPLTDKHMDNQADLTWT-CEAFGVPDVTYSWFRNGELLNSETL 534
           + ++  I++    P    P  + +        +  C+ F  P    +W +      S+  
Sbjct: 428 ILATANINVLDISPLMQTPDDEGYAAVVGYSAYLFCDVFASPPAVITWQKP-----SKVE 482

Query: 535 PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLKPSF 589
            LE       Q+  L I+    E D   Y C  K+       +A L +     LT+ P  
Sbjct: 483 RLEGPHYTTHQNGTLEIKKTTKE-DAGPYTCWVKSPRGEVAVTAHLAIRDATNLTISP-L 540

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI----FENGNLLI 645
               ++S        +  I C+       K  W KD   + + G   I     +   L I
Sbjct: 541 NPHVIKSHLLVL---HCEIECDSHLKHSLKLSWSKDEEALEANGTEDISRITIDGDKLTI 597

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-H 704
           S V+ +D G YSC          +  ++I+L  P   E L   I+   +R+++L   A  
Sbjct: 598 SNVTLEDEGSYSCHVNTALDGAVATTQVIILDVPDPPENL--HISERQNRSVRLTWEAGD 655

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 764
           +   +   +I    G +       EL     N    LL +  A +    ++  +  + VG
Sbjct: 656 SHNSIITEFIIEFEGNKDEPGKWAELTKIQGNETTALLSL--APYVKY-QFRVIGVNAVG 712

Query: 765 K-ISTKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWTDGATNGR--PITHYKIIART 817
           + + +  +   E PP  P      ++V         I+W    +  R  P   Y++  R 
Sbjct: 713 RSLPSDPSDYHETPPAAPDKNPDNIKVEASQPKEMFIKWEPLKSMERNGPGLEYRVSWRQ 772

Query: 818 NW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
               S W   S+ +      R          +V  P   Y+ KV A N+LG G    P P
Sbjct: 773 QGVPSEW---SDELATDNTLRVM------TSSVFTP---YDVKVQAINQLGSG----PEP 816

Query: 877 QYNTP---ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
           Q  T     D P  APS +         ++++W+ +P+E+ +     Y+I W K      
Sbjct: 817 QTITVYSGEDYPDAAPSSVSASVINSTLINVTWDRIPKERVHGHLRGYQINWWKTKSRLD 876

Query: 934 QSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPES 976
           + +  KE   + +A  R    +PS   ++E+++ V A N  G GPES
Sbjct: 877 ERKFPKEIKTLRLAGDRSYGMVPSLDPFSEFKLTVLAYNSKGAGPES 923



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 117/311 (37%), Gaps = 57/311 (18%)

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAMYQ 564
           + CEA G P+ T+ W +     N E   L    R    +N  T + LN          Y+
Sbjct: 56  FVCEAKGNPEPTFHWTK-----NEEHFSLLSDPRIISSNNTGTFKILNEGHITHFQGKYR 110

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           C A N+L T  S     ++   P F K    PLE E    EG ++ + CNP     P  +
Sbjct: 111 CFASNELGTAMSEEIDFIVPSIPKFPKEKIEPLEVE----EGNSIVLHCNPPKGIPPLHI 166

Query: 622 W--KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------ 660
           +    D   I    R  + + G+L  + V  +DS   Y C A                  
Sbjct: 167 YWMNIDLQHIPQDERVYMSQKGDLYFANVEENDSRSDYCCFAAFPRLRTIVQKMPMKLTV 226

Query: 661 -TNVHGMDESKGRLIVLHGPSYYEQ-----LPPK-------ITIAAHRNLQLRCSAHTEE 707
            +  H  D S  R  +    S  ++     LPP+       +TI     L L C A  E 
Sbjct: 227 NSLKHANDSSSHRQNITKANSIKQRQPRMLLPPETSGSHSSVTIIKGGTLLLECFA--EG 284

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
           L      W    +++G  DL +      N  G  L+I   +  D G Y C+ K+  G  +
Sbjct: 285 LPTPQITW----MKVGE-DLPKGREERENF-GKTLKIEQVTHMDKGHYRCMAKNYKGTAT 338

Query: 768 TKTTVIVEGPP 778
            +  V VE PP
Sbjct: 339 HEFRVTVEEPP 349



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 153/397 (38%), Gaps = 75/397 (18%)

Query: 134 SFSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFI 193
           +F ++LK    E+VT M+   + C A   K         T+++ + +E P      P + 
Sbjct: 308 NFGKTLK---IEQVTHMDKGHYRCMAKNYK------GTATHEFRVTVEEP------PRWT 352

Query: 194 KQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL 253
           K+P   V+ +    IL      C A G P P  EW              I+ L   + +L
Sbjct: 353 KKPESAVYSIGSNGIL-----LCEAEGEPAPEIEW-------------KINGLPVNKHSL 394

Query: 254 SG-----GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE--- 305
            G     G +  N+  Q+   G Y C+A+N  G I++ +       +    L + P+   
Sbjct: 395 PGIVFFPGEISFNN-IQLNHTGVYQCEATNVHGKILATA---NINVLDISPLMQTPDDEG 450

Query: 306 -IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE--EDKRVFVSYDGALYFSALEQID 362
                 +   +FCD   + P V   W +   P+ VE  E        +G L      + D
Sbjct: 451 YAAVVGYSAYLFCDVFASPPAV-ITWQK---PSKVERLEGPHYTTHQNGTLEIKKTTKED 506

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV---RL 419
           AG Y+C V+S         P   + V  H   +        P   P   K+   V    +
Sbjct: 507 AGPYTCWVKS---------PRGEVAVTAHLAIRDATNLTISPLN-PHVIKSHLLVLHCEI 556

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI------LTIPNVKVEDQGEYICRASN- 472
           EC +        +W++    L  N   E+ +RI      LTI NV +ED+G Y C  +  
Sbjct: 557 ECDSHLKHSLKLSWSKDEEALEANGT-EDISRITIDGDKLTISNVTLEDEGSYSCHVNTA 615

Query: 473 -DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTW 508
            D +   + V I    +P   + ++++  +    LTW
Sbjct: 616 LDGAVATTQVIILDVPDPPENLHISERQ-NRSVRLTW 651


>gi|410898986|ref|XP_003962978.1| PREDICTED: neural cell adhesion molecule L1-like [Takifugu
           rubripes]
          Length = 1258

 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 201/791 (25%), Positives = 342/791 (43%), Gaps = 87/791 (10%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED-R 269
           DI L C A G P P++ W K+  +               R  L  G L   +   ++   
Sbjct: 52  DIHLPCKAKGNPPPTFHWMKDGVL--------------IRSGLHLGTLKAEEEEPLQQFE 97

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW-GKAMF--CDPPTNYPGV 326
           G Y C ASN +G+ +++SVQ+      +  L +  ++  +++ G+++   C+PP +    
Sbjct: 98  GHYRCYASNDYGTAMTQSVQVIVE--AQPVLPKQQQVHKESYEGESIILSCNPPESSTPP 155

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFP 385
             +W  D     + + +RV V  DG LYFS L + D+  +Y CN Q   + T        
Sbjct: 156 VIHWM-DKLMVHISQSERVLVGLDGKLYFSNLLRNDSRTDYMCNAQYLAARTILTESVIS 214

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKA---GDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
           L V P ++  Q + P+ F  T P +      G KV LEC+  G P P   W ++   L  
Sbjct: 215 LTVVPSNDVAQARKPHFFKHTGPHSSVLALRGHKVTLECIPKGLPTPKVEWKKKDGRLGE 274

Query: 443 NA-YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
            +   +  NR     ++ + D GEY C+A N       S T++++A P +      +   
Sbjct: 275 TSGQLDKHNRWFHFESIGLNDDGEYECKAWNSHGFTTHSFTVTVEAAPYWVKKPASQLYS 334

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
               +   C+A G+P  + +W  NG  +      +E++ R  +   VL +R +    D A
Sbjct: 335 PGETVRLDCQAEGIPTPSITWSINGRNITE----VEEEPRRSVSGGVLILRDVV-FADTA 389

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY---AGEGGNVTIFCNPEAAPKP 618
           +YQC A N+  +   +  L V+ L P      L S+       EG N+ + C    +P+P
Sbjct: 390 VYQCEATNKHGSALLNTFLHVVELPPQI----LTSDGLLYRVTEGRNILMDCEVFGSPRP 445

Query: 619 KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 678
                          + +IF+        V  DD+G+YSC+    H  + S    + ++ 
Sbjct: 446 HITCCYHTR------KTQIFDLC------VDHDDAGVYSCSVK--HNNNVSINAHLEVYN 491

Query: 679 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRI-GNMDLNELETPNIN 736
            +     P  +      N  L C  +T+  L  A  +W  +G ++ G+   N+       
Sbjct: 492 RTVIPAPPQNLRFLRGTNALLTCGFYTDPRLPPAQVVWRRDGHKLMGSETANKYSV---- 547

Query: 737 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 796
            + G L+++N  F D+ +Y C V S +  +    ++ V   P  P  + + EV   + T+
Sbjct: 548 FEDGTLKVSNIQFNDSAQYSCEVISLLDHVKAMGSITVVDRPDPPKYLSLAEVTDHNLTL 607

Query: 797 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK-EASIENV---LVP 852
            WT G+ +  P+  + +          F   +H  GK+      +K  A +++V   L P
Sbjct: 608 NWTPGSAHNSPMIDFIV---------EFREEQHTEGKKWKWEEMKKVPADVQHVQLSLRP 658

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           + TY F+VIA NE+G  +PS PS  Y T    P + P+ +         L I+W+ + + 
Sbjct: 659 FCTYRFRVIAVNEVGRSDPSEPSDTYRTSPAVPDRNPTGVRSESADPDSLVITWDEMDKM 718

Query: 913 KQNAPNIYYKIFWR--KKNDTEFQSETLKE----YGNVGIAVVRIPSEFYYTEYEVKVQA 966
             N     Y++ WR  +K D  + S  +K       N G           YT +E+KV+A
Sbjct: 719 YHNGHGFLYEVSWREARKRDARWNSAEVKSPPFLVQNTGT----------YTPFEIKVKA 768

Query: 967 INDVGPGPESE 977
           +N +G GP  E
Sbjct: 769 VNSLGSGPAPE 779


>gi|444727034|gb|ELW67542.1| Neural cell adhesion molecule L1-like protein [Tupaia chinensis]
          Length = 1138

 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 202/785 (25%), Positives = 332/785 (42%), Gaps = 79/785 (10%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS---GGNLIINDPRQVEDRG 270
           + C A G P P++ W K+D   D         LSD R   S   G   I N+      +G
Sbjct: 37  IECEAKGNPEPTFRWTKDDKPFD---------LSDPRIITSNNSGTFKIPNEGHISHFQG 87

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYY 329
            Y C ASNK G  +SE ++     + +F  ++   +  +     +  C+PP   P ++ Y
Sbjct: 88  KYRCLASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVEEGDPIVLPCNPPKGLPPLHIY 147

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPL 386
           W        +  D+ V++S  G LYF+ +E+ D+ N  C   +  ++    +  P    +
Sbjct: 148 W--------MNIDEGVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTV 199

Query: 387 KVFPHSN--------------FQQLKFPNNFPKTFPEAPKA-----GDKVRLECVAFGYP 427
               H+N               +Q K     P T      +     G+ + LEC A G P
Sbjct: 200 NSLKHANDSSSSTEIDSKANSIKQRKPRLLLPPTESGRESSITILKGNTLLLECFAEGLP 259

Query: 428 VPSYNWTRRGSPLPRNAYFE-NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486
            P  +W + G  LP+    E N   IL I NV  +D+G Y C ASN          ++++
Sbjct: 260 TPQVDWNKMGGALPKERETEKNDGNILKIENVSYQDKGNYRCTASNFLGTATHDFHVTVE 319

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
             P++T           +     CEA G P  T  W  NG  +++        D  F ++
Sbjct: 320 EPPHWTKKPQSGVYSTGSSGILLCEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE 376

Query: 547 NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-N 605
             ++   L P    A+YQC A N   T  ++A + V+ ++P  +    + E YA   G +
Sbjct: 377 --ISFTNLQPNHT-AVYQCEASNVHGTILANANIDVVDVRPLIQTE--DEENYATVLGYS 431

Query: 606 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVH 664
             + C   A+P+    W+K        GRR  I  NG L I+  + +D+G YSC   N  
Sbjct: 432 AFLHCEYFASPEAIVSWQKVDEAKPLEGRRYHIHGNGTLQINRTTEEDAGSYSCWVENAI 491

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRI 722
           G       L + +  +     P    +     L+L C +  +  L   +   W+ +G   
Sbjct: 492 GKTAVTANLDIRNA-TELRVSPKNPRVPKSHMLELHCESKCDSHLKHSLKLSWSKDGEA- 549

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
              ++N  E   I IDG  L I+N +  D G Y C+ ++ +  I+  T V V   P  P 
Sbjct: 550 --FEINGTEDGRIMIDGANLTISNITLEDQGIYTCLAQTALDSIADITQVTVLDVPDPPE 607

Query: 783 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTG 840
            + + E    S  + W  G  +   I+ Y +    N      W         +E+ R  G
Sbjct: 608 NLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNREEPGRW---------EELSRVQG 658

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
            K+ ++   L P+  Y+F+VIA NE+G  +PS PS  + TP   P + P  I     +  
Sbjct: 659 -KDTTVVLALAPYVRYQFRVIAVNEVGRSQPSHPSDHHETPPAAPDKNPQNIRVQASQPK 717

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTE 959
           ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y  
Sbjct: 718 EMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTVYAP 771

Query: 960 YEVKV 964
           Y+V++
Sbjct: 772 YDVQL 776


>gi|443706398|gb|ELU02465.1| hypothetical protein CAPTEDRAFT_220777 [Capitella teleta]
          Length = 1327

 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 188/722 (26%), Positives = 331/722 (45%), Gaps = 71/722 (9%)

Query: 246 LSDKRFTLSG-----------GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
           ++DK F  SG           G LI   P +  D G Y C A+N+ G+ ++  + L    
Sbjct: 67  MNDKDFDPSGNDGRIAIQPGVGTLIFARPIE-RDEGIYQCLANNQVGTALTVKIDLKLAI 125

Query: 295 IGEFNLK----RAPEIGNQNWGKAMFCDPPTNYPGVNYYWA-----RDYFPNFVEEDKRV 345
           +  F         P +G+      + C PP ++P  + +WA       + P  ++   RV
Sbjct: 126 LEPFQPSGTRYHRPNLGHP---LTLRCVPPRSFPAADIFWATISDGERFTP--IDLTDRV 180

Query: 346 FVSYDGALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPH-SNFQQLKFPN 401
            +  +G L+F+ +  ID  N   Y+C VQ+ V  + + G +  ++  P   N Q +    
Sbjct: 181 TMDPEGNLHFAHVLNIDGQNGKTYACIVQNTVMRSIQQGEYAIIQ--PQGQNIQYMP--- 235

Query: 402 NFPKTFPEAPKAGDKVR-----LECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIP 456
             P+   ++P  G  +R     ++CV  G P P  +W R G  +P  +  E+F + L I 
Sbjct: 236 --PEIMWQSPTHGVALRGQTWRIKCVFSGSPTPRVDWDRVGEAMPSRSRQESFGQELVIE 293

Query: 457 NVKVEDQGEYICRASND--RSALESSVTISIQAEPNFTIPLTDKHMDNQA--DLTWTCEA 512
           +V+ ED G+Y C+  ND  ++ +  S  ++I++ P +TI      +D        +TC+ 
Sbjct: 294 DVQFEDAGKYECQGINDEAQTPIRRSFDLAIESAPFWTIDGRPMSVDGAEFDKAEFTCQT 353

Query: 513 FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 572
             +P     WF NG  ++   +P  D  R  + + +  I Y   + D  + QC + N+  
Sbjct: 354 EAIPAPVSFWFLNGIPISK--VP-ADPRRVTVGNKL--IFYNMTKEDAQVIQCNSTNKHG 408

Query: 573 TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG 632
             + +A L VL+  P+    PL ++  A EG  + + C    +PKP+ VWKK    + +G
Sbjct: 409 YAWENAYLNVLSEPPTITDPPLLNQK-AAEGQTINLTCTVFGSPKPQVVWKKGSEQL-TG 466

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA 692
           GR K+ E+G+L I+ VS  D+G Y+C ATN      + G L+V    +  +  P  + I 
Sbjct: 467 GRYKVLEDGHLQITDVSLVDAGTYTCNATNKFDTASATGSLVVRRK-TQIQTEPLDVMIY 525

Query: 693 AHRNLQLRCSAHT--EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 750
                +  C+A T  EE+ +++  W  +G  I       +   N++     L I+     
Sbjct: 526 EGTEAKFTCTATTDPEEVNNLSIEWKKDGQLIDYALAQRVFRNNMD---NSLTISGTISL 582

Query: 751 DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK-TSATIQWTDGATNGRPIT 809
           D G+Y C+  + +    +   ++V+  P  P  V V   ++   A + W  G  N  PI 
Sbjct: 583 DTGKYTCMAVNGLDSDESSAQLVVQAVPDPPNNVWVRCYNEDRRAEVNWQPGKENYAPIL 642

Query: 810 HYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
           ++ I   T++N  TW++++ +V   E  +            L PW  Y F+++A N++G 
Sbjct: 643 NFIIQFNTSFNPDTWYDIATNVSQNERMKIVS---------LSPWGNYTFRILARNKIGQ 693

Query: 869 GEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
             PS+ + +        P + P  + G G    +L I W P+P  +QN P+  Y + W++
Sbjct: 694 SPPSAHTVEVCQVQPGTPDKNPENVIGEGDLPDNLVIFWTPMPSIEQNGPDFKYIVTWQR 753

Query: 928 KN 929
            +
Sbjct: 754 AD 755


>gi|260791168|ref|XP_002590612.1| hypothetical protein BRAFLDRAFT_83746 [Branchiostoma floridae]
 gi|229275807|gb|EEN46623.1| hypothetical protein BRAFLDRAFT_83746 [Branchiostoma floridae]
          Length = 2710

 Score =  225 bits (574), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 201/826 (24%), Positives = 343/826 (41%), Gaps = 110/826 (13%)

Query: 186 IPRGPYFIKQPTDVVFDLSKRSI---LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANL 242
           IP+ P   + P D      ++++   +N   L+C A G P   Y W K+           
Sbjct: 32  IPKDPSIFEHPQDPTVHDREKALSEGINYANLTCRAKGRPYVHYSWLKD--------GKE 83

Query: 243 IDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN-LK 301
           ID  SDK + ++GG L+I +P   +D+G+Y C A N  G+ +S     A   +G F+   
Sbjct: 84  IDAKSDK-YAIAGGYLVIYNPVYPDDQGTYQCIAYNPRGADVSMPAFFALAHVGTFDKTP 142

Query: 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQ 360
           R+P    +  G  + C  P  +P ++Y W + +  N +  ++R ++S  +G LYF     
Sbjct: 143 RSPVTVTEGRGFKLECGAPDAFPALHYGWYKGHIANRIIPNERRYISLKNGDLYFKYAIV 202

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLE 420
            DAG YS                      P SN +  +          + P     V +E
Sbjct: 203 NDAGEYS----------------------PESNIKWRRL---------DRPAREGGVEIE 231

Query: 421 CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
                               P  A F   +  L IP +   D G + C ASN + ++   
Sbjct: 232 -------------------FPSKARFNYLSHALIIPEISEADGGIFECTASNRKGSVSHE 272

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
             I +++ P+  +P + K +     +T +CEA G   + YSW+   + +      + D  
Sbjct: 273 ALIEVRSSPSPKVPFSKKPLVIGGSVTMSCEATGSEPLVYSWYFGRDKI------VTDNI 326

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           +Y +  + LT++ ++   D   Y+C   N+      +A++R+L+ KP     P+ S+   
Sbjct: 327 KYVVSTDKLTVKNMD-LNDKGSYRCIITNEQGA--GTAEIRLLS-KPPNIVIPI-SQQNG 381

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---------------------RRKIFE 639
            EG  +T+    E  P P   W K G +I +                       R  + +
Sbjct: 382 MEGSTITMTVTFEGLPVPTMEWIKQGEVIVTRTPEGVVTKTSSRYSILCIIIPVRYNVTK 441

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQ 698
            G+L+I  +S +D G YS    NV G  ++ GRL +       +   PK + +       
Sbjct: 442 KGHLVIRNLSPEDGGSYSFRIQNVLGSVDTAGRLYIAQKSRIVQGRGPKDVNMEQGSTTT 501

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNM--DLNELETPNINIDGGLLEITNAS-FADAGEY 755
           + C    + LL+    W  +G +I  +    N    P      G L I NA+     G Y
Sbjct: 502 IPCEGQIDTLLESVNSWFVDGRKIDFVKESFNYKRGPK-----GELIIKNANVMMHDGVY 556

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            C + ++V + +    V ++G    P GV+   V   +AT+++T   TNG     Y + A
Sbjct: 557 TCALDTSVDEQTATARVRIKGVSEAPVGVKFENVGSNTATLRFTQANTNGDSCKEYVVEA 616

Query: 816 RTNWNSTWFN---VSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGE 870
           +T ++  +F     ++   G       GR  + + N+  L P++ Y F+V+  N  G GE
Sbjct: 617 QTEFDDIFFTDRLWTQVWRGSPNSLRNGRGGSKLLNLNNLKPFTEYSFRVMCMNLYGMGE 676

Query: 871 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930
           PS P+ +  T    P +AP ++G G G  GD+ +SWEPL         + Y++ +R++  
Sbjct: 677 PSWPTERNRTLPGAPPRAPGKLGYGNGMAGDVLMSWEPLQESDWGDITVGYRVRYRRQGT 736

Query: 931 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +       +           P       YE K+ A N+   GPE+
Sbjct: 737 GDKYRVVYIDNPEAAAYAHTQPPAPVNVPYECKIAAYNNYSVGPEA 782



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 207/839 (24%), Positives = 342/839 (40%), Gaps = 115/839 (13%)

Query: 187  PRGPYFIKQPTD-VVFDL--SKRSILNDITLSCYAGGYPNPSYEWFKE-DYVQDRLVANL 242
            P  P   + P D  V+D   +K   +N   L+C A   P  +Y W K+   +Q       
Sbjct: 1315 PNDPSIYEHPQDPTVYDKEKAKSEGINYANLTCKAKARPWVNYAWLKDGKEIQ------- 1367

Query: 243  IDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
               +SDK +T++GG L+I +P   +D G Y C A N  G+ +S                 
Sbjct: 1368 ---ISDK-YTIAGGYLVIYNPTYPDDEGLYQCIAYNPRGADVSTP--------------- 1408

Query: 303  APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQI 361
                       A F   P     + Y W + +  N +  ++R ++S+ +G LYF      
Sbjct: 1409 -----------AWFLMTP-----LYYGWYKGHVANRIIPNERRYISHKNGDLYFKYAVVN 1452

Query: 362  DAGNYSCNVQSKVSD------TGRNGPFFPLKVF-----PHSNFQQLKFPNNFPKTFPEA 410
            DAGNY C VQ++           R+ P   + V      P S+ + +        T  E 
Sbjct: 1453 DAGNYRCFVQNQQETDFAGDLQNRSSPIITVIVNRDLNPPISDREPVIMLAPQDTTVIEG 1512

Query: 411  PKAGDKVRLECVAFGYPVPSYNWTRRGSP---------LPRNAYFENFNRILTIPNVKVE 461
              + +   LEC    YP  +  W R   P          P  A F   +  L IP +   
Sbjct: 1513 YLSAE---LECFDDAYPESNIQWKRLDRPAREGGVEIAFPSKARFNYHSHALIIPLMSAA 1569

Query: 462  DQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
            D G + C ASN + ++     I +++ P+  +P   K +     +T +CEA G   + YS
Sbjct: 1570 DGGIFQCTASNRKGSVSHEAQIEVRSVPSPKVPRASKALVFGGSVTMSCEATGSEPLVYS 1629

Query: 522  WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
            W+   + +      + D  +Y +  + LT++ ++   D   Y+C   NQ      SA+++
Sbjct: 1630 WYFKRDKI------VTDNIKYVVSTDKLTVKNMD-LGDRGGYRCIVSNQQGA--GSAEVK 1680

Query: 582  VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---------- 631
            +L   P+    P+ S+    EG  +T+       P P   W K G +I +          
Sbjct: 1681 LLAKGPNIII-PI-SQQNGMEGSTITMTVRFAGLPVPTMEWIKQGEVIATRTPEGVVETT 1738

Query: 632  GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV------LHGPSYYEQL 685
              R  +   G L+I  ++ DD+G YS    NV    ++ G L V      + GP      
Sbjct: 1739 SPRYDVTRQGYLIIKNLTPDDAGSYSFRIQNVLDSKDTAGILYVAKQSRIIRGPG----- 1793

Query: 686  PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM--DLNELETPNINIDGGLLE 743
            P  + +       + C    + LL+    W  +G +I  +    N    P      G L 
Sbjct: 1794 PTDVNMEQGGTTIIPCEGQIDSLLESVNTWFVDGRKIDFVKESFNYKRGPK-----GELI 1848

Query: 744  ITNAS-FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            I NA+     G Y C + +T  + +    V ++G    P GV+   V   +AT+++T   
Sbjct: 1849 IKNANVMMHDGVYTCALATTADEQTATGRVRIKGVSEAPVGVKFENVGSNTATLRFTQAN 1908

Query: 803  TNGRPITHYKIIARTNWNSTWFN---VSEHVIGKEVDRYTGRKEASIENV--LVPWSTYE 857
            TNG     Y + A+T ++  +F     ++   G      + R  A + N+  L P++ Y 
Sbjct: 1909 TNGDSCKEYVVEAQTEFDDIFFTDRLWTQVWRGSPSALRSSRGGAKLLNLNNLKPYTEYS 1968

Query: 858  FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            F+V+  N  G GEPS P+ +  T    P +AP ++G G G  GD+ +SWEPL        
Sbjct: 1969 FRVMCLNTYGMGEPSWPTEKNRTLPGAPPRAPRKLGYGNGMAGDVLMSWEPLEESDWGDY 2028

Query: 918  NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
             + Y++ +R++   +       +           P       YE K+ A N+   GPE+
Sbjct: 2029 TVGYRVRYRRQGTGDKYRVVYIDNPEAAAYAHTQPPAPVNVPYECKIAAYNNYSVGPEA 2087



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 128/372 (34%), Gaps = 62/372 (16%)

Query: 430  SYNWTRRGSPLPRNAYFENFNR-----ILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            S  W   G PLP N  +  +        L I  V  ++QG Y C     R   + S+   
Sbjct: 1265 SIRWLYEGVPLPNNDSYRQYTEGGDINSLFIAEVNTQNQGCYTCEEWRGRPN-DPSIYEH 1323

Query: 485  IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
             Q    +          N A+LT  C+A   P V Y+W ++G+        ++  D+Y I
Sbjct: 1324 PQDPTVYDKEKAKSEGINYANLT--CKAKARPWVNYAWLKDGK-------EIQISDKYTI 1374

Query: 545  QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
                L I       D  +YQC A N      S+    ++T        PL    Y G   
Sbjct: 1375 AGGYLVIYNPTYPDDEGLYQCIAYNPRGADVSTPAWFLMT--------PLYYGWYKGHVA 1426

Query: 605  NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            N                      II +  R    +NG+L       +D+G Y C   N  
Sbjct: 1427 N---------------------RIIPNERRYISHKNGDLYFKYAVVNDAGNYRCFVQNQQ 1465

Query: 665  GMD-----ESKGRLIV-------LHGPSYYEQ----LPPKIT--IAAHRNLQLRCSAHTE 706
              D     +++   I+       L+ P    +    L P+ T  I  + + +L C     
Sbjct: 1466 ETDFAGDLQNRSSPIITVIVNRDLNPPISDREPVIMLAPQDTTVIEGYLSAELECFDDAY 1525

Query: 707  ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
               ++ +       R G +++        N     L I   S AD G ++C   +  G +
Sbjct: 1526 PESNIQWKRLDRPAREGGVEIAFPSKARFNYHSHALIIPLMSAADGGIFQCTASNRKGSV 1585

Query: 767  STKTTVIVEGPP 778
            S +  + V   P
Sbjct: 1586 SHEAQIEVRSVP 1597



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 130/367 (35%), Gaps = 43/367 (11%)

Query: 182  NPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
            NP    R P  +  P D        S      L C+   YP  + +W + D         
Sbjct: 1490 NPPISDREPVIMLAPQDTTVIEGYLSA----ELECFDDAYPESNIQWKRLDRPAREGGVE 1545

Query: 242  LIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            +  P S  RF      LII       D G + C ASN+ GS +S   Q+    +    + 
Sbjct: 1546 IAFP-SKARFNYHSHALII-PLMSAADGGIFQCTASNRKGS-VSHEAQIEVRSVPSPKVP 1602

Query: 302  RAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQ 360
            RA +         M C+   + P V ++Y+ RD     V ++ +  VS D  L    ++ 
Sbjct: 1603 RASKALVFGGSVTMSCEATGSEPLVYSWYFKRD---KIVTDNIKYVVSTD-KLTVKNMDL 1658

Query: 361  IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLE 420
             D G Y C V ++     +      +K+         K PN       +    G  + + 
Sbjct: 1659 GDRGGYRCIVSNQ-----QGAGSAEVKLL-------AKGPNIIIPISQQNGMEGSTITMT 1706

Query: 421  CVAFGYPVPSYNWTRRGSPL-------------PRNAYFENFNRILTIPNVKVEDQGEYI 467
                G PVP+  W ++G  +             PR  Y       L I N+  +D G Y 
Sbjct: 1707 VRFAGLPVPTMEWIKQGEVIATRTPEGVVETTSPR--YDVTRQGYLIIKNLTPDDAGSYS 1764

Query: 468  CRASN--DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF--GVPDVTYSWF 523
             R  N  D       + ++ Q+        TD +M+        CE     + +   +WF
Sbjct: 1765 FRIQNVLDSKDTAGILYVAKQSRIIRGPGPTDVNMEQGGTTIIPCEGQIDSLLESVNTWF 1824

Query: 524  RNGELLN 530
             +G  ++
Sbjct: 1825 VDGRKID 1831


>gi|148223934|ref|NP_001085487.1| neuronal cell adhesion molecule precursor [Xenopus laevis]
 gi|49117906|gb|AAH72835.1| MGC80200 protein [Xenopus laevis]
          Length = 1177

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 215/826 (26%), Positives = 341/826 (41%), Gaps = 77/826 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++    I + C A G P PS+ W +             D  
Sbjct: 28  PLDLLQPPTITHQSPKNYIVDPRESIVIQCEAKGKPPPSFSWTRN--------GTHFDID 79

Query: 247 SDKRFTL--SGGNLIIND---PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK 301
            D   T+  + G L+IN     R     G Y C A N  GS +S ++ +       +  +
Sbjct: 80  KDPYVTMKPNSGTLVINTMNGARVDAYEGEYQCTARNDRGSALSNNIVIRQSRSPLWTKE 139

Query: 302 R-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQ 360
           +  P +  Q     + C+PP   P    +W  + F     ++KRV    +G LYFS ++ 
Sbjct: 140 KIEPIVLQQGVPLVLPCNPPKGLPPPIIFWMDNSFQKL-PQNKRVSQGLNGDLYFSNVQP 198

Query: 361 IDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK--- 416
            D  + Y C  +  ++ T        LKV       +    N     F     AG++   
Sbjct: 199 EDTRDFYICYARFNLTQTIHQKQPISLKVLTMDGLNETIAANLSDTEFYGDSPAGERRPS 258

Query: 417 ------------------VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPN 457
                             + LEC+A G P P  +W +  + LP    ++ENFN+ L I +
Sbjct: 259 MLFPNMTASNKTVLLGEVLLLECIAEGLPTPEIHWRKESADLPAGRVFYENFNKTLRIID 318

Query: 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
           V   D G+Y C   N        +T+++++ P +  P T+  +    D +  C A G P 
Sbjct: 319 VTEADAGKYKCIGRNILGTTHHIITVNVKSSPYWISPPTNIVLSPGEDGSLICRASGNPT 378

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            + +W  NG  ++ E  P  D  R    D ++  +  +     A+YQC   N+     ++
Sbjct: 379 PSITWLING--VSIELAPT-DASRRVDGDTIIFSKVQDGAT--AVYQCNVSNKYGYLLAN 433

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKK--DGNIIGSGGR 634
           A + VL   P      +    Y     NV +  C    +PKP+  W K   G+I+   G 
Sbjct: 434 AFVNVLAEPPRIM---VLKHVYKVIANNVALLHCPFFGSPKPEIKWFKGVHGSILHGNGY 490

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
               +NG L I    +D SG Y+C ATN  G  +    L +   P+   + P    I  +
Sbjct: 491 V-FHDNGTLEIPVAQKDSSGNYTCVATNTFGSVKDMIGLQI-KDPTMIIKQPEYRVIQRY 548

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
            +    C    +  L    +W  +       D   L      +  G L I N +  D G 
Sbjct: 549 GSAHFECRVKHDPTLKPVVLWLKD-------DSELLNDERFKMTKGHLTIKNVTEKDEGT 601

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI- 813
           Y CV  + +  +S    + V   P  P  +++ + H+ S  + W  G  N  PIT++ I 
Sbjct: 602 YTCVANTDLDTVSASAVLTVVDRPNHPFDLELTDHHERSVQLSWVPGDDNNSPITNFMIE 661

Query: 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
                 +   ++    V G +         A++   L P+  Y F+VIA NE+G  +PS 
Sbjct: 662 YEDAMHDPGIWHFQAKVSGTQT-------TATLS--LSPFVNYSFRVIAVNEIGSSDPSE 712

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTE 932
            S QY T   +P + PS I G G +  +L I+WEP+     N P + YK+ WR+K+ D E
Sbjct: 713 SSEQYMTKPAEPDKNPSGIKGVGTEPDNLVIAWEPIKGFDSNGPGLQYKVSWRQKDFDDE 772

Query: 933 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + S  +    NV   +V     F    YE+KVQA+ND+G  P+  V
Sbjct: 773 WTSIIV---ANVSKYIVSGTPTF--EPYEIKVQALNDIGYAPDPSV 813


>gi|47224417|emb|CAG08667.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1301

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 213/843 (25%), Positives = 354/843 (41%), Gaps = 89/843 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +    SK  I++   +I + C A G P+PS+ W +     D      ID  
Sbjct: 20  PLDLPQPPTITHQSSKDYIIDPRENIIIHCEAKGKPHPSFSWTRNGTHFD------IDKD 73

Query: 247 SDKRFTLSGGNLIINDPRQVEDR--GSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-A 303
            +       G L+++  R   ++    Y C A NK G+ +S ++ +       ++ ++  
Sbjct: 74  PNVIMRPHSGTLVVDISRVKAEQYECVYQCTARNKHGTAVSNNIVVRQSRSPLWSKEKIK 133

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
           P +  +     + C PP   P    +W  + F   + +  RV  S +G LYFS + + D+
Sbjct: 134 PMVVQEGVSLVLPCRPPAGLPPPIIFWMDNNF-QRLPQSSRVSQSLNGDLYFSNVLREDS 192

Query: 364 GN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQ-LKFPNNFPKTFPEAPKA-------- 413
            N Y C  +   + T +      +KVF        +    N    F EAP          
Sbjct: 193 RNDYICYARFPYTQTIQQKQPITVKVFTMDAINDTMAALYNDTDLFSEAPAEERKPSFLI 252

Query: 414 ------------GDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFENFNRILTIPNVKV 460
                       G  + +EC+A G P P  +W++    LP +   F+++ + L I NV  
Sbjct: 253 PSGPSSSKTVLRGHVLEMECIAEGLPTPEISWSKVSGDLPAKRTSFQHYQKTLRIVNVSE 312

Query: 461 EDQGEYICRASNDRSALESSVTISIQAEPN-FTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
            D GEY C A N   ++  ++ ++++A P   + P  +  +        TC A G P  +
Sbjct: 313 SDAGEYRCLARNQLGSVHHTILVTVKAAPYWLSGPSQNLVLAPGESGVLTCRASGTPKPS 372

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579
            +W  NG  ++ E  P +   +  ++D+ +    +      A+YQC   N      S+A 
Sbjct: 373 ITWAMNG--ISIENAPADPSRK--VEDDTIIFTDVQTGSS-AVYQCNVSNDYGYLLSNAF 427

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF- 638
           + VL+  P     P        +     I C    +P PK  W KD       G   I  
Sbjct: 428 VNVLSEPPRVLT-PANKVYQVIKNQRALIDCASFGSPIPKITWFKDSRSSTLDGHPYIIH 486

Query: 639 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
           +NG L +      +SG Y+C A N  G+ E+   L V   P+   + P    +   R++ 
Sbjct: 487 DNGTLEMHTAQAHNSGKYTCVARNSLGIYENHVYLEVKE-PTRILKQPEYKVVRRGRSVV 545

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
             C    +  L     W  +   + + D        I ++   L IT+ +  DAG Y C+
Sbjct: 546 FECKVKHDPTLIPTITWLKDAGELPDDD------ERIILESDSLTITDVTENDAGVYTCI 599

Query: 759 VKSTVGKIS----------TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
             +T+ + S          T T  +V   P  P  +++ +  K S  + WT G  +  PI
Sbjct: 600 TNTTLDQDSASAELTVVEATPTPAVVYEQPDPPTDLELTDQKKRSVQLTWTPGDEHNSPI 659

Query: 809 THYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
             + I    + +    W N++E V G +   +           L P+  Y F+V+A N +
Sbjct: 660 QKFLIQFEDSLHHRGHWHNLTE-VPGTKTTAHLK---------LSPYVHYTFRVLALNAV 709

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW----------EPLPREKQNA 916
           G+  PS PS  + T A  P Q P+ + G G +  +L ISW          +PL   + N 
Sbjct: 710 GFSRPSFPSRMFKTEAAAPDQNPTGVQGFGTEHNNLVISWKRTGTNELLSQPLSGLEANG 769

Query: 917 PNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           P ++YK+ WR+K+ D+E+ S T+    N    V   P+   +  YE+KVQA+ND G GPE
Sbjct: 770 PGLHYKVMWRQKDLDSEWTSVTVA--NNSKFIVSGTPT---FVPYELKVQAVNDYGAGPE 824

Query: 976 SEV 978
            +V
Sbjct: 825 PDV 827


>gi|339238857|ref|XP_003380983.1| putative fibronectin type III domain protein [Trichinella spiralis]
 gi|316976074|gb|EFV59418.1| putative fibronectin type III domain protein [Trichinella spiralis]
          Length = 1127

 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 205/756 (27%), Positives = 335/756 (44%), Gaps = 90/756 (11%)

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE-IGNQNWGKAMFCDPPTNY 323
           QV+D+G Y C  SN +G  +S   ++  G +  F+ +   + I  +     + C+ P   
Sbjct: 33  QVDDQGYYQCSVSNIYGVAMSHIFEVKTGVLNYFDRRPVKDVIVEEGQPLTLECNKPYGV 92

Query: 324 PGVNYYWA-RDYFPNFVEED---KRVFVSYDGALYFSALEQIDAGNY---SCNVQSKV-S 375
           P    +W  RD   ++  +    + + +  DG L FS ++  D+  Y    C   S V  
Sbjct: 93  PSPTIFWLYRDLKKSYAMDTIHREHITIDGDGNLQFSFVKSSDSDEYRIYQCAATSPVLH 152

Query: 376 DTGRNGPFFPLKVFPH----SNFQQL-KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS 430
           D  R G  F L V P     ++ ++L   P N         +AG+ + L C+  G P+PS
Sbjct: 153 DEYRAGDEFRLLVSPTEKKTASIKKLWTSPTNI------VLQAGNDLHLTCIFSGRPLPS 206

Query: 431 YNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
            +W+++ + LP N    +NF + L I +V   D+G YIC A+     +   + + I   P
Sbjct: 207 IHWSKKDAQLPTNRIAHKNFGKTLIIKSVISSDKGTYICDAN---GLVRHEMHVEILNAP 263

Query: 490 NFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN- 547
            +   P  D ++  +++    C+ FG P     WF NG+ +        +  R  +  N 
Sbjct: 264 QWVDGPPADLNVAEESNAELHCKVFGDPQPIVRWFINGQPITD----FSENSRRLLSSNG 319

Query: 548 -VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGN 605
            +L I  LN + D A+YQC A N L   +++A + V    P F     E E      G +
Sbjct: 320 EILKIVNLNHDVDTAVYQCNASNPLGYIFANAFINVYAHAPRFTTE--EDEIVPTILGQD 377

Query: 606 VTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
           V + C+ EAAPKP+  W   K+  I  S  R  I  N  L IS V+  D+G+Y C   N 
Sbjct: 378 VDLDCSVEAAPKPEVKWMDNKEREIKDSRPRFHILSNHTLRISAVTAKDAGLYFCHVNNK 437

Query: 664 HGMDESKGRLIVLHG----PSYY----------------EQLPPKITIAAHRNLQLRCSA 703
           +G++ +K +L V       P+++                E  P K  I A+    L C A
Sbjct: 438 YGLNRAKRKLEVYSMFQPFPTFHKFKAILSLIEATQFLVELKPAKAIIDANSKFNLFCEA 497

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLN--ELETPNINIDGGLLEITNASFADAGEYECVVKS 761
             ++ L++ Y+W  + + + N   N   ++ PN       LEI       +G Y CV K+
Sbjct: 498 KADDRLEIEYLWYRDQILLNNASDNAYRIDIPN------KLEIVKPRGRHSGIYTCVSKT 551

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN- 820
            V  + +K  +IV+  P  P  + + + ++  A ++W     N  PIT Y +   T ++ 
Sbjct: 552 KVDTLKSKMQLIVKDVPESPKLLSI-DCNERRALVRWAAAYDNHEPITKYTVEYETAFHK 610

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
           + W      +  ++ D+ T   EA I   L PW  Y F+VIA N+ G G P        T
Sbjct: 611 NVWIPA---LTEEQTDQKTF--EAVIN--LSPWVNYTFRVIASNKRGAGTPGYLKATCQT 663

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND----TEFQSE 936
           P   PY  P  +   G +  +L     P+ +E+ N     Y I +R         EF+ E
Sbjct: 664 PPSYPYTNPKNVSAAGTEKDNL-----PMSKEECNGERFRYLIRYRLDEPGTSWEEFEVE 718

Query: 937 T-LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
             L+++       V I  +  + +Y V+VQA+N +G
Sbjct: 719 DPLQDH-------VVIRDQPTFRKYVVQVQAVNAIG 747



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 153/419 (36%), Gaps = 68/419 (16%)

Query: 196 PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSG 255
           PT++V         ND+ L+C   G P PS  W K+D    +L  N I   + K F   G
Sbjct: 182 PTNIVLQAG-----NDLHLTCIFSGRPLPSIHWSKKD---AQLPTNRI---AHKNF---G 227

Query: 256 GNLIINDPRQVEDRGSYHCKAS----NKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW 311
             LII       D+G+Y C A+    ++    I  + Q   G   + N+    E  N   
Sbjct: 228 KTLIIKSVIS-SDKGTYICDANGLVRHEMHVEILNAPQWVDGPPADLNVA---EESNAEL 283

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQ-IDAGNYSCNV 370
              +F DP    P V ++       +F E  +R+  S    L    L   +D   Y CN 
Sbjct: 284 HCKVFGDP---QPIVRWFINGQPITDFSENSRRLLSSNGEILKIVNLNHDVDTAVYQCNA 340

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPS 430
            + +     N     + V+ H+     +F     +  P     G  V L+C     P P 
Sbjct: 341 SNPLGYIFANA---FINVYAHAP----RFTTEEDEIVPTI--LGQDVDLDCSVEAAPKPE 391

Query: 431 YNWT---RRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASN----DRSALESSVTI 483
             W     R     R  +    N  L I  V  +D G Y C  +N    +R+  +  V  
Sbjct: 392 VKWMDNKEREIKDSRPRFHILSNHTLRISAVTAKDAGLYFCHVNNKYGLNRAKRKLEVYS 451

Query: 484 SIQAEPNF-----TIPLTDKH------------MDNQADLTWTCEAFGVP--DVTYSWFR 524
             Q  P F      + L +              +D  +     CEA      ++ Y W+R
Sbjct: 452 MFQPFPTFHKFKAILSLIEATQFLVELKPAKAIIDANSKFNLFCEAKADDRLEIEYLWYR 511

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRYSSAQLRV 582
           +  LLN+ +      D  +  D    +  + P  R   +Y C +K ++ T  S  QL V
Sbjct: 512 DQILLNNAS------DNAYRIDIPNKLEIVKPRGRHSGIYTCVSKTKVDTLKSKMQLIV 564



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 130/330 (39%), Gaps = 25/330 (7%)

Query: 453 LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF--TIPLTDKHMDNQADLTWTC 510
           +T  + +V+DQG Y C  SN      S +        N+    P+ D  ++    LT  C
Sbjct: 27  ITFLHPQVDDQGYYQCSVSNIYGVAMSHIFEVKTGVLNYFDRRPVKDVIVEEGQPLTLEC 86

Query: 511 -EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPA--MYQCR 566
            + +GVP  T  W    +L  S  +    ++   I  D  L   ++         +YQC 
Sbjct: 87  NKPYGVPSPTIFWLYR-DLKKSYAMDTIHREHITIDGDGNLQFSFVKSSDSDEYRIYQCA 145

Query: 567 AKNQ-LKTRYSSAQLRVLTLKPSFKKRPLESETYAG-------EGGNVTIFCNPEAAPKP 618
           A +  L   Y +     L + P+ KK     + +          G ++ + C     P P
Sbjct: 146 ATSPVLHDEYRAGDEFRLLVSPTEKKTASIKKLWTSPTNIVLQAGNDLHLTCIFSGRPLP 205

Query: 619 KFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677
              W KKD  +  +    K F    L+I  V   D G Y C A   +G+   +  + +L+
Sbjct: 206 SIHWSKKDAQLPTNRIAHKNF-GKTLIIKSVISSDKGTYICDA---NGLVRHEMHVEILN 261

Query: 678 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 737
            P + +  P  + +A   N +L C    +    V   W  NG  I   D +E     ++ 
Sbjct: 262 APQWVDGPPADLNVAEESNAELHCKVFGDPQPIVR--WFINGQPI--TDFSENSRRLLSS 317

Query: 738 DGGLLEITNASF-ADAGEYECVVKSTVGKI 766
           +G +L+I N +   D   Y+C   + +G I
Sbjct: 318 NGEILKIVNLNHDVDTAVYQCNASNPLGYI 347


>gi|2275260|gb|AAC47654.1| tractin [Hirudo medicinalis]
          Length = 1880

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 205/784 (26%), Positives = 341/784 (43%), Gaps = 51/784 (6%)

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
           + ++ + C A G P   ++WFK+    ++  A    P  D+     G   + N+  +++D
Sbjct: 48  MEEVEIPCEATGTPPLVFQWFKDGEPLEKSEAER--PFKDED---QGTITLYNN--ELKD 100

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGK--AMFCDPPTNYPGV 326
            G Y C   NK+G+  S    L       F   + P+I N   G    + C+PP +YP  
Sbjct: 101 EGYYQCIVKNKYGTAASVKTLLKMAVQESFPTVKEPQIVNVRVGDNLTLRCNPPKSYPTP 160

Query: 327 NYYWAR-----DYFPNFVEEDKRVFVSYDGALYFSALEQID---AGNYSCNVQSKVSDTG 378
           + YW          P  +E   R  + Y+G  +F+ + + D      Y C   +    + 
Sbjct: 161 DVYWGTVKKGAKLLP--LENTMRYNLDYEGNFHFANVMEEDHREGAYYLCISHNNAMRSS 218

Query: 379 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWTRR 436
             G    +++   S     K       T P    A  G   +L+C+  GYP P+ +W++R
Sbjct: 219 VQGNDCIIRINGSSKDGVRKHAPGVMWTSPRKDLALTGQSKKLKCIFSGYPTPNVSWSKR 278

Query: 437 GSPLP-RNAYFENFNRILTIPNVKVEDQGEYICRASND-RSALESSVTISIQAEPNF--T 492
           GS  P +          L I NV+V D G Y C  S+    A+   + +++++ P +   
Sbjct: 279 GSDFPPKIVVSSELPHELEIRNVEVGDAGTYRCTGSSTYGKAVFVDIELTVESMPRWKDN 338

Query: 493 IPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR 552
            P  D +  ++    + C   G+P  T  W  N   L  E LP   + R   +  VLT  
Sbjct: 339 KPPEDVNTSDEETAVFKCGVEGIPRPTVEWMLNKRPL--EDLPPNPRMRMNDERTVLTFS 396

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            ++  +D  + QC A N      ++A L V    PSF+  P+ S     EG N  + C+ 
Sbjct: 397 NVS-SKDIQVIQCNASNVHGYILANAYLNVFAEPPSFQDLPV-SPMKLTEGKNTVVQCSV 454

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
             APKP     ++  +I SG R K+  +GNLL+S +   DSG Y C A+N  G D     
Sbjct: 455 FGAPKPLVTCLRNDTVI-SGDRFKVDTHGNLLVSNLQLSDSGNYICFASNKFGNDSVGAN 513

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT--EELLDVAYIWTHNGVRIGNMDLNEL 730
           LIV    +   + P          + L C+A T  EE   ++  W  +G  I      E 
Sbjct: 514 LIVRRR-TEISRPPSDHVTTVGSEVVLHCNATTDPEEKNSLSVKWLKDGEPI----TFEG 568

Query: 731 ETPNI-NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 789
            +P + +     L I      ++G Y C+  + +   +    ++V+G P  P  V+++  
Sbjct: 569 SSPGVFDFRDNSLTIKKVEVKESGTYVCIASTDLDSDNITVELVVKGVPDPPENVEILRC 628

Query: 790 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVDRYTGRKEASIEN 848
           +K+ A I+WT G  N  PIT + +   T+ +    ++ +EH++       + +  AS   
Sbjct: 629 NKSMAVIEWTPGFDNHDPITGHYVYCNTSRDEPGVYHRNEHLVP------SSKSSASFH- 681

Query: 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWE 907
            L PW+ Y F V A N +G   PS  +  + +TPA  P   P ++     + G L I+WE
Sbjct: 682 -LRPWNNYTFHVKAINNIGMSGPSKFTTDFCSTPAHYPTMNPEKVCTESREPGQLVITWE 740

Query: 908 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
           P+     N P  +Y + +R  +  E   E ++   +     + I  +  + E+E+ VQA 
Sbjct: 741 PMGSNDLNGPGFHYLVGFRLVDQDE---ELVRAVHDWQTKELVIEGQDVFKEFEIYVQAA 797

Query: 968 NDVG 971
           N VG
Sbjct: 798 NQVG 801


>gi|348575283|ref|XP_003473419.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
           [Cavia porcellus]
          Length = 1152

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 224/869 (25%), Positives = 354/869 (40%), Gaps = 116/869 (13%)

Query: 180 IENPDKIPRGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           IE P  +P+ P   KQ    V F   +        + C A G P P + W K+D   D  
Sbjct: 25  IEIPLSVPQVPTITKQSKVQVAFPFDEY-----FQIECEAKGNPEPVFSWTKDDKPFDLS 79

Query: 239 VANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF 298
            A +I   +   F       I N+      +G Y C ASNK G  +SE ++     + +F
Sbjct: 80  GAPIIASNNSGTFK------IPNEGHISHFQGKYRCFASNKLGVAMSEEIEFIVPSVPKF 133

Query: 299 NLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSA 357
             ++   +  +     +  C+PP   P ++ YW        +E+DKRV++S  G LYF+ 
Sbjct: 134 PKEKIEPLDVEEGDPIVLQCNPPKGLPPLHIYWMNIEL-EHIEQDKRVYMSQKGDLYFAN 192

Query: 358 LEQIDAGN-YSC--------------------NVQSKVSDTGRNGPFFPLKVFPHSNFQQ 396
           +E+ D+ N Y C                    N    V+D+  +      ++   +N  +
Sbjct: 193 VEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHVNDSRSS-----TEISSKANSIK 247

Query: 397 LKFPNNF---PKTFPEAPKA---GDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFENF 449
            + P      P+T  E+      G+ + LEC A G P P   W + G  LP R+   EN 
Sbjct: 248 QRKPRLLLPPPETGSESAVVILKGETLMLECFAEGLPTPQVEWNKLGDDLPKRSETKENH 307

Query: 450 NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWT 509
              L I N+   D+G Y C ASN          + ++  P +T           +     
Sbjct: 308 GNTLKIENISHRDKGNYRCTASNFLGTASHDFHVIVEEPPRWTKKPESAVYSTGSSGILL 367

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV----LTIRYLNPERDPAMYQC 565
           CEA GVP  T  W  NG        P ++    F  D V    ++   L+P    A+YQC
Sbjct: 368 CEADGVPQPTIQWKING-------FPADNH--LFAGDVVFPREISFTNLHPNHT-AVYQC 417

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNPEAAPKPKFVWKK 624
            A N   T  ++A + V+ + P  + +  + E YA   G +  + C   A+P+    W++
Sbjct: 418 EASNVHGTILANANIDVIDVIPLIQTK--DEENYATVIGHSAFLHCEYFASPEAVVTWQR 475

Query: 625 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
            D      GGR +I  NG L I+  + +D+G YSC   N  G       L + +  +   
Sbjct: 476 MDEAQPLEGGRYRIHNNGTLEITRTTEEDAGSYSCWVENAIGKTAVIANLDIRNA-TKLR 534

Query: 684 QLPPKITIAAHRNLQL----RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 739
             P    ++    L+L    +C +H +  L ++  W+ +G    + ++N  E   I IDG
Sbjct: 535 VSPKNPRVSKSHMLELYCESKCDSHLQHSLKLS--WSKDG---EDFEINGTEDGRIVIDG 589

Query: 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
             L I+N +  D G Y C+  + +  I+  T V V   P  P  + + E H  S  + W 
Sbjct: 590 ANLTISNVTLEDHGIYSCLAHTALDSIAEITQVTVLDVPDPPENLHLSERHNRSVRLSWE 649

Query: 800 DGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
            G  +   IT Y +    N      W         +E+ R  G K  ++   L P+  Y+
Sbjct: 650 AGDDHNSNITEYIVEFEGNREDPGRW---------EELTRVQG-KATTVLLRLAPYVRYQ 699

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE---------- 907
           F+VIA NE+G   PS PS  + TP   P + P  I     +  ++ I WE          
Sbjct: 700 FRVIAVNEVGKSRPSQPSVHHQTPPAAPDKNPQNIRVQASQPKEMIIKWEVHPDTAPVVV 759

Query: 908 ---------------PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-- 950
                           +P+++ +     Y+I W K           KE   +  +  R  
Sbjct: 760 SVDIINSTLVKVTWSTIPKDRVHGHLKGYQINWWKTKSLLDGRIHPKEVNILRFSGQRNY 819

Query: 951 --IPSEFYYTEYEVKVQAINDVGPGPESE 977
             +PS   ++E+ + V A N  G GPESE
Sbjct: 820 GMVPSLDAFSEFHLTVLAYNSKGAGPESE 848


>gi|165993291|emb|CAP71957.1| nadl1.2 [Danio rerio]
          Length = 1145

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 199/782 (25%), Positives = 345/782 (44%), Gaps = 54/782 (6%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGN----LIINDPRQ 265
           +DITL+C A G P P++ W K D V+        DP  D   ++S  +    L   D   
Sbjct: 67  DDITLTCDATGNPPPTFRWVK-DGVE-------FDPSKDPDLSVSRDSGTFSLTAKDGPI 118

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPT 321
            + +G Y+C ASN+ G+ +S   ++          E  + +  E G       + C+PP 
Sbjct: 119 HQYQGRYNCYASNELGTAVSNEARIVTENTPTLQKEKIITKKVEEGE---SVVLPCNPPN 175

Query: 322 NYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRN 380
                  +W  D     +++++RV    DG LYFS     D+  +Y+CN+Q   +   + 
Sbjct: 176 GTVAPVIHWM-DKKLRHIQQNERVIQGRDGNLYFSHATVADSRDDYTCNIQFPSARVIKL 234

Query: 381 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP---KAGDKVRLECVAFGYPVPSYNWTRRG 437
                L V   ++  + + P     T P +     +G  + LEC+  G P PS  W R+ 
Sbjct: 235 KEPIKLTVSSSNSVVRNRRPQMMRPTGPSSSYLVLSGQNLELECIVQGLPSPSIQWIRKD 294

Query: 438 SPLPRNAYFENFN-RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             L  +   ++ N R+L   N+   D GEY C A+N +     +  ++++A P +     
Sbjct: 295 GVLSESRTTKDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAPYWIKEPK 354

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
            +       +   C+A G+P    +W  NG LL+     ++   R  ++  VLT++ +  
Sbjct: 355 SQLYAPGETVKLECKADGIPKPEVTWSINGILLSD----IDPDPRRSVKHGVLTLKNVE- 409

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNVTIFCNPEAA 615
             D A++QC+A ++  +   +A + V+ L P       +   Y+  EG    + C    +
Sbjct: 410 LSDTAVFQCKAASKHGSVLINAYVYVIELPPQILTE--DGLMYSVAEGQTTELACETFGS 467

Query: 616 PKPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+P   W+ +        +R I   +G+L IS  S +DSG Y+CT  N          L 
Sbjct: 468 PRPNVTWEGESWGALVANQRMIQLSDGSLQISNASLNDSGQYTCTVNN--SKITITAELD 525

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETP 733
           VL+  +   + P  + I   +   L C    +   D+  + W  N  ++        ++ 
Sbjct: 526 VLNK-TVIVKPPLALRIQRGKPATLTCEYQVDSRQDLPQVQWRKNTQKLTESS----DSD 580

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 793
              ID   L I      D G Y C V +T+       ++ +   P  P  +Q+ E  +  
Sbjct: 581 KYMIDESTLIIPEVEEEDEGTYTCEVITTLDMAKASGSITIVDRPDPPSLIQMTEPKERR 640

Query: 794 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
            T+ WT GA +  P+  Y I     +  T  +  E    +E+ R +G  + +    L P+
Sbjct: 641 VTLSWTPGADHNSPVLEYLI----EFEETGSDRKEW---EELSRVSGSSQRATLP-LKPF 692

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
            +Y F+VIA NE+G  +PS  +  Y+TPA  P   P  +     + G L I+W+ + R  
Sbjct: 693 ISYHFRVIAINEIGKSDPSMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRRS 752

Query: 914 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            N P+ +YK+ WRK   +     T K+  +    V  + +   ++ +++KVQA+N++G G
Sbjct: 753 FNGPDFHYKVMWRKVLGSGPSWHT-KDITSPPFVVTDVGN---FSAFDIKVQAVNEMGEG 808

Query: 974 PE 975
           PE
Sbjct: 809 PE 810



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 150/386 (38%), Gaps = 26/386 (6%)

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFENFNRILTIPNVKVED------QGE 465
           + D + L C A G P P++ W + G    P      + +R     ++  +D      QG 
Sbjct: 65  SADDITLTCDATGNPPPTFRWVKDGVEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQGR 124

Query: 466 YICRASNDR-SALESSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCE-AFGVPDVTYSW 522
           Y C ASN+  +A+ +   I  +  P      +  K ++    +   C    G       W
Sbjct: 125 YNCYASNELGTAVSNEARIVTENTPTLQKEKIITKKVEEGESVVLPCNPPNGTVAPVIHW 184

Query: 523 ----FRNGELLNSETLPLEDQDRYFIQDNVLTIR--YLNPERDPAMYQCRAKNQLKTRYS 576
                R+ +  N   +   D + YF    V   R  Y    + P+    + K  +K   S
Sbjct: 185 MDKKLRHIQ-QNERVIQGRDGNLYFSHATVADSRDDYTCNIQFPSARVIKLKEPIKLTVS 243

Query: 577 SAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR 635
           S+   V   +P   +    S +Y    G N+ + C  +  P P   W +   ++      
Sbjct: 244 SSNSVVRNRRPQMMRPTGPSSSYLVLSGQNLELECIVQGLPSPSIQWIRKDGVLSESRTT 303

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           K   +  L    +S  D G Y CTATN  GM     R+ V   P Y+ + P     A   
Sbjct: 304 KDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAP-YWIKEPKSQLYAPGE 362

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
            ++L C A      +V   W+ NG+ + ++D +    P  ++  G+L + N   +D   +
Sbjct: 363 TVKLECKADGIPKPEVT--WSINGILLSDIDPD----PRRSVKHGVLTLKNVELSDTAVF 416

Query: 756 ECVVKSTVGKISTKTTV-IVEGPPGL 780
           +C   S  G +     V ++E PP +
Sbjct: 417 QCKAASKHGSVLINAYVYVIELPPQI 442


>gi|449481128|ref|XP_002195594.2| PREDICTED: neuronal cell adhesion molecule [Taeniopygia guttata]
          Length = 1284

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 221/820 (26%), Positives = 354/820 (43%), Gaps = 78/820 (9%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP  +     K  I++   +I + C A G P PS+ W +     D      ID  +  
Sbjct: 37  LSQPPTITQQSPKDYIVDPRENIVIQCEAKGKPPPSFSWTRNGTHFD------IDKDAQV 90

Query: 250 RFTLSGGNL---IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APE 305
               + G L   I+N  +     G Y C A N+ G+ IS ++ +       +  ++  P 
Sbjct: 91  TMKPNSGTLVVNIMNGGKAEAYEGIYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPN 150

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-G 364
              +     + C PP   P    +W  + F   + + +RV    +G LYFS ++  D   
Sbjct: 151 HVREGDSLVLHCRPPVGLPPPIIFWMDNAF-QRLPQSERVSQGLNGDLYFSNVQPEDTRE 209

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQ-LKFPNNFPKTFPEAPKAGDKVRLE 420
           +Y C  +   + T +      +KVF   P +  Q  L  P     T  E    G+ + LE
Sbjct: 210 DYICYARFNHTQTIQQKQPISVKVFSTKPVTERQPVLLTPTGSTSTKVEL--RGNVLLLE 267

Query: 421 CVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           C+A G P P   W + G  LP N  +FENF + L I +V   D G Y C A N   ++  
Sbjct: 268 CIAAGLPTPVIRWIKEGGELPANRTFFENFKKTLKIIDVSEADSGNYKCIARNTLGSVHH 327

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
            ++++++A P +     +  +    D T  C A G P  + SW  NG  +    +  ED 
Sbjct: 328 VISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPSISWLANGVPI---AIAPEDP 384

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT-----LKPSFKKRPL 594
            R    D ++  +    ER  A+YQC A N+     ++A + VL      L P+ K   +
Sbjct: 385 SRKVDGDTIIFSQVQ--ERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTPANKLYQV 442

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDD 652
            +++ A       + C    +PKP+  W K   G+I+  G      +NG L I    ++ 
Sbjct: 443 IADSPA------LLDCAYFGSPKPEIEWFKGVKGSIL-RGNEYVFHDNGTLEIPVAQKNS 495

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G  +++ +L +   P+   + P    I  +  +   C    +  L   
Sbjct: 496 AGTYTCVARNELGKIQNEVQLEI-KDPTMIIKQPEYKVIQRYGQVSFECIIKHDSTLLPT 554

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
             W  N     N +L + E   +  D   L I N +  D G Y C+V +T+  +S    +
Sbjct: 555 VTWLKN-----NDELPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVL 607

Query: 773 IVEGPPGLPG----------GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-- 820
            V   P  P            +++    + S  + W  G  N  PI ++ I      +  
Sbjct: 608 TVVAAPPTPAIIYARPNPPFDLELTGQLERSIDLSWIPGDENNSPIINFVIEYEDALHEP 667

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
             W   +E V G +          + +  L P+  Y F+VIA N++G  +PS PS QY T
Sbjct: 668 GVWHYQTE-VPGTQ---------TTAQLKLSPYVNYSFRVIAVNKIGRSQPSEPSEQYLT 717

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 939
            +  P + P+ + G G +  +L I+WEPL   + N P + YK+ WR+K+ D E+ S  + 
Sbjct: 718 KSASPDENPANVQGIGSEPDNLVITWEPLKGFQSNGPGLQYKVSWRQKDVDDEWTSVIV- 776

Query: 940 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE-SEV 978
              NV   +V     F    YEVKVQA+ND+G  PE SEV
Sbjct: 777 --ANVSKYIVSGTPTF--VPYEVKVQALNDLGYAPEPSEV 812


>gi|351695047|gb|EHA97965.1| Neural cell adhesion molecule L1-like protein [Heterocephalus
           glaber]
          Length = 1126

 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 182/680 (26%), Positives = 298/680 (43%), Gaps = 53/680 (7%)

Query: 317 CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN-YSCNVQSKVS 375
           C+PP   P ++ YW        +E+D+RV++S  G LYF+ +E+ D+ N Y C       
Sbjct: 70  CNPPKGLPPLHIYWMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRL 128

Query: 376 DTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG----------DKVRLECVAFG 425
            T        L V   ++ +Q K     P+     P++G          D + LEC A G
Sbjct: 129 RTIVQKMPMKLTVNSSNSIKQRK-----PRLLLPPPESGSESSVTILKGDTLLLECFAEG 183

Query: 426 YPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
            P P   W + G  LP+     EN+ + L I N+   D+G Y C A+N          + 
Sbjct: 184 LPTPQVEWKKMGGDLPKGRETKENYGKTLKIENISYRDKGNYRCTANNFLGTANHDFHVI 243

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++  P +            +     CEA G P  T  W  NG  + +    L   D  F 
Sbjct: 244 VEEPPRWRKKPESGVYSTGSSGILLCEAEGEPQPTIKWRVNGFPIGNH---LFAGDVVFP 300

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           ++  ++   L+P    A+YQC A N   T  ++A + V+ + P  + +  + E YA   G
Sbjct: 301 RE--VSFTNLHPNHT-AVYQCEASNIHGTVLANANIDVVDVIPLIQTK--DEENYATVIG 355

Query: 605 -NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATN 662
            +  + C   A+P+    W++        GRR +I ENG L I   + +D+G YSC   N
Sbjct: 356 YSAFLHCEYFASPEAIVTWQRMDEAQALEGRRYRIHENGTLQILGTTEEDAGSYSCWVEN 415

Query: 663 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGV 720
             G       L + +  +     P    +     L+L C +  +  L   +   W+ +G 
Sbjct: 416 AIGKTAVTANLDIRNA-TKLRVSPKNPRVPKSHILELHCESKCDSHLKHSLKLSWSKDG- 473

Query: 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 780
              + ++N  E   I ID   L I+N +  D G + C+ ++ +  I+  T V V   P  
Sbjct: 474 --EDFEINGTEDGRIVIDRANLTISNVTLEDQGVFSCLAQTALDSIAEATQVTVLDVPDP 531

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRY 838
           P  +Q+ E    S  + W  GA +   I+ Y +    N      W         +E+ R 
Sbjct: 532 PRNLQLSERQNRSVRLSWEAGADHNSNISEYIVEFEGNREEPGRW---------EELTRV 582

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
            G++  ++   L P+  Y+F+V A NE+G   PS PS  + TP   P + P  I     +
Sbjct: 583 QGKETTALLQ-LAPYVRYQFRVTAVNEVGKSHPSQPSDYHETPPAAPEKNPQNIRVQASQ 641

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYY 957
             ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  +       +R+ +   Y
Sbjct: 642 PKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTVY 695

Query: 958 TEYEVKVQAINDVGPGPESE 977
             Y+V+VQAIN +G GPE +
Sbjct: 696 APYDVQVQAINQLGSGPEPQ 715



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 135/388 (34%), Gaps = 44/388 (11%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
           + + L C+A G P P  EW K       +  +L  P   +     G  L I +     D+
Sbjct: 173 DTLLLECFAEGLPTPQVEWKK-------MGGDL--PKGRETKENYGKTLKIEN-ISYRDK 222

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEF--NLKRAPEIGNQNWGKA--MFCDPPTNYPG 325
           G+Y C A+N  G+   +     F  I E     ++ PE G  + G +  + C+     P 
Sbjct: 223 GNYRCTANNFLGTANHD-----FHVIVEEPPRWRKKPESGVYSTGSSGILLCE-AEGEPQ 276

Query: 326 VNYYWARDYFP--NFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
               W  + FP  N +     VF      + F+ L       Y C   +       N   
Sbjct: 277 PTIKWRVNGFPIGNHLFAGDVVFPR---EVSFTNLHPNHTAVYQCEASNIHGTVLANANI 333

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR--RGSPLP 441
             + V P     Q K   N+      A   G    L C  F  P     W R      L 
Sbjct: 334 DVVDVIP---LIQTKDEENY------ATVIGYSAFLHCEYFASPEAIVTWQRMDEAQALE 384

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
              Y  + N  L I     ED G Y C   N       +  + I+      +   +  + 
Sbjct: 385 GRRYRIHENGTLQILGTTEEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRVP 444

Query: 502 NQADLTWTCEAFGVPDVTY----SWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 557
               L   CE+     + +    SW ++GE  + E    ED  R  I    LTI  +  E
Sbjct: 445 KSHILELHCESKCDSHLKHSLKLSWSKDGE--DFEINGTED-GRIVIDRANLTISNVTLE 501

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
            D  ++ C A+  L +   + Q+ VL +
Sbjct: 502 -DQGVFSCLAQTALDSIAEATQVTVLDV 528


>gi|47228829|emb|CAG07561.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1197

 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 194/785 (24%), Positives = 335/785 (42%), Gaps = 91/785 (11%)

Query: 212 ITLSCYAGGYPNPSYEWFK--EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
           + + C A G P P Y W K  ED+V  R            +   + G+ ++++ + ++ +
Sbjct: 24  VKIECDARGNPPPQYRWTKDGEDFVPPRATTT--------KTQHTDGSFVLHNKQFIQFQ 75

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNY 328
           G+Y C A NK G+ +++ + L    + +F     P I  ++     + C PP        
Sbjct: 76  GTYRCYAFNKLGTAMTKEITLIVPTVPKFPKVGEPPIAVDEGDPITLHCHPPEGAVPRQL 135

Query: 329 YWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
           YW        +++D+RV +  DG LYFS AL+     +Y CN                  
Sbjct: 136 YWMSLDL-QLIQQDERVSMGTDGNLYFSHALQNDSRLDYYCNAA---------------- 178

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE 447
                          FPK          +  ++ +     V S  W + G  LP    F+
Sbjct: 179 ---------------FPKL---------RTIVQKMPMAVTVRSLKWMKMGEKLPPRTEFD 214

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN--FTIPLTDKHMDNQAD 505
           NF R+L +  V+  D G+Y+C+A N          + ++  P    T P  D+ +   +D
Sbjct: 215 NFGRLLILSEVEESDGGQYMCKAKNSAGEAVHYFNVMVEGAPPEWLTGPPQDQLLVIGSD 274

Query: 506 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 565
           +   C   G P     W +NGEL   +     + +R  + D V+ +    PE D A+YQC
Sbjct: 275 VHIKCSVSGKPSSDIIWRKNGELFIDD----PENNRRVLDDTVV-LHNAGPE-DTAVYQC 328

Query: 566 RAKNQLKTRYSSAQLRVLT------LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKP 618
            A N      ++  + V++      L  + +    +S+ Y   +G +V + C+  ++P P
Sbjct: 329 DASNGHGGLLANINIMVMSESQGSLLDMTPRILTSDSQEYPVVQGVDVIMNCSAFSSPLP 388

Query: 619 KFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677
              W +  N     G R    +NG+L I    ++DSG Y C A N  G       L V  
Sbjct: 389 TISWFRGANQEAVKGERFFTLQNGSLQIIGAEKNDSGKYVCVALNTEGKAAVTAVLDV-K 447

Query: 678 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--WTHNGVRIGNMDLNELETPNI 735
            P+     P    + +    QL C A  ++ L  +++  W  +G    ++ L+  E    
Sbjct: 448 DPTRIVSGPRDAEVMSGATAQLICQAEYDKSLQDSFVLVWRKDG---DDIPLSVEENSRY 504

Query: 736 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK-TSA 794
            +   +L I N +  D+G Y C+ ++++ +++    + V   P  P  V++ E+    + 
Sbjct: 505 AVADSMLRIMNVALNDSGTYMCIARTSLDEMNATALLTVLDVPDAPLKVEISEIRSPRNI 564

Query: 795 TIQWTDGATNGRPITHYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
           ++ W  G+ +   +T + +    + W S  +   + V G +         A+ + VL   
Sbjct: 565 SLSWVPGSDHNSSVTEFVVEFQESQWESGVWKKLQKVPGNQ---------ATADLVLHGD 615

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
            +Y+F+V A N +G G P  P+  + TP   P + P  I   G     + ISWE LP  +
Sbjct: 616 LSYKFRVYAINAVGPGPPGDPTETHKTPPAAPDRNPQDIKIQGHLPHQMDISWESLPVTE 675

Query: 914 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           QN P   YK+ +R+    +   E + +  +    VVR  S F    YEVK+Q+ ND+G G
Sbjct: 676 QNGPGFEYKVSYRRLGVEDQWREHMVKQSSF---VVRNTSTF--VPYEVKIQSRNDIGWG 730

Query: 974 PESEV 978
           PE +V
Sbjct: 731 PEPKV 735


>gi|348568085|ref|XP_003469829.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Cavia
           porcellus]
          Length = 1183

 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 220/838 (26%), Positives = 348/838 (41%), Gaps = 87/838 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV   + P S        G LIIN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT--MKPGS--------GTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 +  ++   I  QN    +  C PP   P    +W  + F   + + +RV    +
Sbjct: 135 PSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLN 193

Query: 351 GALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQ 396
           G LYFS  L +    +Y C  +   + T +      LKV                + F  
Sbjct: 194 GDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYG 253

Query: 397 LKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFE 447
            K     P TF  PE   +      G+ + LEC+A G P P   W +    LP N  ++ 
Sbjct: 254 AKSSKERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYR 313

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
           NF + L I  V   D G Y C A N    +  +++++++A P + +   +  +    D T
Sbjct: 314 NFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKAAPYWIMAPRNLVLSPGEDGT 373

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCR 566
             C A G P    SW  NG  + +E  P +D  R    D   TI + N  ER  A+YQC 
Sbjct: 374 LICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFSNVQERSSAVYQCN 427

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
           A N+     ++A + VL   P     P  +           + C    +P P   W K  
Sbjct: 428 ASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGA 486

Query: 627 NIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
              GS     I+   ENG L I    +D+SG Y+C A N  G+ +++  L +   P+   
Sbjct: 487 K--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPTRIL 543

Query: 684 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 743
           + P    +     +   C    +  L     W  +   + N +          +D   L 
Sbjct: 544 KQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE-------RFTVDKDHLV 596

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 803
           +T+   +D G Y CV  +T+ ++S    + V   P  P  +++ +    S  + WT G  
Sbjct: 597 VTDVRDSDGGIYTCVANTTLDEVSASAVLSVVDVPSPPFDLELTDQLDKSVQLSWTPGDD 656

Query: 804 NGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
           N  PIT + I      +    W + +E              + + +  L P+  Y F+V+
Sbjct: 657 NNSPITKFIIEYEDAMHEAGLWHHQAE----------VSGTQTTAQLKLSPYVNYSFRVM 706

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + Y
Sbjct: 707 AENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQY 766

Query: 922 KIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           K+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+N +G  PE  V
Sbjct: 767 KVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNVMGFAPEPAV 819


>gi|431839377|gb|ELK01303.1| Neuronal cell adhesion molecule [Pteropus alecto]
          Length = 1210

 Score =  222 bits (565), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 227/837 (27%), Positives = 347/837 (41%), Gaps = 92/837 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN--DPRQVED-RGSYHCKASNKFGSIISESVQLA 291
           +D LV    D           G LIIN     +VE   G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDLLVTMKPD----------SGTLIINIMSEGKVETYEGVYQCTARNERGAAISNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 +  ++   I  +N    +  C PP   P    +W  + F   + + +RV    +
Sbjct: 135 PSRSPLWTKEKLEPITLRNGQPLVLPCRPPVGLPSPIIFWMDNSF-QRLPQSERVSQGLN 193

Query: 351 GALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQ 396
           G LYFS  L +    +Y C  +   + T +      +KV                + F  
Sbjct: 194 GDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYG 253

Query: 397 LKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFE 447
            K     P TF  PE   +      G+ + LEC+A G P P   W +    LP N  ++ 
Sbjct: 254 AKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYR 313

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
           NF + L I  V   D G Y C A N   A+  +++++++A P + +   +  +    D  
Sbjct: 314 NFQKTLQIIQVSEADSGNYQCIAKNALGAIYHTISVTVKAAPYWIMAPQNLVLSPGEDGA 373

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCR 566
             C A G+P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC 
Sbjct: 374 LICRANGIPKPRISWLLNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQCN 427

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKD 625
           A N+     ++A + VL   P        +  Y        +  C    +P P   W K 
Sbjct: 428 ASNEYGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS  R  I+   ENG L I    +D +G Y+C A N  GM +++ RL +   P+  
Sbjct: 486 AK--GSALREDIYVLHENGTLEIPVAQKDSTGSYTCVARNKLGMAKNEVRLEI-KDPTRI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L     W  +   + N            +D   L
Sbjct: 543 IKQPEYAIVQRGSTVSFECRVKHDHTLIPTVTWLKDNGELPN-------DGRFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            I + S  D G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VIADVSDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862
            N  PIT+    A       W + +E V G +          + +  L P+  Y F+V+A
Sbjct: 656 DNNSPITNAMHEA-----GLWHHQTE-VPGTQT---------TAQLKLSPYVNYSFRVMA 700

Query: 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 922
            N LG   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + YK
Sbjct: 701 ENSLGRSLPSEVSEQYLTKAAEPDKNPTTVEGLGSEPDNLVITWKPLNGFESNGPGLQYK 760

Query: 923 IFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 761 VSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPPV 812



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 16/128 (12%)

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
           PG V V  V+ T A ++W        PI ++K    +  N          I K++  + G
Sbjct: 826 PGNVHVNVVNSTLAEVRWD-------PIYYWKAQNSSKRN-------RRHIEKKILTFQG 871

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
            K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS +      + 
Sbjct: 872 SKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLKIVNPTLD 929

Query: 901 DLSISWEP 908
            L++ W+P
Sbjct: 930 SLTLEWDP 937


>gi|74009165|ref|XP_549364.2| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Canis lupus
           familiaris]
          Length = 1256

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 208/824 (25%), Positives = 351/824 (42%), Gaps = 86/824 (10%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLID 244
           Y + +P  +     +R ++   +DI+L C A G P   + W ++      ++ L   +  
Sbjct: 29  YRVMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQ 88

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
                 FT++G N       Q    G+Y C ASNK G+ +S  +QL      ++  +   
Sbjct: 89  APHSGSFTITGNNSNFAQRFQ----GTYRCFASNKLGTAMSHEIQLMAEGAPKWPKEMVK 144

Query: 305 EIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
            +  +     +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +
Sbjct: 145 PVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDN 203

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVR 418
             +Y C+     + T        L+V   ++      +L FP N           G  + 
Sbjct: 204 HSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLV 261

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC+A G+P PS  W R   P+P +   ++N N+ L + NV  ED GEY C A N   + 
Sbjct: 262 LECIAEGFPTPSIKWLRPSGPMPADRVTYQNHNKTLQLLNVAEEDDGEYRCLAENSLGSD 321

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +  ++++A P + +     H+    +     C+  G P    +W  NG       +P+
Sbjct: 322 RHTYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPV 373

Query: 537 ED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           E+     +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L P+    P
Sbjct: 374 EELAKDQKYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQL-PAKILTP 431

Query: 594 LESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRD 651
            ++ETY A EG    + C    AP P   W  K+G  +    R   + NG L I  +  +
Sbjct: 432 -DNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 490

Query: 652 DSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAH 704
           D+G Y C A N      +    + K    +  GP S  E+   K+T          C A 
Sbjct: 491 DTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFT--------CQAS 542

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            +  L  +  W  +G      +L E  ++    I+ G L I +  ++D G Y CV  + +
Sbjct: 543 FDPSLQHSITWRGDG-----RNLQEFGDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTEL 597

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------I 814
             +  +  ++V G PG    +++ + H   ++   + W     +  PI  Y I      +
Sbjct: 598 DMVEGRAELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEM 657

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
           A   W S         +GK     T     S    L P+  Y F+V A N+ G GEPS  
Sbjct: 658 APEKWYS---------LGKVPGNQT-----STTLKLSPYIHYTFRVTAINKYGPGEPSPA 703

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           S    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +      
Sbjct: 704 SETVVTPEAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAW 763

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            E +     V   ++ + +   +  YE+KVQA+N  G GPE ++
Sbjct: 764 QEQI-----VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQI 802


>gi|345807361|ref|XP_003435599.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Canis lupus
           familiaris]
          Length = 1252

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 208/824 (25%), Positives = 351/824 (42%), Gaps = 86/824 (10%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLID 244
           Y + +P  +     +R ++   +DI+L C A G P   + W ++      ++ L   +  
Sbjct: 29  YRVMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQ 88

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
                 FT++G N       Q    G+Y C ASNK G+ +S  +QL      ++  +   
Sbjct: 89  APHSGSFTITGNNSNFAQRFQ----GTYRCFASNKLGTAMSHEIQLMAEGAPKWPKEMVK 144

Query: 305 EIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
            +  +     +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +
Sbjct: 145 PVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDN 203

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVR 418
             +Y C+     + T        L+V   ++      +L FP N           G  + 
Sbjct: 204 HSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLV 261

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC+A G+P PS  W R   P+P +   ++N N+ L + NV  ED GEY C A N   + 
Sbjct: 262 LECIAEGFPTPSIKWLRPSGPMPADRVTYQNHNKTLQLLNVAEEDDGEYRCLAENSLGSD 321

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +  ++++A P + +     H+    +     C+  G P    +W  NG       +P+
Sbjct: 322 RHTYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPV 373

Query: 537 ED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           E+     +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L P+    P
Sbjct: 374 EELAKDQKYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQL-PAKILTP 431

Query: 594 LESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRD 651
            ++ETY A EG    + C    AP P   W  K+G  +    R   + NG L I  +  +
Sbjct: 432 -DNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 490

Query: 652 DSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAH 704
           D+G Y C A N      +    + K    +  GP S  E+   K+T          C A 
Sbjct: 491 DTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFT--------CQAS 542

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            +  L  +  W  +G      +L E  ++    I+ G L I +  ++D G Y CV  + +
Sbjct: 543 FDPSLQHSITWRGDG-----RNLQEFGDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTEL 597

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------I 814
             +  +  ++V G PG    +++ + H   ++   + W     +  PI  Y I      +
Sbjct: 598 DMVEGRAELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEM 657

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
           A   W S         +GK     T     S    L P+  Y F+V A N+ G GEPS  
Sbjct: 658 APEKWYS---------LGKVPGNQT-----STTLKLSPYIHYTFRVTAINKYGPGEPSPA 703

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           S    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +      
Sbjct: 704 SETVVTPEAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAW 763

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            E +     V   ++ + +   +  YE+KVQA+N  G GPE ++
Sbjct: 764 QEQI-----VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQI 802


>gi|345807363|ref|XP_003435600.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Canis lupus
           familiaris]
          Length = 1247

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 213/834 (25%), Positives = 354/834 (42%), Gaps = 91/834 (10%)

Query: 180 IENPDKIPRGPYFIKQPTD--VVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY---V 234
           I+ PD++   P   +Q     VVF        +DI+L C A G P   + W ++      
Sbjct: 20  IQIPDELMEPPVITEQSPRRLVVFPT------DDISLKCEASGKPEVQFRWTRDGVHFKP 73

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
           ++ L   +        FT++G N       Q    G+Y C ASNK G+ +S  +QL    
Sbjct: 74  KEELGVTVHQAPHSGSFTITGNNSNFAQRFQ----GTYRCFASNKLGTAMSHEIQLMAEG 129

Query: 295 IGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
             ++  +    +  +     +  C PP +   +  YW      + +++D+RV +  +G L
Sbjct: 130 APKWPKEMVKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNL 188

Query: 354 YFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFP 408
           YF+  L   +  +Y C+     + T        L+V   ++      +L FP N      
Sbjct: 189 YFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL- 247

Query: 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYI 467
                G  + LEC+A G+P PS  W R   P+P +   ++N N+ L + NV  ED GEY 
Sbjct: 248 -VALQGQPLVLECIAEGFPTPSIKWLRPSGPMPADRVTYQNHNKTLQLLNVAEEDDGEYR 306

Query: 468 CRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNG 526
           C A N   +   +  ++++A P + +     H+    +     C+  G P    +W  NG
Sbjct: 307 CLAENSLGSDRHTYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING 365

Query: 527 ELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
                  +P+E+     +Y IQ   L +  + P  D  + QC A+N+     ++A + V+
Sbjct: 366 -------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVV 417

Query: 584 TLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENG 641
            L P+    P ++ETY A EG    + C    AP P   W  K+G  +    R   + NG
Sbjct: 418 QL-PAKILTP-DNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNG 475

Query: 642 NLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAH 694
            L I  +  +D+G Y C A N      +    + K    +  GP S  E+   K+T    
Sbjct: 476 TLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFT-- 533

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAG 753
                 C A  +  L  +  W  +G      +L E  ++    I+ G L I +  ++D G
Sbjct: 534 ------CQASFDPSLQHSITWRGDG-----RNLQEFGDSDKYFIEDGRLVIHSVDYSDQG 582

Query: 754 EYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITH 810
            Y CV  + +  +  +  ++V G PG    +++ + H   ++   + W     +  PI  
Sbjct: 583 NYSCVAGTELDMVEGRAELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEK 642

Query: 811 YKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
           Y I      +A   W S         +GK     T     S    L P+  Y F+V A N
Sbjct: 643 YDIEFEDKEMAPEKWYS---------LGKVPGNQT-----STTLKLSPYIHYTFRVTAIN 688

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
           + G GEPS  S    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ 
Sbjct: 689 KYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQ 748

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           WR +       E +     V   ++ + +   +  YE+KVQA+N  G GPE ++
Sbjct: 749 WRPQGTRGAWQEQI-----VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQI 797


>gi|393905222|gb|EJD73902.1| immunoglobulin I-set domain-containing protein [Loa loa]
          Length = 1181

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 219/791 (27%), Positives = 347/791 (43%), Gaps = 72/791 (9%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYH 273
           L CYA G P  +YEWFK      RL  +    + +K+F    G +IIND  Q  D+G Y 
Sbjct: 50  LPCYATGNPE-TYEWFKNG---KRLEVDNNRIVWEKQF--QSGTIIINDA-QDGDQGYYQ 102

Query: 274 CKASNKFGSIISESVQLAFGFIGEF---NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYW 330
           C ASN FG+ +S    +  G +  F    ++R   I ++    ++ CD P   P  + +W
Sbjct: 103 CHASNIFGTAVSNKFHVQIGVLDHFAPRGVRRL--IVDEGGSLSIRCDIPFGVPKPSVFW 160

Query: 331 A-RDYFPNFVEED---KRVFVSYDGALYFSALEQIDAGN---YSCNVQSKV-SDTGRNGP 382
             RD     V E    K + V  +G L+F+A+E+ D      Y C   S V     R G 
Sbjct: 161 LYRDAQRTNVMETIRRKHIAVDTEGTLHFTAVEKHDGRQNLIYQCAATSPVLRGEYRAGN 220

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP- 441
            F L V              +      + K G K++L C+  G P+P+  W++    LP 
Sbjct: 221 EFQLIVDSAKKSNGTVIHKLWFSPEEVSVKVGTKLKLMCIFGGRPLPNITWSKLNGELPF 280

Query: 442 -RNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
            R   F+    +F + L I NV+ ED G Y CR+ +    L   + ++  A P F I   
Sbjct: 281 TRLKDFKSQEADFGKALIIENVRAEDAGIYECRSQH----LFHQMHVTTAAAP-FWIDKP 335

Query: 497 DKHMD----NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLT 550
            + +D    N  ++   C   G+P     WF NG  L+     L D DR  I +N  +L 
Sbjct: 336 PQDIDEPEGNAGEIH--CVTSGIPTPIVQWFINGVPLHE----LADNDRRMILNNGQILR 389

Query: 551 IRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC 610
           I  L+ + D A+YQC A N     + +A + V    P FK  P            V + C
Sbjct: 390 IVNLDHDIDTAVYQCNASNPFGYVFGNAFVNVRAYAPYFKM-PSHRVWNVVRKSTVEMSC 448

Query: 611 NPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 668
           + +AAP+    W    D  +    G+  IF N  L +S V+  D G+Y C  +N +G++ 
Sbjct: 449 DVDAAPEAVVKWVDANDHPLAVVLGKIHIFRNHTLRLSQVNSADEGLYYCNVSNKYGINR 508

Query: 669 SKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 726
           +  RL V   P+++ ++P   K+ + AH +++  C A  +  L + Y WT NG+ I    
Sbjct: 509 AVNRLQVF-SPTHFIRVPSPKKLILEAHESVEYICEAVCDPRLTIEYSWTRNGIPIN--- 564

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-KISTKTTVIVEGP--PGLPGG 783
            + +   ++N     L I +A    +G  +C+  + V  KIS     +++ P  P + G 
Sbjct: 565 -DSVHFKSLN---NSLLIVDARGIHSGVIDCIALTNVDVKISGVELTVLDVPDAPIVTG- 619

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
              +  ++  A + W     +G  I  + +   T +      + + V+ KE    T    
Sbjct: 620 ---INCNERRAMLSWRRPVDHGDQIKQFLVQMHTEFEE---GLWQTVVEKE---NTAADF 670

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
             ++  L PW  Y F+VIA N  G  EP        +T A  P+  P  +   G +  ++
Sbjct: 671 YQVDIALSPWVNYTFRVIARNSRGESEPGFKEGIVCSTKAYYPFTNPKDVRAEGSEPSNI 730

Query: 903 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
            I W+P+ +   N P + Y + +R     E  +E   E       VVR    F   EY V
Sbjct: 731 IIEWKPMNKYDWNGPGLQYIVRYRLNEPGETWTEIRIEDPLANHTVVREQPTF--REYLV 788

Query: 963 KVQAINDVGPG 973
           +V+++N  GP 
Sbjct: 789 QVESLNSFGPA 799


>gi|95007731|dbj|BAE94191.1| L1-like cell adhesion molecule [Dugesia japonica]
          Length = 1351

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 211/798 (26%), Positives = 340/798 (42%), Gaps = 65/798 (8%)

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL--SGGNLIINDPRQV 266
           L  + L C A G P+P+Y W K + V D         ++  R+T   + G +I+  P   
Sbjct: 41  LEALMLRCVATGSPSPTYTWLKNNKVFDF-------SINVGRYTKWPNEGTMILALPND- 92

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYP 324
           +D G Y C A N  G   S    +    I  F   + PE      G+ +   C+ P  +P
Sbjct: 93  DDDGIYQCIAENSHGKAYSIKSNVRRAEIQNFK-NKDPEKITARQGEYLLLKCEVPVCFP 151

Query: 325 GVNYYWAR--DYFPNFVEEDKRVFVSYDGALYFSALE-QIDAGNYSCNVQSKVSDTGRNG 381
                W +  +     ++E  +  +  DG LY + L  + D   +SC V ++     ++ 
Sbjct: 152 PPIVVWQKIKNGIAELIKESSKYVMDIDGNLYITGLTMEDDQAKFSCTVYNQRMRMTKSD 211

Query: 382 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRG---S 438
               + V P  +   L     F    P   + GDK+ L C+  GYP P+Y WT +G   S
Sbjct: 212 KEHWITVIPGQS--NLPVVLRFRSLQPMNGRVGDKLVLRCILSGYPSPNYKWTVKGQDKS 269

Query: 439 PLPRNAYFENFN-RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE--PNFTIPL 495
            L R  +  +    IL I  V   DQ  + C   N  S +   +   +  E  P  T  L
Sbjct: 270 ILERPNFITDAGGAILIINPVTTADQDTFQCTGENAVSNIPIVIDFQVNVEMTPILTTKL 329

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN 555
           +D ++       ++CEA G P+   +W  NG  L++    L  Q++  I + +     L 
Sbjct: 330 SDANVPYNGSHVFSCEAIGRPNPVITWTVNGVGLDTY---LNGQNKRKIGNTIYLTNLL- 385

Query: 556 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 615
              D A++QC A N +   YS+  + VL  KP F   P ++     E    TI C   +A
Sbjct: 386 -PGDHAVFQCNASNYIGYDYSNGYINVLRDKPEFINGP-QATLIKAENKPATINCQAFSA 443

Query: 616 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           PK    W KDG  I +GGR  I +NG+LLI+ +   DSG Y+CTATN++G     G  +V
Sbjct: 444 PKAIVTWTKDGFPI-NGGRYMIQDNGDLLITKLITADSGTYTCTATNLYG--SISGTCVV 500

Query: 676 LHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEEL--LDVAYIWTHNGVRIGNMDLNELET 732
                    + P  T +   + ++  C+A T+ L   ++  +W  +   I    +   E 
Sbjct: 501 FVRQRTELMIRPINTWVYFGQEVKFVCTAKTDRLETQNLKIVWYKDNSPI---TIGPYER 557

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV---VEV 789
            N N+    L I  A   D G Y C   + +       T+IV+G P  P  ++       
Sbjct: 558 TNTNLQDNSLIIMGAQTTDTGIYTCNATNGLDFDVAYATLIVQGKPHTPIDIKADCSRFA 617

Query: 790 HKTSATIQWTDGATNGRPITHYKIIARTNWNST-WFNVSEHVIGKEVDRYTGR--KEASI 846
           +   A + W  GA N  PI  Y +   T ++   W+ V      ++V + TG   +   +
Sbjct: 618 NNREAVVSWNPGADNYAPIVMYLVEYSTQFDRKGWYEV------QKVTKITGSTGETVDV 671

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ-YNTPADKPYQAPSRIGGGGGKIGDLSIS 905
           +  + P+  Y+F+V A N +G  EPS  +    + P   P + P  +   G    +L I 
Sbjct: 672 KVAMQPFIQYQFRVRAINRVGVSEPSDVTLNPCSLPPTIPNKNPKEVFVYGTAKDNLVIQ 731

Query: 906 WEPLPREKQNAPNIYYKI---------FWRKKNDTEFQS---ETLKEYGNVGIAVVRIPS 953
           W P+   +  AP + Y I           +   +T F S   + +  Y N  +  V    
Sbjct: 732 WTPMTYVEHCAPKLVYHITVICITCQSIPKNATNTTFISDWDQNIVTYYNFQLGSVTYDM 791

Query: 954 EFYYTEYEVKVQAINDVG 971
           E  + +++V +QA N++G
Sbjct: 792 E-SFQQFKVTIQAKNEIG 808


>gi|281500792|pdb|3JXA|A Chain A, Immunoglobulin Domains 1-4 Of Mouse Cntn4
 gi|281500793|pdb|3JXA|B Chain B, Immunoglobulin Domains 1-4 Of Mouse Cntn4
          Length = 383

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 204/401 (50%), Gaps = 27/401 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 4   GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 53

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 54  FRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 113

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 114 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 171

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P   + G  V+LEC A 
Sbjct: 172 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFAL 229

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 230 GNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 289

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  +DR  
Sbjct: 290 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLTRDRIQ 342

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+ 
Sbjct: 343 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIA 382



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 150/383 (39%), Gaps = 46/383 (12%)

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRAS 471
           KV+L C   G P P   W   G+ +     F     + + ++  PN K +D G Y C A+
Sbjct: 24  KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPN-KTQDAGTYQCIAT 82

Query: 472 NDRSALES-SVTISIQAEPNF-TIPLTDKHMDNQADLTWTCEAFGVP----DVTYSWFRN 525
           N    + S    +      NF T   +   +     +   C   G P    +++Y+W  N
Sbjct: 83  NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 139

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLT 584
                    P    +R F+      +     E+ D   Y C   N +           L 
Sbjct: 140 -------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLI 192

Query: 585 LK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGR 634
           L+         P  + +  E+   A +G  V + C     P P  +W++ DG  I    R
Sbjct: 193 LRNDGVMGEYEPKIEVQFPET-VPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKAR 251

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
           R    NG L I    ++D+G Y C A N  G + +KG+L     P++  Q+   I +A  
Sbjct: 252 RHK-SNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAME 309

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
            ++   C A+        Y W  NG  +   D        I I+ G L IT  + +DAG 
Sbjct: 310 ESVFWECKANGRP--KPTYRWLKNGDPLLTRD-------RIQIEQGTLNITIVNLSDAGM 360

Query: 755 YECVVKSTVGKI--STKTTVIVE 775
           Y+CV ++  G I  S + +VI E
Sbjct: 361 YQCVAENKHGVIFSSAELSVIAE 383



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 129/325 (39%), Gaps = 34/325 (10%)

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           +  +  +CE  G P     W      LN   + +    RY + D  L I   N  +D   
Sbjct: 22  EKKVKLSCEVKGNPKPHIRW-----KLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGT 76

Query: 563 YQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 620
           YQC A N   T  S  A+L+   L+ +FK R   S      G  + + C P   + +  +
Sbjct: 77  YQCIATNSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSY 134

Query: 621 VWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLH 677
            W  +        RR +  E GNL I+ V + D G Y+C  TN     +  G    ++L 
Sbjct: 135 AWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILR 194

Query: 678 GPSYYEQLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLN 728
                 +  PKI      T+ A +   ++L C A    +  +  +W   +G  I      
Sbjct: 195 NDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA----- 247

Query: 729 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV- 787
                  +   G+LEI N    DAG YECV +++ GK   K  +     P     VQ++ 
Sbjct: 248 --RKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIIN 302

Query: 788 EVHKTSATIQWTDGATNGRPITHYK 812
           ++H       + +   NGRP   Y+
Sbjct: 303 DIHVAMEESVFWECKANGRPKPTYR 327



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 639
           V   +PS    PL+SE        V + C  +  PKP   WK +G    IG   R  + +
Sbjct: 6   VFVQEPSHVMFPLDSEEK-----KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVD 60

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
              L+ +P    D+G Y C ATN  G   S+  +L   +  ++  +    +++   + + 
Sbjct: 61  GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 120

Query: 699 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 749
           L C    H+ EL   +Y W  N            E P+       ++ + G L I     
Sbjct: 121 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 165

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           +D G Y CVV +TV      T   V GPP
Sbjct: 166 SDVGNYTCVVTNTV------TNHKVLGPP 188



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 11/139 (7%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG+Y C  ++     G+N     L  +   N+ Q+   N+      E
Sbjct: 256 NGILEIPNFQQEDAGSYECVAEN---SRGKNVAKGQLTFYAQPNWVQII--NDIHVAMEE 310

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           +      V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 311 S------VFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 364

Query: 470 ASNDRSALESSVTISIQAE 488
           A N    + SS  +S+ AE
Sbjct: 365 AENKHGVIFSSAELSVIAE 383


>gi|170589239|ref|XP_001899381.1| Immunoglobulin I-set domain containing protein [Brugia malayi]
 gi|158593594|gb|EDP32189.1| Immunoglobulin I-set domain containing protein [Brugia malayi]
          Length = 1171

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 219/788 (27%), Positives = 347/788 (44%), Gaps = 70/788 (8%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYH 273
           L CYA G P  +YEWFK+    ++L  +      +K+F    G +IIND R   D+G Y 
Sbjct: 50  LPCYATGNPE-TYEWFKDG---EKLKVDGDRIAWEKQF--QSGTIIINDARD-GDQGYYQ 102

Query: 274 CKASNKFGSIISESVQLAFGFIGEF---NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYW 330
           C ASN FG  +S    +  G +  F    ++R   I ++    ++ CD P   P  + +W
Sbjct: 103 CHASNIFGIAVSNKFHVQIGVLDHFVPRGVRRL--IVDEGQSLSIRCDIPYGVPKPSVFW 160

Query: 331 A-RD-YFPNFVE--EDKRVFVSYDGALYFSALEQIDAGN---YSCNVQSKV-SDTGRNGP 382
             RD    N +E    K + V  +G L+F+A+++ D      Y C V S V     R G 
Sbjct: 161 LYRDTQRTNMIETIRYKHIAVDTEGTLHFTAVKKHDGRQNLIYQCAVTSPVLRGEYRAGN 220

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS--PL 440
            F L V P            +      + K G K++L C+  G P+P+  W++     PL
Sbjct: 221 EFQLIVNPAKKNNGTAIHKLWFSPEKVSVKVGTKLKLMCIFGGRPLPNITWSKLNDDLPL 280

Query: 441 PRNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI--P 494
            R   F+    ++ + L I NV+ ED G Y CR+ +    L   + ++  A P F I  P
Sbjct: 281 ARLKDFKSQEADYGKALIIENVRSEDAGIYECRSQH----LFHQMHVTTNAAP-FWIDKP 335

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIR 552
             D      +     C   G+P     WF NG  L+     L D DR  I ++  +L I 
Sbjct: 336 PEDIDEPEGSSAEIHCTISGIPTPIIQWFINGVPLHE----LADNDRRMILNSGQILRIV 391

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            L+ + D A+YQC A N     + +A + V    P FK  P            V + C+ 
Sbjct: 392 NLDHDVDTAVYQCNASNPFGYVFGNAFVNVRAYAPYFKM-PSHRIWNVVRKSTVEMSCDV 450

Query: 613 EAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK 670
           EAAPK    W    D +I     +  IF N  L IS V+  D G+Y C  +N +G++ + 
Sbjct: 451 EAAPKAVVKWVDTNDHSIAVVLEKINIFPNHTLRISQVNSADEGLYYCNVSNKYGINRAV 510

Query: 671 GRLIVLHGPSYYEQLP-PKITI-AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
            +L V + P+++ ++P PK +I  AH +++  C A  +  L + Y WTHNG+ I      
Sbjct: 511 NQLQVFN-PTHFIRVPSPKKSILEAHESVEYVCEAVCDPRLTIEYSWTHNGIPIN----- 564

Query: 729 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-KISTKTTVIVEGP--PGLPGGVQ 785
             ++ +  +    L I NA    +G  +C+V + V  KIS     +++ P  P + G   
Sbjct: 565 --DSVHFKLLNNSLLIVNARGFHSGTIDCIVLTDVDVKISGIELTVLDVPAAPIITG--- 619

Query: 786 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYTGRKEA 844
            +  ++  A ++W     +G  I  + I   T +    W  V E       +  T     
Sbjct: 620 -INCNERRAMLRWRRPDDHGDQIKQFLIQMHTEFEEGLWQTVVE-------EENTAADFY 671

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
             +  L PW  Y F++IA N  G  EP        +T A  P+  P  +   G +  ++ 
Sbjct: 672 QADIALSPWVNYTFRIIARNSRGESEPGFKEGIVCSTKAYYPFTNPKDVRAEGSEPNNMI 731

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I W+P+ +   N P + Y + ++     E  +E   E       V+R    F   EY ++
Sbjct: 732 IEWKPMDKYDWNGPGLQYIVRYKFNKPGEAWTEIRIEDPLANYTVIREQPTF--REYLIQ 789

Query: 964 VQAINDVG 971
           V+++N  G
Sbjct: 790 VESLNSFG 797


>gi|281500916|pdb|3KLD|A Chain A, Ptprg Cntn4 Complex
          Length = 384

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 204/401 (50%), Gaps = 27/401 (6%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F+++P+ V+F L        + LSC   G P P   W        +L    +D   D
Sbjct: 5   GPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KLNGTDVDIGMD 54

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG- 307
            R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +    +  
Sbjct: 55  FRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSV 114

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ D GNY
Sbjct: 115 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNY 172

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAF 424
           +C V + V++    GP  PL +       +   K    FP+T P   + G  V+LEC A 
Sbjct: 173 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKLECFAL 230

Query: 425 GYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483
           G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    +   +
Sbjct: 231 GNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 290

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           +  A+PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  +DR  
Sbjct: 291 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLTRDRIQ 343

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           I+   L I  +N   D  MYQC A+N+    +SSA+L V+ 
Sbjct: 344 IEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVIA 383



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 150/383 (39%), Gaps = 46/383 (12%)

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRAS 471
           KV+L C   G P P   W   G+ +     F     + + ++  PN K +D G Y C A+
Sbjct: 25  KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPN-KTQDAGTYQCIAT 83

Query: 472 NDRSALES-SVTISIQAEPNF-TIPLTDKHMDNQADLTWTCEAFGVP----DVTYSWFRN 525
           N    + S    +      NF T   +   +     +   C   G P    +++Y+W  N
Sbjct: 84  NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 140

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLT 584
                    P    +R F+      +     E+ D   Y C   N +           L 
Sbjct: 141 -------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLI 193

Query: 585 LK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGR 634
           L+         P  + +  E+   A +G  V + C     P P  +W++ DG  I    R
Sbjct: 194 LRNDGVMGEYEPKIEVQFPET-VPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKAR 252

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
           R    NG L I    ++D+G Y C A N  G + +KG+L     P++  Q+   I +A  
Sbjct: 253 RHK-SNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAME 310

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
            ++   C A+        Y W  NG  +   D        I I+ G L IT  + +DAG 
Sbjct: 311 ESVFWECKANGRP--KPTYRWLKNGDPLLTRD-------RIQIEQGTLNITIVNLSDAGM 361

Query: 755 YECVVKSTVGKI--STKTTVIVE 775
           Y+CV ++  G I  S + +VI E
Sbjct: 362 YQCVAENKHGVIFSSAELSVIAE 384



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 129/325 (39%), Gaps = 34/325 (10%)

Query: 503 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562
           +  +  +CE  G P     W      LN   + +    RY + D  L I   N  +D   
Sbjct: 23  EKKVKLSCEVKGNPKPHIRW-----KLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGT 77

Query: 563 YQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 620
           YQC A N   T  S  A+L+   L+ +FK R   S      G  + + C P   + +  +
Sbjct: 78  YQCIATNSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSY 135

Query: 621 VWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLH 677
            W  +        RR +  E GNL I+ V + D G Y+C  TN     +  G    ++L 
Sbjct: 136 AWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILR 195

Query: 678 GPSYYEQLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLN 728
                 +  PKI      T+ A +   ++L C A    +  +  +W   +G  I      
Sbjct: 196 NDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIARKARR 253

Query: 729 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV- 787
                  +   G+LEI N    DAG YECV +++ GK   K  +     P     VQ++ 
Sbjct: 254 -------HKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIIN 303

Query: 788 EVHKTSATIQWTDGATNGRPITHYK 812
           ++H       + +   NGRP   Y+
Sbjct: 304 DIHVAMEESVFWECKANGRPKPTYR 328



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 11/139 (7%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG+Y C  ++     G+N     L  +   N+ Q+   N+      E
Sbjct: 257 NGILEIPNFQQEDAGSYECVAEN---SRGKNVAKGQLTFYAQPNWVQII--NDIHVAMEE 311

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           +      V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 312 S------VFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 365

Query: 470 ASNDRSALESSVTISIQAE 488
           A N    + SS  +S+ AE
Sbjct: 366 AENKHGVIFSSAELSVIAE 384



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 639
           V   +PS    PL+SE        V + C  +  PKP   WK +G    IG   R  + +
Sbjct: 7   VFVQEPSHVMFPLDSEEK-----KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVD 61

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
              L+ +P    D+G Y C ATN  G   S+  +L   +  ++  +    +++   + + 
Sbjct: 62  GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 121

Query: 699 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 749
           L C    H+ EL   +Y W  N            E P+       ++ + G L I     
Sbjct: 122 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 166

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           +D G Y CVV +TV      T   V GPP
Sbjct: 167 SDVGNYTCVVTNTV------TNHKVLGPP 189


>gi|350588948|ref|XP_003482751.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Sus scrofa]
          Length = 1183

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 226/841 (26%), Positives = 347/841 (41%), Gaps = 93/841 (11%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G L IN   D +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT----------MKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIR 134

Query: 292 FGFIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 +  ++  P          + C PP   P    +W  + F   + + +RV    +
Sbjct: 135 SSRSPLWTKEKLEPMTLRSGQSLVLPCRPPMGLPPPIIFWMDNSF-QRLPQSERVSQGLN 193

Query: 351 GALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQ 396
           G LYFS +   DA  +Y C  +   + T +      +KV                + F  
Sbjct: 194 GDLYFSNVLPEDAREDYICYARFNHTQTIQQKQPISVKVTSVDELNDTIAANLSDTEFYG 253

Query: 397 LKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFE 447
            K     P TF  PE   +      G+ + LEC+A G P P   W +    LP N  ++ 
Sbjct: 254 AKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYR 313

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
           NF + L I  V   D G Y C A N   A+  +++++++A P + I   +  +    D T
Sbjct: 314 NFKKTLQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKAAPYWIIAPQNLVLSPGEDGT 373

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCR 566
             C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  ++YQC 
Sbjct: 374 LICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVYQCN 427

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFVWKK 624
           A N+     ++A + VL   P        + T      +   F  C    +P P   W K
Sbjct: 428 ASNEYGYLLANAFVNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIEWFK 484

Query: 625 DGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
                GS  R  I+   ENG L I    +D +G Y+C A N  GM +++  L +   P+ 
Sbjct: 485 GAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTR 541

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDGG 740
             + P    +     +   C    +  L +   W          D +EL +     +D  
Sbjct: 542 IIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTVDKD 593

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
            L + + +  D G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT 
Sbjct: 594 HLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDRSVQLSWTP 653

Query: 801 GATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
           G  N  PIT + I      +    W + +E V G +          + +  L P+  Y F
Sbjct: 654 GDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------TAQLKLSPYVNYAF 703

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           +V+A N LG   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P 
Sbjct: 704 RVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESNGPG 763

Query: 919 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
           + YK+ WR+K+ D E+ S  +    NV   +V     F    Y VKVQA+NDVG  PE  
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNDVGFAPEPA 818

Query: 978 V 978
           V
Sbjct: 819 V 819



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +N N          I K
Sbjct: 833 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 885

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   ++TP   P  APS + 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 943

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958


>gi|449275013|gb|EMC84019.1| Neuronal cell adhesion molecule [Columba livia]
          Length = 1308

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 226/879 (25%), Positives = 364/879 (41%), Gaps = 93/879 (10%)

Query: 150 MEPLLFICEASIQK-----LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQ-PTDVVFDL 203
           M+P + + + S+       + +L          +D +  +++ + P   +Q P D + D 
Sbjct: 1   MQPKIMMKKKSVSASKASLVLFLCQMISALDVPLDSKLLEELSQPPTITQQSPKDYIVDP 60

Query: 204 SKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLII--- 260
            +     +I + C A G P PS+ W +     D      ID  +      + G L+I   
Sbjct: 61  RE-----NIVIQCEAKGKPPPSFSWTRNGTHFD------IDKDAQVTMKPNSGTLVINIM 109

Query: 261 NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCDP 319
           N  +     G Y C A N+ G+ IS ++ +       +  +R  P    +     + C P
Sbjct: 110 NGGKAEAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKERLEPNHVREGDSLVLHCRP 169

Query: 320 PTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTG 378
           P   P    +W  + F   + + +RV    +G LYFS ++  D   +Y C  +   + T 
Sbjct: 170 PVGLPPPIIFWMDNAF-QRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQTI 228

Query: 379 RNGPFFPLKVFPHSNFQQL------------------KFPNNFPKTFPEAPKA---GDKV 417
           +      +KVF   +                      + P     T   + K    G+ +
Sbjct: 229 QQKQPISVKVFSMDSLNDTIAANLSDTDIYGAKPVTERQPVLLTPTGSTSTKVELRGNVL 288

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W + G  LP N  +FENF + L I +V   D G Y C A N   +
Sbjct: 289 LLECIAAGLPTPVIRWIKEGGELPANRTFFENFKKTLKIIDVSEADSGNYKCIARNMLGS 348

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
               ++++++A P +     +  +    D T  C A G P    SW  NG  +    +  
Sbjct: 349 AHHVISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLANGVPI---AIAP 405

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ED  R    D ++       ER  A+YQC A N+     ++A + VL   P        +
Sbjct: 406 EDPSRKVDGDTIIFSHVQ--ERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT--TTN 461

Query: 597 ETYAGEGGNVTIF-CNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDS 653
           + Y     +  +  C    +PKP+  W K   G+I+  G      +NG L I    +D +
Sbjct: 462 KLYQVIADSPALLDCAYFGSPKPEIEWFKGVKGSIL-RGNEYIFHDNGTLEIPVAQKDST 520

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           G Y+C A N  G  +++  L V   P+   + P    I  +  +   C    +  L    
Sbjct: 521 GTYTCVARNELGKIQNEVHLEV-KDPTMIIKQPEYKVIQRYGQVSFECIIKHDSTLLPTV 579

Query: 714 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           IW  +     N  L + E   +  D   L I N +  D G Y C+V +T+  +S    + 
Sbjct: 580 IWLKD-----NDALPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVLT 632

Query: 774 VEGPPGLPG----------GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--S 821
           V   P  P            +++    + S  + W  G  N  PIT++ I      +   
Sbjct: 633 VVAAPPTPAIIYARPNPPFDLELTGQLERSVELSWIPGDENNSPITNFVIEYEDGLHEPG 692

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
            W   +E V G          + +++  L P+  Y F+VIA NE+G  +PS PS QY T 
Sbjct: 693 VWHYQTE-VPG---------TQTTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTK 742

Query: 882 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKE 940
           +  P + PS + G G +  +L I+WE L   + N P + YK+ WR+K+ D E+ S  +  
Sbjct: 743 SANPDENPSNVQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVIV-- 800

Query: 941 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE-SEV 978
             NV   +V     F    YE+KVQA+ND+G  PE SEV
Sbjct: 801 -ANVSKYIVSGTPTF--VPYEIKVQALNDLGYAPEPSEV 836


>gi|335306706|ref|XP_003135542.2| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Sus scrofa]
          Length = 1257

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 207/824 (25%), Positives = 354/824 (42%), Gaps = 86/824 (10%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLID 244
           + + +P  +  +  +R ++   +DI+L C A G P   + W ++      ++     +  
Sbjct: 29  HHVMEPPVITEESPRRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQ 88

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRA 303
                 FT+ G N       Q    G+Y C ASNK G+ +S  +QL A G          
Sbjct: 89  APHSGSFTMEGNNSNFAQSFQ----GTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVK 144

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
           P    +     + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +
Sbjct: 145 PVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDN 203

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDKVR 418
             +Y C+     + T        L+V   ++      +L FP N           G  + 
Sbjct: 204 HSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHL--VALQGQPLV 261

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   + 
Sbjct: 262 LECIAEGFPTPTIKWLRLSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSD 321

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                ++++A P + +     H+    +     C+  G P    +W  NG       +P+
Sbjct: 322 RHVYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPV 373

Query: 537 ED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           E+     +Y I    L +  + P  D  + QC A+N+     ++A + V+ L P+    P
Sbjct: 374 EELAKDQKYRIHHGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVEL-PAKILTP 431

Query: 594 LESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRD 651
            ++ETY A +G    + C    AP P   W  K+G  +    R   + NG L I  +  +
Sbjct: 432 -DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 490

Query: 652 DSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAH 704
           D+G Y C A N      +    + K    +L GP S  E+   ++           C A+
Sbjct: 491 DTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFT--------CQAY 542

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            +  L  +  W  +G      DL EL ++    I+ G L I +  ++D G Y CV  + +
Sbjct: 543 FDSSLQHSITWRGDG-----QDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKL 597

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------I 814
             + ++  ++V G PG    ++V + H   ++   + W+    +  PI  Y I      +
Sbjct: 598 DVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEM 657

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
           A   W S         +GK     T    A+++  L P+  Y F+V A N+ G GEPS  
Sbjct: 658 APEKWYS---------LGKVPGNQTS---ATLK--LSPYVHYTFRVTAINKYGPGEPSPA 703

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           S    TP   P + P  + G G +  ++ ++W+PL     NAP + Y++ WR +      
Sbjct: 704 SETVVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAW 763

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            E +     V   ++ + +   +  YE+KVQA+N  G GPE ++
Sbjct: 764 QEQI-----VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQI 802


>gi|149036843|gb|EDL91461.1| rCG56047 [Rattus norvegicus]
          Length = 733

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 197/715 (27%), Positives = 301/715 (42%), Gaps = 59/715 (8%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKR---FTLSGGNLIINDPRQVEDRG 270
           + C A G P P + W K+D   D         LSD R   F  SG   I N+      +G
Sbjct: 54  IECEAKGNPEPKFSWTKDDKPFD---------LSDPRIIAFNNSGTFRIPNEGHISHFQG 104

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYY 329
            Y C ASN+ G+ ISE ++     + +F  ++   I  +     +  C+PP  +P ++ Y
Sbjct: 105 KYRCFASNRLGTAISEEIEFIVPGVPKFPKEKIEPIDVEEGDSIVLPCNPPKGHPPLHIY 164

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQS--KVSDTGRNGPFFPLK 387
           W        +E+D+RV++S  G LYF+ +E+ D+ N  C   +  K+    +  P   L 
Sbjct: 165 WMNIEL-EHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPKLRTIVQKMPM-KLT 222

Query: 388 VFPHSNFQQLKF-----PNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
           V   ++ +Q K      P        +    GD + LEC A G P P   W++ GS LP+
Sbjct: 223 VNSSNSIKQRKPKLLLPPAQIGSASSKTVLKGDTLLLECFAEGLPTPQIEWSKLGSELPK 282

Query: 443 N-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
             A  E   + L I NV  +D+G Y C A+N          + ++  P +          
Sbjct: 283 GRATIEIHEKTLKIENVSYQDRGNYRCTANNLLGKASHDFHVIVEEPPRWKKKPQSAVYS 342

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPE 557
             ++    CEA G P  T  W  NG       LP+E+     D  F ++  ++   L P 
Sbjct: 343 TGSNGILLCEAEGEPQPTIKWRVNG-------LPIENHPFPGDVMFPRE--ISFTNLQPN 393

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAP 616
              A+YQC A N   T  ++A + V+ + P  + +  E+ ET  G      + C   A+P
Sbjct: 394 HT-AVYQCEASNIHGTILANANIDVVDVVPLIQTKNEENYETVVGYSA--FLHCEYFASP 450

Query: 617 KPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           K   VW+  D      GGR    ENG L I   + +D+G YSC   N  G       L +
Sbjct: 451 KATVVWEVADETHPLEGGRYHTHENGTLEIERTTEEDAGSYSCWVDNTMGKAVITANLDI 510

Query: 676 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETP 733
            +  +     P    I     L+L C +  +  L   +   W+ +G      ++N  E  
Sbjct: 511 RNA-TKLRVFPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDG---EAFEMNGTEDG 566

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 793
            I IDG  L I+N S  D G Y C  ++ +   S KT V V G P  P  + + E    S
Sbjct: 567 RIVIDGANLTISNISGEDQGIYSCSAQTALDSTSEKTQVTVLGVPDPPRNLLLSERQNRS 626

Query: 794 ATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLV 851
             + W  G  +   I+ Y +    N      W         +E+ R  G +E  +   L 
Sbjct: 627 VRLSWEAGDDHNSKISEYIVEFEGNREEPGKW---------EELTRVRG-EETDVVLPLA 676

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
           P+  Y+F+V A NE+G    S PS  + TP   P + P  I     +  ++ I W
Sbjct: 677 PYVRYQFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQASQPKEMIIKW 731


>gi|335306708|ref|XP_003360545.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Sus scrofa]
          Length = 1253

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 207/824 (25%), Positives = 354/824 (42%), Gaps = 86/824 (10%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLID 244
           + + +P  +  +  +R ++   +DI+L C A G P   + W ++      ++     +  
Sbjct: 29  HHVMEPPVITEESPRRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVSQ 88

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRA 303
                 FT+ G N       Q    G+Y C ASNK G+ +S  +QL A G          
Sbjct: 89  APHSGSFTMEGNNSNFAQSFQ----GTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVK 144

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
           P    +     + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +
Sbjct: 145 PVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDN 203

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDKVR 418
             +Y C+     + T        L+V   ++      +L FP N           G  + 
Sbjct: 204 HSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHL--VALQGQPLV 261

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   + 
Sbjct: 262 LECIAEGFPTPTIKWLRLSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGSD 321

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                ++++A P + +     H+    +     C+  G P    +W  NG       +P+
Sbjct: 322 RHVYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPV 373

Query: 537 ED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           E+     +Y I    L +  + P  D  + QC A+N+     ++A + V+ L P+    P
Sbjct: 374 EELAKDQKYRIHHGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVEL-PAKILTP 431

Query: 594 LESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRD 651
            ++ETY A +G    + C    AP P   W  K+G  +    R   + NG L I  +  +
Sbjct: 432 -DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAN 490

Query: 652 DSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAH 704
           D+G Y C A N      +    + K    +L GP S  E+   ++           C A+
Sbjct: 491 DTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFT--------CQAY 542

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            +  L  +  W  +G      DL EL ++    I+ G L I +  ++D G Y CV  + +
Sbjct: 543 FDSSLQHSITWRGDG-----QDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKL 597

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------I 814
             + ++  ++V G PG    ++V + H   ++   + W+    +  PI  Y I      +
Sbjct: 598 DVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEM 657

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
           A   W S         +GK     T    A+++  L P+  Y F+V A N+ G GEPS  
Sbjct: 658 APEKWYS---------LGKVPGNQT---SATLK--LSPYVHYTFRVTAINKYGPGEPSPA 703

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 934
           S    TP   P + P  + G G +  ++ ++W+PL     NAP + Y++ WR +      
Sbjct: 704 SETVVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAW 763

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            E +     V   ++ + +   +  YE+KVQA+N  G GPE ++
Sbjct: 764 QEQI-----VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQI 802


>gi|145652526|gb|ABP88252.1| non-neural L1CAM [Homo sapiens]
          Length = 1248

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 204/806 (25%), Positives = 343/806 (42%), Gaps = 65/806 (8%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 31  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 90

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 91  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 146

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 147 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 205

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 206 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 263

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P + A ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 264 FPTPTIKWLRPSGPMPADRATYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 323

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 324 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 375

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 376 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 432

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N          L V    +   Q P          +   C A  +  L  +  W  +
Sbjct: 493 LAANDQNNVTIMANLKVTDA-TQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGD 551

Query: 719 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V G 
Sbjct: 552 G-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGS 606

Query: 778 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK- 833
           PG    + + ++H   ++   + W+    +  PI  Y I          F   E   GK 
Sbjct: 607 PGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDI---------EFEDKEMAPGKW 657

Query: 834 -EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
             + +  G + ++    L P+  Y F+V A N+ G GEPS  S    TP   P + P  +
Sbjct: 658 YSLGKVPGNQTSTTLK-LSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDV 716

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
            G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V    + + 
Sbjct: 717 KGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVS 771

Query: 953 SEFYYTEYEVKVQAINDVGPGPESEV 978
           +   +  YE+KVQA+N  G GPE +V
Sbjct: 772 NTSTFVPYEIKVQAVNSQGKGPEPQV 797


>gi|410335591|gb|JAA36742.1| L1 cell adhesion molecule [Pan troglodytes]
          Length = 1248

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 204/813 (25%), Positives = 346/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +   L    F
Sbjct: 31  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSLHSGSF 90

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 91  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 146

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 147 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 205

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 206 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 263

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 264 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 323

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 324 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 375

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 376 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 432

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 493 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 548

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 549 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 604 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 659

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 660 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 709

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 710 EKNPMDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 764

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 765 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 797


>gi|74200991|dbj|BAE37380.1| unnamed protein product [Mus musculus]
          Length = 410

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 205/405 (50%), Gaps = 27/405 (6%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D    GP F+++P+ V+F L        + LSC   G P P   W        ++    +
Sbjct: 20  DYTLHGPVFVQEPSHVMFPLDSEE--KKVKLSCEVKGNPKPHIRW--------KINGTDV 69

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D   D R+++  G+L+IN+P + +D G+Y C A+N FG+I+S   +L F ++  F  +  
Sbjct: 70  DIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTR 129

Query: 304 PEIG-NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
             +   +  G  + C PP +   ++Y W  + +P++  +D R FVS + G LY + +E+ 
Sbjct: 130 STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKS 187

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D GNY+C V + V++    GP  PL +       +   K    FP+T P   + G  V+L
Sbjct: 188 DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA--EKGTTVKL 245

Query: 420 ECVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           EC A G PVP+  W R  G P+ R A     N IL IPN + ED G Y C A N R    
Sbjct: 246 ECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNV 305

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
           +   ++  A+PN+   + D H+  +  + W C+A G P  TY W +NG+       PL  
Sbjct: 306 AKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGD-------PLLT 358

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
           +DR  I+   L I  +N   D  MYQC A+N+    +SSA+L V+
Sbjct: 359 RDRIQIEQGTLNITIVNLS-DAGMYQCVAENKHGVIFSSAELSVI 402



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 148/382 (38%), Gaps = 44/382 (11%)

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRAS 471
           KV+L C   G P P   W   G+ +     F     + + ++  PN K +D G Y C A+
Sbjct: 45  KVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPN-KTQDAGTYQCIAT 103

Query: 472 NDRSALES-SVTISIQAEPNF-TIPLTDKHMDNQADLTWTCEAFGVP----DVTYSWFRN 525
           N    + S    +      NF T   +   +     +   C   G P    +++Y+W  N
Sbjct: 104 NSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLC---GPPPHSGELSYAWIFN 160

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLT 584
                    P    +R F+      +     E+ D   Y C   N +           L 
Sbjct: 161 -------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLI 213

Query: 585 LK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGR 634
           L+         P  + +  E+   A +G  V + C     P P  +W++ DG  I    R
Sbjct: 214 LRNDGVMGEYEPKIEVQFPET-VPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKAR 272

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
           R    NG L I    ++D+G Y C A N  G + +KG+L     P++  Q+   I +A  
Sbjct: 273 RHK-SNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAME 330

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
            ++   C A+        Y W  NG  +   D        I I+ G L IT  + +DAG 
Sbjct: 331 ESVFWECKANGRP--KPTYRWLKNGDPLLTRD-------RIQIEQGTLNITIVNLSDAGM 381

Query: 755 YECVVKSTVGKISTKTTVIVEG 776
           Y+CV ++  G I +   + V G
Sbjct: 382 YQCVAENKHGVIFSSAELSVIG 403



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 137/345 (39%), Gaps = 38/345 (11%)

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           + +Q   +   PL  +    +  +  +CE  G P     W  NG  ++     +    RY
Sbjct: 27  VFVQEPSHVMFPLDSE----EKKVKLSCEVKGNPKPHIRWKINGTDVD-----IGMDFRY 77

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAG 601
            + D  L I   N  +D   YQC A N   T  S  A+L+   L+ +FK R   S     
Sbjct: 78  SVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVR 135

Query: 602 EGGNVTIFCN-PEAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCT 659
            G  + + C  P  + +  + W  +        RR +  E GNL I+ V + D G Y+C 
Sbjct: 136 RGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCV 195

Query: 660 ATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------TIAAHR--NLQLRCSAHTEELL 709
            TN     +  G    ++L       +  PKI      T+ A +   ++L C A    + 
Sbjct: 196 VTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVP 255

Query: 710 DVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
            +  +W   +G  I             +   G+LEI N    DAG YECV +++ GK   
Sbjct: 256 TI--LWRRADGKPIA-------RKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVA 306

Query: 769 KTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGRPITHYK 812
           K  +     P     VQ++ ++H       + +   NGRP   Y+
Sbjct: 307 KGQLTFYAQPNW---VQIINDIHVAMEESVFWECKANGRPKPTYR 348



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 11/139 (7%)

Query: 350 DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE 409
           +G L     +Q DAG+Y C  ++     G+N     L  +   N+ Q+   N+      E
Sbjct: 277 NGILEIPNFQQEDAGSYECVAEN---SRGKNVAKGQLTFYAQPNWVQII--NDIHVAMEE 331

Query: 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           +      V  EC A G P P+Y W + G PL      +     L I  V + D G Y C 
Sbjct: 332 S------VFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 385

Query: 470 ASNDRSALESSVTISIQAE 488
           A N    + SS  +S+  E
Sbjct: 386 AENKHGVIFSSAELSVIGE 404


>gi|355559497|gb|EHH16225.1| hypothetical protein EGK_11478 [Macaca mulatta]
          Length = 1225

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 197/752 (26%), Positives = 322/752 (42%), Gaps = 60/752 (7%)

Query: 254 SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAF-GFIGEFNLKRAPEIGNQNWG 312
           SG   I N+      +G Y C ASNK G  +SE ++      + +F  ++   +  +   
Sbjct: 89  SGTFRIPNEGHISHFQGKYRCFASNKLGIAMSEEIEFIVPTGVPKFPKEKIDPLEVEEGD 148

Query: 313 KAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQ 371
             +  C+PP   P ++ YW      + +E+D+RV++S  G LYF+ +E+ D+ N  C   
Sbjct: 149 PIVLPCNPPKGLPPLHIYWMNIELEH-IEQDERVYMSQKGDLYFANVEEKDSRNDYCCFA 207

Query: 372 S--KVSDTGRNGPF-FPLKVFPHSN--------------FQQLKFPNNFPKTFPEA---- 410
           +  ++    +  P    +    H+N               +Q K     P T        
Sbjct: 208 AFPRLRTIVQKMPMKLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGRGGFF 267

Query: 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF-ENFNRILTIPNVKVEDQGEYICR 469
            K G    L  +   +P P  +W + G  LP+     EN+ + L I NV  +D+G Y C 
Sbjct: 268 KKKGKPCCLSVLLKAWPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCT 327

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           ASN          + ++  P +T           ++    CEA G P  T  W  NG  +
Sbjct: 328 ASNFLGTATHDFHVIVEEPPRWTKKPQSAVYSTGSNGILLCEAEGEPQPTIKWRVNGSPI 387

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           ++        D  F ++  ++   L P    A+YQC A N   T  +SA + V+ ++P  
Sbjct: 388 DNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASNVHGTILASANVDVVDVRPLI 441

Query: 590 KKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISP 647
           + +  + E YA   G +  + C   A+P+    W+K        GRR  +++NG L I+ 
Sbjct: 442 QTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINR 499

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
            + +D+G YSC   N  G       L + +  +     P    I     L+L C +  + 
Sbjct: 500 TTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDL 558

Query: 708 LL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 765
            L   +   W+ +G      ++N  E   I IDG  L I+N +  D G Y C   + +  
Sbjct: 559 HLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDS 615

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STW 823
            +  T V V   P  P  + + E    S  + W  G  +   I+ Y +    N      W
Sbjct: 616 AADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW 675

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
                    +E+ R  G+K   I   L P+  Y+F+VIA NE+G  +PS PS  + TP  
Sbjct: 676 ---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPA 725

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYG 942
            P + P  I     +  ++ I WEPL   +QN P + Y++ W+ +    E++ ET+  + 
Sbjct: 726 APDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH- 784

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
                 +R+ +   Y  Y+VKVQAIN +G GP
Sbjct: 785 -----TLRVMTPAVYAPYDVKVQAINQLGSGP 811



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 228/597 (38%), Gaps = 79/597 (13%)

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNAYFEN--FNRILTIPNVKVEDQGEYICRASNDRSA 476
           L C A G P P+  W   GSP+  + +  +  F R ++  N++      Y C ASN    
Sbjct: 366 LLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASNVHGT 425

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-----WTCEAFGVPDVTYSWFRNGELLNS 531
           + +S  + +    +    +  K  +N A +        CE F  P+   SW +       
Sbjct: 426 ILASANVDVV---DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKV-----E 477

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA--------QLRVL 583
           E  PLE + RY + DN         E D   Y C  +N +     +A        QLRV 
Sbjct: 478 EAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATQLRVS 536

Query: 584 TLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIFE 639
              P   K   LE    +         C+       K  W KDG    I G+   R I +
Sbjct: 537 PKNPRIPKLHMLELHCESK--------CDLHLKHSLKLSWSKDGEAFEINGTEDGRIIID 588

Query: 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 699
             NL IS V+ +D GIY C+A           ++ VL  P   E L   ++   +R+++L
Sbjct: 589 GANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENL--HLSERQNRSVRL 646

Query: 700 RCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
              A  +   +++ YI    G +       EL          +L +  A F    ++  +
Sbjct: 647 SWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGKKTTVILPL--APFVRY-QFRVI 703

Query: 759 VKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHY 811
             + VG+   ++ +   E PP  P      ++V         I+W          P   Y
Sbjct: 704 AVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 763

Query: 812 KIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP--WSTYEFKVIAGNELG 867
           ++        TW      V  +E  V  +T R       V+ P  ++ Y+ KV A N+LG
Sbjct: 764 RV--------TWKPQGAPVEWEEETVTNHTLR-------VMTPAVYAPYDVKVQAINQLG 808

Query: 868 YGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            G    P+PQ  T     D P  AP   G        + ++W  +P+++ +     Y+I 
Sbjct: 809 SG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQIN 864

Query: 925 WRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPESE 977
           W K           KE   +  +  R    +PS   ++E+ + V A N  G GPESE
Sbjct: 865 WWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESE 921


>gi|126336357|ref|XP_001373792.1| PREDICTED: neural cell adhesion molecule L1-like protein
           [Monodelphis domestica]
          Length = 1224

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 207/835 (24%), Positives = 344/835 (41%), Gaps = 79/835 (9%)

Query: 180 IENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           IE P  + + P   +Q T  V F   +          C A G P P++ W K +      
Sbjct: 23  IEIPISVKQVPTITEQSTVQVAFPFDEY-----FQFVCEAKGNPEPTFHWTKNE------ 71

Query: 239 VANLIDPLSDKRFTLS---GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
                  LSD R   S   G   I+N+      +G Y C ASN+ G+ +S+ ++     +
Sbjct: 72  --EQFSLLSDPRIISSNNTGTFKILNEGHITHFQGKYRCFASNELGTAMSDEIEFIVPNV 129

Query: 296 GEF-NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
            +F   K  P    +     + C+PP   P ++ YW        + +D+RV++S  G LY
Sbjct: 130 PKFPKEKIEPLEVEEGNSIVLHCNPPKGIPPLHIYWMNIDL-QHIPQDERVYMSQKGDLY 188

Query: 355 FSALEQIDAGNYSCNVQS--KVSDTGRNGPF-FPLKVFPHSN-----FQQLKFPNNFPKT 406
           F+ +E+ D+ N  C   +  ++    +  P    +    H+N      Q +   N   + 
Sbjct: 189 FANVEENDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSLKHANDSSSHRQNVTKANVIKQR 248

Query: 407 FPEA---PKA-----------GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF-ENFNR 451
            P     P+            G  + LEC A G P P   W + G  LP+     ENF +
Sbjct: 249 EPRMLLPPETSGSHSSITIIKGGTLLLECFAEGLPTPQITWKKVGEDLPKGRETQENFGK 308

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE 511
            L I  V   D+G Y C A N +        ++++  P +T           ++    CE
Sbjct: 309 TLKIEQVTHMDKGHYHCMAKNYKGTAIHEFRVTVEEPPRWTKKPESAVYSIGSNGILLCE 368

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQL 571
           A G P     W  NG  ++   LP      +F  +   +   LN      +YQC A N  
Sbjct: 369 AEGEPAPEIEWKINGLPIDKHPLP---GIVFFPGEISFSNVQLN---HTGVYQCEATNVH 422

Query: 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG- 630
               ++A + VL + P   + P +    A  G +  + C   A+P     W++   +   
Sbjct: 423 GKILATANINVLDIAP-LMQTPDDEGYAAVVGYSAFLLCEVFASPPAVITWQRPSKVERL 481

Query: 631 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY-YEQLPPKI 689
            G     + NG L I   +++D+G Y+C   +  G       L +    +     L P +
Sbjct: 482 EGSHYTTYPNGTLEIKETTKEDAGPYTCWVKSPRGEVAVTAHLTIRDATNLTVSPLNPHV 541

Query: 690 TIAAHR---NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
            I +H    +  + C +H +  L ++  W+ +G     +++N  E   I IDG  L I+N
Sbjct: 542 -IRSHLLVLHCDIECDSHLKHSLKLS--WSKDGEA---LEINGTEDVRIIIDGDKLTISN 595

Query: 747 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
            +  D G Y C+  + + +    T V +   P  P  V + E    S  + W  G  +  
Sbjct: 596 ITLEDEGLYACLANTALDRAMATTQVTILDVPDPPENVYLSERQNRSVRLSWEAGDNHNS 655

Query: 807 PITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 864
            IT + I    N +    W          E+ +  G +  ++ + L P+  Y+F+V   N
Sbjct: 656 AITEFIIEFEGNRDEPGKW---------AELTKVQGNETTALLS-LAPYVRYQFRVRGVN 705

Query: 865 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924
            +G   PSSPS  + TP   P + P  I     +  ++ I WEPL   +QN P + Y++ 
Sbjct: 706 AVGRSIPSSPSDYHETPPAAPDKNPENIRVEASQPKEMFIKWEPLNSMEQNGPGLEYRVT 765

Query: 925 WRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           WR++   +E+  E   +        +R+ +   +T Y+VKVQAIN +G GPE + 
Sbjct: 766 WRQQGVPSEWSDELATD------NTLRVMTSSVFTPYDVKVQAINQLGSGPEPQT 814



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 185/805 (22%), Positives = 289/805 (35%), Gaps = 103/805 (12%)

Query: 212  ITLSCYAGGYPNPSYEWFK--EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
            + L C+A G P P   W K  ED  + R         + + F   G  L I     + D+
Sbjct: 273  LLLECFAEGLPTPQITWKKVGEDLPKGRE--------TQENF---GKTLKIEQVTHM-DK 320

Query: 270  GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYY 329
            G YHC A N  G+ I E  ++       +  K    + +      + C+     P     
Sbjct: 321  GHYHCMAKNYKGTAIHE-FRVTVEEPPRWTKKPESAVYSIGSNGILLCEA-EGEPAPEIE 378

Query: 330  WARDYFPNFVEEDKRVF---VSYDGALYFSALEQIDAGNYSC---NVQSKVSDTGRNGPF 383
            W  +  P     DK      V + G + FS ++    G Y C   NV  K+  T      
Sbjct: 379  WKINGLPI----DKHPLPGIVFFPGEISFSNVQLNHTGVYQCEATNVHGKILATAN---- 430

Query: 384  FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR--RGSPLP 441
              + V   +   Q       P     A   G    L C  F  P     W R  +   L 
Sbjct: 431  --INVLDIAPLMQT------PDDEGYAAVVGYSAFLLCEVFASPPAVITWQRPSKVERLE 482

Query: 442  RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
             + Y    N  L I     ED G Y C   + R  +  +  ++I+   N T+   + H+ 
Sbjct: 483  GSHYTTYPNGTLEIKETTKEDAGPYTCWVKSPRGEVAVTAHLTIRDATNLTVSPLNPHVI 542

Query: 502  NQADLTW----TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 557
                L       C++     +  SW ++GE L  E    ED  R  I  + LTI  +  E
Sbjct: 543  RSHLLVLHCDIECDSHLKHSLKLSWSKDGEAL--EINGTEDV-RIIIDGDKLTISNITLE 599

Query: 558  RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 617
             D  +Y C A   L    ++ Q+ +L +       P E+  Y  E  N ++  + EA   
Sbjct: 600  -DEGLYACLANTALDRAMATTQVTILDVP-----DPPEN-VYLSERQNRSVRLSWEAGDN 652

Query: 618  -----PKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG 671
                  +F+ + +GN    G   ++ +  GN   + +S      Y      V+ +  S  
Sbjct: 653  HNSAITEFIIEFEGNRDEPGKWAELTKVQGNETTALLSLAPYVRYQFRVRGVNAVGRS-- 710

Query: 672  RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL---------------LDVAYIWT 716
               +   PS Y + PP        N+++  S   E                 L+    W 
Sbjct: 711  ---IPSSPSDYHETPPAAPDKNPENIRVEASQPKEMFIKWEPLNSMEQNGPGLEYRVTWR 767

Query: 717  HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 774
              GV     D  EL T N       L +  +S     + +    + +G      T+ V  
Sbjct: 768  QQGVPSEWSD--ELATDNT------LRVMTSSVFTPYDVKVQAINQLGSGPEPQTITVYS 819

Query: 775  --EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
              + P   P  V    ++ T   + W D     R   H K   + NW  T   + E    
Sbjct: 820  GEDYPDAAPLSVTTRVINSTLINVTW-DRIPKERVHGHLKGY-QINWWKTKSRLDERKFP 877

Query: 833  KEVD--RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
            KE+   R  G +   +   L P+S ++  V+A N  G G  SSP   + TP   P Q P+
Sbjct: 878  KEIQTIRLPGDRSYGMVPSLDPFSEFKLTVLAYNSKGAGPESSPI-SFQTPEGVPEQ-PN 935

Query: 891  RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG--NVGIAV 948
             +         + +SW  LP+ K +     Y + ++  NDT+   E LKE    N     
Sbjct: 936  FLKVIHVDKNTVVLSWG-LPK-KAHGNLTGYSLQYQIINDTDEIGE-LKEINITNPSKLS 992

Query: 949  VRIPSEFYYTEYEVKVQAINDVGPG 973
             R+P     T+Y+  ++A    G G
Sbjct: 993  WRVPDLNSTTKYKFYLRACTSKGCG 1017



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 137/593 (23%), Positives = 220/593 (37%), Gaps = 73/593 (12%)

Query: 419 LECVAFGYPVPSYNWTRRG-----SPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           L C A G P P   W   G      PLP   +F      ++  NV++   G Y C A+N 
Sbjct: 365 LLCEAEGEPAPEIEWKINGLPIDKHPLPGIVFFPGE---ISFSNVQLNHTGVYQCEATNV 421

Query: 474 RSALESSVTISI-QAEPNFTIPLTDKHMDNQADLTWT-CEAFGVPDVTYSWFRNGELLNS 531
              + ++  I++    P    P  + +        +  CE F  P    +W R      S
Sbjct: 422 HGKILATANINVLDIAPLMQTPDDEGYAAVVGYSAFLLCEVFASPPAVITWQRP-----S 476

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV-----LTLK 586
           +   LE        +  L I+    E D   Y C  K+       +A L +     LT+ 
Sbjct: 477 KVERLEGSHYTTYPNGTLEIKETTKE-DAGPYTCWVKSPRGEVAVTAHLTIRDATNLTVS 535

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII---GSGGRRKIFENGNL 643
           P      + S        +  I C+       K  W KDG  +   G+   R I +   L
Sbjct: 536 P-LNPHVIRSHLLVL---HCDIECDSHLKHSLKLSWSKDGEALEINGTEDVRIIIDGDKL 591

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
            IS ++ +D G+Y+C A        +  ++ +L  P      P  + ++  +N  +R S 
Sbjct: 592 TISNITLEDEGLYACLANTALDRAMATTQVTILDVPD----PPENVYLSERQNRSVRLSW 647

Query: 704 HTEELLDVA---YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
              +  + A   +I    G R       EL     N    LL     S A    Y+  V+
Sbjct: 648 EAGDNHNSAITEFIIEFEGNRDEPGKWAELTKVQGNETTALL-----SLAPYVRYQFRVR 702

Query: 761 --STVGK-ISTKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TDGATNGRPITHY 811
             + VG+ I +  +   E PP  P      ++V         I+W   +      P   Y
Sbjct: 703 GVNAVGRSIPSSPSDYHETPPAAPDKNPENIRVEASQPKEMFIKWEPLNSMEQNGPGLEY 762

Query: 812 KIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
           ++  R     S W   S+ +      R          +V  P   Y+ KV A N+LG G 
Sbjct: 763 RVTWRQQGVPSEW---SDELATDNTLR------VMTSSVFTP---YDVKVQAINQLGSG- 809

Query: 871 PSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
              P PQ  T     D P  AP  +         ++++W+ +P+E+ +     Y+I W K
Sbjct: 810 ---PEPQTITVYSGEDYPDAAPLSVTTRVINSTLINVTWDRIPKERVHGHLKGYQINWWK 866

Query: 928 KNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQAINDVGPGPES 976
                 + +  KE   + +   R    +PS   ++E+++ V A N  G GPES
Sbjct: 867 TKSRLDERKFPKEIQTIRLPGDRSYGMVPSLDPFSEFKLTVLAYNSKGAGPES 919


>gi|113679606|ref|NP_001038270.1| neuronal cell adhesion molecule precursor [Danio rerio]
          Length = 1285

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 218/832 (26%), Positives = 342/832 (41%), Gaps = 77/832 (9%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +E P  +P+ P    Q P D + D  +     +I + C A G P+PS+ W +        
Sbjct: 30  LEVPLDLPQPPTITNQSPKDYIIDPRE-----NINIFCEAKGKPHPSFSWTRN------- 77

Query: 239 VANLIDPLSDKRFTL--SGGNLIINDPRQVED--RGSYHCKASNKFGSIISESVQLAFGF 294
                D   D +  +    GNL+I+   +  +   G Y C A N+ GS +S ++ +    
Sbjct: 78  -GTHFDVEKDPKVVMMPGTGNLVIDISGEKAEVYEGVYQCIARNEHGSAVSNNIVIRQSR 136

Query: 295 IGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
              ++ ++   I  Q     +  C PP   P    +W  + F   + ++ RV  + +G L
Sbjct: 137 SPLWSKEKNEPITVQRGTSLILQCRPPAGLPPPIIFWMDNNF-QRLPQNSRVSQALNGDL 195

Query: 354 YFSALEQIDAGN-YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP-----NNFPKTF 407
           YFS +   D  N Y C  +   + T +      +KV                 ++F    
Sbjct: 196 YFSNVIMEDTRNDYICYARFPHTQTIQQKQPITVKVLDIEAMNDTVLAAFLNGSDFWGDS 255

Query: 408 PEAPKA-----------------GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-FENF 449
           P   +                  GD + LEC+A G P P+ +WT+    LP   + F +F
Sbjct: 256 PSGERVPSFLHPPGMESTTMVLKGDTLELECIADGLPTPNISWTKVNGELPSGRFSFYSF 315

Query: 450 NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWT 509
            + L I  V   D G+Y C A N   + + ++T+ ++A P +     +  +  +     T
Sbjct: 316 QKTLKIKEVTEADGGDYRCIAKNRMGSSQHTITVVVRAAPFWISAPQNLILAPKETGNLT 375

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
           C+  G P  T +W  NG  + S      D  R  + D V+T+  +      A+YQC A N
Sbjct: 376 CDVDGNPKPTITWSVNGNPIESSH---NDPSRK-VSDGVITLSDVQTGSS-AVYQCNASN 430

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 629
                 ++A + VL   P      L  E          + C    +P PK  W KD   I
Sbjct: 431 DYGYLLANAFVSVLAEPPRVLTS-LNHEYSVISNSRALLDCASFGSPLPKITWFKDSQSI 489

Query: 630 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
            +     I +NG L I+     +SG Y+C A+N  G  E+   L V   P+   + P   
Sbjct: 490 LNSDLYHIHKNGTLEINVAQPQNSGKYTCIASNNLGNKENHVHLQVKE-PTRIIRQPEYK 548

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNAS 748
            +  +      C    +  L  + IW          D  EL + P   +    L I + +
Sbjct: 549 EVQRNSIAVFECKVKHDPTLIPSMIWLK--------DNGELPDDPRFEVGSDSLTIHDVT 600

Query: 749 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 808
             D G Y C+  +T+ + S   T+ V   P  P  +++ +  + S  + WT G  +  PI
Sbjct: 601 EDDEGTYTCIRNTTLDQDSASATLTVVEQPDPPTDLELTDQRERSVRLTWTPGDEHNSPI 660

Query: 809 THYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 866
             + I    + +    W N++E V G           A +E  L P+  Y F+V+A N +
Sbjct: 661 KLFLIQYEDSLHEPGVWLNMTE-VSGTST-------TAQLE--LSPYVYYSFRVLALNGV 710

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
           G  E S PS QY T   KP   PS +   G     ++ISW  L   + N P + YK+ WR
Sbjct: 711 GLSESSDPSRQYRTNPAKPDVNPSDVEVSGTSPDTMTISWRELSGLESNGPGLQYKVSWR 770

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            K+  ++ + TL    NV   VV     F  T YEV VQA+ND G GP  EV
Sbjct: 771 MKDAEQWTTVTL---ANVSQHVVTGTPTF--TLYEVTVQAVNDYGEGPRPEV 817



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 152/684 (22%), Positives = 259/684 (37%), Gaps = 126/684 (18%)

Query: 346 FVSYDGALYFSALEQIDAGNYSC-------NVQSKVSDTGRNGPFFPLKVFPHSNFQQLK 398
           F S+   L    + + D G+Y C       + Q  ++   R  PF+              
Sbjct: 312 FYSFQKTLKIKEVTEADGGDYRCIAKNRMGSSQHTITVVVRAAPFW-------------- 357

Query: 399 FPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP---RNAYFENFNRILTI 455
              + P+    APK  +   L C   G P P+  W+  G+P+     +   +  + ++T+
Sbjct: 358 --ISAPQNLILAPK--ETGNLTCDVDGNPKPTITWSVNGNPIESSHNDPSRKVSDGVITL 413

Query: 456 PNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD--NQADLTWTCEAF 513
            +V+      Y C ASND   L ++  +S+ AEP   +   +      + +     C +F
Sbjct: 414 SDVQTGSSAVYQCNASNDYGYLLANAFVSVLAEPPRVLTSLNHEYSVISNSRALLDCASF 473

Query: 514 GVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQL 571
           G P    +WF++ + +LNS        D Y I  N  L I    P+ +   Y C A N L
Sbjct: 474 GSPLPKITWFKDSQSILNS--------DLYHIHKNGTLEINVAQPQ-NSGKYTCIASNNL 524

Query: 572 KTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPK--PKFVWK 623
             + +   L+V     +  +P +K+          +  ++ +F C  +  P   P  +W 
Sbjct: 525 GNKENHVHLQVKEPTRIIRQPEYKEV---------QRNSIAVFECKVKHDPTLIPSMIWL 575

Query: 624 KDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           KD   +    R   FE G+  L I  V+ DD G Y+C        D +   L V+  P  
Sbjct: 576 KDNGELPDDPR---FEVGSDSLTIHDVTEDDEGTYTCIRNTTLDQDSASATLTVVEQPDP 632

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTE-----ELLDVAY--------IWTHNGVRIGNMDLN 728
              L  ++T    R+++L  +   E     +L  + Y        +W +     G     
Sbjct: 633 PTDL--ELTDQRERSVRLTWTPGDEHNSPIKLFLIQYEDSLHEPGVWLNMTEVSGTSTTA 690

Query: 729 ELE-TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 787
           +LE +P +     +L +     +++ +     ++   K           P   P  V+V 
Sbjct: 691 QLELSPYVYYSFRVLALNGVGLSESSDPSRQYRTNPAK-----------PDVNPSDVEVS 739

Query: 788 EVHKTSATIQWTD--GATNGRPITHYKIIART----NWNS-TWFNVSEHVIGKEVDRYTG 840
                + TI W +  G  +  P   YK+  R      W + T  NVS+HV+       TG
Sbjct: 740 GTSPDTMTISWRELSGLESNGPGLQYKVSWRMKDAEQWTTVTLANVSQHVV-------TG 792

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGG 897
                       ++ YE  V A N+ G G    P P+     +  + P  AP  +     
Sbjct: 793 TPT---------FTLYEVTVQAVNDYGEG----PRPEVVLGYSGENSPTVAPENVKVSVQ 839

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI-----AVVRIP 952
              +  + WE +P          YK+ ++K      Q +  +E   V I      V R+P
Sbjct: 840 SGTEAEVHWEAVPLSSVRGRLKGYKVTYQKMRSLHKQ-DYDRENPQVLIFSGEETVGRLP 898

Query: 953 SEFYYTEYEVKVQAINDVGPGPES 976
               Y+ Y + ++A N  G GP S
Sbjct: 899 DLHPYSHYRLNIRAFNGHGDGPSS 922


>gi|335306710|ref|XP_003360546.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Sus scrofa]
          Length = 1248

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 208/825 (25%), Positives = 354/825 (42%), Gaps = 86/825 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLI 243
           P  + +P  +  +  +R ++   +DI+L C A G P   + W ++      ++     + 
Sbjct: 23  PEELMEPPVITEESPRRVVVFPTDDISLKCEASGKPAVQFRWTRDGVHFKPKEEPGVTVS 82

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKR 302
                  FT+ G N       Q    G+Y C ASNK G+ +S  +QL A G         
Sbjct: 83  QAPHSGSFTMEGNNSNFAQSFQ----GTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETV 138

Query: 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQI 361
            P    +     + C PP +   +  YW      + +++D+RV +  +G LYF+  L   
Sbjct: 139 KPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSD 197

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDKV 417
           +  +Y C+     + T        L+V   ++      +L FP N           G  +
Sbjct: 198 NHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRRPRLLFPTNSSSHL--VALQGQPL 255

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +
Sbjct: 256 VLECIAEGFPTPTIKWLRLSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYHCLAENPLGS 315

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLP 535
                 ++++A P + +     H+    +     C+  G P    +W  NG       +P
Sbjct: 316 DRHVYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IP 367

Query: 536 LED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
           +E+     +Y I    L +  + P  D  + QC A+N+     ++A + V+ L P+    
Sbjct: 368 VEELAKDQKYRIHHGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVEL-PAKILT 425

Query: 593 PLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSR 650
           P ++ETY A +G    + C    AP P   W  K+G  +    R   + NG L I  +  
Sbjct: 426 P-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQA 484

Query: 651 DDSGIYSCTATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSA 703
           +D+G Y C A N      +    + K    +L GP S  E+   ++           C A
Sbjct: 485 NDTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFT--------CQA 536

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKST 762
           + +  L  +  W  +G      DL EL ++    I+ G L I +  ++D G Y CV  + 
Sbjct: 537 YFDSSLQHSITWRGDG-----QDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTK 591

Query: 763 VGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------ 813
           +  + ++  ++V G PG    ++V + H   ++   + W+    +  PI  Y I      
Sbjct: 592 LDVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKE 651

Query: 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
           +A   W S         +GK     T    A+++  L P+  Y F+V A N+ G GEPS 
Sbjct: 652 MAPEKWYS---------LGKVPGNQT---SATLK--LSPYVHYTFRVTAINKYGPGEPSP 697

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
            S    TP   P + P  + G G +  ++ ++W+PL     NAP + Y++ WR +     
Sbjct: 698 ASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGA 757

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             E +     V   ++ + +   +  YE+KVQA+N  G GPE ++
Sbjct: 758 WQEQI-----VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQI 797


>gi|403306865|ref|XP_003943940.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Saimiri
           boliviensis boliviensis]
          Length = 1248

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 206/813 (25%), Positives = 342/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      +D L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQAPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GVYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +      ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEAGNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A  G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 498 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 553

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + V ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 609 VGSPGSVPWLAVSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 715 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQV 802


>gi|432942191|ref|XP_004082977.1| PREDICTED: neuronal cell adhesion molecule-like [Oryzias latipes]
          Length = 1264

 Score =  220 bits (560), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 214/820 (26%), Positives = 348/820 (42%), Gaps = 88/820 (10%)

Query: 181 ENPDKIPRGPYF-IKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLV 239
           E P  +P+ P   ++ P D +FD  +      I + C A G P PS+ W +         
Sbjct: 19  EVPLDLPQPPTITLQSPKDYIFDPREH-----IIIHCEAKGNPQPSFRWARN-------- 65

Query: 240 ANLIDPLSDKRFTLSGG----NLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
               D  SD +  ++ G    ++ I   +     G+Y C A N+ G  ++  + +     
Sbjct: 66  GTDFDVKSDSKIVMNPGSGTLDIDIIGGKAEAYEGTYQCTAENEHGKALTNKIVIRQSRS 125

Query: 296 GEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
             +  +R   +  Q     +  C PP   P    +W  + F   ++ D+RV  + +G LY
Sbjct: 126 PLWPKERNEAMVRQKGAPLVLRCQPPAGLPPPVIFWMDNNF-QRLQLDERVSQALNGDLY 184

Query: 355 FSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413
           FS +   DA  +Y C  +   + T +      + V   +N Q  + P     + P + K 
Sbjct: 185 FSNVLPEDARDDYICYARFPHTQTIQQKQPISVVVL-DNNPQGERRPRILLPSEPTSTKM 243

Query: 414 ---GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQGEYICR 469
              G  ++LEC+A G P P  +W + G  LP N     NF +IL I +V   D G+Y C 
Sbjct: 244 VLKGVLLQLECIAEGLPTPDVSWQKVGGELPNNRMALHNFGKILQISDVSESDAGDYRCT 303

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           A N    +   + ++++A P +     +  +        TC   G P    SWF NG   
Sbjct: 304 AKNKLGLVHHVIKVAVKAAPFWISAPKNLILAPNETGILTCRVNGSPKPKISWFVNG--- 360

Query: 530 NSETLPLE----DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
               +P+E    D+ R   +D V+           A+YQC A N+     ++A + VL  
Sbjct: 361 ----VPIENAAADRSRKVDEDTVIISNVQIGSS--AVYQCNASNEFGYVMANAFVSVLAE 414

Query: 586 KPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNL 643
            P     P  ++ Y           C+   +P P   W KDG I I +G +  I ENG L
Sbjct: 415 PPKMLTPP--NQVYQVITNRPAFLDCSSFGSPIPTISWFKDGRISIENGDQYVIHENGTL 472

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR--C 701
            I      ++G Y+C ATN  GM E+   L V       EQ  PK  +   R +  R  C
Sbjct: 473 EIMVAQVLNTGKYTCVATNNLGMRENSVNLEVKEPTRILEQ--PKYKV-VQRGMSARFDC 529

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
               ++ L     W  +   +   D    + P+  +   +               C+   
Sbjct: 530 KVKHDKSLIPIMTWLKDRGELP--DDERYKRPSQGVSQTMT--------------CLF-- 571

Query: 762 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN- 820
               + + +T  +   P  P  +++ +  + S  + WT G  N  PI  + +    + + 
Sbjct: 572 ----LHSHSTATLLRKPDPPTDLELTDQAERSVQLTWTPGDENNSPILSFLVQYEDSLHH 627

Query: 821 -STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
              W N++      EVD   G K  + +  L P+  Y F+V+A N +GY EPS+PS QY 
Sbjct: 628 KGLWVNLT------EVD---GSK-TTTQLELSPYVYYSFRVLARNNVGYSEPSNPSSQYR 677

Query: 880 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETL 938
           T    P + PS + G G K  ++ ISW PL   + N P + YK+ W++++ D  + S+ +
Sbjct: 678 TNPAAPDENPSNVQGVGTKPDNMVISWMPLTGYQANGPGLKYKVHWKRRDMDESWSSQNV 737

Query: 939 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            +     + V   P+   Y  YE+KVQA+ND G GP+ E+
Sbjct: 738 VDKSQ--LVVDGTPT---YVPYEIKVQALNDYGNGPDPEI 772


>gi|338729750|ref|XP_001491834.3| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like [Equus caballus]
          Length = 1284

 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 203/813 (24%), Positives = 349/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W  +      ++ L   +        F
Sbjct: 63  VITEQSPRRLVVFPTDDISLKCEASGKPEVEFRWTHDGVHFKPKEELGVTVHQEPHSGSF 122

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW 311
           T++G N       Q    G+Y C ASNK G+ +S  +QL      ++  +    +  +  
Sbjct: 123 TITGNNSNFAQRFQ----GTYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVEEG 178

Query: 312 GKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
              +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y CN
Sbjct: 179 ESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICN 237

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 238 AHFPGTRTIIQKEPIDLRVKATNSMISRKPRLLFPTNSSSHL--VALQGQPLILECIAEG 295

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +   +  ++
Sbjct: 296 FPTPTIKWLRPSGPMPSDRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVT 355

Query: 485 IQAEPNFTIPLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    + +   C+  G P    +W  NG       +P+E+     
Sbjct: 356 VEAAP-YWLQKPQSHLYGPGETVRLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 407

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L P+    P ++ETY 
Sbjct: 408 KYRIQRGALILSNIQPS-DTMVTQCEARNRHGVLLANAYIYVVQL-PAKILTP-DNETYM 464

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A EG    + C    AP P   W  K+G  +    R   + +G L I  +  +D+G Y C
Sbjct: 465 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTDGTLGIRDLQANDTGHYFC 524

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L+ +  W
Sbjct: 525 QAAN----DQNNVTIVANLQVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLEHSITW 580

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      +L EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 581 RGDG-----HNLQELGDSDKYIIEDGRLVIHSLDYSDQGNYSCVAGTKLDVVESRAELLV 635

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    +++ + H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 636 VGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 691

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK     T     S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 692 -----LGKVPGNQT-----STTLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 741

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ ++W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 742 EKNPVDVKGEGNETNNMVVTWKPLKWMDWNAPQVQYRVQWRPQGTRGTWQEQI-----VS 796

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE  +
Sbjct: 797 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPPI 829


>gi|403306867|ref|XP_003943941.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Saimiri
           boliviensis boliviensis]
          Length = 1252

 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 206/813 (25%), Positives = 342/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      +D L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQAPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GVYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +      ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEAGNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A  G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 498 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 553

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + V ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 609 VGSPGSVPWLAVSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 715 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQV 802


>gi|403306869|ref|XP_003943942.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Saimiri
           boliviensis boliviensis]
          Length = 1243

 Score =  219 bits (559), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 206/813 (25%), Positives = 342/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      +D L   +        F
Sbjct: 31  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQAPHSGSF 90

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 91  TITGNNSNFAQRFQ----GVYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 146

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 147 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 205

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 206 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 263

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +      ++
Sbjct: 264 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVT 323

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 324 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING-------IPVEELAKDQ 375

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A N+     ++A + V+ L    K    +++TY 
Sbjct: 376 KYRIQRGALILSNVQPS-DTMVTQCEAGNRHGLLLANAYIYVVQLPA--KILTADNQTYM 432

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A  G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 433 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 493 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 548

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 549 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + V ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 604 VGSPGSVPWLAVSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 659

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 660 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 709

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 710 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 764

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 765 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQV 797


>gi|348568095|ref|XP_003469834.1| PREDICTED: neuronal cell adhesion molecule isoform 6 [Cavia
           porcellus]
          Length = 1192

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 226/861 (26%), Positives = 357/861 (41%), Gaps = 99/861 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV   + P S        G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
               G Y C A N+ G+ IS ++ +       +  ++   I  QN    +  C PP   P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLP 174

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPF 383
               +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +    
Sbjct: 175 PAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTR 435
             LKV         K     P TF  PE   +      G+ + LEC+A G P P   W +
Sbjct: 234 ISLKVI------SAKSSKERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPLIYWIK 287

Query: 436 RGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIP 494
               LP N  ++ NF + L I  V   D G Y C A N    +  +++++++A P + + 
Sbjct: 288 EDGTLPANRTFYRNFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKAAPYWIMA 347

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554
             +  +    D T  C A G P    SW  NG  + +E  P +D  R    D   TI + 
Sbjct: 348 PRNLVLSPGEDGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFS 401

Query: 555 N-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
           N  ER  A+YQC A N+     ++A + VL   P     P  +           + C   
Sbjct: 402 NVQERSSAVYQCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFF 460

Query: 614 AAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESK 670
            +P P   W K     GS     I+   ENG L I    +D+SG Y+C A N  G+ +++
Sbjct: 461 GSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNE 518

Query: 671 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 730
             L +   P+   + P    +     +   C    +  L     W  +   + N +    
Sbjct: 519 VHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE---- 573

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGL 780
                 +D   L +T+   +D G Y CV  +T+ ++S    + V  P          P  
Sbjct: 574 ---RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSP 630

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRY 838
           P  +++ +    S  + WT G  N  PIT + I      +    W + +E          
Sbjct: 631 PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE---------- 680

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
               + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G +
Sbjct: 681 VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSE 740

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYY 957
             +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F  
Sbjct: 741 PDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF-- 795

Query: 958 TEYEVKVQAINDVGPGPESEV 978
             Y +KVQA+N +G  PE  V
Sbjct: 796 VPYLIKVQALNVMGFAPEPAV 816


>gi|348568093|ref|XP_003469833.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Cavia
           porcellus]
          Length = 1180

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 226/861 (26%), Positives = 357/861 (41%), Gaps = 99/861 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV   + P S        G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
               G Y C A N+ G+ IS ++ +       +  ++   I  QN    +  C PP   P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLP 174

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPF 383
               +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +    
Sbjct: 175 PAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTR 435
             LKV         K     P TF  PE   +      G+ + LEC+A G P P   W +
Sbjct: 234 ISLKVI------SAKSSKERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPLIYWIK 287

Query: 436 RGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIP 494
               LP N  ++ NF + L I  V   D G Y C A N    +  +++++++A P + + 
Sbjct: 288 EDGTLPANRTFYRNFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKAAPYWIMA 347

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554
             +  +    D T  C A G P    SW  NG  + +E  P +D  R    D   TI + 
Sbjct: 348 PRNLVLSPGEDGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFS 401

Query: 555 N-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
           N  ER  A+YQC A N+     ++A + VL   P     P  +           + C   
Sbjct: 402 NVQERSSAVYQCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFF 460

Query: 614 AAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESK 670
            +P P   W K     GS     I+   ENG L I    +D+SG Y+C A N  G+ +++
Sbjct: 461 GSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNE 518

Query: 671 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 730
             L +   P+   + P    +     +   C    +  L     W  +   + N +    
Sbjct: 519 VHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE---- 573

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGL 780
                 +D   L +T+   +D G Y CV  +T+ ++S    + V  P          P  
Sbjct: 574 ---RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSP 630

Query: 781 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRY 838
           P  +++ +    S  + WT G  N  PIT + I      +    W + +E          
Sbjct: 631 PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE---------- 680

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
               + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G +
Sbjct: 681 VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSE 740

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYY 957
             +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F  
Sbjct: 741 PDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF-- 795

Query: 958 TEYEVKVQAINDVGPGPESEV 978
             Y +KVQA+N +G  PE  V
Sbjct: 796 VPYLIKVQALNVMGFAPEPAV 816


>gi|301786901|ref|XP_002928861.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like [Ailuropoda melanoleuca]
          Length = 1229

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 208/817 (25%), Positives = 350/817 (42%), Gaps = 87/817 (10%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 5   VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPRSGSF 64

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW 311
           T++G N       Q    G Y C ASNK G+ +S  +QL      ++  +    +  +  
Sbjct: 65  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVEEG 120

Query: 312 GKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
              +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 121 ESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 179

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 180 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 237

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +   +  I+
Sbjct: 238 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVMEEDDGEYRCLAENSLGSDRHTYYIT 297

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 298 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 349

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L P+    P ++ETY 
Sbjct: 350 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQL-PAKILTP-DNETYM 406

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A EG    + C    AP P   W  K+G  +    R   + NG L I  +  +D+G Y C
Sbjct: 407 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 466

Query: 659 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
            A N      V    + K    +  GP S  E+   K+T          C A  +  L  
Sbjct: 467 QAANDQNNVTVVANLQVKDATQITQGPQSAIEKKGSKVTFT--------CEASFDPSLQH 518

Query: 712 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           +  W  +G      +L E  ++    I+ G L I +  ++D G Y CV  + +  + ++ 
Sbjct: 519 SITWRGDG-----RNLQEFGDSDKYFIEDGRLVIHSLDYSDQGNYSCVAGTELDVVESRA 573

Query: 771 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 821
            ++V G PG    +++ + H   ++   + W+    +  PI  Y I      +A   W S
Sbjct: 574 ELLVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPQEWYS 633

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
                    +GK     T     S    L P+  Y F+V A N+ G GEPS  S    TP
Sbjct: 634 ---------LGKVPGNQT-----STTLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTP 679

Query: 882 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 941
              P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +   
Sbjct: 680 EAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGTWQEQI--- 736

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             V   ++ + +   +  YE+KVQ++N  G GPE ++
Sbjct: 737 --VSDPLLVVSNTSTFVPYEIKVQSVNSQGKGPEPQI 771


>gi|71998006|ref|NP_001023496.1| Protein LAD-2, isoform a [Caenorhabditis elegans]
 gi|18140037|gb|AAL60232.1|AF456361_1 immunoglobulin domain-containing protein Y54G2A.25 [Caenorhabditis
           elegans]
 gi|148283960|gb|ABQ57413.1| LAD-2 long isoform [Caenorhabditis elegans]
 gi|351051345|emb|CCD83513.1| Protein LAD-2, isoform a [Caenorhabditis elegans]
          Length = 1187

 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 208/808 (25%), Positives = 349/808 (43%), Gaps = 69/808 (8%)

Query: 198 DVVFDLSKRSIL-NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGG 256
           +V + L    +L N +TL C A    +  Y W K+    +  V +  D L +K      G
Sbjct: 34  EVWYHLDDEDLLKNRLTLRCEADENTD-RYSWLKDG---EPFVIDSEDVLWEKES--QSG 87

Query: 257 NLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF 316
           +++   P     +G Y C ASN FG+ +S  + L  G +  F  KR  ++     G+++ 
Sbjct: 88  SIVFTKP-HASHQGYYQCFASNIFGTALSNKMHLRLGSLEHFP-KRDVKLLRVKEGESLT 145

Query: 317 --CDPPTNYPGVNYYWA-RDYFPNFVEEDKR---VFVSYDGALYFSALEQIDAGN---YS 367
             C PP   P     W  R    + V E  R   + V  +G L+FS++E  D      Y 
Sbjct: 146 LNCTPPRGTPDPKIVWLYRSLDDSSVIETIRSRHITVDNEGHLHFSSVELSDGKATLVYE 205

Query: 368 CNVQSKV-SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE--APKAGDKVRLECVAF 424
           C   S V     R+G    L + P    Q    P       P     +AG +++L+C+  
Sbjct: 206 CAATSPVLRGEYRSGDRIQLDIEPS---QDKSHPVKKMSVSPSEVTVRAGGQLKLQCIFG 262

Query: 425 GYPVPSYNWTRRGSPLPRN------AYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           G P+P+  W++    LP++      ++  +F R L + NV  +D G Y CR  +    L 
Sbjct: 263 GRPLPTIFWSKIDGELPKSRIKDLTSHESDFGRSLIVENVHPDDAGAYECRGRH----LV 318

Query: 479 SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
            +V + + A P +   P  D  +  ++     C A G P    +W  NG+ L+     L 
Sbjct: 319 HTVNVRVMAAPFWEFDPPRDISLPEESTGELECLAGGQPTPIITWSMNGKFLHE----LA 374

Query: 538 DQDRYFIQDN--VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           +  R  + D+  +L +R LN + D  +YQC A N L   +++A + V    P F+  P  
Sbjct: 375 EDSRRVLLDHGRILRVRNLNHDLDTGVYQCNASNPLGYVFANAFVHVRAHAPFFRM-PAA 433

Query: 596 SETYAGEGGNVTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDS 653
                     V + C+ +AAP+    W    D  +    G+ K+F N   ++  V+  D 
Sbjct: 434 RHWKVVLHSTVVLDCDVDAAPEAMVRWVDADDRPLQVVEGKNKLFPNHTFMVYDVNSADE 493

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP--PKITIAAHRNLQLRCSAHTEELLDV 711
           G+Y C  +N +G++ +  RL V   P+Y+ ++P   ++ + A    ++ C A  +  L +
Sbjct: 494 GLYYCNVSNKYGINRATNRLQVFK-PTYFVRIPTPKRLILEAGETAEVFCEAVADPRLPI 552

Query: 712 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            Y WT NG  +        E+    I    L   +     +G  +C   + V        
Sbjct: 553 RYQWTINGKVL-------TESQYYEILPDRLRFRSVRGRHSGIIDCAAITDVDVKLASMQ 605

Query: 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 831
           +IV+  P  P  V+     +  AT++W   + +G  I  Y +   T++    + V    I
Sbjct: 606 LIVKDVPAHPV-VETAHCSERKATVKWVAASDHGDSIKKYIVEMFTDFKKNEWEV----I 660

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY------GEPSSPSPQYNTPADKP 885
            +EV+    ++   ++  L PW  Y F+V+A N  G       G+P        T    P
Sbjct: 661 NEEVN--VNKETFEVDITLTPWVNYTFRVVAVNSHGRSDMKIDGQPKEDWLTCQTRPSFP 718

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
           Y  P+ + G G +  +L ISW+PL R   NAPN+ Y + ++        +E L E     
Sbjct: 719 YTNPTGVKGEGTEPDNLVISWKPLDRYYWNAPNMQYLVRYKLDEPIHGWTEFLVEDSLAN 778

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPG 973
             ++R    F   +Y ++VQ++N VGP 
Sbjct: 779 FTIIRDQPTF--RKYLIQVQSVNSVGPS 804


>gi|167045807|gb|ABZ10475.1| L1 cell adhesion molecule isoform 1 precursor (predicted)
           [Callithrix jacchus]
          Length = 1252

 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 205/813 (25%), Positives = 342/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      +D L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +      ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEAGNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A  G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 498 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 553

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDMVESRAQLLV 608

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 609 VGSPGSVPRLALSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 715 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQV 802


>gi|283464051|gb|ADB22609.1| neurofascin [Saccoglossus kowalevskii]
          Length = 577

 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 163/551 (29%), Positives = 249/551 (45%), Gaps = 29/551 (5%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYH 273
           L C A G P P+Y W K          N  D     R T++ G L+I +P +  D G+Y 
Sbjct: 51  LKCVARGNPTPTYVWKK----------NGRDVELTDRVTMTDGTLVIEEPHERLDDGTYQ 100

Query: 274 CKASNKFGSIISESVQLAFGFIGEFNLKRAPEIG-NQNWGKAMFCDPPTNYPGVNYYWAR 332
           C A+N +G+ +S  + L  G +G F  K   +   N N G  + C+ P+  P    +W+ 
Sbjct: 101 CYANNNYGTALSNKITLRVGNMGRFTPKEVEQNNININSGAKLECNAPSGIPDPKIFWSL 160

Query: 333 DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392
              P  +    RV    +G L FS + + D   Y CN  +++    R  P F + V   S
Sbjct: 161 K-LPKVLTYTNRVNQDPEGNLIFSNVVESDTDTYFCNALAEMLGEMRVSPAFNVSVLTLS 219

Query: 393 NFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNR 451
             QQ      +          G+ + ++C+A  +P P+ +W     PLP     + +F +
Sbjct: 220 PAQQRAPVLLYHPELDVVALRGETLSMKCLADAFPTPTVSWEGLTKPLPEERTTYPSFGQ 279

Query: 452 ILTIPNVKVEDQGEYICRASND-RSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTC 510
            + I +VK ED+GEY C ASN   S    SV + ++A P + I   D+ +   +D T  C
Sbjct: 280 EVLIADVKFEDEGEYRCTASNAIGSPARWSVKVRVEAAPYWAIDHQDETIPPYSDFTMEC 339

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNPERDPA-MYQCRAK 568
            A G+P    SW     L+N +T+P  D + R  +  N   I + N + D + +YQC A 
Sbjct: 340 LAEGIPPPAISW-----LVNGQTIPNPDTNRRRRVSGN--KIHFTNAKADDSDVYQCMAS 392

Query: 569 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
           N      +S  L VL + P+  ++P    T A E G V I C    +PKP+  W  +G  
Sbjct: 393 NTHGKIMTSMYLNVLAV-PARIEQPPPELTLATESGEVAIHCGVFGSPKPRVTWSFNGQE 451

Query: 629 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
           + SGGR +  ENG L+I  V  +D G+Y C A N  G     G L+ +   +  +Q P  
Sbjct: 452 V-SGGRYETLENGTLIIQDVGFNDRGLYKCYARNEFGQQTEFG-LLYVKKKTEIQQKPSD 509

Query: 689 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 748
             +    N Q  CSA  +  +++   W  +G R+   DL        + D   L I    
Sbjct: 510 EYVKEDENAQFDCSATYDSSMELTIFWERDGERL-QTDLPTSRYSTNSEDS--LVIRRTQ 566

Query: 749 FADAGEYECVV 759
            +D  +Y CV 
Sbjct: 567 MSDTNDYTCVA 577



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 158/377 (41%), Gaps = 28/377 (7%)

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTI--PNVKVEDQGEYICRASNDR 474
            +L+CVA G P P+Y W + G  +         +  L I  P+ +++D G Y C A+N+ 
Sbjct: 49  AQLKCVARGNPTPTYVWKKNGRDVELTDRVTMTDGTLVIEEPHERLDD-GTYQCYANNNY 107

Query: 475 -SALESSVTISIQAEPNFTIPLTDKHMDN-QADLTWTCEA-FGVPDVTYSW-FRNGELLN 530
            +AL + +T+ +     FT    +++  N  +     C A  G+PD    W  +  ++L 
Sbjct: 108 GTALSNKITLRVGNMGRFTPKEVEQNNININSGAKLECNAPSGIPDPKIFWSLKLPKVLT 167

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQL--KTRYSSA-QLRVLTLKP 587
                 +D +   I  NV+       E D   Y C A  ++  + R S A  + VLTL P
Sbjct: 168 YTNRVNQDPEGNLIFSNVV-------ESDTDTYFCNALAEMLGEMRVSPAFNVSVLTLSP 220

Query: 588 SFKKRPL-----ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN 642
           + ++ P+     E +  A  G  +++ C  +A P P   W+     +             
Sbjct: 221 AQQRAPVLLYHPELDVVALRGETLSMKCLADAFPTPTVSWEGLTKPLPEERTTYPSFGQE 280

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           +LI+ V  +D G Y CTA+N  G        + +    Y+       TI  + +  + C 
Sbjct: 281 VLIADVKFEDEGEYRCTASNAIGSPARWSVKVRVEAAPYWAIDHQDETIPPYSDFTMECL 340

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
           A  E +   A  W  NG  I N D N        + G  +  TNA   D+  Y+C+  +T
Sbjct: 341 A--EGIPPPAISWLVNGQTIPNPDTNRRR----RVSGNKIHFTNAKADDSDVYQCMASNT 394

Query: 763 VGKISTKTTVIVEGPPG 779
            GKI T   + V   P 
Sbjct: 395 HGKIMTSMYLNVLAVPA 411



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 181/484 (37%), Gaps = 96/484 (19%)

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSA-LEQIDAGNYSC----NVQSKVSD-- 376
           P   Y W ++     VE   RV ++ DG L      E++D G Y C    N  + +S+  
Sbjct: 59  PTPTYVWKKN--GRDVELTDRVTMT-DGTLVIEEPHERLDDGTYQCYANNNYGTALSNKI 115

Query: 377 ---TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYN 432
               G  G F P +V      +Q    NN               +LEC A  G P P   
Sbjct: 116 TLRVGNMGRFTPKEV------EQ----NNI--------NINSGAKLECNAPSGIPDPKIF 157

Query: 433 WTRRGSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASND-------RSALE 478
           W+ +   LP+   + N  R+       L   NV   D   Y C A  +         A  
Sbjct: 158 WSLK---LPKVLTYTN--RVNQDPEGNLIFSNVVESDTDTYFCNALAEMLGEMRVSPAFN 212

Query: 479 SSVTISIQAEPNFTIPLTDKHMDNQA----DLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
            SV     A+    + L    +D  A     L+  C A   P  T SW          T 
Sbjct: 213 VSVLTLSPAQQRAPVLLYHPELDVVALRGETLSMKCLADAFPTPTVSW-------EGLTK 265

Query: 535 PL-EDQDRY--FIQDNVLT-IRYLNPERDPAMYQCRAKNQLKT--RYSSAQLRVLTLKPS 588
           PL E++  Y  F Q+ ++  +++     D   Y+C A N + +  R+S        +K  
Sbjct: 266 PLPEERTTYPSFGQEVLIADVKF----EDEGEYRCTASNAIGSPARWS--------VKVR 313

Query: 589 FKKRPLESETYAGEG----GNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGN 642
            +  P  +  +  E      + T+ C  E  P P   W  +G  I +    RR+      
Sbjct: 314 VEAAPYWAIDHQDETIPPYSDFTMECLAEGIPPPAISWLVNGQTIPNPDTNRRRRVSGNK 373

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR-NLQLRC 701
           +  +    DDS +Y C A+N HG   +   L VL  P+  EQ PP++T+A     + + C
Sbjct: 374 IHFTNAKADDSDVYQCMASNTHGKIMTSMYLNVLAVPARIEQPPPELTLATESGEVAIHC 433

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 761
                    V   W+ NG  +       LE        G L I +  F D G Y+C  ++
Sbjct: 434 GVFGSPKPRVT--WSFNGQEVSGGRYETLE-------NGTLIIQDVGFNDRGLYKCYARN 484

Query: 762 TVGK 765
             G+
Sbjct: 485 EFGQ 488



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 132/355 (37%), Gaps = 42/355 (11%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           R P  +  P   V  L   ++    ++ C A  +P P+  W             L  PL 
Sbjct: 224 RAPVLLYHPELDVVALRGETL----SMKCLADAFPTPTVSW-----------EGLTKPLP 268

Query: 248 DKRFTLS--GGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE 305
           ++R T    G  ++I D +  ED G Y C ASN  GS    SV++       + +    E
Sbjct: 269 EERTTYPSFGQEVLIADVK-FEDEGEYRCTASNAIGSPARWSVKVRVEAAPYWAIDHQDE 327

Query: 306 IGNQNWGKAMFC----DPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI 361
                    M C     PP   P +++       PN  + ++R  VS    ++F+  +  
Sbjct: 328 TIPPYSDFTMECLAEGIPP---PAISWLVNGQTIPN-PDTNRRRRVS-GNKIHFTNAKAD 382

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD--KVRL 419
           D+  Y C   +              K+        L  P    +  PE   A +  +V +
Sbjct: 383 DSDVYQCMASNTHG-----------KIMTSMYLNVLAVPARIEQPPPELTLATESGEVAI 431

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
            C  FG P P   W+  G  +    Y    N  L I +V   D+G Y C A N+      
Sbjct: 432 HCGVFGSPKPRVTWSFNGQEVSGGRYETLENGTLIIQDVGFNDRGLYKCYARNEFGQQTE 491

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF--GVPDVTYSWFRNGELLNSE 532
              + ++ +       +D+++    +  + C A      ++T  W R+GE L ++
Sbjct: 492 FGLLYVKKKTEIQQKPSDEYVKEDENAQFDCSATYDSSMELTIFWERDGERLQTD 546



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 106/283 (37%), Gaps = 40/283 (14%)

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
           +D + +    C A G P  TY W +NG         +E  DR  + D  L I   +   D
Sbjct: 43  VDPRVNAQLKCVARGNPTPTYVWKKNGR-------DVELTDRVTMTDGTLVIEEPHERLD 95

Query: 560 PAMYQCRAKNQLKTRYSSA-QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 617
              YQC A N   T  S+   LRV  +   F  + +E        G   + CN P   P 
Sbjct: 96  DGTYQCYANNNYGTALSNKITLRVGNMG-RFTPKEVEQNNININSG-AKLECNAPSGIPD 153

Query: 618 PKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL--- 673
           PK  W  K   ++    R      GNL+ S V   D+  Y C A     + E  G +   
Sbjct: 154 PKIFWSLKLPKVLTYTNRVNQDPEGNLIFSNVVESDTDTYFCNA-----LAEMLGEMRVS 208

Query: 674 -----IVLHGPSYYEQLP-----PKITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVR 721
                 VL      ++ P     P++ + A R   L ++C A       V++     G+ 
Sbjct: 209 PAFNVSVLTLSPAQQRAPVLLYHPELDVVALRGETLSMKCLADAFPTPTVSW----EGL- 263

Query: 722 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 764
                L E  T   +    +L I +  F D GEY C   + +G
Sbjct: 264 --TKPLPEERTTYPSFGQEVL-IADVKFEDEGEYRCTASNAIG 303



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636
           S Q+   T  PS  + P E+        N  + C     P P +VWKK+G  +    R  
Sbjct: 21  STQVIDYTSPPSITEEP-EAYYIVDPRVNAQLKCVARGNPTPTYVWKKNGRDVELTDRVT 79

Query: 637 IFENGNLLISPVSRDDSGIYSCTATNVHG 665
           + +   ++  P  R D G Y C A N +G
Sbjct: 80  MTDGTLVIEEPHERLDDGTYQCYANNNYG 108


>gi|190336629|gb|AAI62464.1| Neural adhesion molecule L1.2 [Danio rerio]
          Length = 1271

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 196/782 (25%), Positives = 346/782 (44%), Gaps = 54/782 (6%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGN----LIINDPRQ 265
           +DITL+C A G P P++ W K D V+        DP  D   ++S  +    L   D   
Sbjct: 67  DDITLTCDATGNPPPTFRWVK-DGVE-------FDPSKDPDLSVSRDSGTFSLTAKDGPI 118

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPT 321
            + +G Y+C ASN+ G+ +S   ++          E  + +  E G       + C+PP 
Sbjct: 119 HQYQGRYNCYASNELGTAVSNEARIVTENTPTLQKEKIITKKVEEGE---SVVLPCNPPN 175

Query: 322 NYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRN 380
                  +W  D     +++++RV    DG LYFS     D+  +Y+CN+Q   +   + 
Sbjct: 176 GTVAPVIHWM-DKKLRHIQQNERVIQGRDGNLYFSHATVADSRDDYTCNIQFPSARVIKL 234

Query: 381 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP---KAGDKVRLECVAFGYPVPSYNWTRRG 437
                L V   ++  + + P     T   +     +G  + LEC+  G P PS  W R+ 
Sbjct: 235 KEPIKLTVSSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSPSIQWIRKD 294

Query: 438 SPLPRNAYFENFN-RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             L  +   ++ N R+L   N+   D GEY C A+N +     +  ++++A P +     
Sbjct: 295 GVLSESRTTKDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAPYWIKEPK 354

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
            +       +   C+A G+P    +W  NG LL+     ++   R  ++  VLT++ +  
Sbjct: 355 SQLYAPGETVKLECKADGIPKPEVTWSINGILLSD----IDPDPRRSVKHGVLTLKNVE- 409

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNVTIFCNPEAA 615
             D A++QC+A ++  +   +A + V+ L P       +   Y+  EG    + C    +
Sbjct: 410 LSDTAVFQCKAASKHGSVLINAYVYVIELPPQILTE--DGLMYSVAEGQTTELACETFGS 467

Query: 616 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+P   W+ +    + +  R     +G+L IS  S +DSG Y+CT  N      ++  L 
Sbjct: 468 PRPNVTWEGESWGALVANQRMIQLSDGSLQISNASLNDSGQYTCTVNNSKITITAE--LD 525

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETP 733
           VL+  +   + P  + I   +   L C    +   D+  + W  N  ++        ++ 
Sbjct: 526 VLNK-TVIVKPPLALRIQRGKPATLTCEYQVDSRQDLPQVQWRKNMQKLTESS----DSD 580

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 793
              ID   L I      D G Y C V +T+       ++ +   P  P  +Q+ E  +  
Sbjct: 581 KYMIDESTLIIPEVEEEDEGIYTCEVITTLDMAKASGSITIVDRPDPPSLIQMTEPKERR 640

Query: 794 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853
            T+ WT GA +  P+  Y I     +  T  +  E    +E+ R +G  + +    L P+
Sbjct: 641 VTLSWTPGADHNSPVLEYLI----EFEETGSDRKEW---EELSRVSGSSQRATLP-LKPF 692

Query: 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
            +Y F+VI+ NE+G  +PS  +  Y+TPA  P   P  +     + G L I+W+ + R  
Sbjct: 693 ISYRFRVISINEIGKSDPSMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRRS 752

Query: 914 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            N P+ +YK+ WRK   +     T K+  +    V  + +   ++ +++KVQA+N++G G
Sbjct: 753 FNGPDFHYKVMWRKVLGSGPSWHT-KDITSPPFVVTDVGN---FSAFDIKVQAVNEMGEG 808

Query: 974 PE 975
           PE
Sbjct: 809 PE 810



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 150/386 (38%), Gaps = 26/386 (6%)

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFENFNRILTIPNVKVED------QGE 465
           + D + L C A G P P++ W + G    P      + +R     ++  +D      QG 
Sbjct: 65  SADDITLTCDATGNPPPTFRWVKDGVEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQGR 124

Query: 466 YICRASNDR-SALESSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCE-AFGVPDVTYSW 522
           Y C ASN+  +A+ +   I  +  P      +  K ++    +   C    G       W
Sbjct: 125 YNCYASNELGTAVSNEARIVTENTPTLQKEKIITKKVEEGESVVLPCNPPNGTVAPVIHW 184

Query: 523 FRNGELL----NSETLPLEDQDRYFIQDNVLTIR--YLNPERDPAMYQCRAKNQLKTRYS 576
             + +L     N   +   D + YF    V   R  Y    + P+    + K  +K   S
Sbjct: 185 M-DKKLRHIQQNERVIQGRDGNLYFSHATVADSRDDYTCNIQFPSARVIKLKEPIKLTVS 243

Query: 577 SAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR 635
           S+   V   +P   +    S +Y    G N+ + C  +  P P   W +   ++      
Sbjct: 244 SSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSPSIQWIRKDGVLSESRTT 303

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           K   +  L    +S  D G Y CTATN  GM     R+ V   P Y+ + P     A   
Sbjct: 304 KDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAP-YWIKEPKSQLYAPGE 362

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
            ++L C A  + +      W+ NG+ + ++D +    P  ++  G+L + N   +D   +
Sbjct: 363 TVKLECKA--DGIPKPEVTWSINGILLSDIDPD----PRRSVKHGVLTLKNVELSDTAVF 416

Query: 756 ECVVKSTVGKISTKTTV-IVEGPPGL 780
           +C   S  G +     V ++E PP +
Sbjct: 417 QCKAASKHGSVLINAYVYVIELPPQI 442


>gi|170649623|gb|ACB21210.1| L1 cell adhesion molecule isoform 1 precursor (predicted)
           [Callicebus moloch]
          Length = 1252

 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 208/817 (25%), Positives = 345/817 (42%), Gaps = 87/817 (10%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      +D L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  +QL A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + +V  ED GEY C A N   +      ++
Sbjct: 269 FPTPTIKWLRPSGPMPADHVTYQNHNKTLQLLSVGEEDDGEYRCVAENSLGSARHDYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLQKPQNHLYGPGETARLDCQVQGRPQPEITWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +    P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNAQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
            A N      +    + K    ++ GP S  E+   ++T          C A  +  L  
Sbjct: 498 QAANDQNNVTIVANLQIKDATQIVQGPRSTIEKKGSRVTFT--------CQASFDPSLQP 549

Query: 712 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           +  W  +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++ 
Sbjct: 550 SITWRGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRA 604

Query: 771 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 821
            ++V G PG    + + ++H   +    + W+    +  PI  Y I      +A   W S
Sbjct: 605 QLLVVGSPGSVPRLALSDLHLLKQNQVHLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS 664

Query: 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
                    +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP
Sbjct: 665 ---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTP 710

Query: 882 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 941
              P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +   
Sbjct: 711 EAAPEKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI--- 767

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             V    + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 768 --VSDPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQV 802


>gi|345307999|ref|XP_001505279.2| PREDICTED: contactin-3-like [Ornithorhynchus anatinus]
          Length = 475

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/400 (33%), Positives = 202/400 (50%), Gaps = 17/400 (4%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           ++Y W  + +P FV+E +R+FVS + G LY + +E  D GNY+C V S V+++   G   
Sbjct: 11  LSYAWIFNEYPTFVQEGRRLFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNSQVFGSPT 70

Query: 385 PLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR 442
           PL +       +   K    FP+T P A  +   V+LEC A G PVP  +W RR   LP 
Sbjct: 71  PLVLRTDGVMGEYEPKIEVQFPETLPVAKDS--TVQLECFALGNPVPQISW-RRSDGLPF 127

Query: 443 NAYFENF--NRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHM 500
           ++  +    N IL IPN + ED G Y C   N R    +   ++  A+P++   + +   
Sbjct: 128 SSKIKTMKANGILEIPNFQQEDSGSYECITENSRGKNIAKGRLTYYAKPHWLQIIQNVEA 187

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
             + +L W C+A G P  +Y W +NGE L  E        R  I++  LTI  LN   D 
Sbjct: 188 TMEENLYWECKASGKPKPSYRWLKNGETLVVE-------GRIQIENGALTITSLNL-TDS 239

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 620
            MYQC A+N+    YSSA+L+VL   P F K P++       G  V   C P+A+PK  +
Sbjct: 240 GMYQCIAENKHGLMYSSAELKVLAFAPDFSKNPMKKLIQVQVGSLVNFECKPKASPKAVY 299

Query: 621 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
            WK+   ++    R  I + G L I+ V++ D G Y+C A N  G+  S  +LIV   P+
Sbjct: 300 SWKRGDELLHENARITILKEGELRIANVTKLDIGTYTCVAENQFGVASSTTKLIVAE-PT 358

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
                P  + ++   ++ L C    + LLD+ + W  NGV
Sbjct: 359 RIILGPSNMDVSVGESVILPCQVQYDPLLDIMFTWYLNGV 398



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 108/268 (40%), Gaps = 17/268 (6%)

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
           C A G P    SW R      S+ LP   + +    + +L I     E D   Y+C  +N
Sbjct: 107 CFALGNPVPQISWRR------SDGLPFSSKIKTMKANGILEIPNFQQE-DSGSYECITEN 159

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 629
                 +  +L     KP + +     E    E  N+   C     PKP + W K+G  +
Sbjct: 160 SRGKNIAKGRLTYYA-KPHWLQIIQNVEATMEE--NLYWECKASGKPKPSYRWLKNGETL 216

Query: 630 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
              GR +I ENG L I+ ++  DSG+Y C A N HG+  S   L VL     + + P K 
Sbjct: 217 VVEGRIQI-ENGALTITSLNLTDSGMYQCIAENKHGLMYSSAELKVLAFAPDFSKNPMKK 275

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749
            I       +      +      Y W       G+  L+E     I +  G L I N + 
Sbjct: 276 LIQVQVGSLVNFECKPKASPKAVYSWKR-----GDELLHENARITI-LKEGELRIANVTK 329

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGP 777
            D G Y CV ++  G  S+ T +IV  P
Sbjct: 330 LDIGTYTCVAENQFGVASSTTKLIVAEP 357



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 14/159 (8%)

Query: 216 CYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCK 275
           C A G P PSY W K     + LV        + R  +  G L I     + D G Y C 
Sbjct: 197 CKASGKPKPSYRWLKNG---ETLVV-------EGRIQIENGALTITS-LNLTDSGMYQCI 245

Query: 276 ASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAM-FCDPPTNYPGVNYYWARDY 334
           A NK G + S +      F  +F+     ++     G  + F   P   P   Y W R  
Sbjct: 246 AENKHGLMYSSAELKVLAFAPDFSKNPMKKLIQVQVGSLVNFECKPKASPKAVYSWKRG- 304

Query: 335 FPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSK 373
               + E+ R+ +  +G L  + + ++D G Y+C  +++
Sbjct: 305 -DELLHENARITILKEGELRIANVTKLDIGTYTCVAENQ 342



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 29/194 (14%)

Query: 635 RKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSY 681
           R++F   E G+L I+ V   D G Y+C  T+     +  G    L          + P  
Sbjct: 28  RRLFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNSQVFGSPTPLVLRTDGVMGEYEPKI 87

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN---GVRIGNMDLNELETPNINID 738
             Q P  + +A    +QL C A    +  +++  +       +I  M  N          
Sbjct: 88  EVQFPETLPVAKDSTVQLECFALGNPVPQISWRRSDGLPFSSKIKTMKAN---------- 137

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
            G+LEI N    D+G YEC+ +++ GK   K  +     P     +Q VE       + W
Sbjct: 138 -GILEIPNFQQEDSGSYECITENSRGKNIAKGRLTYYAKPHWLQIIQNVEA-TMEENLYW 195

Query: 799 TDGATNGRPITHYK 812
              A+ G+P   Y+
Sbjct: 196 ECKAS-GKPKPSYR 208


>gi|41281630|ref|NP_571458.1| neural cell adhesion molecule L1.1 precursor [Danio rerio]
 gi|36142988|gb|AAQ85079.1| neural adhesion molecule L1.1 [Danio rerio]
          Length = 1269

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 209/824 (25%), Positives = 348/824 (42%), Gaps = 97/824 (11%)

Query: 184 DKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANL 242
           +K+ + P F  QP     F L      +D+ L+C A G P+PS+ W K+           
Sbjct: 44  NKLKQAPEFTTQPVPHTAFSL------DDVNLACEASGDPSPSFRWVKDG---------- 87

Query: 243 IDPLSDKRF--TLSGGNLIINDPRQVED--RGSYHCKASNKFGSIISESVQLAFGFIGEF 298
                 K+F   LS    +   P       +G+Y C A+N+ G+ +S  V L    +   
Sbjct: 88  ------KQFGEVLSESGTLTPHPTMDLHFYQGTYRCYAANELGTAVSNLVHLTTEPVPSL 141

Query: 299 -----NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
                  +RA E+G       + C+PP +      +W    F + +  ++RV +S DG L
Sbjct: 142 AKVKKQKRRAYEVGE---SAVLRCNPPKSSVTPKIHWMDMQF-HHIPLNERVTISRDGNL 197

Query: 354 YFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF-----QQLKFPNNFPKTF 407
           YF+ L   D+  +Y+CN     +          + V P ++       +L  P     ++
Sbjct: 198 YFANLIANDSRDDYTCNAHYINASIILPKEPMSIYVTPSNSVVKNRRAKLHHPAGARSSY 257

Query: 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFN-RILTIPNVKVEDQGEY 466
                 G  + LEC+  G P P  +W R  S L  N   + +N R L I NV   D GEY
Sbjct: 258 --LVLRGQTLTLECIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWLQIDNVLESDDGEY 315

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           +C A N  ++++   T++++A P +T    +        +   C+A G+P    +W  NG
Sbjct: 316 VCTARNSENSVKHHYTVTVEAAPYWTRRPEEHLYAPGETVRLDCQADGIPAPNITWSING 375

Query: 527 ELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
                  +P+   D   R  +    L +  +    D A+YQC A N+  +   +  + V+
Sbjct: 376 -------VPVSGTDVDPRRRVSSGKLILSNVE-FSDTAVYQCEAVNKHGSILINTHVHVV 427

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGN 642
            L P+    P E    A  G  V + C    +P PK  W+   +I   S  +     NG+
Sbjct: 428 EL-PAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQMTNGS 486

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQL 699
           L IS VS +DS  Y+C+ +  +    ++  ++    + GP      P  + +    +  L
Sbjct: 487 LKISNVSEEDSNRYTCSVSETNKSISAELEVLNRTKIVGP------PQNLHVIRGSDAIL 540

Query: 700 RCSAHTEELLDVAYI-WTHNGVRI----GNMDLNELETPNINIDGGLLEITNASFADAGE 754
            C    +  L    + W  +G +I     N   +E+E        G L++ +    D G 
Sbjct: 541 HCKYTVDHNLKSPTVQWKKDGHKITASTSNDKYHEIE--------GSLKVLDVQMEDMGI 592

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y C V +T+   +    + V+  P  P  +++ E  + S TI W     N  P+T Y I 
Sbjct: 593 YSCGVSTTLDSDTASGYITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNSPVTEYVI- 651

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKE--ASIENVLVPWSTYEFKVIAGNELGYGEPS 872
                     N  E     +  +Y    +    +E  L P+S Y F++ A N +G   PS
Sbjct: 652 --------EMNEGETPDEGQWQKYRSVSQDIRQLEIHLQPYSKYHFQIRAVNSIGTSAPS 703

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
             S  Y+TPA KP + P  +         + ISW+ + R + N P   YK+FWR+  D+ 
Sbjct: 704 ESSLSYSTPAAKPDRNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAADSG 763

Query: 933 FQ-SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
              +E+     +V    + + +   +  +E+KVQA+ND+G  PE
Sbjct: 764 AHWTES-----SVSNPPLLVNNTGTFVSFEIKVQAVNDLGAAPE 802



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 142/612 (23%), Positives = 236/612 (38%), Gaps = 96/612 (15%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI----LTIPNVKVEDQGEYICR 469
           G+ VRL+C A G P P+  W+  G P+      +   R+    L + NV+  D   Y C 
Sbjct: 352 GETVRLDCQADGIPAPNITWSINGVPV-SGTDVDPRRRVSSGKLILSNVEFSDTAVYQCE 410

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT--WTCEAFGVPDVTYSWFRNGE 527
           A N   ++  +  + +   P   +   ++     A  T    C  FG P     W    E
Sbjct: 411 AVNKHGSILINTHVHVVELPAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHW----E 466

Query: 528 LLNSETLP-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           +L+S  +P L +     + +  L I  ++ E D   Y C      K+   SA+L VL  +
Sbjct: 467 ILDS--IPALSNAKISQMTNGSLKISNVS-EEDSNRYTCSVSETNKS--ISAELEVLN-R 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCN---PEAAPKPKFVWKKDGN-IIGSGGRRKIFE-NG 641
                 P     +   G +  + C          P   WKKDG+ I  S    K  E  G
Sbjct: 521 TKIVGPP--QNLHVIRGSDAILHCKYTVDHNLKSPTVQWKKDGHKITASTSNDKYHEIEG 578

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L +  V  +D GIYSC  +     D + G + V   P      PP+          L+ 
Sbjct: 579 SLKVLDVQMEDMGIYSCGVSTTLDSDTASGYITVQDKPD-----PPQ---------SLKL 624

Query: 702 SAHTEELLDVAY---IWTHNGVRIGNMDLNELETPN---------INIDGGLLEITNASF 749
           S   E  + +++   +  ++ V    +++NE ETP+         ++ D   LEI    +
Sbjct: 625 SEKMERSVTISWMPSVENNSPVTEYVIEMNEGETPDEGQWQKYRSVSQDIRQLEIHLQPY 684

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGPPGL-----PGGVQVVEVHKTSATIQW--TDGA 802
           +    ++    +++G  +   + +    P       P  V  +     S  I W   D  
Sbjct: 685 SKY-HFQIRAVNSIGTSAPSESSLSYSTPAAKPDRNPENVMTLSTDPKSMIISWQEMDRR 743

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN--VLV----PWSTY 856
               P   YK+  R                +  D      E+S+ N  +LV     + ++
Sbjct: 744 QFNGPGFQYKVFWR----------------RAADSGAHWTESSVSNPPLLVNNTGTFVSF 787

Query: 857 EFKVIAGNELGYGEPSSPSPQY---NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
           E KV A N+LG    ++P P      +  D P +APS +     +   + + W P+  E 
Sbjct: 788 EIKVQAVNDLG----AAPEPLTVIGYSGEDFPLEAPSALSVTELQKTSVMVRWSPVRPES 843

Query: 914 QNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGI------AVVRIPSEF-YYTEYEVKVQ 965
                + YKI+ R K  +   ++      GN  +      A  +I S+  YY++Y + + 
Sbjct: 844 VRGHLLGYKIYLRMKGPSGRLRAGRSPAVGNPTVIEVPADAAEKIVSDLQYYSDYTLTIT 903

Query: 966 AINDVGPGPESE 977
           A N  G GP SE
Sbjct: 904 AFNSKGEGPHSE 915


>gi|33354079|dbj|BAC81123.1| L1 cell adhesion molecule [Pan troglodytes]
          Length = 1255

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 203/813 (24%), Positives = 345/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 34  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 93

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 94  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 149

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 150 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 208

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 209 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 266

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 267 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 326

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 327 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 378

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 379 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 435

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 436 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 495

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 496 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 551

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 552 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 606

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 607 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 662

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 663 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 712

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 713 EKNPMDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 767

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 768 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 800


>gi|33354077|dbj|BAC81122.1| L1 cell adhesion molecule [Homo sapiens]
          Length = 1255

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 204/810 (25%), Positives = 341/810 (42%), Gaps = 73/810 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 34  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 93

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 94  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 149

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 150 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 208

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 209 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 266

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 267 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 326

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 327 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 378

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 379 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 435

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 436 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 495

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N          L V    +   Q P          +   C A  +  L  +  W  +
Sbjct: 496 LAANDQNNVTIMANLKVKDA-TQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGD 554

Query: 719 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V G 
Sbjct: 555 G-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGS 609

Query: 778 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSE 828
           PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S       
Sbjct: 610 PGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------- 662

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P + 
Sbjct: 663 --LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKN 715

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V    
Sbjct: 716 PVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPF 770

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 771 LVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 800


>gi|350588946|ref|XP_003482750.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Sus scrofa]
          Length = 1192

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 225/838 (26%), Positives = 346/838 (41%), Gaps = 96/838 (11%)

Query: 185 KIPRGPYFIK---QPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYV 234
           ++P  P  ++   QP  +     K  I++   +I + C A G P PS+ W +     D  
Sbjct: 31  EVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDID 90

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G L IN   D +     G Y C A N+ G+ IS ++ + 
Sbjct: 91  KDPLVT----------MKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIR 140

Query: 292 FGFIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 +  ++  P          + C PP   P    +W  + F   + + +RV    +
Sbjct: 141 SSRSPLWTKEKLEPMTLRSGQSLVLPCRPPMGLPPPIIFWMDNSF-QRLPQSERVSQGLN 199

Query: 351 GALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-- 407
           G LYFS +   DA  +Y C  +   + T +      +KV         K     P TF  
Sbjct: 200 GDLYFSNVLPEDAREDYICYARFNHTQTIQQKQPISVKV------TSAKPHRERPPTFLT 253

Query: 408 PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKV 460
           PE   +      G+ + LEC+A G P P   W +    LP N  ++ NF + L I  V  
Sbjct: 254 PEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKTLQIIQVTE 313

Query: 461 EDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTY 520
            D G Y C A N   A+  +++++++A P + I   +  +    D T  C A G P    
Sbjct: 314 ADSGNYQCIAKNTLGAIHHTISVTVKAAPYWIIAPQNLVLSPGEDGTLICRANGNPKPRI 373

Query: 521 SWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQ 579
           SW  NG  +  E  P +D  R    D   TI + N  ER  ++YQC A N+     ++A 
Sbjct: 374 SWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVYQCNASNEYGYLLANAF 427

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
           + VL   P        + T      +   F  C    +P P   W K     GS  R  I
Sbjct: 428 VNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAK--GSALREDI 482

Query: 638 F---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
           +   ENG L I    +D +G Y+C A N  GM +++  L +   P+   + P    +   
Sbjct: 483 YILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQPEYAVVQRG 541

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDGGLLEITNASFADAG 753
             +   C    +  L +   W          D +EL +     +D   L + + +  D G
Sbjct: 542 STVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTVDKDHLVVADVNDDDGG 593

Query: 754 EYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGAT 803
            Y CV  +T+  +S    + V  P          P  P  +++ +    S  + WT G  
Sbjct: 594 TYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQLSWTPGDD 653

Query: 804 NGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
           N  PIT + I      +    W + +E V G +          + +  L P+  Y F+V+
Sbjct: 654 NNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------TAQLKLSPYVNYAFRVM 703

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N LG   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + Y
Sbjct: 704 AVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESNGPGLQY 763

Query: 922 KIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           K+ WR+K+ D E+ S  +    NV   +V     F    Y VKVQA+NDVG  PE  V
Sbjct: 764 KVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNDVGFAPEPAV 816



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +N N          I K
Sbjct: 830 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   ++TP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|221316760|ref|NP_001137435.1| neural cell adhesion molecule L1 isoform 3 precursor [Homo sapiens]
 gi|119593193|gb|EAW72787.1| L1 cell adhesion molecule, isoform CRA_a [Homo sapiens]
          Length = 1248

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 204/810 (25%), Positives = 341/810 (42%), Gaps = 73/810 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 31  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 90

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 91  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 146

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 147 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 205

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 206 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 263

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 264 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 323

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 324 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 375

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 376 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 432

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N          L V    +   Q P          +   C A  +  L  +  W  +
Sbjct: 493 LAANDQNNVTIMANLKVKDA-TQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGD 551

Query: 719 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V G 
Sbjct: 552 G-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGS 606

Query: 778 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSE 828
           PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S       
Sbjct: 607 PGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------- 659

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P + 
Sbjct: 660 --LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKN 712

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V    
Sbjct: 713 PVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPF 767

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 768 LVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 797


>gi|302565106|ref|NP_001180609.1| neural cell adhesion molecule L1 precursor [Pan troglodytes]
          Length = 1257

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 203/813 (24%), Positives = 345/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 715 EKNPMDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|4557707|ref|NP_000416.1| neural cell adhesion molecule L1 isoform 1 precursor [Homo sapiens]
 gi|1705571|sp|P32004.2|L1CAM_HUMAN RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
           Short=NCAM-L1; AltName: CD_antigen=CD171; Flags:
           Precursor
 gi|472989|emb|CAA82564.1| neural cell adhesion molecule L1 [Homo sapiens]
 gi|3068548|gb|AAC14352.1| L1 cell adhesion molecule [Homo sapiens]
 gi|116496991|gb|AAI26230.1| L1 cell adhesion molecule [Homo sapiens]
 gi|119593194|gb|EAW72788.1| L1 cell adhesion molecule, isoform CRA_b [Homo sapiens]
 gi|168270912|dbj|BAG10249.1| neural cell adhesion molecule L1 precursor [synthetic construct]
 gi|187951475|gb|AAI36448.1| L1 cell adhesion molecule [Homo sapiens]
          Length = 1257

 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 204/810 (25%), Positives = 341/810 (42%), Gaps = 73/810 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N          L V    +   Q P          +   C A  +  L  +  W  +
Sbjct: 498 LAANDQNNVTIMANLKVKDA-TQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGD 556

Query: 719 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V G 
Sbjct: 557 G-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGS 611

Query: 778 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSE 828
           PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S       
Sbjct: 612 PGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------- 664

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P + 
Sbjct: 665 --LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKN 717

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V    
Sbjct: 718 PVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPF 772

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 773 LVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|350588952|ref|XP_003482753.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Sus scrofa]
          Length = 1180

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 225/838 (26%), Positives = 346/838 (41%), Gaps = 96/838 (11%)

Query: 185 KIPRGPYFIK---QPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYV 234
           ++P  P  ++   QP  +     K  I++   +I + C A G P PS+ W +     D  
Sbjct: 31  EVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDID 90

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G L IN   D +     G Y C A N+ G+ IS ++ + 
Sbjct: 91  KDPLVT----------MKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIR 140

Query: 292 FGFIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 +  ++  P          + C PP   P    +W  + F   + + +RV    +
Sbjct: 141 SSRSPLWTKEKLEPMTLRSGQSLVLPCRPPMGLPPPIIFWMDNSF-QRLPQSERVSQGLN 199

Query: 351 GALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-- 407
           G LYFS +   DA  +Y C  +   + T +      +KV         K     P TF  
Sbjct: 200 GDLYFSNVLPEDAREDYICYARFNHTQTIQQKQPISVKV------TSAKPHRERPPTFLT 253

Query: 408 PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKV 460
           PE   +      G+ + LEC+A G P P   W +    LP N  ++ NF + L I  V  
Sbjct: 254 PEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKTLQIIQVTE 313

Query: 461 EDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTY 520
            D G Y C A N   A+  +++++++A P + I   +  +    D T  C A G P    
Sbjct: 314 ADSGNYQCIAKNTLGAIHHTISVTVKAAPYWIIAPQNLVLSPGEDGTLICRANGNPKPRI 373

Query: 521 SWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQ 579
           SW  NG  +  E  P +D  R    D   TI + N  ER  ++YQC A N+     ++A 
Sbjct: 374 SWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVYQCNASNEYGYLLANAF 427

Query: 580 LRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
           + VL   P        + T      +   F  C    +P P   W K     GS  R  I
Sbjct: 428 VNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAK--GSALREDI 482

Query: 638 F---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
           +   ENG L I    +D +G Y+C A N  GM +++  L +   P+   + P    +   
Sbjct: 483 YILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQPEYAVVQRG 541

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDGGLLEITNASFADAG 753
             +   C    +  L +   W          D +EL +     +D   L + + +  D G
Sbjct: 542 STVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTVDKDHLVVADVNDDDGG 593

Query: 754 EYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGAT 803
            Y CV  +T+  +S    + V  P          P  P  +++ +    S  + WT G  
Sbjct: 594 TYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQLSWTPGDD 653

Query: 804 NGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
           N  PIT + I      +    W + +E V G +          + +  L P+  Y F+V+
Sbjct: 654 NNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------TAQLKLSPYVNYAFRVM 703

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N LG   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + Y
Sbjct: 704 AVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESNGPGLQY 763

Query: 922 KIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           K+ WR+K+ D E+ S  +    NV   +V     F    Y VKVQA+NDVG  PE  V
Sbjct: 764 KVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNDVGFAPEPAV 816



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +N N          I K
Sbjct: 830 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   ++TP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|449490690|ref|XP_004175373.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2 [Taeniopygia guttata]
          Length = 944

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 215/833 (25%), Positives = 339/833 (40%), Gaps = 100/833 (12%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP+  +F   + S    +TL+C A   P  +Y   K            +DP  +
Sbjct: 31  GPVFEEQPSHTLF--PEGSAEEKVTLACRARANPPATYRKLK------------LDP--E 74

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R+ L  G+L+I++P   ++ GSY C A N  G+ +S    L FGF+ EF+ + R P   
Sbjct: 75  SRYRLVSGDLVISNPVTSKEYGSYQCVAFNSRGTWVSMEASLRFGFLQEFSAEERDPVKI 134

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            + WG    C PP +YPG++Y W  + FPNF+  D R F+S   G LY +  E  D GNY
Sbjct: 135 TEGWGVMFTCSPPPHYPGLSYRWLLNEFPNFIPADGRRFISQTTGNLYIAKTEASDLGNY 194

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKF-----PNNFPKTFPEAPKAGDKVRLEC 421
           SC   S +        F    VF  S F +L       P+            G  +R  C
Sbjct: 195 SCFATSHID-------FITKSVF--SKFSRLSLAAEAQPDWLDVISDTEADIGSDLRWSC 245

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           VA G P P+  W R G PL      E     L    + +ED G Y C A N    + +S 
Sbjct: 246 VASGKPRPTVRWLRDGQPLTSQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASA 305

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP--DVTYSW--------FRNGE---- 527
            +++Q     T+  +   ++   +LT  C A   P  D+T++W        F   E    
Sbjct: 306 ELTVQDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDFPIDFDKSEGHYR 365

Query: 528 -LLNSETLPLEDQDRYFIQ----------DNVLTIRYLNPE----------RDPAMYQCR 566
                  L     DR F            D   + +++  E           D   Y+C 
Sbjct: 366 RASAGPELSPGSPDRLFRSPVPQIKWTKLDGPQSSKWIGSEPXLQIQHAGFDDEGTYECE 425

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
           A+N  K R +     ++  +P +    + S+T A  G ++   C     P+P   W +D 
Sbjct: 426 AENA-KGRDTHQGRIIIHAQPDWLD--VISDTEADIGSDLRWSCVASGKPRPTVRWLRDE 482

Query: 627 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
             + S  R ++        S +  +DSG+Y C A N HG   +   L V      +   P
Sbjct: 483 QPLTSQNRIEV-SGWRAEFSKLVLEDSGMYQCVAENKHGTVYASAELTVQALAPDFRLNP 541

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
            K  I A R+ ++              +WT      G   L       I  DG L+ + N
Sbjct: 542 VKRLIPAARSGKVIIPCQPRAAPKATVLWTK-----GTELLVNSSRVTITADGTLI-LQN 595

Query: 747 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 806
            S +D G+Y C  ++ +GK ++   + V            + +  +SA I   +  T   
Sbjct: 596 ISKSDEGKYTCFAENFMGKANSTGILSVR-------DATKITLAPSSADINVGENLTLQC 648

Query: 807 PITHYKIIART-NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW--STYEFKVIAG 863
             +H   +  T  W+   F +       + D+  G    +    L+PW  ++  +   +G
Sbjct: 649 HASHDPTMDLTFTWSLDDFPI-------DFDKSEGHYRRASACELIPWMDTSRVWPATSG 701

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N   +G  S PS +  T   +P  AP R+        ++ +SWEP+ + +     + Y+I
Sbjct: 702 N---WGA-SLPSSKIRTKEAEPKAAPYRVIAKSVLSSEMDVSWEPVEQGEMTGVLLGYEI 757

Query: 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            + K  D E  ++ ++  G V  A  R+      T+Y V V+A N  G GP S
Sbjct: 758 RYWKDGDKEEAADRVRTAGLVTSA--RVTGLNPNTDYHVSVRAYNRAGTGPPS 808



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 23/229 (10%)

Query: 158 EASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFI-KQP--TDVVFDLSKRSILNDITL 214
           E  +Q  H   +D+ TY+   +        +G   I  QP   DV+ D ++  I +D+  
Sbjct: 406 EPXLQIQHAGFDDEGTYECEAENAKGRDTHQGRIIIHAQPDWLDVISD-TEADIGSDLRW 464

Query: 215 SCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL-SDKRFTLSGGNLIINDPRQVEDRGSYH 273
           SC A G P P+  W +++            PL S  R  +SG     +    +ED G Y 
Sbjct: 465 SCVASGKPRPTVRWLRDE-----------QPLTSQNRIEVSGWRAEFSK-LVLEDSGMYQ 512

Query: 274 CKASNKFGSIISESVQLAFGFIGEFNLKRAPE-IGNQNWGKAMFCDPPTNYPGVNYYWAR 332
           C A NK G++ + +         +F L      I     GK +    P   P     W +
Sbjct: 513 CVAENKHGTVYASAELTVQALAPDFRLNPVKRLIPAARSGKVIIPCQPRAAPKATVLWTK 572

Query: 333 DYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC---NVQSKVSDTG 378
                 +    RV ++ DG L    + + D G Y+C   N   K + TG
Sbjct: 573 GT--ELLVNSSRVTITADGTLILQNISKSDEGKYTCFAENFMGKANSTG 619


>gi|119593195|gb|EAW72789.1| L1 cell adhesion molecule, isoform CRA_c [Homo sapiens]
          Length = 1255

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 205/811 (25%), Positives = 343/811 (42%), Gaps = 75/811 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 717
            A N          L V       +   P+ TI      +   C A  +  L  +  W  
Sbjct: 498 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 555

Query: 718 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V G
Sbjct: 556 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 610

Query: 777 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 827
            PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S      
Sbjct: 611 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 664

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
              +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P +
Sbjct: 665 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 716

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
            P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V   
Sbjct: 717 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 771

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 772 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|397466242|ref|XP_003804874.1| PREDICTED: neural cell adhesion molecule L1 [Pan paniscus]
          Length = 1257

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 203/813 (24%), Positives = 345/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 715 EKNPMDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|348568091|ref|XP_003469832.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Cavia
           porcellus]
          Length = 1211

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 227/874 (25%), Positives = 359/874 (41%), Gaps = 106/874 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV   + P S        G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
               G Y C A N+ G+ IS ++ +       +  ++   I  QN    +  C PP   P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLP 174

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPF 383
               +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +    
Sbjct: 175 PAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233

Query: 384 FPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECV 422
             LKV                + F   K     P TF  PE   +      G+ + LEC+
Sbjct: 234 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNASRKEELRGNVLSLECI 293

Query: 423 AFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G P P   W +    LP N  ++ NF + L I  V   D G Y C A N    +  ++
Sbjct: 294 AEGLPTPLIYWIKEDGTLPANRTFYRNFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTI 353

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           +++++A P + +   +  +    D T  C A G P    SW  NG  + +E  P +D  R
Sbjct: 354 SVTVKAAPYWIMAPRNLVLSPGEDGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSR 410

Query: 542 YFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
               D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +    
Sbjct: 411 RIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQV 466

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYS 657
                  + C    +P P   W K     GS     I+   ENG L I    +D+SG Y+
Sbjct: 467 IANRPAFLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYT 524

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N  G+ +++  L +   P+   + P    +     +   C    +  L     W  
Sbjct: 525 CVARNKLGVAKNEVHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLK 583

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           +   + N +          +D   L +T+   +D G Y CV  +T+ ++S    + V  P
Sbjct: 584 DNGELPNDE-------RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAP 636

Query: 778 ----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFN 825
                     P  P  +++ +    S  + WT G  N  PIT + I      +    W +
Sbjct: 637 TPTPAPIYDVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHH 696

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
            +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +P
Sbjct: 697 QAE----------VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEP 746

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNV 944
            + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV
Sbjct: 747 DKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANV 803

Query: 945 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              +V     F    Y +KVQA+N +G  PE  V
Sbjct: 804 SKYIVSGTPTF--VPYLIKVQALNVMGFAPEPAV 835


>gi|158260531|dbj|BAF82443.1| unnamed protein product [Homo sapiens]
          Length = 1257

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 204/810 (25%), Positives = 341/810 (42%), Gaps = 73/810 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VTLQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N          L V    +   Q P          +   C A  +  L  +  W  +
Sbjct: 498 LAANDQNNVTIMANLKVKDA-TQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGD 556

Query: 719 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V G 
Sbjct: 557 G-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGS 611

Query: 778 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSE 828
           PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S       
Sbjct: 612 PGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------- 664

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P + 
Sbjct: 665 --LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKN 717

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V    
Sbjct: 718 PVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPF 772

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 773 LVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|348568089|ref|XP_003469831.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Cavia
           porcellus]
          Length = 1256

 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 221/848 (26%), Positives = 349/848 (41%), Gaps = 97/848 (11%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV   + P S        G LIIN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT--MKPGS--------GTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 +  ++   I  QN    +  C PP   P    +W  + F   + + +RV    +
Sbjct: 135 PSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLN 193

Query: 351 GALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQ 396
           G LYFS  L +    +Y C  +   + T +      LKV                + F  
Sbjct: 194 GDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYG 253

Query: 397 LKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFE 447
            K     P TF  PE   +      G+ + LEC+A G P P   W +    LP N  ++ 
Sbjct: 254 AKSSKERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYR 313

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
           NF + L I  V   D G Y C A N    +  +++++++A P + +   +  +    D T
Sbjct: 314 NFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKAAPYWIMAPRNLVLSPGEDGT 373

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCR 566
             C A G P    SW  NG  + +E  P +D  R    D   TI + N  ER  A+YQC 
Sbjct: 374 LICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFSNVQERSSAVYQCN 427

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
           A N+     ++A + VL   P     P  +           + C    +P P   W K  
Sbjct: 428 ASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGA 486

Query: 627 NIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
              GS     I+   ENG L I    +D+SG Y+C A N  G+ +++  L +   P+   
Sbjct: 487 K--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPTRIL 543

Query: 684 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 743
           + P    +     +   C    +  L     W  +   + N +          +D   L 
Sbjct: 544 KQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE-------RFTVDKDHLV 596

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTS 793
           +T+   +D G Y CV  +T+ ++S    + V  P          P  P  +++ +    S
Sbjct: 597 VTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQLDKS 656

Query: 794 ATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLV 851
             + WT G  N  PIT + I      +    W + +E              + + +  L 
Sbjct: 657 VQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE----------VSGTQTTAQLKLS 706

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL  
Sbjct: 707 PYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNG 766

Query: 912 EKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            + N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+N +
Sbjct: 767 FESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNVM 821

Query: 971 GPGPESEV 978
           G  PE  V
Sbjct: 822 GFAPEPAV 829


>gi|13435353|ref|NP_076493.1| neural cell adhesion molecule L1 isoform 2 precursor [Homo sapiens]
 gi|347807|gb|AAA59476.1| cell adhesion molecule L1 [Homo sapiens]
          Length = 1253

 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 204/810 (25%), Positives = 341/810 (42%), Gaps = 73/810 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N          L V    +   Q P          +   C A  +  L  +  W  +
Sbjct: 498 LAANDQNNVTIMANLKVKDA-TQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGD 556

Query: 719 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V G 
Sbjct: 557 G-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGS 611

Query: 778 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSE 828
           PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S       
Sbjct: 612 PGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------- 664

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P + 
Sbjct: 665 --LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKN 717

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V    
Sbjct: 718 PVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPF 772

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 773 LVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|33354081|dbj|BAC81124.1| L1 cell adhesion molecule [Pongo pygmaeus]
          Length = 1255

 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 202/813 (24%), Positives = 345/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 34  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 93

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 94  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 149

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 150 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 208

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 209 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 266

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  +  ED GEY C A N   +   +  ++
Sbjct: 267 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKLGEEDDGEYRCLAENSLGSARHAYYVT 326

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 327 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 378

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 379 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 435

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 436 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 495

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 496 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 551

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 552 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 606

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 607 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 662

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 663 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 712

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 713 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 767

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 768 DPFLMVSNTSTFVPYEIKVQAVNSQGKGPEPQV 800


>gi|395754610|ref|XP_003779806.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Pongo
           abelii]
          Length = 1248

 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 202/813 (24%), Positives = 345/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 31  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 90

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 91  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 146

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 147 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 205

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 206 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 263

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  +  ED GEY C A N   +   +  ++
Sbjct: 264 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKLGEEDDGEYRCLAENSLGSARHAYYVT 323

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 324 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 375

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 376 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 432

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 493 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 548

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 549 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 604 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 659

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 660 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 709

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 710 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 764

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 765 DPFLMVSNTSTFVPYEIKVQAVNSQGKGPEPQV 797


>gi|4732113|gb|AAD28610.1|AF129167_1 neural cell adhesion molecule L1 [Chlorocebus aethiops]
          Length = 1248

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 205/814 (25%), Positives = 341/814 (41%), Gaps = 81/814 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 31  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 90

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 91  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 146

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 147 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 205

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 206 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 263

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 264 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 323

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 324 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPMEELAKDQ 375

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +    P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 376 KYRIQRGALILSNAQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 432

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLRANDTGRYLC 492

Query: 659 TATNVHGMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
            A N     +     IV H      +   Q P          +   C A  +  L  +  
Sbjct: 493 LAAN-----DQNNVTIVAHLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSIT 547

Query: 715 WTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           W  +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++
Sbjct: 548 WRGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLL 602

Query: 774 VEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWF 824
           V G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S   
Sbjct: 603 VVGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS--- 659

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
                 +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   
Sbjct: 660 ------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAA 708

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 944
           P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V
Sbjct: 709 PEKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----V 763

Query: 945 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 764 SDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 797


>gi|348568087|ref|XP_003469830.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Cavia
           porcellus]
          Length = 1304

 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 227/874 (25%), Positives = 359/874 (41%), Gaps = 106/874 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV   + P S        G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
               G Y C A N+ G+ IS ++ +       +  ++   I  QN    +  C PP   P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQNGQPLVLPCRPPIGLP 174

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPF 383
               +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +    
Sbjct: 175 PAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233

Query: 384 FPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECV 422
             LKV                + F   K     P TF  PE   +      G+ + LEC+
Sbjct: 234 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNASRKEELRGNVLSLECI 293

Query: 423 AFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
           A G P P   W +    LP N  ++ NF + L I  V   D G Y C A N    +  ++
Sbjct: 294 AEGLPTPLIYWIKEDGTLPANRTFYRNFQKTLQIIQVSEADSGNYQCIAKNTLGIIRHTI 353

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           +++++A P + +   +  +    D T  C A G P    SW  NG  + +E  P +D  R
Sbjct: 354 SVTVKAAPYWIMAPRNLVLSPGEDGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSR 410

Query: 542 YFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
               D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +    
Sbjct: 411 RIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQV 466

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYS 657
                  + C    +P P   W K     GS     I+   ENG L I    +D+SG Y+
Sbjct: 467 IANRPAFLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYT 524

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N  G+ +++  L +   P+   + P    +     +   C    +  L     W  
Sbjct: 525 CVARNKLGVAKNEVHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLK 583

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           +   + N +          +D   L +T+   +D G Y CV  +T+ ++S    + V  P
Sbjct: 584 DNGELPNDE-------RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAP 636

Query: 778 ----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFN 825
                     P  P  +++ +    S  + WT G  N  PIT + I      +    W +
Sbjct: 637 TPTPAPIYDVPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHH 696

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
            +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +P
Sbjct: 697 QAE----------VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEP 746

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNV 944
            + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV
Sbjct: 747 DKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANV 803

Query: 945 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              +V     F    Y +KVQA+N +G  PE  V
Sbjct: 804 SKYIVSGTPTF--VPYLIKVQALNVMGFAPEPAV 835


>gi|395754608|ref|XP_003779805.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Pongo
           abelii]
          Length = 1253

 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 202/813 (24%), Positives = 345/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  +  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKLGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 715 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 770 DPFLMVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|297711417|ref|XP_002832333.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Pongo
           abelii]
          Length = 1257

 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 202/813 (24%), Positives = 345/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  +  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKLGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 715 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 770 DPFLMVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|350591364|ref|XP_003483254.1| PREDICTED: contactin-6-like [Sus scrofa]
          Length = 438

 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 192/368 (52%), Gaps = 14/368 (3%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C PP ++  ++Y W  +  P +V+EDKR FVS + G LY + +E  D GNY+C +
Sbjct: 42  GVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNYTCFI 101

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG--DKVRLECVAFGYPV 428
            +K +     GP  P  +   ++    ++       FPE  +A     V+LEC A G PV
Sbjct: 102 TNKEAQRSVQGP--PTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPV 159

Query: 429 PSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           P  +W R  GSPLP    +     IL IPN + ED+G Y C A N R    +   +   A
Sbjct: 160 PDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYA 219

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
            P +   + + ++     L W C+A G P+  Y+W +NGE LN E       +R  I++ 
Sbjct: 220 PPEWEQKIQNTYLSIYDSLFWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENG 272

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            L I  LN   D  +YQC A+N+ +  Y++A+LRVL   P F K P++  +    GG++ 
Sbjct: 273 TLIITMLNVS-DSGIYQCAAENKYQIVYANAELRVLASAPDFSKNPVKKNSVVQVGGDIA 331

Query: 608 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
           I C P A P+    WK+    +    R  + E+G+L I  V+R D+G+Y+C ATN  G+ 
Sbjct: 332 IECKPNAFPRATISWKRGMENLRQSKRVFLMEDGSLKIYNVTRSDAGLYTCVATNQFGVA 391

Query: 668 ESKGRLIV 675
           ++ G LIV
Sbjct: 392 KNTGSLIV 399



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 142/369 (38%), Gaps = 48/369 (13%)

Query: 430 SYNWTRRGSPL----PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485
           SY WT   +PL     +  +       L I  V+  D G Y C  +N  +        S+
Sbjct: 57  SYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQR------SV 110

Query: 486 QAEPNFTIPLTDKHMD-----------------NQADLTWTCEAFGVPDVTYSWFRNGEL 528
           Q  P   +  TD  M                    + +   C A G P    SW R    
Sbjct: 111 QGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRR---- 166

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
              +  PL  + +Y     +L I     E D   Y+C A N      +  QL +    P 
Sbjct: 167 --LDGSPLPGKVKYSKSQAILEIPNFQQE-DEGFYECIAGNLRGRNLAKGQL-IFYAPPE 222

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV 648
           ++++     TY     ++   C     P P + W K+G  +    R +I ENG L+I+ +
Sbjct: 223 WEQKI--QNTYLSIYDSLFWECKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITML 279

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTE 706
           +  DSGIY C A N + +  +   L VL     + + P K    +    ++ + C  +  
Sbjct: 280 NVSDSGIYQCAAENKYQIVYANAELRVLASAPDFSKNPVKKNSVVQVGGDIAIECKPNAF 339

Query: 707 ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
               +++       + G  +L + +   +  DG  L+I N + +DAG Y CV  +  G  
Sbjct: 340 PRATISW-------KRGMENLRQSKRVFLMEDGS-LKIYNVTRSDAGLYTCVATNQFGVA 391

Query: 767 STKTTVIVE 775
               ++IV+
Sbjct: 392 KNTGSLIVK 400



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI + +   C A G PNP Y W K     +RL     +P  ++R  +  G LII     V
Sbjct: 233 SIYDSLFWECKASGKPNPWYTWLKNG---ERL-----NP--EERIQIENGTLIIT-MLNV 281

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEF--NLKRAPEIGNQNWGKAMFCDPPTNYP 324
            D G Y C A NK+  + + +         +F  N  +   +       A+ C  P  +P
Sbjct: 282 SDSGIYQCAAENKYQIVYANAELRVLASAPDFSKNPVKKNSVVQVGGDIAIECK-PNAFP 340

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
                W R      + + KRVF+  DG+L    + + DAG Y+C V +      +N    
Sbjct: 341 RATISWKRGM--ENLRQSKRVFLMEDGSLKIYNVTRSDAGLYTC-VATNQFGVAKNTGSL 397

Query: 385 PLKVF 389
            +KVF
Sbjct: 398 IVKVF 402



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 30/195 (15%)

Query: 602 EGGNVTIFCNPEAAPKPKF-----VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDS 653
           EG  V + C     P P F      W  + N +     ++ F   E GNL I+ V   D 
Sbjct: 39  EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDV 94

Query: 654 GIYSCTATNVHGMDESKG----------RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           G Y+C  TN       +G           ++  + P    + P  I  A   +++L C A
Sbjct: 95  GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 154

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
               + D+++         G +  ++ +         +LEI N    D G YEC+  +  
Sbjct: 155 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLR 206

Query: 764 GKISTKTTVIVEGPP 778
           G+   K  +I   PP
Sbjct: 207 GRNLAKGQLIFYAPP 221



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 109/283 (38%), Gaps = 32/283 (11%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVED 268
           + + L C+A G P P   W + D            PL  K    S    I+  P  Q ED
Sbjct: 146 SSVKLECFALGNPVPDISWRRLDG----------SPLPGK-VKYSKSQAILEIPNFQQED 194

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWG--KAMFCD-PPTNYPG 325
            G Y C A N  G  +++  QL F    E+  K    I N       ++F +   +  P 
Sbjct: 195 EGFYECIAGNLRGRNLAKG-QLIFYAPPEWEQK----IQNTYLSIYDSLFWECKASGKPN 249

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             Y W ++     +  ++R+ +  +G L  + L   D+G Y C  ++K      N     
Sbjct: 250 PWYTWLKN--GERLNPEERIQIE-NGTLIITMLNVSDSGIYQCAAENKYQIVYANAELRV 306

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA- 444
           L   P        F  N P       + G  + +EC    +P  + +W R    L ++  
Sbjct: 307 LASAPD-------FSKN-PVKKNSVVQVGGDIAIECKPNAFPRATISWKRGMENLRQSKR 358

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
            F   +  L I NV   D G Y C A+N     +++ ++ ++ 
Sbjct: 359 VFLMEDGSLKIYNVTRSDAGLYTCVATNQFGVAKNTGSLIVKV 401


>gi|338723805|ref|XP_003364801.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Equus
           caballus]
          Length = 1183

 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 228/842 (27%), Positives = 352/842 (41%), Gaps = 95/842 (11%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV   + P S        G L IN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT--MKPGS--------GTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  +N G+A+   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLRN-GQALVLPCSPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
            +K     P TF  PE   +      G+ + LEC+A G P P   W +    LP N  ++
Sbjct: 253 GVKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
            NF + L I  V   D G Y C A N   A+  +++++++A P + +   +  +    D 
Sbjct: 313 RNFKKTLQILQVSEADSGNYQCIAKNALGAIHHTISVTVKAAPYWIMAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGKPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 622
            A N+     ++A + VL   P    R L S    Y        +  C    +P P   W
Sbjct: 427 NASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTIEW 482

Query: 623 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
            K     GS  R  I+   ENG L I    +D +G Y+C A N  GM +++  L +   P
Sbjct: 483 FKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 539

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 739
           +   + P    +     +   C    +  L     W  +   + N            +D 
Sbjct: 540 TRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDG-------RFTVDK 592

Query: 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
             L +T+ S  D G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT
Sbjct: 593 DHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVDVPNPPFDLELTDQLDKSVQLSWT 652

Query: 800 DGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
            G  N  PIT + I      +    W + +E              + + +  L P+  Y 
Sbjct: 653 PGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQTTAQLKLSPYVNYS 702

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F+V+A N LG   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P
Sbjct: 703 FRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGP 762

Query: 918 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE 
Sbjct: 763 GLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEP 817

Query: 977 EV 978
            V
Sbjct: 818 AV 819


>gi|387849148|ref|NP_001248708.1| L1 cell adhesion molecule precursor [Macaca mulatta]
 gi|380812680|gb|AFE78214.1| neural cell adhesion molecule L1 isoform 1 precursor [Macaca
           mulatta]
          Length = 1257

 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 203/813 (24%), Positives = 343/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPMEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +    P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNAQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYV 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 715 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|384942430|gb|AFI34820.1| neural cell adhesion molecule L1 isoform 3 precursor [Macaca
           mulatta]
 gi|387540646|gb|AFJ70950.1| neural cell adhesion molecule L1 isoform 3 precursor [Macaca
           mulatta]
          Length = 1248

 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 203/813 (24%), Positives = 343/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 31  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 90

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 91  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 146

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 147 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 205

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 206 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 263

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 264 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 323

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 324 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPMEELAKDQ 375

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +    P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 376 KYRIQRGALILSNAQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYV 432

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 493 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 548

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 549 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 604 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 659

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 660 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 709

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 710 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 764

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 765 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 797


>gi|281183300|ref|NP_001162516.1| neural cell adhesion molecule L1 [Papio anubis]
 gi|160213446|gb|ABX10974.1| L1 cell adhesion molecule, isoform 1 (predicted) [Papio anubis]
          Length = 1324

 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 203/813 (24%), Positives = 343/813 (42%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 103 VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 162

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 163 TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 218

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 219 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 277

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 278 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 335

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 336 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 395

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 396 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPMEELAKDQ 447

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +    P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 448 KYRIQRGALILSNAQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 504

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 505 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 564

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 565 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 620

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 621 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 675

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 676 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 731

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 732 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 781

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 782 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 836

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 837 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 869


>gi|350588950|ref|XP_003482752.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Sus scrofa]
          Length = 1211

 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 226/851 (26%), Positives = 348/851 (40%), Gaps = 103/851 (12%)

Query: 185 KIPRGPYFIK---QPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYV 234
           ++P  P  ++   QP  +     K  I++   +I + C A G P PS+ W +     D  
Sbjct: 31  EVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDID 90

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G L IN   D +     G Y C A N+ G+ IS ++ + 
Sbjct: 91  KDPLVT----------MKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIR 140

Query: 292 FGFIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 +  ++  P          + C PP   P    +W  + F   + + +RV    +
Sbjct: 141 SSRSPLWTKEKLEPMTLRSGQSLVLPCRPPMGLPPPIIFWMDNSF-QRLPQSERVSQGLN 199

Query: 351 GALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQ 396
           G LYFS +   DA  +Y C  +   + T +      +KV                + F  
Sbjct: 200 GDLYFSNVLPEDAREDYICYARFNHTQTIQQKQPISVKVTSVDELNDTIAANLSDTEFYG 259

Query: 397 LKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFE 447
            K     P TF  PE   +      G+ + LEC+A G P P   W +    LP N  ++ 
Sbjct: 260 AKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYR 319

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
           NF + L I  V   D G Y C A N   A+  +++++++A P + I   +  +    D T
Sbjct: 320 NFKKTLQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKAAPYWIIAPQNLVLSPGEDGT 379

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCR 566
             C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  ++YQC 
Sbjct: 380 LICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVYQCN 433

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFVWKK 624
           A N+     ++A + VL   P        + T      +   F  C    +P P   W K
Sbjct: 434 ASNEYGYLLANAFVNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIEWFK 490

Query: 625 DGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
                GS  R  I+   ENG L I    +D +G Y+C A N  GM +++  L +   P+ 
Sbjct: 491 GAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTR 547

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDGG 740
             + P    +     +   C    +  L +   W          D +EL +     +D  
Sbjct: 548 IIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTVDKD 599

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 790
            L + + +  D G Y CV  +T+  +S    + V  P          P  P  +++ +  
Sbjct: 600 HLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQL 659

Query: 791 KTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIEN 848
             S  + WT G  N  PIT + I      +    W + +E V G +          + + 
Sbjct: 660 DRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------TAQL 709

Query: 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
            L P+  Y F+V+A N LG   PS  S QY T A +P + P+ + G G +  +L I+W+P
Sbjct: 710 KLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKP 769

Query: 909 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
           L   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y VKVQA+
Sbjct: 770 LSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQAL 824

Query: 968 NDVGPGPESEV 978
           NDVG  PE  V
Sbjct: 825 NDVGFAPEPAV 835



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +N N          I K
Sbjct: 849 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   ++TP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|390362028|ref|XP_001200741.2| PREDICTED: neuroglian-like isoform 1 [Strongylocentrotus
           purpuratus]
          Length = 1685

 Score =  216 bits (550), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 206/805 (25%), Positives = 340/805 (42%), Gaps = 72/805 (8%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           +TL+C A G P P+Y W K+         +L D  S+ R +L GGNL+I      +D G 
Sbjct: 41  LTLTCRATGIPEPTYYWEKD--------GSLFDVDSNDRASLDGGNLVIESLTTADD-GQ 91

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGK--AMFCDP----PTNYPG 325
           Y C A+N+ G+ +S+ +  +  F+ +F    AP +   + G+   + C      P   P 
Sbjct: 92  YQCFANNRLGTAMSQKIWTSLAFMEQFE-NTAPAMVQLSQGQPLKLRCGGSPGIPNGNPA 150

Query: 326 VNYYWARDYFPNF--VEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
              YW  D  P    +  + R+    +G L FS +   DA  Y C   + V    +  P 
Sbjct: 151 PLIYWT-DASPKHTSITYNARINQDLEGNLVFSNIIASDAKGYYCLAINNVVGLFQRSPK 209

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
             L V            ++ P    E        +L+C+AFGYP P   W R    L   
Sbjct: 210 IMLSVTDLPAVASAAHLDSHPAA-SEVANRTQSFKLKCIAFGYPTPVITWKRGEEQLQSG 268

Query: 444 AY--FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
                E   + L I  V+  D+G Y C ASN     E S  +++++ P F  P +DK   
Sbjct: 269 GRVSIEESGQALVISAVENSDEGTYTCVASNTGGDDEFSTVVTVESAPYFLAPPSDKTKG 328

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI---QDNVLTIRYLNPE- 557
               +   C + GVP  T  W  NG+        + D +R+ +      + TI   N + 
Sbjct: 329 PGESVDIECRSEGVPPPTVEWLVNGQTWADFESNI-DTERWTVVTGDPQLATIAITNLQT 387

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAP 616
            D  ++QC A N+ K   +S  L V++         PL       E  +    C+    P
Sbjct: 388 TDSNVFQCIATNKYKEELTSVVLNVVSFPARITSFTPLTRRLSVVEDDSAKFICHSRGRP 447

Query: 617 KPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATN-VHGMD-ESKGR- 672
            P   W   G+++ +G +  I E  G+L+I+ V + D G Y C A N + G D E+ G  
Sbjct: 448 DPTITWTFKGSVLTNGIKYTINETEGSLVINNVKKVDGGEYECRAENAIDGEDYEATGSA 507

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYIWTHNGVRI-GNMDLNEL 730
            + + G +     P  + I        +C   + EEL++    W  +G R+  N D    
Sbjct: 508 TLTMLGKTTIYLSPANLMIREGNTATFQCEITYDEELIEPYVYWMKDGQRLEANQD---- 563

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK-------ISTKTTVIVEGPPGLPGG 783
                      L I NA    +G Y CV+++T+ +       ++    +IV+G P  P  
Sbjct: 564 ---------NSLRIENAFCTHSGTYTCVLEATIDESAGTVHSVNASAKLIVKGRPESPQI 614

Query: 784 VQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTW-FNVSEHVIGKEVDRYTG 840
           + +  +  + +  + W  G  N  PI +Y +   T W +  W F  +E   G  + R   
Sbjct: 615 LMLRAKQQEFAMDLFWEPGNDNNAPIQYYIVQYDTKWADMHWQFQANETSGGLAIYRKV- 673

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIGGGGGKI 899
                    L P+  Y F+VIA NE+G  EPS+  +P +N     P   PS + G   + 
Sbjct: 674 -------LYLQPFVDYRFRVIAVNEIGESEPSAEVAPTFNPQVAPPSVNPSGVSGSSTRP 726

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETL--KEYGNVGIAVVR---IPS 953
             + I W+ +        + +Y++ +R +  +E F  +T+  +   +    +++   + +
Sbjct: 727 ESMVIRWQAIHPFYYGGDDFHYEVAYRPRISSEPFTKDTVYPENTDDNPTGIIQNYIVDA 786

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
                E+E  V+++N  GPGPE E+
Sbjct: 787 SKLCEEFEFSVRSVNSGGPGPEPEI 811



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 115/296 (38%), Gaps = 33/296 (11%)

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
           D +  LT TC A G+P+ TY W ++G L +     ++  DR  +    L I  L    D 
Sbjct: 36  DQRIPLTLTCRATGIPEPTYYWEKDGSLFD-----VDSNDRASLDGGNLVIESLTTADD- 89

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-----PEAA 615
             YQC A N+L T  S      L     F+     +     +G  + + C      P   
Sbjct: 90  GQYQCFANNRLGTAMSQKIWTSLAFMEQFENT-APAMVQLSQGQPLKLRCGGSPGIPNGN 148

Query: 616 PKPKFVWK----KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA-TNVHGMDESK 670
           P P   W     K  +I  +    +  E GNL+ S +   D+  Y C A  NV G+ +  
Sbjct: 149 PAPLIYWTDASPKHTSITYNARINQDLE-GNLVFSNIIASDAKGYYCLAINNVVGLFQRS 207

Query: 671 GRLIV-------LHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRI 722
            ++++       +   ++ +  P    +A   ++ +L+C A       + +       + 
Sbjct: 208 PKIMLSVTDLPAVASAAHLDSHPAASEVANRTQSFKLKCIAFGYPTPVITW-------KR 260

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           G   L      +I   G  L I+    +D G Y CV  +T G     T V VE  P
Sbjct: 261 GEEQLQSGGRVSIEESGQALVISAVENSDEGTYTCVASNTGGDDEFSTVVTVESAP 316



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 25/194 (12%)

Query: 798  WTDGATNGRPITHYKIIARTNW-NSTW-FNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
            W  G  N  PI +Y I   T W +  W F  +E   G  + R            L P+  
Sbjct: 843  WEPGNDNNAPIQYYIIQYDTKWADMHWQFQANETASGLAIYRKVL--------YLQPFVD 894

Query: 856  YEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            Y F+VIA NE+G  EPS+  +P  +     P + PS + G   +   + I W+ +     
Sbjct: 895  YRFRVIAVNEIGESEPSAEVAPTDDPQVAPPSKNPSGVSGSSTRPESMVIRWQAIHPFYY 954

Query: 915  NAPNIYYKIFWRKKNDTEFQSETLKEYGNVG----------IAVVRIPSEFYYTEYEVKV 964
               + +Y++ +R +  +E  ++   +  N            I   R P E    E+E  V
Sbjct: 955  GGDDFHYEVAYRPRLSSEPFTKATVDPENTDDNPTGIIQNYIVDARKPCE----EFEFSV 1010

Query: 965  QAINDVGPGPESEV 978
            +++N  GPGPE E+
Sbjct: 1011 RSMNSGGPGPEPEI 1024



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 23/217 (10%)

Query: 775  EGP-PGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
            EGP P  P  +Q+  +  + +  + W  G  N  PI +Y I   T W    +    +   
Sbjct: 1243 EGPHPDPPQNLQLRAKEQQFAMDLFWEPGNDNNAPIQYYIIQYDTKWADMHWQFQANETA 1302

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSR 891
             +V  Y  RK   ++    P+  Y F+VIA NE G  EPS+  +P  +     P   PS 
Sbjct: 1303 SDVPTY--RKVLYLQ----PFVDYRFRVIAVNEFGESEPSAEVAPTVDPEVAPPSINPSG 1356

Query: 892  IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETL----KEYGNVGI 946
            + G   +   + I W+ +     +    +Y++ +R +  +E F   T+     +    GI
Sbjct: 1357 VNGSSTRPESMVIRWQAIHPFYYSGDGFHYEVAYRPRLSSEPFTKATVYPENTDDNPTGI 1416

Query: 947  AVVRI-----PSEFYYTEYEVKVQAINDVGPGPESEV 978
                I     P E    E+E  V+++N  GPGPE E+
Sbjct: 1417 IQNYIVDASKPCE----EFEFSVRSMNSGGPGPEPEI 1449



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)

Query: 798  WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
            W  G  N  PI +Y I   T W    +    +    +V  Y  RK   ++    P+  Y 
Sbjct: 1056 WEPGNDNNAPIQYYIIQYDTKWADLHWQFQANETASDVSTY--RKVLHLQ----PFVDYR 1109

Query: 858  FKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
            F+VIA NE G  EPS+  +P  +     P   PS + G       + I W+ +       
Sbjct: 1110 FRVIAVNEFGESEPSAEVAPTVDPEVAPPSINPSGVNGNSTP-ESMVIRWQAIHPFYYGG 1168

Query: 917  PNIYYKIFWRKKNDTE-FQSETL--KEYGNVGIAVVR---IPSEFYYTEYEVKVQAINDV 970
             + +Y++ +R +  +E F  +T+  +   +    +++   + +   Y E+E  V+++N  
Sbjct: 1169 DDFHYEVAYRPRLSSEPFIKDTVYPENTDDNPTGIIQNYIVDARKPYEEFEFSVRSMNSG 1228

Query: 971  GPGPESEV 978
            GPGPE E+
Sbjct: 1229 GPGPEPEI 1236



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)

Query: 778  PGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST-W-FNVSEHVIGKE 834
            PG P  VQ+  +  + +  + W  G  N  PI +Y I   T W    W F  +E   G  
Sbjct: 1460 PGPPQNVQLRAKEQEFAMDLFWEAGNDNDAPIQYYIIQYNTKWTDMHWQFQANETSGGFA 1519

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIG 893
            + R            L P+  Y+F+VIA NE+G  +PS+  +P  +     P   PS + 
Sbjct: 1520 IYRKVL--------YLQPFVEYQFRVIAVNEIGESKPSAEVAPTVDPQVAPPSINPSGVN 1571

Query: 894  GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG-------- 945
            G       + I W+ +        + +Y++ +R +  +E  ++   +  N          
Sbjct: 1572 GSSTPESTI-IRWQAIHPFYYGGDDFHYEVAYRPRLSSEPFTKATVDPENTDDNPTGIIQ 1630

Query: 946  --IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              I     P E    E+E  V+++N  GPGPE EV
Sbjct: 1631 NYIVDASKPCE----EFEFSVRSMNSGGPGPEPEV 1661


>gi|426240195|ref|XP_004013999.1| PREDICTED: neurofascin [Ovis aries]
          Length = 1219

 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 220/873 (25%), Positives = 355/873 (40%), Gaps = 108/873 (12%)

Query: 177 GMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 235
           G  IE P  + + P   KQ   D + D       ++I + C A G P PS+ W +     
Sbjct: 21  GRAIEIPMDLSQPPTITKQSVKDHIVDPR-----DNILIECEAKGNPAPSFHWTRN---- 71

Query: 236 DRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQL 290
               +   +   D R ++    G L+I+     R  E  G Y C A NKFG+ +S  ++L
Sbjct: 72  ----SKFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRL 127

Query: 291 AFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347
                    + NL   P +  +     + C+PP   P    +W        + +DKRV  
Sbjct: 128 QVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQ 184

Query: 348 SYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVF---PHSNFQQLKFPNNF 403
            ++G LYFS +   D   +YSCN +   + T +    F LKV    P+++      P+ +
Sbjct: 185 GHNGDLYFSNVVLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMY 244

Query: 404 PK----------TFPEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
                        +P+   +      G  + LEC+A G P P   W ++G  LP + A F
Sbjct: 245 SARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKF 304

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           ENFN+ L I NV  ED GEY C ASN   ++  ++++ ++A P +     +  +    D 
Sbjct: 305 ENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDG 364

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
              C A G P  T  W  NGE L S      + +R    D ++        R  A+YQC 
Sbjct: 365 RLVCRANGNPKPTVQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCN 419

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626
           + N+     ++A + VL + P     P              + C    +P P   W K+G
Sbjct: 420 SSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 478

Query: 627 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
              GS   GG   ++ENG+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   
Sbjct: 479 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 535

Query: 684 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDL---------NELET 732
           ++P          +QL C    +  L +   W  +   + I N  L           L +
Sbjct: 536 RMPEDQVAKRGSTVQLECRVKHDPSLKLTVSWLKDDEPLYISNRSLLLPPCLLLSGALPS 595

Query: 733 P----------------NINIDGGLLEITNASFADAGEYECVVKSTVGKI---------S 767
           P                +++  G           D+ +  C   +  G           +
Sbjct: 596 PLLLVMRGRTCGSHVGVSLHRPGEQWAQARCRHQDSKQTACPALAAEGAREGLPDQATPT 655

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
            +   + +G P  P  +++ ++ + S  + W  G  N  PIT Y +     +    F   
Sbjct: 656 NRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG 711

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
              +  +  R+ G   +++   L P+  Y+F+VIA NE+G   PS PS +Y T    P  
Sbjct: 712 ---VWHDHSRFPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPES 767

Query: 888 APSRIGGGGGKIGDLSISW--EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            PS + G G +  ++ I+W     P   +  P    ++       +   +      G   
Sbjct: 768 NPSDVKGEGTRKNNMEITWTVRAPPARPRGLPG-SLRVPHHSCRLSPLGAGNTVAGGGPR 826

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             V + P    Y  YE++VQA ND G GPE + 
Sbjct: 827 YVVGQTP---VYVPYEIRVQAENDFGKGPEPDT 856


>gi|351708733|gb|EHB11652.1| Neural cell adhesion molecule L1, partial [Heterocephalus glaber]
          Length = 1214

 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 211/813 (25%), Positives = 341/813 (41%), Gaps = 80/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY----VQDRLVANLIDPLSDKR 250
           V+ + S R ++    +DI+L C A G P   + W K+       ++  V     P S   
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEARGKPEVQFRWMKDGTHFRPSEEPGVMVHEAPHSGS- 94

Query: 251 FTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQ 309
           FT++G N           +G Y C ASNK G+ +S  +QL A G          P    +
Sbjct: 95  FTITGNNSFAQ-----RFQGIYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVEE 149

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSC 368
                + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C
Sbjct: 150 GESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVSMGQNGNLYFANVLTSDNHSDYIC 208

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
           N     + T        L+V   ++      +L FP N           G  + LEC+A 
Sbjct: 209 NAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAE 266

Query: 425 GYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALES--SV 481
           G+P P+  W     P+P +   ++N N+ L + NV  +D GEY C A N          V
Sbjct: 267 GFPTPTIKWLFPSGPMPADRVIYQNHNKTLQLLNVGEQDDGEYHCLAENSLGIARHIYYV 326

Query: 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           T+     P +            A L   C+A G P    +W  NG  +      L+    
Sbjct: 327 TVEGTGSPEWRRGCHLYGPGETARLD--CQAQGRPQPEVTWRINGNRMEE----LDKDQT 380

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-A 600
           Y I    L +  + P  D  + QC A+N+     ++A + V+ L         +++TY A
Sbjct: 381 YQIHRGALILSNVQPS-DTMVTQCEARNRHGLLLTNAYIYVVQLPAKILTS--DNQTYMA 437

Query: 601 GEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 659
            EG    + C    AP P   W  ++G  +    R   + NG + I  +  +D+G Y C 
Sbjct: 438 VEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTMAIRDLQANDTGRYFCQ 497

Query: 660 ATNVHGMDESKGRLIV-LH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           A N    D++   ++  LH    +   Q P          +   C A  +  L  +  W 
Sbjct: 498 AAN----DQNNVTIVANLHVKEATQITQGPRNAIEKKGSRVTFTCQASFDPSLQRSITWR 553

Query: 717 HNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            +G      DL EL ++    I+ G L I +  ++D G Y CV  + + ++  +  ++V 
Sbjct: 554 GDG-----HDLQELGDSDKYFIEDGRLVIDSLDYSDQGNYSCVASTELDEVEGRAQLLVV 608

Query: 776 GPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNV 826
           G PG    V+V E H    +   + WT    +   I  Y I      +A   W       
Sbjct: 609 GSPGPVPHVEVSERHLGKHSQVHLSWTPAEDHNAAIEKYDIEFEDIEMAPEKW------- 661

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
             H +GK     T     S    L P+  Y F+V A N+ G GEPS PS    TP   P 
Sbjct: 662 --HSLGKVPGNQT-----STTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEAAPE 714

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVG 945
           + P+ + G G +  ++ I+W+PL     NAP + Y++ WR +     +Q +T+ +     
Sbjct: 715 KNPADVRGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQTVSD----- 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            + + + +   +  YE++VQA+N  G GPE +V
Sbjct: 770 -SFLVVTNTSTFEPYEIRVQAVNSQGKGPEPQV 801



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 137/610 (22%), Positives = 221/610 (36%), Gaps = 94/610 (15%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGS---PLPRNAYFENFNRILTIPNVKVEDQGEYICRA 470
           G+  RL+C A G P P   W   G+    L ++  ++     L + NV+  D     C A
Sbjct: 346 GETARLDCQAQGRPQPEVTWRINGNRMEELDKDQTYQIHRGALILSNVQPSDTMVTQCEA 405

Query: 471 SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT-------WTCEAFGVPDVTYSWF 523
            N    L ++  I +       +P      DNQ  +          C+AFG P  +  W 
Sbjct: 406 RNRHGLLLTNAYIYV-----VQLPAKILTSDNQTYMAVEGSTAYLLCKAFGAPVPSVQW- 459

Query: 524 RNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
                L+ E   +   +R+F   N  + IR L    D   Y C+A N        A L V
Sbjct: 460 -----LDEEGTTVLQDERFFPYANGTMAIRDLQ-ANDTGRYFCQAANDQNNVTIVANLHV 513

Query: 583 LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGR--RKIF 638
              K + +           +G  VT  C     P  +    W+ DG+ +   G   +   
Sbjct: 514 ---KEATQITQGPRNAIEKKGSRVTFTCQASFDPSLQRSITWRGDGHDLQELGDSDKYFI 570

Query: 639 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 698
           E+G L+I  +   D G YSC A+      E + +L+V+  P      P      + R+L 
Sbjct: 571 EDGRLVIDSLDYSDQGNYSCVASTELDEVEGRAQLLVVGSPG-----PVPHVEVSERHLG 625

Query: 699 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
                H          WT        ++  ++E  +I       E+    +   G+    
Sbjct: 626 KHSQVHLS--------WTPAEDHNAAIEKYDIEFEDI-------EMAPEKWHSLGKVPGN 670

Query: 759 VKSTVGKIST------KTTVIVEGPPGLPGGVQVVEV------HKTSATIQWTDGATNGR 806
             ST  K+S       + T I +  PG P       V       K  A ++     TN  
Sbjct: 671 QTSTTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPADVRGEGNETNNM 730

Query: 807 PITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST-----YEFK 859
            IT +K +   +WN+    + V     G    R   +++   ++ LV  +T     YE +
Sbjct: 731 VIT-WKPLRWMDWNAPQVQYRVQWRPQGT---RGPWQEQTVSDSFLVVTNTSTFEPYEIR 786

Query: 860 VIAGNELGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPR 911
           V A N  G G    P PQ     +  D P  +P        K+  L+     + W+P+  
Sbjct: 787 VQAVNSQGKG----PEPQVTIGYSGEDYPQVSPEL-----EKVKPLNSTAALVRWKPVAL 837

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV----VRIPSEFYYTEYEVKVQAI 967
            +       Y + +  +      S+     G+V +A     V +     Y+ Y V+V+A 
Sbjct: 838 AQVKGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSVILGGLRPYSSYHVEVRAF 897

Query: 968 NDVGPGPESE 977
           N  G GP  +
Sbjct: 898 NGRGSGPAGQ 907


>gi|403257020|ref|XP_003921136.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Saimiri
           boliviensis boliviensis]
          Length = 1183

 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 221/839 (26%), Positives = 348/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  QN G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP N   +
Sbjct: 253 GAKSNRERPPTFLTPEGNASSKEELRGNVLLLECIAEGLPTPLIYWAKEDGILPTNRTSY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P + +   +  +    D 
Sbjct: 313 KNFKKTLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIMAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFINVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM ++   L +   P++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +   + N +          +D   L
Sbjct: 543 IKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE-------RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            + + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
            A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 TAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 819


>gi|402864555|ref|XP_003896525.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Papio anubis]
          Length = 1183

 Score =  216 bits (549), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 223/839 (26%), Positives = 351/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +   P++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 IKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            I + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VIADVSDNDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 819



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A ++W         G   G  I ++K  + +  N          I K
Sbjct: 833 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958


>gi|350588954|ref|XP_003130319.3| PREDICTED: neuronal cell adhesion molecule isoform 1 [Sus scrofa]
          Length = 1304

 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 226/851 (26%), Positives = 348/851 (40%), Gaps = 103/851 (12%)

Query: 185 KIPRGPYFIK---QPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYV 234
           ++P  P  ++   QP  +     K  I++   +I + C A G P PS+ W +     D  
Sbjct: 31  EVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDID 90

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G L IN   D +     G Y C A N+ G+ IS ++ + 
Sbjct: 91  KDPLVT----------MKTGSGTLTINIMSDGKAETYEGVYQCTARNERGAAISNNIVIR 140

Query: 292 FGFIGEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD 350
                 +  ++  P          + C PP   P    +W  + F   + + +RV    +
Sbjct: 141 SSRSPLWTKEKLEPMTLRSGQSLVLPCRPPMGLPPPIIFWMDNSF-QRLPQSERVSQGLN 199

Query: 351 GALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQ 396
           G LYFS +   DA  +Y C  +   + T +      +KV                + F  
Sbjct: 200 GDLYFSNVLPEDAREDYICYARFNHTQTIQQKQPISVKVTSVDELNDTIAANLSDTEFYG 259

Query: 397 LKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFE 447
            K     P TF  PE   +      G+ + LEC+A G P P   W +    LP N  ++ 
Sbjct: 260 AKPHRERPPTFLTPEGNASRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYR 319

Query: 448 NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT 507
           NF + L I  V   D G Y C A N   A+  +++++++A P + I   +  +    D T
Sbjct: 320 NFKKTLQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKAAPYWIIAPQNLVLSPGEDGT 379

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCR 566
             C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  ++YQC 
Sbjct: 380 LICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVYQCN 433

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFVWKK 624
           A N+     ++A + VL   P        + T      +   F  C    +P P   W K
Sbjct: 434 ASNEYGYLLANAFVNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIEWFK 490

Query: 625 DGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
                GS  R  I+   ENG L I    +D +G Y+C A N  GM +++  L +   P+ 
Sbjct: 491 GAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTR 547

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDGG 740
             + P    +     +   C    +  L +   W          D +EL +     +D  
Sbjct: 548 IIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTVDKD 599

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 790
            L + + +  D G Y CV  +T+  +S    + V  P          P  P  +++ +  
Sbjct: 600 HLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQL 659

Query: 791 KTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIEN 848
             S  + WT G  N  PIT + I      +    W + +E V G +          + + 
Sbjct: 660 DRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------TAQL 709

Query: 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
            L P+  Y F+V+A N LG   PS  S QY T A +P + P+ + G G +  +L I+W+P
Sbjct: 710 KLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKP 769

Query: 909 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
           L   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y VKVQA+
Sbjct: 770 LSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQAL 824

Query: 968 NDVGPGPESEV 978
           NDVG  PE  V
Sbjct: 825 NDVGFAPEPAV 835



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +N N          I K
Sbjct: 849 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   ++TP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|297289132|ref|XP_001096098.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Macaca
           mulatta]
          Length = 1183

 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 223/839 (26%), Positives = 351/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +   P++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 IKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            I + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VIADVSDNDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 819


>gi|184185488|gb|ACC68891.1| neural cell adhesion molecule L1 precursor (predicted) [Rhinolophus
           ferrumequinum]
          Length = 1260

 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 200/812 (24%), Positives = 344/812 (42%), Gaps = 62/812 (7%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLID 244
           + + +P  +  +  +R ++   +DI+L C A G P   + W ++      ++ L   +  
Sbjct: 31  HHVMEPPVITEESPQRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQ 90

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
                 FT++G N       Q    G+Y C ASNK G+ +S  +QL      ++  +   
Sbjct: 91  APHSGSFTITGNNSNFAQRFQ----GTYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVK 146

Query: 305 EIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
            +  +     +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +
Sbjct: 147 PVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDN 205

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVR 418
             +Y C+     + T        L+V   ++      +L FP N         +    + 
Sbjct: 206 HSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRRPRLLFPANASSHLVALQE--QTLV 263

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC+A G+P P+  W R   P+P N   ++N N+ L + +V+ ED GEY C A N   + 
Sbjct: 264 LECIAEGFPTPTIKWLRPSGPMPPNRVTYQNHNKTLQLRDVREEDDGEYRCVAENSLGSD 323

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
             +  ++++A P +      +           C+  G P    +W  NG       +P+E
Sbjct: 324 RHAYYVTVEAAPYWLHKPQSRLYGPGETARLDCQVQGRPQPEVTWRING-------IPVE 376

Query: 538 D---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
           +     +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L P+    P 
Sbjct: 377 ELAKDQKYRIQHGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQL-PAKILTP- 433

Query: 595 ESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDD 652
           ++ETY A EG    + C    AP P   W  K+G  +    R   + NG L I  +  +D
Sbjct: 434 DNETYLAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQAND 493

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y C A N          L V       ++    I     R +   C A  +  L  +
Sbjct: 494 TGHYFCQAANDQNNVTIVANLQVKDATQIIQEPQNAIEKKGSR-VTFTCQASFDPSLQHS 552

Query: 713 YIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
             W  +G      +L EL ++    I+   L I +  ++D G Y CV  + +  +  +  
Sbjct: 553 ITWRRDG-----RNLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVERRAK 607

Query: 772 VIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNV 826
           ++V G PG    +++ + H   +    + W+    +  PI  Y I           W+++
Sbjct: 608 LLVVGSPGPVPRLELSDHHPPKQNQVQLSWSPADDHNSPIEKYDIEFEDQEMEPDKWYSL 667

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + V G +          S    L P+  Y F+V A N+ G GEPS  S    TP   P 
Sbjct: 668 GK-VPGNQT---------STTLKLSPYVRYTFRVTAINKYGPGEPSPASEPVVTPEAAPE 717

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946
           + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V  
Sbjct: 718 KNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRLQGTRGAWQEQI-----VSD 772

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             + + +   +  YE+KVQAIN  G GPE +V
Sbjct: 773 PFLVVSNTSTFVPYEIKVQAINSHGKGPEPQV 804


>gi|390362026|ref|XP_003730061.1| PREDICTED: neuroglian-like isoform 2 [Strongylocentrotus
           purpuratus]
          Length = 1685

 Score =  215 bits (548), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 206/805 (25%), Positives = 339/805 (42%), Gaps = 72/805 (8%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           +TL+C A G P P+Y W K+          L D  S+ R +L GGNL+I      +D G 
Sbjct: 41  LTLTCRATGIPEPTYYWEKD--------GALFDMDSNDRASLDGGNLVIESLTTADD-GQ 91

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGK--AMFCDP----PTNYPG 325
           Y C A+N+ G+ +S+ +  +  F+ +F    AP +   + G+   + C      P   P 
Sbjct: 92  YQCFANNRLGTAMSQKIWTSLAFMEQFE-NTAPAMVQLSQGQPLKLRCGGSPGIPNGNPA 150

Query: 326 VNYYWARDYFPNF--VEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
              YW  D  P    +  + R+    +G L FS +   DA  Y C   + V    +  P 
Sbjct: 151 PLIYWT-DASPKHTSITYNARINQDLEGNLVFSNIIASDAKGYYCLAINNVVGLFQRSPK 209

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
             L V            ++ P    E        +L+C+AFGYP P   W R    L   
Sbjct: 210 IMLSVTDLPAVASAAHLDSHPAA-SEVANRTQSFKLKCIAFGYPTPVITWKRGEEQLQSG 268

Query: 444 AY--FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
                E   + L I  V+  D+G Y C ASN     E S  +++++ P F  P +DK   
Sbjct: 269 GRVSIEESGQALVISAVENSDEGTYTCVASNTGGDDEFSTVVTVESAPYFLAPPSDKTKG 328

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI---QDNVLTIRYLNPE- 557
               +   C + GVP  T  W  NG+        + D +R+ +      + TI   N + 
Sbjct: 329 PGESVDIECRSEGVPPPTVEWLVNGQTWADFESNI-DTERWTVVTGDPQLATIAITNLQT 387

Query: 558 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAP 616
            D  ++QC A N+ K   +S  L V++         PL       E  +    C+    P
Sbjct: 388 TDSNVFQCIATNKYKEELTSVVLNVVSFPARITSFTPLTRRLSVVEDDSAKFICHSRGRP 447

Query: 617 KPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATN-VHGMD-ESKGR- 672
            P   W   G+++ +G +  I E  G+L+I+ V + D G Y C A N + G D E+ G  
Sbjct: 448 DPTITWTFKGSVLTNGIKYTINETEGSLVINNVKKVDGGEYECRAENAIDGEDYEATGSA 507

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYIWTHNGVRI-GNMDLNEL 730
            + + G +     P  + I        +C   + EEL++    W  +G R+  N D    
Sbjct: 508 TLTMLGKTTIYLSPANLMIREGNTATFQCEITYDEELIEPYVYWMKDGQRLEANQD---- 563

Query: 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK-------ISTKTTVIVEGPPGLPGG 783
                      L I NA    +G Y CV+++T+ +       ++    +IV+G P  P  
Sbjct: 564 ---------NSLRIENAFCTHSGTYTCVLEATIDESAGTVHSVNASAKLIVKGRPESPQI 614

Query: 784 VQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTW-FNVSEHVIGKEVDRYTG 840
           + +  +  + +  + W  G  N  PI +Y +   T W +  W F  +E   G  + R   
Sbjct: 615 LMLRAKQQEFAMDLFWEPGNDNNAPIQYYIVQYDTKWADMHWQFQANETSGGLAIYRKV- 673

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIGGGGGKI 899
                    L P+  Y F+VIA NE+G  EPS+  +P +N     P   PS + G   + 
Sbjct: 674 -------LYLQPFVDYRFRVIAVNEIGESEPSAEVAPTFNPQVAPPSVNPSGVSGSSTRP 726

Query: 900 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETL--KEYGNVGIAVVR---IPS 953
             + I W+ +        + +Y++ +R +  +E F  +T+  +   +    +++   + +
Sbjct: 727 ESMVIRWQAIHPFYYGGDDFHYEVAYRPRISSEPFTKDTVYPENTDDNPTGIIQNYIVDA 786

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
                E+E  V+++N  GPGPE E+
Sbjct: 787 SKLCEEFEFSVRSVNSGGPGPEPEI 811



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 115/296 (38%), Gaps = 33/296 (11%)

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
           D +  LT TC A G+P+ TY W ++G L +     ++  DR  +    L I  L    D 
Sbjct: 36  DQRIPLTLTCRATGIPEPTYYWEKDGALFD-----MDSNDRASLDGGNLVIESLTTADD- 89

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-----PEAA 615
             YQC A N+L T  S      L     F+     +     +G  + + C      P   
Sbjct: 90  GQYQCFANNRLGTAMSQKIWTSLAFMEQFENT-APAMVQLSQGQPLKLRCGGSPGIPNGN 148

Query: 616 PKPKFVWK----KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA-TNVHGMDESK 670
           P P   W     K  +I  +    +  E GNL+ S +   D+  Y C A  NV G+ +  
Sbjct: 149 PAPLIYWTDASPKHTSITYNARINQDLE-GNLVFSNIIASDAKGYYCLAINNVVGLFQRS 207

Query: 671 GRLIV-------LHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRI 722
            ++++       +   ++ +  P    +A   ++ +L+C A       + +       + 
Sbjct: 208 PKIMLSVTDLPAVASAAHLDSHPAASEVANRTQSFKLKCIAFGYPTPVITW-------KR 260

Query: 723 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           G   L      +I   G  L I+    +D G Y CV  +T G     T V VE  P
Sbjct: 261 GEEQLQSGGRVSIEESGQALVISAVENSDEGTYTCVASNTGGDDEFSTVVTVESAP 316



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 25/194 (12%)

Query: 798  WTDGATNGRPITHYKIIARTNW-NSTW-FNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
            W  G  N  PI +Y I   T W +  W F  +E   G  + R            L P+  
Sbjct: 843  WEPGNDNNAPIQYYIIQYDTKWADMHWQFQANETASGLAIYRKVL--------YLQPFVD 894

Query: 856  YEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            Y F+VIA NE+G  EPS+  +P  +     P + PS + G   +   + I W+ +     
Sbjct: 895  YRFRVIAVNEIGESEPSAEVAPTDDPQVAPPSKNPSGVSGSSTRPESMVIRWQAIHPFYY 954

Query: 915  NAPNIYYKIFWRKKNDTEFQSETLKEYGNVG----------IAVVRIPSEFYYTEYEVKV 964
               + +Y++ +R +  +E  ++   +  N            I   R P E    E+E  V
Sbjct: 955  GGDDFHYEVAYRPRLSSEPFTKATVDPENTDDNPTGIIQNYIVDARKPCE----EFEFSV 1010

Query: 965  QAINDVGPGPESEV 978
            +++N  GPGPE E+
Sbjct: 1011 RSMNSGGPGPEPEI 1024



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 23/217 (10%)

Query: 775  EGP-PGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
            EGP P  P  +Q+  +  + +  + W  G  N  PI +Y I   T W    +    +   
Sbjct: 1243 EGPHPDPPQNLQLRAKEQQFAMDLFWEPGNDNNAPIQYYIIQYDTKWADMHWQFQANETA 1302

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSR 891
             +V  Y  RK   ++    P+  Y F+VIA NE G  EPS+  +P  +     P   PS 
Sbjct: 1303 SDVPTY--RKVLYLQ----PFVDYRFRVIAVNEFGESEPSAEVAPTVDPEVAPPSINPSG 1356

Query: 892  IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETL----KEYGNVGI 946
            + G   +   + I W+ +     +    +Y++ +R +  +E F   T+     +    GI
Sbjct: 1357 VNGSSTRPESMVIRWQAIHPFYYSGDGFHYEVAYRPRLSSEPFTKATVYPENTDDNPTGI 1416

Query: 947  AVVRI-----PSEFYYTEYEVKVQAINDVGPGPESEV 978
                I     P E    E+E  V+++N  GPGPE E+
Sbjct: 1417 IQNYIVDASKPCE----EFEFSVRSMNSGGPGPEPEI 1449



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)

Query: 798  WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
            W  G  N  PI +Y I   T W    +    +    +V  Y  RK   ++    P+  Y 
Sbjct: 1056 WEPGNDNNAPIQYYIIQYDTKWADLHWQFQANETASDVSTY--RKVLHLQ----PFVDYR 1109

Query: 858  FKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
            F+VIA NE G  EPS+  +P  +     P   PS + G       + I W+ +       
Sbjct: 1110 FRVIAVNEFGESEPSAEVAPTVDPEVAPPSINPSGVNGNSTP-ESMVIRWQAIHPFYYGG 1168

Query: 917  PNIYYKIFWRKKNDTE-FQSETL--KEYGNVGIAVVR---IPSEFYYTEYEVKVQAINDV 970
             + +Y++ +R +  +E F  +T+  +   +    +++   + +   Y E+E  V+++N  
Sbjct: 1169 DDFHYEVAYRPRLSSEPFIKDTVYPENTDDNPTGIIQNYIVDARKPYEEFEFSVRSMNSG 1228

Query: 971  GPGPESEV 978
            GPGPE E+
Sbjct: 1229 GPGPEPEI 1236



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)

Query: 778  PGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST-W-FNVSEHVIGKE 834
            PG P  VQ+  +  + +  + W  G  N  PI +Y I   T W    W F  +E   G  
Sbjct: 1460 PGPPQNVQLRAKEQEFAMDLFWEAGNDNDAPIQYYIIQYNTKWTDMHWQFQANETSGGFA 1519

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIG 893
            + R            L P+  Y+F+VIA NE+G  +PS+  +P  +     P   PS + 
Sbjct: 1520 IYRKVL--------YLQPFVEYQFRVIAVNEIGESKPSAEVAPTVDPQVAPPSINPSGVN 1571

Query: 894  GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG-------- 945
            G       + I W+ +        + +Y++ +R +  +E  ++   +  N          
Sbjct: 1572 GSSTPESTI-IRWQAIHPFYYGGDDFHYEVAYRPRLSSEPFTKATVDPENTDDNPTGIIQ 1630

Query: 946  --IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              I     P E    E+E  V+++N  GPGPE EV
Sbjct: 1631 NYIVDASKPCE----EFEFSVRSMNSGGPGPEPEV 1661


>gi|354471626|ref|XP_003498042.1| PREDICTED: neuronal cell adhesion molecule [Cricetulus griseus]
          Length = 1258

 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 221/839 (26%), Positives = 344/839 (41%), Gaps = 98/839 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYVQDRLVANL 242
           P  + QP  +     K  I++   +I + C A G P PS+ W +     D  +D LV   
Sbjct: 35  PLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT-- 92

Query: 243 IDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
           + P S        G LIIN   + R     G Y C A N+ G+ IS ++ +       + 
Sbjct: 93  MKPGS--------GTLIINIMGEGRAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWT 144

Query: 300 LKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS- 356
            +R   I  +N G+++   C PP   P    +W  + F   + + +RV    +G LYFS 
Sbjct: 145 KERLEPITLRN-GQSLVLPCRPPVGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSN 202

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFPNNF 403
            L +    +Y C  +   + T +      LKV                + F   K     
Sbjct: 203 VLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKPSKER 262

Query: 404 PKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILT 454
           P TF  PE  ++      G  + LEC+A G P P   W +    LP N  ++ NF + L 
Sbjct: 263 PPTFLTPEGNESVKEELRGSVLSLECIAEGLPTPIIYWIKEDGTLPVNRTFYRNFKKTLQ 322

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG 514
           I  V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C A G
Sbjct: 323 ITQVSEADSGNYQCIAKNTLGAVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANG 382

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKT 573
            P     W  NG  +  E  P +D  R    D   TI + N  ER  A+YQC A N+   
Sbjct: 383 NPKPRIGWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQCNASNEYGY 436

Query: 574 RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSG 632
             ++A + VL   P        +  Y        +  C    +P P   W K     GS 
Sbjct: 437 LLANAFVNVLAEPPRILTS--ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--GSA 492

Query: 633 GRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 689
               I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+   + P   
Sbjct: 493 LHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQPEYA 551

Query: 690 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749
            +     +   C    +  L    +W  +   + N +         +ID   L +T+   
Sbjct: 552 VVQRGSKVSFECKVKHDHTLIPTIMWLKDNGELPNDE-------RFSIDKDHLVVTDVGD 604

Query: 750 ADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWT 799
            D G Y C   +T+ ++S    + V  P          P  P  +++      S  + WT
Sbjct: 605 DDGGVYTCAANTTLDRVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWT 664

Query: 800 DGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
            G  N  PIT + I           W + +E              + + +  L P+  Y 
Sbjct: 665 PGDDNNSPITKFIIEYEDAMREAGIWHHQAE----------VSGTQTTAQLKLSPYVNYS 714

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F+V+A N +G   PS  S QY T A +P Q P+ + G G +  +L I+W+PL   + N P
Sbjct: 715 FRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFESNGP 774

Query: 918 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
            + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 775 GLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 828



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 146/684 (21%), Positives = 254/684 (37%), Gaps = 106/684 (15%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSC-------NVQSKVSDTGRNGPFFPLKVFPHSNF 394
           ++  + ++   L  + + + D+GNY C        V   +S T +  P++ +        
Sbjct: 310 NRTFYRNFKKTLQITQVSEADSGNYQCIAKNTLGAVHHTISVTVKAAPYWIVA------- 362

Query: 395 QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNR 451
                    P+    +P  G+   L C A G P P   W   G P+   P +   +    
Sbjct: 363 ---------PQNLVLSP--GENGTLICRANGNPKPRIGWLTNGVPIEIAPDDPSRKIDGD 411

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD---KHMDNQADLTW 508
            +   NV+      Y C ASN+   L ++  +++ AEP   +   +   + + N+  L  
Sbjct: 412 TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTSANTLYQVIANRPAL-L 470

Query: 509 TCEAFGVPDVTYSWFR--NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
            C  FG P  T  WF+   G  L+        +D Y + DN      +  +     Y C 
Sbjct: 471 DCAFFGSPMPTIEWFKGTKGSALH--------EDIYVLHDNGTLEIPVAQKDSTGTYTCV 522

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA--GEGGNVTIFCN--PEAAPKPKFVW 622
           A+N+L    +   L +         R ++   YA    G  V+  C    +    P  +W
Sbjct: 523 ARNKLGMAKNEVHLEI-----KDPTRIIKQPEYAVVQRGSKVSFECKVKHDHTLIPTIMW 577

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH----- 677
            KD   + +  R  I +  +L+++ V  DD G+Y+C A        +   L V+      
Sbjct: 578 LKDNGELPNDERFSI-DKDHLVVTDVGDDDGGVYTCAANTTLDRVSASAVLRVVAPTPTP 636

Query: 678 GPSYYEQLPP---KITIAAHRNLQLRCSA-------------HTEELLDVAYIWTHNGVR 721
            P Y    PP   ++T    +++QL  +                E+ +  A IW H    
Sbjct: 637 APIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMREAGIWHHQAEV 696

Query: 722 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781
            G     +L+         L    N SF    E   + +S   + S +       P   P
Sbjct: 697 SGTQTTAQLK---------LSPYVNYSFRVMAE-NSIGRSVPSEASEQYLTKAAEPDQNP 746

Query: 782 GGVQVVEVHKTSATIQWT--DGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEVDRY 838
             V+ +     +  I W   +G  +  P   YK+  R  + +  W +V    +   V +Y
Sbjct: 747 TAVEGLGTEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSV----VVANVSKY 802

Query: 839 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
                 S     VP   Y  KV A N++G+  P   +   ++  D P  AP  +      
Sbjct: 803 I----VSGTPTFVP---YLIKVQALNDVGFA-PEPAAVMGHSGEDLPMVAPGNVHVNVVN 854

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIF-WR-----KKNDTEFQSETLKEYGNVGIAVVRIP 952
                + W+P+P +        Y+I+ W+     K+N    + + L   G+    +  +P
Sbjct: 855 STLAEVHWDPVPLKSVRGHLQGYRIYYWKAQGSSKRNRRHIEKKILTFQGSKTHGM--LP 912

Query: 953 SEFYYTEYEVKVQAINDVGPGPES 976
               Y+ YE+ V+ +N  G GP S
Sbjct: 913 GLQPYSHYELNVRVVNGKGEGPAS 936


>gi|134085228|emb|CAM60094.1| nadl1.1 [Danio rerio]
          Length = 1125

 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 207/824 (25%), Positives = 348/824 (42%), Gaps = 97/824 (11%)

Query: 184 DKIPRGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANL 242
           +K+ + P F  QP +   F L      +D+ L+C A G P+PS+ W K+           
Sbjct: 44  NKLKQAPEFTTQPVSHTAFSL------DDVNLACEASGDPSPSFRWVKDG---------- 87

Query: 243 IDPLSDKRF--TLSGGNLIINDPRQVED--RGSYHCKASNKFGSIISESVQLAFGFIGEF 298
                 K+F   LS    +   P       +G+Y C A+N+ G+ +S  V L    +   
Sbjct: 88  ------KQFGEVLSESGTLTPHPTMDLHFYQGTYRCYAANELGTAVSNLVHLTTEPVPSL 141

Query: 299 -----NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
                  +RA E+G       + C+PP +      +W    F + +  ++RV +S DG L
Sbjct: 142 AKVKKQKRRAYEVGE---SAVLRCNPPKSSVTPKIHWMDMQF-HHIPLNERVTISRDGNL 197

Query: 354 YFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF-----QQLKFPNNFPKTF 407
           YF+ L   D+  +Y+CN     +          + V P ++       +L  P     ++
Sbjct: 198 YFANLIANDSRDDYTCNAHYINASIILPKEPMSIYVTPSNSVVKNRRAKLHHPAGARSSY 257

Query: 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFN-RILTIPNVKVEDQGEY 466
                 G  + LEC+  G P P  +W R  S L  N   + +N R L I NV   D GEY
Sbjct: 258 --LVLRGQTLTLECIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWLQIDNVLESDDGEY 315

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           +C A N  ++++   T++++A P +T    +        +   C+A G+P    +W  NG
Sbjct: 316 VCTARNSENSVKHHYTVTVEAAPYWTRRPEEHLYAPGETVRLDCQADGIPAPNITWSING 375

Query: 527 ELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
                  +P+   D   R  +    L +  +    D A+YQC A N+  +   +  + ++
Sbjct: 376 -------VPVSGTDVDPRRRVSSGKLILSNVE-FSDTAVYQCEAVNKHGSILINTHVHIV 427

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGN 642
            L P+    P E    A  G  V + C    +P PK  W+   +I   S  +     NG+
Sbjct: 428 EL-PAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQMTNGS 486

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQL 699
           L IS VS +DS  Y+C+ +  +    ++  ++    + GP      P  + +    +  L
Sbjct: 487 LKISNVSEEDSNRYTCSVSETNKSISAELEVLNRTKIVGP------PQNLHVIRGSDAIL 540

Query: 700 RCSAHTEELLDVAYI-WTHNGVRI----GNMDLNELETPNINIDGGLLEITNASFADAGE 754
            C    +  L    + W  +G +I     N   +E+E        G L++ +    D G 
Sbjct: 541 HCKYTVDHNLKSPTVQWKKDGHKITASTSNDKYHEIE--------GSLKVLDVQMEDMGI 592

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y C V +T+   +    + V+  P  P  +++ E  + S TI W     N  P+T Y I 
Sbjct: 593 YSCEVSTTLDSDTASGYITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNSPVTEYVI- 651

Query: 815 ARTNWNSTWFNVSEHVIGKEVDRYTGRKE--ASIENVLVPWSTYEFKVIAGNELGYGEPS 872
                     N  E     +  +Y    +    +E  L P+S Y F++ A N +G   PS
Sbjct: 652 --------EMNEGETPDEGQWQKYRSVSQDIRQLEIHLQPYSKYHFQIRAVNSIGTSAPS 703

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
             S  Y+ PA KP + P  +         + ISW+ + R + N P   YK+FWR+  D+ 
Sbjct: 704 EFSLSYSIPAAKPDRNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAADSG 763

Query: 933 FQ-SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
              +E+     +V    + + +   +  +E+KVQA+ND+G  PE
Sbjct: 764 AHWTES-----SVSNPPLLVNNTGTFVSFEIKVQAVNDLGAAPE 802



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 144/612 (23%), Positives = 237/612 (38%), Gaps = 96/612 (15%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI----LTIPNVKVEDQGEYICR 469
           G+ VRL+C A G P P+  W+  G P+      +   R+    L + NV+  D   Y C 
Sbjct: 352 GETVRLDCQADGIPAPNITWSINGVPV-SGTDVDPRRRVSSGKLILSNVEFSDTAVYQCE 410

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT--WTCEAFGVPDVTYSWFRNGE 527
           A N   ++  +  + I   P   +   ++     A  T    C  FG P     W    E
Sbjct: 411 AVNKHGSILINTHVHIVELPAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHW----E 466

Query: 528 LLNSETLP-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           +L+S  +P L +     + +  L I  ++ E D   Y C      K+   SA+L VL  +
Sbjct: 467 ILDS--IPALSNAKISQMTNGSLKISNVS-EEDSNRYTCSVSETNKS--ISAELEVLN-R 520

Query: 587 PSFKKRPLESETYAGEGGNVTIFCN---PEAAPKPKFVWKKDGN-IIGSGGRRKIFE-NG 641
                 P     +   G +  + C          P   WKKDG+ I  S    K  E  G
Sbjct: 521 TKIVGPP--QNLHVIRGSDAILHCKYTVDHNLKSPTVQWKKDGHKITASTSNDKYHEIEG 578

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L +  V  +D GIYSC  +     D + G + V   P      PP+          L+ 
Sbjct: 579 SLKVLDVQMEDMGIYSCEVSTTLDSDTASGYITVQDKPD-----PPQ---------SLKL 624

Query: 702 SAHTEELLDVAY---IWTHNGVRIGNMDLNELETPN---------INIDGGLLEITNASF 749
           S   E  + +++   +  ++ V    +++NE ETP+         ++ D   LEI    +
Sbjct: 625 SEKMERSVTISWMPSVENNSPVTEYVIEMNEGETPDEGQWQKYRSVSQDIRQLEIHLQPY 684

Query: 750 ADAGEYECVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW--TDGA 802
           +    ++    +++G     + S   ++    P   P  V  +     S  I W   D  
Sbjct: 685 SKY-HFQIRAVNSIGTSAPSEFSLSYSIPAAKPDRNPENVMTLSTDPKSMIISWQEMDRR 743

Query: 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN--VLV----PWSTY 856
               P   YK+  R                +  D      E+S+ N  +LV     + ++
Sbjct: 744 QFNGPGFQYKVFWR----------------RAADSGAHWTESSVSNPPLLVNNTGTFVSF 787

Query: 857 EFKVIAGNELGYGEPSSPSPQY---NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 913
           E KV A N+LG    ++P P      +  D P +APS +     +   + + W P+  E 
Sbjct: 788 EIKVQAVNDLG----AAPEPLTVIGYSGEDFPLEAPSALSVTELQKTSVMVRWSPVRPES 843

Query: 914 QNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGI------AVVRIPSEF-YYTEYEVKVQ 965
                + YKI+ R K  +   ++      GN  +      A  +I S+  YY++Y + + 
Sbjct: 844 VRGHLLGYKIYLRMKGPSGRLRAGRSPAVGNPTVIEVPADAAEKIVSDLQYYSDYTLTIT 903

Query: 966 AINDVGPGPESE 977
           A N  G GP SE
Sbjct: 904 AFNSKGEGPHSE 915


>gi|66393077|ref|NP_571436.1| neural cell adhesion molecule L1.2 precursor [Danio rerio]
 gi|36143027|gb|AAQ85080.1| neural adhesion molecule L1.2 [Danio rerio]
          Length = 1271

 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 196/783 (25%), Positives = 346/783 (44%), Gaps = 56/783 (7%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGN----LIINDPRQ 265
           +DITL+C A G P P++ W K D V+        DP  D   ++S  +    L   D   
Sbjct: 67  DDITLTCDATGNPPPTFRWVK-DGVE-------FDPSKDPDLSVSRDSGTFSLTAKDGPI 118

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAF----GFIGEFNLKRAPEIGNQNWGKAMFCDPPT 321
            + +G Y+C ASN+ G+ +S   ++          E  + +  E G       + C+PP 
Sbjct: 119 HQYQGRYNCYASNELGTAVSNEARIVTENTPTLQTEKIITKKVEEGE---SVVLPCNPPN 175

Query: 322 NYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRN 380
                  +W  D     +++++RV    DG LYF      D+  +Y+CN+Q   +   + 
Sbjct: 176 GTVAPVIHWM-DKKLRHIQQNERVIQGRDGNLYFPHATVADSRDDYTCNIQFPSARVIKL 234

Query: 381 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP---KAGDKVRLECVAFGYPVPSYNWTRRG 437
                L V   ++  + + P     T   +     +G  + LEC+  G P PS  W R+ 
Sbjct: 235 KEPIKLTVSSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSPSIQWIRKD 294

Query: 438 SPLPRNAYFENFN-RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
             L  +   ++ N R+L   N+   D GEY C A+N +     +  ++++A P +     
Sbjct: 295 GVLSESRTTKDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAPYWIKEPK 354

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
            +       +   C+A G+P    +W  NG LL+     ++   R  ++  VLT++ +  
Sbjct: 355 SQLYAPGETVKLECKADGIPKPEVTWSINGILLSD----IDPDPRRSVKHGVLTLKNVE- 409

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNVTIFCNPEAA 615
             D A++QC+A ++  +   +A + V+ L P       +   Y+  EG    + C    +
Sbjct: 410 LSDTAVFQCKAASKHGSVLINAYVYVIELPPQILTE--DGLMYSVAEGQTTELACETFGS 467

Query: 616 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
           P+P   W+ +    + +  R     +G+L IS  S +DSG Y+CT  N      ++  L 
Sbjct: 468 PRPNVTWEGESWGALVANQRMIQLSDGSLQISNASLNDSGQYTCTVNNSKITITAE--LD 525

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETP 733
           VL+  +   + P  + I   +   L C    +   D+  + W  N  ++        ++ 
Sbjct: 526 VLNK-TVIVKPPLALRIQRGKPATLTCEYQVDSRQDLPQVQWRKNMQKLTESS----DSD 580

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 793
              ID   L I      D G Y C V +T+       ++ +   P  P  +Q+ E  +  
Sbjct: 581 KYMIDESTLIIPEVEEEDEGIYTCEVITTLDMAKASGSITIVDRPDPPSLIQMTEPKERR 640

Query: 794 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT-GRKEASIENVLVP 852
            T+ WT GA +  P+  Y I     +  T  +  E    +E+ R +   + A++   L P
Sbjct: 641 VTLSWTPGADHNSPVLEYLI----EFEETGSDRKEW---EELSRVSCSSQRATLP--LKP 691

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           + +Y F+VIA NE+G  +PS  +  Y+TPA  P   P  +     + G L I+W+ + R 
Sbjct: 692 FISYRFRVIAINEIGKSDPSMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRR 751

Query: 913 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
             N P+ +YK+ WRK   +     T K+  +    V  + +   ++ +++KVQA+N++G 
Sbjct: 752 SFNGPDFHYKVMWRKVLGSGPSWHT-KDITSPPFVVTDVGN---FSAFDIKVQAVNEMGE 807

Query: 973 GPE 975
           GPE
Sbjct: 808 GPE 810



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 151/386 (39%), Gaps = 26/386 (6%)

Query: 413 AGDKVRLECVAFGYPVPSYNWTRRGSPL-PRNAYFENFNRILTIPNVKVED------QGE 465
           + D + L C A G P P++ W + G    P      + +R     ++  +D      QG 
Sbjct: 65  SADDITLTCDATGNPPPTFRWVKDGVEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQGR 124

Query: 466 YICRASNDR-SALESSVTISIQAEPNF-TIPLTDKHMDNQADLTWTCE-AFGVPDVTYSW 522
           Y C ASN+  +A+ +   I  +  P   T  +  K ++    +   C    G       W
Sbjct: 125 YNCYASNELGTAVSNEARIVTENTPTLQTEKIITKKVEEGESVVLPCNPPNGTVAPVIHW 184

Query: 523 FRNGELL----NSETLPLEDQDRYFIQDNVLTIR--YLNPERDPAMYQCRAKNQLKTRYS 576
             + +L     N   +   D + YF    V   R  Y    + P+    + K  +K   S
Sbjct: 185 M-DKKLRHIQQNERVIQGRDGNLYFPHATVADSRDDYTCNIQFPSARVIKLKEPIKLTVS 243

Query: 577 SAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR 635
           S+   V   +P   +    S +Y    G N+ + C  +  P P   W +   ++      
Sbjct: 244 SSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSPSIQWIRKDGVLSESRTT 303

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           K   +  L    +S  D G Y CTATN  GM     R+ V   P Y+ + P     A   
Sbjct: 304 KDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAP-YWIKEPKSQLYAPGE 362

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
            ++L C A      +V   W+ NG+ + ++D +    P  ++  G+L + N   +D   +
Sbjct: 363 TVKLECKADGIPKPEVT--WSINGILLSDIDPD----PRRSVKHGVLTLKNVELSDTAVF 416

Query: 756 ECVVKSTVGKISTKTTV-IVEGPPGL 780
           +C   S  G +     V ++E PP +
Sbjct: 417 QCKAASKHGSVLINAYVYVIELPPQI 442


>gi|338723807|ref|XP_003364802.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Equus
           caballus]
          Length = 1192

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 234/868 (26%), Positives = 361/868 (41%), Gaps = 104/868 (11%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
           G  PL LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +  
Sbjct: 15  GRAPLILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-- 62

Query: 208 ILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN-- 261
              +I + C A G P PS+ W +     D  +D LV   + P S        G L IN  
Sbjct: 63  ---NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIM 109

Query: 262 -DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CD 318
            + +     G Y C A N+ G+ IS ++ +       +  ++   I  +N G+A+   C 
Sbjct: 110 SEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQALVLPCS 168

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDT 377
           PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T
Sbjct: 169 PPIGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQT 227

Query: 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVP 429
            +      +KV        +K     P TF  PE   +      G+ + LEC+A G P P
Sbjct: 228 IQQKQPISVKVI------SVKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTP 281

Query: 430 SYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
              W +    LP N  ++ NF + L I  V   D G Y C A N   A+  +++++++A 
Sbjct: 282 IIYWIKEDGTLPINRTFYRNFKKTLQILQVSEADSGNYQCIAKNALGAIHHTISVTVKAA 341

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P + +   +  +    D T  C A G P    SW  NG  +  E  P +D  R    D  
Sbjct: 342 PYWIMAPQNLVLSPGEDGTLICRANGKPKPRISWLSNGVPI--EIAP-DDPSRKIDGD-- 396

Query: 549 LTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            TI + N  ER  A+YQC A N+     ++A + VL   P        +  Y        
Sbjct: 397 -TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPA 453

Query: 608 IF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNV 663
           +  C    +P P   W K     GS  R  I+   ENG L I    +D +G Y+C A N 
Sbjct: 454 LLDCAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNK 511

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            GM +++  L +   P+   + P    +     +   C    +  L     W  +   + 
Sbjct: 512 LGMAKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELP 570

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP------ 777
           N            +D   L +T+ S  D G Y CV  +T+  +S    + V  P      
Sbjct: 571 NDG-------RFTVDKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVAPTPTPAP 623

Query: 778 ----PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVI 831
               P  P  +++ +    S  + WT G  N  PIT + I      +    W + +E   
Sbjct: 624 IYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE--- 680

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
                      + + +  L P+  Y F+V+A N LG   PS  S QY T A +P + P+ 
Sbjct: 681 -------VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTA 733

Query: 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVR 950
           + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V 
Sbjct: 734 VEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVS 790

Query: 951 IPSEFYYTEYEVKVQAINDVGPGPESEV 978
               F    Y +KVQA+NDVG  PE  V
Sbjct: 791 GTPTF--VPYLIKVQALNDVGFAPEPAV 816


>gi|440894049|gb|ELR46614.1| Neural cell adhesion molecule L1 [Bos grunniens mutus]
          Length = 1257

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 203/822 (24%), Positives = 353/822 (42%), Gaps = 82/822 (9%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDYV-----QDRLVANL 242
           + + +P  +     +R ++   +D++L C A G P   + W ++  +     +  ++ N 
Sbjct: 29  HHVMEPPIITEQSPRRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQ 88

Query: 243 IDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
           + P S   F+++G +       Q    G+Y C ASNK G+ +S  +QL      ++  + 
Sbjct: 89  V-PHSGS-FSITGNSSNFAQSFQ----GTYRCFASNKLGTAMSHEIQLMAEGTPKWPKET 142

Query: 303 APEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQ 360
              +  +     +  C PP +   +  YW      + +++D+RV +  +G LYF+  L  
Sbjct: 143 VKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTS 201

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDK 416
            +  +Y C+     + T        L+V   ++       L FP N           G  
Sbjct: 202 DNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHL--VALQGQP 259

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           + LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   
Sbjct: 260 LILECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLG 319

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETL 534
           +   +  ++++A P + +     H+    +     C+  G P    +W  NG       +
Sbjct: 320 SDRHAYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------I 371

Query: 535 PLED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
           P+E+     +Y I    L +  L P  D  + QC A+N+     ++A + V+ L P+   
Sbjct: 372 PVEELGKDQKYRIHHGALVLSNLQPS-DTMVTQCEARNRHGLLLANAYIYVVEL-PAKIL 429

Query: 592 RPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVS 649
            P ++ETY A +G    + C    AP P   W  ++G  +    R   + NG L I  + 
Sbjct: 430 TP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQ 488

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
            +D+G Y C A N    D+S   ++    +   +   Q P          +   C A  +
Sbjct: 489 TNDTGHYFCQAAN----DQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFD 544

Query: 707 ELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 765
             L  +  W     R   +DL EL ++    I+   L I +  ++D G Y CV  + +  
Sbjct: 545 PSLQHSTTW-----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDV 599

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IAR 816
           + ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I      +A 
Sbjct: 600 VESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAP 659

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             W S         +GK         + S    L P+  Y F+V A N+ G GEPS  S 
Sbjct: 660 EKWYS---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSE 705

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 936
              TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +   E Q  
Sbjct: 706 TVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQ---EMQGA 762

Query: 937 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             ++  +    VV   S F    YE+KVQ +N  G GPE ++
Sbjct: 763 WQEQIVSDPFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQI 802


>gi|338723803|ref|XP_003364800.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Equus
           caballus]
          Length = 1180

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 234/868 (26%), Positives = 361/868 (41%), Gaps = 104/868 (11%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
           G  PL LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +  
Sbjct: 15  GRAPLILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-- 62

Query: 208 ILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN-- 261
              +I + C A G P PS+ W +     D  +D LV   + P S        G L IN  
Sbjct: 63  ---NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIM 109

Query: 262 -DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CD 318
            + +     G Y C A N+ G+ IS ++ +       +  ++   I  +N G+A+   C 
Sbjct: 110 SEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQALVLPCS 168

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDT 377
           PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T
Sbjct: 169 PPIGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQT 227

Query: 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVP 429
            +      +KV        +K     P TF  PE   +      G+ + LEC+A G P P
Sbjct: 228 IQQKQPISVKVI------SVKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTP 281

Query: 430 SYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
              W +    LP N  ++ NF + L I  V   D G Y C A N   A+  +++++++A 
Sbjct: 282 IIYWIKEDGTLPINRTFYRNFKKTLQILQVSEADSGNYQCIAKNALGAIHHTISVTVKAA 341

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P + +   +  +    D T  C A G P    SW  NG  +  E  P +D  R    D  
Sbjct: 342 PYWIMAPQNLVLSPGEDGTLICRANGKPKPRISWLSNGVPI--EIAP-DDPSRKIDGD-- 396

Query: 549 LTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
            TI + N  ER  A+YQC A N+     ++A + VL   P        +  Y        
Sbjct: 397 -TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPA 453

Query: 608 IF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNV 663
           +  C    +P P   W K     GS  R  I+   ENG L I    +D +G Y+C A N 
Sbjct: 454 LLDCAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNK 511

Query: 664 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723
            GM +++  L +   P+   + P    +     +   C    +  L     W  +   + 
Sbjct: 512 LGMAKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELP 570

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP------ 777
           N            +D   L +T+ S  D G Y CV  +T+  +S    + V  P      
Sbjct: 571 NDG-------RFTVDKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVAPTPTPAP 623

Query: 778 ----PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVI 831
               P  P  +++ +    S  + WT G  N  PIT + I      +    W + +E   
Sbjct: 624 IYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE--- 680

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
                      + + +  L P+  Y F+V+A N LG   PS  S QY T A +P + P+ 
Sbjct: 681 -------VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTA 733

Query: 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVR 950
           + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V 
Sbjct: 734 VEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVS 790

Query: 951 IPSEFYYTEYEVKVQAINDVGPGPESEV 978
               F    Y +KVQA+NDVG  PE  V
Sbjct: 791 GTPTF--VPYLIKVQALNDVGFAPEPAV 816


>gi|156396450|ref|XP_001637406.1| predicted protein [Nematostella vectensis]
 gi|156224518|gb|EDO45343.1| predicted protein [Nematostella vectensis]
          Length = 1349

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 214/820 (26%), Positives = 347/820 (42%), Gaps = 91/820 (11%)

Query: 213 TLSCYAGGYPNPSYEWFKEDYVQDRLVANL---IDPLSDKRFTLSGGNLIINDPRQVEDR 269
           TL C A G    +  W K+     +L+A L    + ++DK+  +S   L +  PR  +D 
Sbjct: 103 TLECRASGKTPITMYWEKDG----KLLAELEFKYEIITDKQKGVS--KLKVQIPRPSQDN 156

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ--NWGKAMFCDPP---TNYP 324
           G++ C A N  G + S  +++   +IG+F  +    +  +    G+      P   T YP
Sbjct: 157 GNFQCFAENAEGKVFSRKIRVVVTYIGKFTNQDENYVEEKQVTVGQPFMLKCPERNTKYP 216

Query: 325 --GVNYYWA-RDYFPN---FVEEDKRVFVSYDGALYF-----SALEQIDA-------GNY 366
             G +YYW  +D   N    + +   + ++ +G L F     + L+ ID        G  
Sbjct: 217 QFGASYYWGNKDSTTNTINLLPQSSNIAMTQNGNLVFLYVTEADLKTIDDWGRGAKNGTI 276

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY 426
            CNVQ+  +    +          +S  + +   +  PKT   A +   K  L CVA   
Sbjct: 277 QCNVQAGTTTYTSHKFLLKQVGTDNSPLKPVFVQDGEPKTLESAIQGKSKA-LFCVAQMS 335

Query: 427 PVP--SYNWTRRGS----PLP----RNAYF---ENFNRILTIPNV-KVEDQGEYICRASN 472
           P P  +  W R  S     LP    +N +    +   R L I  V K + +G Y C   N
Sbjct: 336 PAPNNAIRWVRVDSVTNDKLPIVDGKNGFSIPEDKSGRNLIISQVSKEQHEGVYQCIVEN 395

Query: 473 DRSALESSVT-ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG-ELL 529
           ++   ES ++ + +   P + + P    ++         CEAFG P   Y W+ NG +++
Sbjct: 396 NQGKTESQLSQLKVFVPPGWIVKPPPKMNIPMYGGAVLLCEAFGDPTPAYGWYVNGSKIV 455

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
           NS+ L         + +N LT + +       +YQC A+N      S+  + +   KP  
Sbjct: 456 NSQHL--------IVTNNKLTFKAVELYEHAGIYQCVAENDYGMVVSTTVVEIDARKPGI 507

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
                    Y  +     I C+  AAP    VW KD  ++   GR  +    +L+I+PV 
Sbjct: 508 IGF---GPFYIFKDTKGEIKCDSNAAPAANHVWSKDDQVLSISGRYSLGPGNSLVITPVQ 564

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-EL 708
           ++D G Y+C ATN+ G D       V        +    + +   +    RC A  +  L
Sbjct: 565 QNDEGKYTCKATNLLGTDTKSNDATVYERTKITVRPDASVELIKGKPTDFRCQATADPRL 624

Query: 709 LDV-AYIWTHNGVRIGNMDLNELE-TPNIN-IDGGL-LEITNASFADAGEYECVV----K 760
           +++  Y W  +G         EL+ T NIN I   L L+++ A   D   Y CV     K
Sbjct: 625 MNILKYKWLKDGT--------ELQYTENINWIPNQLRLKLSEADIDDGAVYTCVAYTDDK 676

Query: 761 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
               +    +   V+G P  P  + +   +  +  I W  G++ G+PITHY+I   +   
Sbjct: 677 LKYSEDRASSIANVQGVPFPPSNLTITNCYNLTTVITWVPGSSTGKPITHYQIEQESE-- 734

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP--QY 878
              F      I K+VD     K  S++  L PW+   F++ A N +G    S P+P    
Sbjct: 735 ---FEAGVWQILKKVD---DPKSTSLQLQLTPWAKLRFRMRAVNSVGPSRASLPTPVGAC 788

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 938
            T   +P   P    G  GK  +L  +W PL + +QNAP   Y + +RK    ++Q  T+
Sbjct: 789 ETKVSRPTMVPKNFRGVPGKANELDAAWTPLTKLEQNAPGCKYVLKYRKSGAKDWQKVTI 848

Query: 939 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               N   A   I +  YY  +E  + A ND+G GP+S++
Sbjct: 849 D---NPSTAKYSILNPGYYELWEFMIYATNDIGDGPQSDI 885


>gi|46369975|gb|AAS89823.1| neuronal cell adhesion molecule long isoform Nc6 [Rattus
           norvegicus]
          Length = 1206

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 225/878 (25%), Positives = 358/878 (40%), Gaps = 111/878 (12%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQ-PTDVVFDLSKR 206
           G  PL LF+C+  I  L   L          D +  D + + P   +Q P D + D  + 
Sbjct: 10  GRAPLFLFLCQM-ISALDVPL----------DPKLLDDLVQPPTITQQSPKDYIIDPRE- 57

Query: 207 SILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN- 261
               +I + C A G P PS+ W +     D  +D LV   + P S        G L+IN 
Sbjct: 58  ----NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLVINI 103

Query: 262 --DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCD 318
             + +     G Y C A N+ G+ +S ++ +       +  +R  P I        + C 
Sbjct: 104 MSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCR 163

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDT 377
           PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T
Sbjct: 164 PPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQT 222

Query: 378 GRNGPFFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDK 416
            +      LKV                + F   K     P TF  PE  ++      G+ 
Sbjct: 223 IQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNV 282

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           + LEC+A G P P   W +    LP N  ++ NF + L I +V   D G Y C A N   
Sbjct: 283 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKTLQIIHVSEADSGNYQCIAKNALG 342

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           A+  +++++++A P + +   +  +    + T  C A G P    SW  NG  +    + 
Sbjct: 343 AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE---IA 399

Query: 536 LEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
           L+D  R    D   TI + N  E   A+YQC A N+     ++A + VL   P       
Sbjct: 400 LDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTS-- 454

Query: 595 ESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSR 650
            +  Y        +  C    +P P   W K     GS     I+   +NG L I    +
Sbjct: 455 ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQK 512

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           D +G Y+C A N  GM +++  L +   P+ + + P    +     +   C    +  L 
Sbjct: 513 DSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLI 571

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
              +W  +   + N +         ++D   L +++    D G Y C   +T+  +S   
Sbjct: 572 PTILWLKDNGELPNDE-------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASA 624

Query: 771 TVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
            + V  P          P  P  +++      S  + WT G  N  PIT + I      +
Sbjct: 625 VLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMH 684

Query: 821 ST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878
               W + +E              + + +  L P+  Y F+V+A N +G   PS  S QY
Sbjct: 685 EAGLWRHQAE----------VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQY 734

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSET 937
            T A +P Q P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  
Sbjct: 735 LTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVV 794

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 795 V---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 827


>gi|28972161|dbj|BAC65534.1| mKIAA0343 protein [Mus musculus]
          Length = 1202

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 218/831 (26%), Positives = 344/831 (41%), Gaps = 92/831 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYVQDRLVANL 242
           P  + QP  +     K  I++   +I + C A G P PS+ W +     D  +D LV   
Sbjct: 49  PLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT-- 106

Query: 243 IDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
           + P S        G L+IN   + +     G Y C A N+ G+ +S ++ +       + 
Sbjct: 107 MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 158

Query: 300 LKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS- 356
            +R   I  QN G+++   C PP   P    +W  + F   + + +RV    +G LYFS 
Sbjct: 159 KERLEPIVLQN-GQSLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSN 216

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFPNNF 403
            L +    +Y C  +   + T +      LKV                + F   K     
Sbjct: 217 VLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKER 276

Query: 404 PKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILT 454
           P TF  PE  ++      G+ + LEC+A G P P   W +    LP N  ++ NF + L 
Sbjct: 277 PPTFLTPEGNESHKEELRGNVLSLECIAEGLPTPIIYWIKEDGMLPANRTFYRNFKKTLQ 336

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG 514
           I +V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C A G
Sbjct: 337 ITHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANG 396

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKT 573
            P    SW  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+   
Sbjct: 397 NPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQCNASNKYGY 450

Query: 574 RYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIG 630
             ++A + VL   P    R L S    Y        +  C    +P P   W K     G
Sbjct: 451 LLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--G 504

Query: 631 SGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 687
           S     I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+   + P 
Sbjct: 505 SALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQPE 563

Query: 688 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 747
              +     +   C    +  L    +W  +   + N +         + D   L +++ 
Sbjct: 564 YAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDKDHLVVSDV 616

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 807
              D G Y C   +T+   S    + V   P  P  +++      S  + WT G  N  P
Sbjct: 617 KDDDGGTYTCTANTTLDSASASAVLRVVDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSP 676

Query: 808 ITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
           IT + I      +    W + +E              + + +  L P+  Y F+V+A N 
Sbjct: 677 ITKFIIEYEDAMHDAGLWRHQAE----------VSGTQTTAQLKLSPYVNYSFRVMAENS 726

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
           +G   PS  S QY T A +P Q P  + G G +  +L I+W+PL   + N P + YK+ W
Sbjct: 727 IGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSW 786

Query: 926 RKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           R+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 787 RQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 832


>gi|46369971|gb|AAS89821.1| neuronal cell adhesion molecule long isoform Nc14 [Rattus
           norvegicus]
          Length = 1197

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 228/880 (25%), Positives = 360/880 (40%), Gaps = 115/880 (13%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQ-PTDVVFDLSKR 206
           G  PL LF+C+  I  L   L          D +  D + + P   +Q P D + D  + 
Sbjct: 10  GRAPLFLFLCQM-ISALDVPL----------DPKLLDDLVQPPTITQQSPKDYIIDPRE- 57

Query: 207 SILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN- 261
               +I + C A G P PS+ W +     D  +D LV   + P S        G L+IN 
Sbjct: 58  ----NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLVINI 103

Query: 262 --DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCD 318
             + +     G Y C A N+ G+ +S ++ +       +  +R  P I        + C 
Sbjct: 104 MSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCR 163

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDT 377
           PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T
Sbjct: 164 PPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQT 222

Query: 378 GRNGPFFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDK 416
            +      LKV                + F   K     P TF  PE  ++      G+ 
Sbjct: 223 IQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNV 282

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           + LEC+A G P P   W +    LP N  ++ NF + L I +V   D G Y C A N   
Sbjct: 283 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKTLQIIHVSEADSGNYQCIAKNALG 342

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           A+  +++++++A P + +   +  +    + T  C A G P    SW  NG  +    + 
Sbjct: 343 AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE---IA 399

Query: 536 LEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
           L+D  R    D   TI + N  E   A+YQC A N+     ++A + VL   P    R L
Sbjct: 400 LDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPP----RIL 452

Query: 595 ESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPV 648
            S    Y        +  C    +P P   W K     GS     I+   +NG L I   
Sbjct: 453 TSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVA 510

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
            +D +G Y+C A N  GM +++  L +   P+ + + P    +     +   C    +  
Sbjct: 511 QKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHT 569

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           L    +W  +   + N +         ++D   L +++    D G Y C   +T+  +S 
Sbjct: 570 LIPTILWLKDNGELPNDE-------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA 622

Query: 769 KTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN 818
              + V  P          P  P  +++      S  + WT G  N  PIT + I     
Sbjct: 623 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDA 682

Query: 819 WNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
            +    W + +E              + + +  L P+  Y F+V+A N +G   PS  S 
Sbjct: 683 MHEAGLWRHQAE----------VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASE 732

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQS 935
           QY T A +P Q P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S
Sbjct: 733 QYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS 792

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
             +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 793 VVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 827


>gi|46369973|gb|AAS89822.1| neuronal cell adhesion molecule long isoform Nc3 [Rattus
           norvegicus]
          Length = 1198

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 228/880 (25%), Positives = 360/880 (40%), Gaps = 115/880 (13%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQ-PTDVVFDLSKR 206
           G  PL LF+C+  I  L   L          D +  D + + P   +Q P D + D  + 
Sbjct: 10  GRAPLFLFLCQM-ISALDVPL----------DPKLLDDLVQPPTITQQSPKDYIIDPRE- 57

Query: 207 SILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN- 261
               +I + C A G P PS+ W +     D  +D LV   + P S        G L+IN 
Sbjct: 58  ----NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLVINI 103

Query: 262 --DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCD 318
             + +     G Y C A N+ G+ +S ++ +       +  +R  P I        + C 
Sbjct: 104 MSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPCR 163

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDT 377
           PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T
Sbjct: 164 PPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQT 222

Query: 378 GRNGPFFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDK 416
            +      LKV                + F   K     P TF  PE  ++      G+ 
Sbjct: 223 IQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNV 282

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           + LEC+A G P P   W +    LP N  ++ NF + L I +V   D G Y C A N   
Sbjct: 283 LSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKTLQIIHVSEADSGNYQCIAKNALG 342

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           A+  +++++++A P + +   +  +    + T  C A G P    SW  NG  +    + 
Sbjct: 343 AVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE---IA 399

Query: 536 LEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
           L+D  R    D   TI + N  E   A+YQC A N+     ++A + VL   P    R L
Sbjct: 400 LDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPP----RIL 452

Query: 595 ESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPV 648
            S    Y        +  C    +P P   W K     GS     I+   +NG L I   
Sbjct: 453 TSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVA 510

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
            +D +G Y+C A N  GM +++  L +   P+ + + P    +     +   C    +  
Sbjct: 511 QKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHT 569

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
           L    +W  +   + N +         ++D   L +++    D G Y C   +T+  +S 
Sbjct: 570 LIPTILWLKDNGELPNDE-------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSA 622

Query: 769 KTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN 818
              + V  P          P  P  +++      S  + WT G  N  PIT + I     
Sbjct: 623 SAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDA 682

Query: 819 WNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
            +    W + +E              + + +  L P+  Y F+V+A N +G   PS  S 
Sbjct: 683 MHEAGLWRHQAE----------VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASE 732

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQS 935
           QY T A +P Q P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S
Sbjct: 733 QYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTS 792

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
             +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 793 VVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 827


>gi|149051179|gb|EDM03352.1| rCG62174, isoform CRA_a [Rattus norvegicus]
          Length = 1205

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 217/840 (25%), Positives = 345/840 (41%), Gaps = 100/840 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYVQDRLVANL 242
           P  + QP  +     K  I++   +I + C A G P PS+ W +     D  +D LV   
Sbjct: 33  PLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT-- 90

Query: 243 IDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
           + P S        G L+IN   + +     G Y C A N+ G+ +S ++ +       + 
Sbjct: 91  MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 300 LKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-A 357
            +R  P I        + C PP   P    +W  + F   + + +RV    +G LYFS  
Sbjct: 143 KERLEPIILRSGQSLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNV 201

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFPNNFP 404
           L +    +Y C  +   + T +      LKV                + F   K     P
Sbjct: 202 LPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERP 261

Query: 405 KTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTI 455
            TF  PE  ++      G+ + LEC+A G P P   W +    LP N  ++ NF + L I
Sbjct: 262 PTFLTPEGNESHKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKTLQI 321

Query: 456 PNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV 515
            +V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C A G 
Sbjct: 322 IHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGN 381

Query: 516 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTR 574
           P    SW  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+    
Sbjct: 382 PKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNKYGYL 435

Query: 575 YSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGS 631
            ++A + VL   P    R L S    Y        +  C    +P P   W K     GS
Sbjct: 436 LANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--GS 489

Query: 632 GGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
                I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+ + + P  
Sbjct: 490 ALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIKQPEY 548

Query: 689 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 748
             +     +   C    +  L    +W  +   + N +         ++D   L +++  
Sbjct: 549 AVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDKDHLVVSDVK 601

Query: 749 FADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQW 798
             D G Y C   +T+  +S    + V  P          P  P  +++      S  + W
Sbjct: 602 DEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTW 661

Query: 799 TDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
           T G  N  PIT + I      +    W + +E              + + +  L P+  Y
Sbjct: 662 TPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQLKLSPYVNY 711

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
            F+V+A N +G   PS  S QY T A +P Q P+ + G G +  +L I+W+PL   + N 
Sbjct: 712 SFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNG 771

Query: 917 PNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 772 PGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 826


>gi|225637535|ref|NP_001139503.1| neuronal cell adhesion molecule isoform 2 precursor [Mus musculus]
          Length = 1186

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 218/831 (26%), Positives = 344/831 (41%), Gaps = 92/831 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYVQDRLVANL 242
           P  + QP  +     K  I++   +I + C A G P PS+ W +     D  +D LV   
Sbjct: 33  PLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT-- 90

Query: 243 IDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
           + P S        G L+IN   + +     G Y C A N+ G+ +S ++ +       + 
Sbjct: 91  MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 300 LKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS- 356
            +R   I  QN G+++   C PP   P    +W  + F   + + +RV    +G LYFS 
Sbjct: 143 KERLEPIVLQN-GQSLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSN 200

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFPNNF 403
            L +    +Y C  +   + T +      LKV                + F   K     
Sbjct: 201 VLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKER 260

Query: 404 PKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILT 454
           P TF  PE  ++      G+ + LEC+A G P P   W +    LP N  ++ NF + L 
Sbjct: 261 PPTFLTPEGNESHKEELRGNVLSLECIAEGLPTPIIYWIKEDGMLPANRTFYRNFKKTLQ 320

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG 514
           I +V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C A G
Sbjct: 321 ITHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANG 380

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKT 573
            P    SW  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+   
Sbjct: 381 NPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQCNASNKYGY 434

Query: 574 RYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIG 630
             ++A + VL   P    R L S    Y        +  C    +P P   W K     G
Sbjct: 435 LLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--G 488

Query: 631 SGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 687
           S     I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+   + P 
Sbjct: 489 SALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQPE 547

Query: 688 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 747
              +     +   C    +  L    +W  +   + N +         + D   L +++ 
Sbjct: 548 YAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDKDHLVVSDV 600

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 807
              D G Y C   +T+   S    + V   P  P  +++      S  + WT G  N  P
Sbjct: 601 KDDDGGTYTCTANTTLDSASASAVLRVVDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSP 660

Query: 808 ITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
           IT + I      +    W + +E              + + +  L P+  Y F+V+A N 
Sbjct: 661 ITKFIIEYEDAMHDAGLWRHQAE----------VSGTQTTAQLKLSPYVNYSFRVMAENS 710

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
           +G   PS  S QY T A +P Q P  + G G +  +L I+W+PL   + N P + YK+ W
Sbjct: 711 IGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSW 770

Query: 926 RKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           R+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 771 RQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 816


>gi|46369977|gb|AAS89824.1| neuronal cell adhesion molecule long isoform Nc7 [Rattus
           norvegicus]
          Length = 1194

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 215/842 (25%), Positives = 345/842 (40%), Gaps = 99/842 (11%)

Query: 184 DKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYVQDRL 238
           D + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  +D L
Sbjct: 35  DDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPL 89

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
           V   + P S        G L+IN   + +     G Y C A N+ G+ +S ++ +     
Sbjct: 90  VT--MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRS 139

Query: 296 GEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
             +  +R  P I        + C PP   P    +W  + F   + + +RV    +G LY
Sbjct: 140 PLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLY 198

Query: 355 FS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFP 400
           FS  L +    +Y C  +   + T +      LKV                + F   K  
Sbjct: 199 FSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSS 258

Query: 401 NNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNR 451
              P TF  PE  ++      G+ + LEC+A G P P   W +    LP N  ++ NF +
Sbjct: 259 KERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK 318

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE 511
            L I +V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C 
Sbjct: 319 TLQIIHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICR 378

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQ 570
           A G P    SW  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+
Sbjct: 379 ANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNK 432

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNII 629
                ++A + VL   P        +  Y        +  C    +P P   W K     
Sbjct: 433 YGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK-- 488

Query: 630 GSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
           GS     I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+ + + P
Sbjct: 489 GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIKQP 547

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
               +     +   C    +  L    +W  +   + N +         ++D   L +++
Sbjct: 548 EYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDKDHLVVSD 600

Query: 747 ASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATI 796
               D G Y C   +T+  +S    + V  P          P  P  +++      S  +
Sbjct: 601 VKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQL 660

Query: 797 QWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
            WT G  N  PIT + I      +    W + +E              + + +  L P+ 
Sbjct: 661 TWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQLKLSPYV 710

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            Y F+V+A N +G   PS  S QY T A +P Q P+ + G G +  +L I+W+PL   + 
Sbjct: 711 NYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQS 770

Query: 915 NAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  
Sbjct: 771 NGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFA 825

Query: 974 PE 975
           PE
Sbjct: 826 PE 827


>gi|317418903|emb|CBN80941.1| Neurofascin, partial [Dicentrarchus labrax]
          Length = 1241

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 183/662 (27%), Positives = 290/662 (43%), Gaps = 54/662 (8%)

Query: 339 VEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL 397
           + +DKRV +  +G LYFS +   DA  +YSCN +   + T +    F L+V     +   
Sbjct: 111 IPQDKRVSMGLNGDLYFSNVLAKDAHTDYSCNARFPFTHTIQQKNPFTLRVQTKELYNDT 170

Query: 398 KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP-RNAYFENFNRILTIP 456
            +    P      P     + +       P P+  W ++G  LP R   FEN+N+ L I 
Sbjct: 171 SYNATDPYGGESLPVGTAPLPVHFF-LTSPTPTVKWFKKGGDLPARKVKFENYNKTLKII 229

Query: 457 NVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP 516
           NV  ED GEY+C A+N   ++  S+ + ++A P +    T+  +    +    C A G P
Sbjct: 230 NVSEEDAGEYVCMANNHLGSIRHSIFVQVKAAPYWLDKPTNLVLAPDENGRLVCRANGNP 289

Query: 517 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576
                W  NG+ + S      +  R  + D ++  R +      A+YQC A NQ     +
Sbjct: 290 KPNIQWLINGQPVESSP---PNPSRQELGDTII-FRSVQ-MGSSAVYQCNASNQHGYLLA 344

Query: 577 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRR 635
           +A + VL + P     P        E     + C    +P P+  W K+G   G  GG+ 
Sbjct: 345 NAFVSVLDMPPRMLG-PKNQLIKVIENNRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQY 403

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           +++ NG L I     +D G Y+C A ++ G  E++ RL V   P+   + P   +     
Sbjct: 404 RVYINGTLEIKRARAEDEGTYTCLANSILGSAENQVRLEVKE-PTRIVRAPEHQSAIRGS 462

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
             +  C   ++  L +   WT +   + NM         +  D   L I N +  D G Y
Sbjct: 463 TARFNCKVKSDPTLPITVTWTKDDKPL-NMGWR------LRKDEESLTIPNVNEGDEGTY 515

Query: 756 ECVVKSTVGK--ISTKTTVIVEGP--PGLPGGVQ-----------VVEVHKTSATIQWTD 800
            C VKS + +   S + TV+ E    P +   +            + +    S  + W  
Sbjct: 516 SCTVKSEIDQDSASARLTVLEEASLNPSVSSALPPDRPDPPIDLDLSDPAARSIRLTWIP 575

Query: 801 GATNGRPITHYKIIARTN-WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
           G  +  P+T + +    N W    W N+S          Y G   + I   L P+  Y+F
Sbjct: 576 GNDHRSPVTQFLVQFEENRWEPGRWQNLST---------YPGDLNSVILQ-LAPFVNYQF 625

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           +VIA N +G  +PS PS +Y T    P   P  + G G K  ++ ISWEPL   ++N PN
Sbjct: 626 RVIAINSVGQSKPSRPSLRYKTSGAAPDAIPKGLRGWGSKKDNMEISWEPLLDLERNGPN 685

Query: 919 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPES 976
           + Y ++WR+K       E  +E+ NV     +  + +   Y  YE+K+QA+N+ GPGPES
Sbjct: 686 LRYNVWWRRK-------ELEEEWNNVTTMESKYVVQNTETYVPYEIKIQAMNEFGPGPES 738

Query: 977 EV 978
            V
Sbjct: 739 NV 740


>gi|81158224|ref|NP_005001.3| neuronal cell adhesion molecule isoform B precursor [Homo sapiens]
          Length = 1183

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 220/839 (26%), Positives = 351/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ +S ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +   P++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 VKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            + + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 819



 Score = 39.7 bits (91), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958


>gi|46369969|gb|AAS89820.1| neuronal cell adhesion molecule long isoform Nc1 [Rattus
           norvegicus]
          Length = 1209

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 215/842 (25%), Positives = 345/842 (40%), Gaps = 99/842 (11%)

Query: 184 DKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYVQDRL 238
           D + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  +D L
Sbjct: 35  DDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPL 89

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
           V   + P S        G L+IN   + +     G Y C A N+ G+ +S ++ +     
Sbjct: 90  VT--MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRS 139

Query: 296 GEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
             +  +R  P I        + C PP   P    +W  + F   + + +RV    +G LY
Sbjct: 140 PLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLY 198

Query: 355 FS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFP 400
           FS  L +    +Y C  +   + T +      LKV                + F   K  
Sbjct: 199 FSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSS 258

Query: 401 NNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNR 451
              P TF  PE  ++      G+ + LEC+A G P P   W +    LP N  ++ NF +
Sbjct: 259 KERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK 318

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE 511
            L I +V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C 
Sbjct: 319 TLQIIHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICR 378

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQ 570
           A G P    SW  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+
Sbjct: 379 ANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNK 432

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNII 629
                ++A + VL   P        +  Y        +  C    +P P   W K     
Sbjct: 433 YGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK-- 488

Query: 630 GSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
           GS     I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+ + + P
Sbjct: 489 GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIKQP 547

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746
               +     +   C    +  L    +W  +   + N +         ++D   L +++
Sbjct: 548 EYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDKDHLVVSD 600

Query: 747 ASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATI 796
               D G Y C   +T+  +S    + V  P          P  P  +++      S  +
Sbjct: 601 VKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQL 660

Query: 797 QWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
            WT G  N  PIT + I      +    W + +E              + + +  L P+ 
Sbjct: 661 TWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQLKLSPYV 710

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            Y F+V+A N +G   PS  S QY T A +P Q P+ + G G +  +L I+W+PL   + 
Sbjct: 711 NYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQS 770

Query: 915 NAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  
Sbjct: 771 NGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFA 825

Query: 974 PE 975
           PE
Sbjct: 826 PE 827


>gi|31874098|emb|CAD97960.1| hypothetical protein [Homo sapiens]
          Length = 1183

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 220/839 (26%), Positives = 351/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ +S ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +   P++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 VKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            + + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 819


>gi|410254538|gb|JAA15236.1| neuronal cell adhesion molecule [Pan troglodytes]
          Length = 1183

 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 220/839 (26%), Positives = 351/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ +S ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +   P++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 VKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            + + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 819



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958


>gi|296471083|tpg|DAA13198.1| TPA: L1 cell adhesion molecule isoform 3 [Bos taurus]
          Length = 1248

 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 203/816 (24%), Positives = 352/816 (43%), Gaps = 85/816 (10%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDYV-----QDRLVANLIDPLSDK 249
           ++ + S R ++    +D++L C A G P   + W ++  +     +  ++ N + P S  
Sbjct: 31  IITEQSPRRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQV-PHSGS 89

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
            F+++G +       Q    G+Y C ASNK G+ +S  +QL      ++  +    +  +
Sbjct: 90  -FSITGNSSNFAQSFQ----GTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVE 144

Query: 310 NWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYS 367
                +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y 
Sbjct: 145 EGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYI 203

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDKVRLECVA 423
           C+     + T        L+V   ++       L FP N           G  + LEC+A
Sbjct: 204 CHAHFPGTRTIIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHL--VALQGQPLILECIA 261

Query: 424 FGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
            G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +   +  
Sbjct: 262 EGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYY 321

Query: 483 ISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED--- 538
           ++++A P + +     H+    +     C+  G P    +W  NG       +P+E+   
Sbjct: 322 VTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELGK 373

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
             +Y I    L +  L P  D  + QC A+N+     ++A + V+ L P+    P ++ET
Sbjct: 374 DQKYRIHHGALVLSNLQPS-DTMVTQCEARNRHGLLLANAYIYVVEL-PAKILTP-DNET 430

Query: 599 Y-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 656
           Y A +G    + C    AP P   W  ++G  +    R   + NG L I  +  +D+G Y
Sbjct: 431 YMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTNDTGHY 490

Query: 657 SCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
            C A N    D+S   ++    +   +   Q P          +   C A  +  L  + 
Sbjct: 491 FCQAAN----DQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHST 546

Query: 714 IWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
            W     R   +DL EL ++    I+   L I +  ++D G Y CV  + +  + ++  +
Sbjct: 547 TW-----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAEL 601

Query: 773 IVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTW 823
           +V G PG    +++ + H   ++   + W+    +  PI  Y I      +A   W S  
Sbjct: 602 LVVGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS-- 659

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
                  +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP  
Sbjct: 660 -------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEA 707

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYG 942
            P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +K    +Q + + +  
Sbjct: 708 APEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSD-- 765

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                VV   S F    YE+KVQ +N  G GPE ++
Sbjct: 766 --PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQI 797


>gi|38372401|sp|P97686.2|NRCAM_RAT RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
           AltName: Full=Ankyrin-binding cell adhesion molecule
           NrCAM; AltName: Full=Neuronal surface protein Bravo;
           Short=rBravo; AltName: Full=NgCAM-related cell adhesion
           molecule; Short=Ng-CAM-related; Flags: Precursor
          Length = 1214

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 218/844 (25%), Positives = 347/844 (41%), Gaps = 103/844 (12%)

Query: 184 DKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYVQDRL 238
           D + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  +D L
Sbjct: 40  DDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPL 94

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
           V   + P S        G L+IN   + +     G Y C A N+ G+ +S ++ +     
Sbjct: 95  VT--MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRS 144

Query: 296 GEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
             +  +R  P I        + C PP   P    +W  + F   + + +RV    +G LY
Sbjct: 145 PLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLY 203

Query: 355 FS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFP 400
           FS  L +    +Y C  +   + T +      LKV                + F   K  
Sbjct: 204 FSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSS 263

Query: 401 NNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNR 451
              P TF  PE  ++      G+ + LEC+A G P P   W +    LP N  ++ NF +
Sbjct: 264 KERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK 323

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE 511
            L I +V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C 
Sbjct: 324 TLQIIHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICR 383

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQ 570
           A G P    SW  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+
Sbjct: 384 ANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNK 437

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGN 627
                ++A + VL   P    R L S    Y        +  C    +P P   W K   
Sbjct: 438 YGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK 493

Query: 628 IIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
             GS     I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+ + +
Sbjct: 494 --GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIK 550

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 744
            P    +     +   C    +  L    +W  +   + N +         ++D   L +
Sbjct: 551 QPGYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDKDHLVV 603

Query: 745 TNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSA 794
           ++    D G Y C   +T+  +S    + V  P          P  P  +++      S 
Sbjct: 604 SDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSV 663

Query: 795 TIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
            + WT G  N  PIT + I      +    W + +E              + + +  L P
Sbjct: 664 QLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQLKLSP 713

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           +  Y F+V+A N +G   PS  S QY T A +P Q P+ + G G +  +L I+W+PL   
Sbjct: 714 YVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGF 773

Query: 913 KQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           + N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG
Sbjct: 774 QSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVG 828

Query: 972 PGPE 975
             PE
Sbjct: 829 FAPE 832


>gi|296471082|tpg|DAA13197.1| TPA: L1 cell adhesion molecule isoform 2 [Bos taurus]
          Length = 1253

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 203/823 (24%), Positives = 354/823 (43%), Gaps = 84/823 (10%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDYV-----QDRLVANL 242
           + + +P  +     +R ++   +D++L C A G P   + W ++  +     +  ++ N 
Sbjct: 29  HHVMEPPIITEQSPRRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQ 88

Query: 243 IDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
           + P S   F+++G +       Q    G+Y C ASNK G+ +S  +QL      ++  + 
Sbjct: 89  V-PHSGS-FSITGNSSNFAQSFQ----GTYRCFASNKLGTAMSHEIQLMAEGTPKWPKET 142

Query: 303 APEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQ 360
              +  +     +  C PP +   +  YW      + +++D+RV +  +G LYF+  L  
Sbjct: 143 VKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTS 201

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDK 416
            +  +Y C+     + T        L+V   ++       L FP N           G  
Sbjct: 202 DNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHL--VALQGQP 259

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           + LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   
Sbjct: 260 LILECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLG 319

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETL 534
           +   +  ++++A P + +     H+    +     C+  G P    +W  NG       +
Sbjct: 320 SDRHAYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------I 371

Query: 535 PLED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
           P+E+     +Y I    L +  L P  D  + QC A+N+     ++A + V+ L P+   
Sbjct: 372 PVEELGKDQKYRIHHGALVLSNLQPS-DTMVTQCEARNRHGLLLANAYIYVVEL-PAKIL 429

Query: 592 RPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVS 649
            P ++ETY A +G    + C    AP P   W  ++G  +    R   + NG L I  + 
Sbjct: 430 TP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQ 488

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
            +D+G Y C A N    D+S   ++    +   +   Q P          +   C A  +
Sbjct: 489 TNDTGHYFCQAAN----DQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFD 544

Query: 707 ELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 765
             L  +  W     R   +DL EL ++    I+   L I +  ++D G Y CV  + +  
Sbjct: 545 PSLQHSTTW-----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDV 599

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IAR 816
           + ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I      +A 
Sbjct: 600 VESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAP 659

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             W S         +GK         + S    L P+  Y F+V A N+ G GEPS  S 
Sbjct: 660 EKWYS---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSE 705

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQS 935
              TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +K    +Q 
Sbjct: 706 TVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQE 765

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + + +       VV   S F    YE+KVQ +N  G GPE ++
Sbjct: 766 QIVSD----PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQI 802


>gi|1842431|gb|AAB47755.1| ankyrin binding cell adhesion molecule NrCAM [Rattus norvegicus]
          Length = 1215

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 218/844 (25%), Positives = 347/844 (41%), Gaps = 103/844 (12%)

Query: 184 DKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYVQDRL 238
           D + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  +D L
Sbjct: 41  DDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPL 95

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI 295
           V   + P S        G L+IN   + +     G Y C A N+ G+ +S ++ +     
Sbjct: 96  VT--MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRS 145

Query: 296 GEFNLKR-APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALY 354
             +  +R  P I        + C PP   P    +W  + F   + + +RV    +G LY
Sbjct: 146 PLWTKERLEPIILRSGQSLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLY 204

Query: 355 FS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFP 400
           FS  L +    +Y C  +   + T +      LKV                + F   K  
Sbjct: 205 FSNVLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSS 264

Query: 401 NNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNR 451
              P TF  PE  ++      G+ + LEC+A G P P   W +    LP N  ++ NF +
Sbjct: 265 KERPPTFLTPEGNESHKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK 324

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE 511
            L I +V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C 
Sbjct: 325 TLQIIHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICR 384

Query: 512 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQ 570
           A G P    SW  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+
Sbjct: 385 ANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNK 438

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGN 627
                ++A + VL   P    R L S    Y        +  C    +P P   W K   
Sbjct: 439 YGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK 494

Query: 628 IIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
             GS     I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+ + +
Sbjct: 495 --GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIK 551

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 744
            P    +     +   C    +  L    +W  +   + N +         ++D   L +
Sbjct: 552 QPGYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDKDHLVV 604

Query: 745 TNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSA 794
           ++    D G Y C   +T+  +S    + V  P          P  P  +++      S 
Sbjct: 605 SDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSV 664

Query: 795 TIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
            + WT G  N  PIT + I      +    W + +E              + + +  L P
Sbjct: 665 QLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQLKLSP 714

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           +  Y F+V+A N +G   PS  S QY T A +P Q P+ + G G +  +L I+W+PL   
Sbjct: 715 YVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGF 774

Query: 913 KQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           + N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG
Sbjct: 775 QSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVG 829

Query: 972 PGPE 975
             PE
Sbjct: 830 FAPE 833


>gi|300794021|ref|NP_001179364.1| neural cell adhesion molecule L1 precursor [Bos taurus]
 gi|296471081|tpg|DAA13196.1| TPA: L1 cell adhesion molecule isoform 1 [Bos taurus]
          Length = 1257

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 203/823 (24%), Positives = 354/823 (43%), Gaps = 84/823 (10%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDYV-----QDRLVANL 242
           + + +P  +     +R ++   +D++L C A G P   + W ++  +     +  ++ N 
Sbjct: 29  HHVMEPPIITEQSPRRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQ 88

Query: 243 IDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR 302
           + P S   F+++G +       Q    G+Y C ASNK G+ +S  +QL      ++  + 
Sbjct: 89  V-PHSGS-FSITGNSSNFAQSFQ----GTYRCFASNKLGTAMSHEIQLMAEGTPKWPKET 142

Query: 303 APEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQ 360
              +  +     +  C PP +   +  YW      + +++D+RV +  +G LYF+  L  
Sbjct: 143 VKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTS 201

Query: 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDK 416
            +  +Y C+     + T        L+V   ++       L FP N           G  
Sbjct: 202 DNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHL--VALQGQP 259

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           + LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   
Sbjct: 260 LILECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLG 319

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETL 534
           +   +  ++++A P + +     H+    +     C+  G P    +W  NG       +
Sbjct: 320 SDRHAYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------I 371

Query: 535 PLED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
           P+E+     +Y I    L +  L P  D  + QC A+N+     ++A + V+ L P+   
Sbjct: 372 PVEELGKDQKYRIHHGALVLSNLQPS-DTMVTQCEARNRHGLLLANAYIYVVEL-PAKIL 429

Query: 592 RPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVS 649
            P ++ETY A +G    + C    AP P   W  ++G  +    R   + NG L I  + 
Sbjct: 430 TP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQ 488

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
            +D+G Y C A N    D+S   ++    +   +   Q P          +   C A  +
Sbjct: 489 TNDTGHYFCQAAN----DQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFD 544

Query: 707 ELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 765
             L  +  W     R   +DL EL ++    I+   L I +  ++D G Y CV  + +  
Sbjct: 545 PSLQHSTTW-----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDV 599

Query: 766 ISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IAR 816
           + ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I      +A 
Sbjct: 600 VESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAP 659

Query: 817 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876
             W S         +GK         + S    L P+  Y F+V A N+ G GEPS  S 
Sbjct: 660 EKWYS---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSE 705

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQS 935
              TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +K    +Q 
Sbjct: 706 TVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQE 765

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + + +       VV   S F    YE+KVQ +N  G GPE ++
Sbjct: 766 QIVSD----PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQI 802


>gi|402864553|ref|XP_003896524.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Papio anubis]
          Length = 1180

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 229/862 (26%), Positives = 360/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L I + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+NDVG  PE  V
Sbjct: 796 -VPYLIKVQALNDVGFAPEPAV 816



 Score = 40.0 bits (92), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A ++W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|296209983|ref|XP_002751798.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Callithrix
           jacchus]
          Length = 1183

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 223/839 (26%), Positives = 349/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDALVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  QN G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP N   +
Sbjct: 253 GAKSNRERPPTFLTPEGNASNKEELRGNVLLLECIAEGLPTPLIYWAKEDGILPTNRTSY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P + +   +  +    D 
Sbjct: 313 KNFKKTLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIMAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVITNRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM ++   L +   P++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPTWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 IKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKD-----NEELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            + + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
            A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 TAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 819



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 781 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG VQV  V+ T A + W      +  G  +  Y+I      NS   N     I K++  
Sbjct: 833 PGNVQVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 889

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
           + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS +     
Sbjct: 890 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLKIVNP 947

Query: 898 KIGDLSISWEP 908
            +  L++ W+P
Sbjct: 948 TLDSLTLEWDP 958


>gi|160877705|pdb|2OM5|A Chain A, N-Terminal Fragment Of Human Tax1
          Length = 381

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/406 (35%), Positives = 197/406 (48%), Gaps = 41/406 (10%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F  QP  V+F   + S    + L+C A   P  +Y W K +  + +L     +P S 
Sbjct: 3   GPVFEDQPLSVLF--PEESTEEQVLLACRARASPPATYRW-KMNGTEMKL-----EPGS- 53

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R  L GGNL+I +P + +D G Y C ASN  G+++S    L FGF+ EF+ + R P   
Sbjct: 54  -RHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKA 112

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
           ++ WG  + C+PP +YPG++Y W  + FPNF+  D R FVS   G LY +     D GNY
Sbjct: 113 HEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNY 172

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + F  + KA          G +
Sbjct: 173 SCLATSHMD-------FSTKSVF--SKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQ 223

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +    L  +  +      L IP+V  ED+G Y C A N +  
Sbjct: 224 VTLECFAFGNPVPRIKWRKVDGSL--SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGR 281

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I +QA+P +   ++D   D  ++L W C A G P  T  W RNGE       PL
Sbjct: 282 DTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGE-------PL 334

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
             Q+R  +    L    L+ E D  MYQC A+N+  T Y+SA+L V
Sbjct: 335 ASQNRVEVLAGDLRFSKLSLE-DSGMYQCVAENKHGTIYASAELAV 379



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 152/395 (38%), Gaps = 53/395 (13%)

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNVKVEDQ 463
           FPE     ++V L C A   P  +Y W   G+ +   P + +      ++ +   K +D 
Sbjct: 15  FPEE-STEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDA 73

Query: 464 GEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV-------- 515
           G Y C ASN        V   +  E         +    + D     E +GV        
Sbjct: 74  GVYQCLASN-------PVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPA 126

Query: 516 --PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL 571
             P ++Y W     LLN     +    R+F+      L I   N   D   Y C A + +
Sbjct: 127 HYPGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHM 180

Query: 572 ----KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
               K+ +S  AQL +         PS K R   +ETYA  G  VT+ C     P P+  
Sbjct: 181 DFSTKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIK 239

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           W+K   + GS   +       L I  VS +D G Y C A N  G D  +GR+IV   P +
Sbjct: 240 WRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEW 296

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 741
            + +          NL+  C+A  +    V   W  NG  + + +        + +  G 
Sbjct: 297 LKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGD 346

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
           L  +  S  D+G Y+CV ++  G I     + V+ 
Sbjct: 347 LRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 381


>gi|47058952|ref|NP_037282.1| neuronal cell adhesion molecule precursor [Rattus norvegicus]
 gi|46369979|gb|AAS89825.1| neuronal cell adhesion molecule long isoform Nc17 [Rattus
           norvegicus]
          Length = 1299

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 228/881 (25%), Positives = 360/881 (40%), Gaps = 115/881 (13%)

Query: 148 TGMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQ-PTDVVFDLSK 205
            G  PL LF+C+  I  L   L          D +  D + + P   +Q P D + D  +
Sbjct: 9   AGRAPLFLFLCQM-ISALDVPL----------DPKLLDDLVQPPTITQQSPKDYIIDPRE 57

Query: 206 RSILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN 261
                +I + C A G P PS+ W +     D  +D LV   + P S        G L+IN
Sbjct: 58  -----NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLVIN 102

Query: 262 ---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFC 317
              + +     G Y C A N+ G+ +S ++ +       +  +R  P I        + C
Sbjct: 103 IMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEPIILRSGQSLVLPC 162

Query: 318 DPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSD 376
            PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + 
Sbjct: 163 RPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQ 221

Query: 377 TGRNGPFFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GD 415
           T +      LKV                + F   K     P TF  PE  ++      G+
Sbjct: 222 TIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGN 281

Query: 416 KVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDR 474
            + LEC+A G P P   W +    LP N  ++ NF + L I +V   D G Y C A N  
Sbjct: 282 VLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKTLQIIHVSEADSGNYQCIAKNAL 341

Query: 475 SALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
            A+  +++++++A P + +   +  +    + T  C A G P    SW  NG  +    +
Sbjct: 342 GAVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRISWLTNGVPVE---I 398

Query: 535 PLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
            L+D  R    D   TI + N  E   A+YQC A N+     ++A + VL   P    R 
Sbjct: 399 ALDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPP----RI 451

Query: 594 LESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISP 647
           L S    Y        +  C    +P P   W K     GS     I+   +NG L I  
Sbjct: 452 LTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPV 509

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
             +D +G Y+C A N  GM +++  L +   P+ + + P    +     +   C    + 
Sbjct: 510 AQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDH 568

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
            L    +W  +   + N +         ++D   L +++    D G Y C   +T+  +S
Sbjct: 569 TLIPTILWLKDNGELPNDE-------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS 621

Query: 768 TKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 817
               + V  P          P  P  +++      S  + WT G  N  PIT + I    
Sbjct: 622 ASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYED 681

Query: 818 NWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
             +    W + +E              + + +  L P+  Y F+V+A N +G   PS  S
Sbjct: 682 AMHEAGLWRHQAE----------VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEAS 731

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQ 934
            QY T A +P Q P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ 
Sbjct: 732 EQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWT 791

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           S  +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 792 SVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 827


>gi|332237968|ref|XP_003268176.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Nomascus
           leucogenys]
          Length = 1183

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 220/839 (26%), Positives = 351/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ +S ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIVHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +   P++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 VKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPSDE--RFTVDRDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            + + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VVADVSDEDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 MAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 819



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958


>gi|297681291|ref|XP_002818391.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Pongo abelii]
          Length = 1183

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 221/839 (26%), Positives = 350/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ +S ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIIHVSEADSGNYQCVAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N      ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNDYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +   P++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 VKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            + + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 MAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 819



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958


>gi|402864557|ref|XP_003896526.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Papio anubis]
          Length = 1192

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 229/862 (26%), Positives = 360/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L I + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+NDVG  PE  V
Sbjct: 796 -VPYLIKVQALNDVGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A ++W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|410918979|ref|XP_003972962.1| PREDICTED: neuronal cell adhesion molecule-like [Takifugu rubripes]
          Length = 1211

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 226/865 (26%), Positives = 353/865 (40%), Gaps = 92/865 (10%)

Query: 160 SIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYF-IKQPTDVVFDLSKRSILNDITLSCYA 218
           S+  L  L +     +  +D +  + +P+ P   ++ P D +FD  +     +I + C A
Sbjct: 12  SVVLLTLLSHLASALEVPLDPKVLEGLPQPPTITLQSPKDYIFDPRE-----NIVIHCEA 66

Query: 219 GGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED--RGSY 272
            G P+PS+ W +     D  +D  V  L+ P S        G L+I+   +  +   G+Y
Sbjct: 67  KGKPHPSFSWTRNGTHFDVEKDSKV--LMKPGS--------GTLVIDISGEKAEAYEGTY 116

Query: 273 HCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWA 331
            C A N  G+ +S  + +       ++ +R   +  Q     +  C PP   P    +W 
Sbjct: 117 QCTAHNDHGTALSNKIVIRQSRSPLWSKERNEAVVVQKGVSLVLQCRPPAGLPPPVIFWM 176

Query: 332 RDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390
            + F + +  DKRV  + +G LYFS  L +    +Y C  +   + T +      L V  
Sbjct: 177 DNNF-HRLPLDKRVSQALNGDLYFSNVLPEDSRPDYICYARFPHTQTIQQKQPISLNVLD 235

Query: 391 HSNFQQ----LKFPNNFPKTFPEAPKA-----------------GDKVRLECVAFGYPVP 429
                +    L    +F +  PE                     G+ + LEC+A G P P
Sbjct: 236 METVNETVAALYNITDFSRDNPEGDHQPGFMYPMGSTSTKMVLRGETLELECIAEGLPTP 295

Query: 430 SYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
             +W + G  LP     F+ F + L I +V   D G+Y C A+N   +    + ++++A 
Sbjct: 296 DISWQKDGGELPSGRVSFQTFQKTLKISDVVEADAGDYRCTATNRLGSTHHIIKVTVKAA 355

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P +     +  +         C   G P    +WF NG  ++ E  P ED  R    D V
Sbjct: 356 PFWISAPRNLILAPNETGVLMCRVGGEPKPKITWFVNG--VSIENAP-EDLRRKVDGDTV 412

Query: 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
            T+  +      A+YQC A N+     ++A + VL   P     P  +  Y     N  +
Sbjct: 413 -TLSSVQ-SGSSAVYQCNASNEFGYLMANAFVNVLAEAPRILTPP--NRVYQVITNNPAL 468

Query: 609 F-CNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
             C    +P P   W KD    I  G    I ENG L I      +SG Y+C ATN  G+
Sbjct: 469 LHCASFGSPIPVITWFKDIQTSIKDGDPYVIHENGTLEIHVAQPLNSGKYTCIATNNLGI 528

Query: 667 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 726
            E+   L V   P+   + P    +         C+   +  L     W  +    G + 
Sbjct: 529 KENHVFLEVKE-PTRILKQPEYKVVQRGMRAAFECTVKHDPTLIPTMTWLKDS---GELP 584

Query: 727 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS----------TKTTVIVEG 776
            +E       +D   L I + +  D G Y CV+ +T+   S          T T  IV  
Sbjct: 585 DDE----RFVVDADTLTIMDVTDRDKGTYTCVMNTTLDHDSASAVLTVVEATPTPAIVYE 640

Query: 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR--TNWNSTWFNVSEHVIGKE 834
            P  P  +++ +  +    + W  G  +  P   + I      +    W N++E      
Sbjct: 641 RPDPPTDLEMTDQTERGVRLTWIPGDEHNSPTQKFLIQYEDLLHQPGVWTNLTE------ 694

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
           VD  +     +++  L P   Y F+V+A N LGY +PS PS QY T    P + P+ + G
Sbjct: 695 VDGTS----TTVQLSLSPHVYYSFRVLAMNRLGYSKPSQPSNQYRTNPAAPDENPADVKG 750

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPS 953
            G   G+L ISW PL   + N P + Y++ WR+ N     S   K   NV   VV   P+
Sbjct: 751 IGTGPGNLVISWTPLTGFQSNGPGLEYRVQWRQLNAGGDWS--TKNVANVSQFVVSGTPT 808

Query: 954 EFYYTEYEVKVQAINDVGPGPESEV 978
              Y  YE++VQAIND G GPE E 
Sbjct: 809 ---YVSYEIRVQAINDYGSGPEPET 830



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 142/685 (20%), Positives = 244/685 (35%), Gaps = 113/685 (16%)

Query: 346 FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPK 405
           F ++   L  S + + DAG+Y C   +++  T        +KV      +   F  + P+
Sbjct: 313 FQTFQKTLKISDVVEADAGDYRCTATNRLGST-----HHIIKV----TVKAAPFWISAPR 363

Query: 406 TFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNVKVED 462
               AP   +   L C   G P P   W   G  +   P +   +     +T+ +V+   
Sbjct: 364 NLILAPN--ETGVLMCRVGGEPKPKITWFVNGVSIENAPEDLRRKVDGDTVTLSSVQSGS 421

Query: 463 QGEYICRASNDRSALESSVTISIQAE-PNFTIPLTDKHM---DNQADLTWTCEAFGVPDV 518
              Y C ASN+   L ++  +++ AE P    P    +    +N A L   C +FG P  
Sbjct: 422 SAVYQCNASNEFGYLMANAFVNVLAEAPRILTPPNRVYQVITNNPALLH--CASFGSPIP 479

Query: 519 TYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
             +WF++ +        ++D D Y I +N  L I    P  +   Y C A N L  + + 
Sbjct: 480 VITWFKDIQT------SIKDGDPYVIHENGTLEIHVAQP-LNSGKYTCIATNNLGIKENH 532

Query: 578 AQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKDGNIIG 630
             L V     +  +P +K            G      C  +  P   P   W KD   + 
Sbjct: 533 VFLEVKEPTRILKQPEYK--------VVQRGMRAAFECTVKHDPTLIPTMTWLKDSGEL- 583

Query: 631 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG-PS---YYEQLP 686
               R + +   L I  V+  D G Y+C        D +   L V+   P+    YE+  
Sbjct: 584 PDDERFVVDADTLTIMDVTDRDKGTYTCVMNTTLDHDSASAVLTVVEATPTPAIVYERPD 643

Query: 687 P----KITIAAHRNLQL-------------RCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           P    ++T    R ++L             +     E+LL    +WT+     G     +
Sbjct: 644 PPTDLEMTDQTERGVRLTWIPGDEHNSPTQKFLIQYEDLLHQPGVWTNLTEVDGTSTTVQ 703

Query: 730 LE-TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 788
           L  +P++     +L +    ++   +     ++               P   P  V+ + 
Sbjct: 704 LSLSPHVYYSFRVLAMNRLGYSKPSQPSNQYRTNPA-----------APDENPADVKGIG 752

Query: 789 VHKTSATIQWT--DGATNGRPITHYKIIART-NWNSTW-----FNVSEHVIGKEVDRYTG 840
               +  I WT   G  +  P   Y++  R  N    W      NVS+ V+         
Sbjct: 753 TGPGNLVISWTPLTGFQSNGPGLEYRVQWRQLNAGGDWSTKNVANVSQFVVSGTPT---- 808

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY---NTPADKPYQAPSRIGGGGG 897
                       + +YE +V A N+ G G    P P+     +  D P  AP  +     
Sbjct: 809 ------------YVSYEIRVQAINDYGSG----PEPETVIGYSGEDLPLSAPKGVQVKVP 852

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV-----GIAVVRIP 952
                 + WEP+PR         YK+++R++          +    V       +  R+P
Sbjct: 853 NSTFAEVHWEPVPRSSVRGKLQGYKVYYRRQRGLHETEPEEEPQEQVLTFSGNRSEGRLP 912

Query: 953 SEFYYTEYEVKVQAINDVGPGPESE 977
               Y+ Y + ++  N+ G GP S+
Sbjct: 913 GLQPYSVYNLSIRVFNNKGEGPPSQ 937


>gi|403257022|ref|XP_003921137.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Saimiri
           boliviensis boliviensis]
          Length = 1192

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 226/862 (26%), Positives = 359/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  QN G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV    + ++       P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVISAKSNRER------PPTFLTPEGNASSKEELRGNVLLLECIAEGLPTPLIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P + +
Sbjct: 287 KEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIM 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
              L +   P++  + P    +     +   C    +  L +  +W  +   + N +   
Sbjct: 518 DVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE--- 573

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
                  +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 574 ----RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+NDVG  PE  V
Sbjct: 796 -VPYLIKVQALNDVGFAPEPAV 816


>gi|403257018|ref|XP_003921135.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Saimiri
           boliviensis boliviensis]
 gi|56122260|gb|AAV74281.1| neuronal cell adhesion protein [Saimiri boliviensis]
          Length = 1180

 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 226/862 (26%), Positives = 359/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  QN G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV    + ++       P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVISAKSNRER------PPTFLTPEGNASSKEELRGNVLLLECIAEGLPTPLIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P + +
Sbjct: 287 KEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIM 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
              L +   P++  + P    +     +   C    +  L +  +W  +   + N +   
Sbjct: 518 DVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE--- 573

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
                  +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 574 ----RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+NDVG  PE  V
Sbjct: 796 -VPYLIKVQALNDVGFAPEPAV 816


>gi|387539342|gb|AFJ70298.1| neuronal cell adhesion molecule isoform E precursor [Macaca
           mulatta]
          Length = 1192

 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 229/862 (26%), Positives = 360/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L I + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+NDVG  PE  V
Sbjct: 796 -VPYLIKVQALNDVGFAPEPAV 816


>gi|296236723|ref|XP_002807966.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like [Callithrix jacchus]
          Length = 1248

 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 204/813 (25%), Positives = 339/813 (41%), Gaps = 79/813 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      +D L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +      ++
Sbjct: 269 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEITWRING-------IPVEELAMDP 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
            Y IQ   L +       D  + QC A N+     ++A + V+ L    K    +++TY 
Sbjct: 381 NYRIQRGALILNNXQ-TSDTMVTQCEAGNRNGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A  G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D++   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 498 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 553

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             +G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDMVESRAQLLV 608

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 609 VGSPGSVPRLALSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V 
Sbjct: 715 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQV 802


>gi|410952026|ref|XP_003982690.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Felis catus]
          Length = 1184

 Score =  213 bits (541), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 226/843 (26%), Positives = 352/843 (41%), Gaps = 97/843 (11%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV   + P S        G L IN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT--MKPGS--------GTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN--YYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  +N G+++               +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLRN-GQSLVLPCRPPLGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP--------HSNFQQLKF- 399
           +G LYFS  L +    +Y C  +   + T +      +KV           +N    +F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 400 ---PN-NFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
              PN   P TF  PE   +      G+ + LEC+A G P P   W +    LP N  ++
Sbjct: 253 SAKPNRERPPTFLTPEGNTSNKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPTNRTFY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
            NF + L I  V   D G Y C A N   A+  +++++++A P + +   +  +    D 
Sbjct: 313 RNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKAAPYWILAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           +  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 SLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 622
            A N+     ++A + VL   P    R L S    Y        +  C    +P P   W
Sbjct: 427 NASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTIEW 482

Query: 623 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679
            K     GS  R  I+   ENG L I    +D +G Y+C A N  GM +++  L +   P
Sbjct: 483 FKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 539

Query: 680 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INID 738
           +   + P    +     +   C    +  L +   W          D  EL +     +D
Sbjct: 540 TRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------DNGELPSDGRFTVD 591

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798
              LE+ +   +D G Y CV  +T+  +S    + V   P  P  +++ +    S  + W
Sbjct: 592 KDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSW 651

Query: 799 TDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
           T G  N  PIT + I      +    W + +E              + + +  L P+  Y
Sbjct: 652 TPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQTTAQLKLSPYVNY 701

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
            F+V+A N LG   PS PS QY T A +P   P+ + G G +  +L I+W+PL   + N 
Sbjct: 702 SFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNG 761

Query: 917 PNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 762 PGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 816

Query: 976 SEV 978
             V
Sbjct: 817 PAV 819


>gi|338723809|ref|XP_001491938.3| PREDICTED: neuronal cell adhesion molecule isoform 1 [Equus
           caballus]
          Length = 1211

 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 235/881 (26%), Positives = 363/881 (41%), Gaps = 111/881 (12%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
           G  PL LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +  
Sbjct: 15  GRAPLILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-- 62

Query: 208 ILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN-- 261
              +I + C A G P PS+ W +     D  +D LV   + P S        G L IN  
Sbjct: 63  ---NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIM 109

Query: 262 -DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CD 318
            + +     G Y C A N+ G+ IS ++ +       +  ++   I  +N G+A+   C 
Sbjct: 110 SEGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQALVLPCS 168

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDT 377
           PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T
Sbjct: 169 PPIGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQT 227

Query: 378 GRNGPFFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDK 416
            +      +KV                + F  +K     P TF  PE   +      G+ 
Sbjct: 228 IQQKQPISVKVISVDELNDTIAANLSDTEFYGVKSSRERPPTFLTPEGNASNKEELRGNV 287

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           + LEC+A G P P   W +    LP N  ++ NF + L I  V   D G Y C A N   
Sbjct: 288 LSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKTLQILQVSEADSGNYQCIAKNALG 347

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           A+  +++++++A P + +   +  +    D T  C A G P    SW  NG  +  E  P
Sbjct: 348 AIHHTISVTVKAAPYWIMAPQNLVLSPGEDGTLICRANGKPKPRISWLSNGVPI--EIAP 405

Query: 536 LEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
            +D  R    D   TI + N  ER  A+YQC A N+     ++A + VL   P       
Sbjct: 406 -DDPSRKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS-- 459

Query: 595 ESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSR 650
            +  Y        +  C    +P P   W K     GS  R  I+   ENG L I    +
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQK 517

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           D +G Y+C A N  GM +++  L +   P+   + P    +     +   C    +  L 
Sbjct: 518 DSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLT 576

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
               W  +   + N            +D   L +T+ S  D G Y CV  +T+  +S   
Sbjct: 577 PTVTWLKDNGELPNDG-------RFTVDKDHLVVTDVSDDDGGTYTCVANTTLDTVSASA 629

Query: 771 TVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
            + V  P          P  P  +++ +    S  + WT G  N  PIT + I      +
Sbjct: 630 VLRVVAPTPTPAPIYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMH 689

Query: 821 ST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878
               W + +E              + + +  L P+  Y F+V+A N LG   PS  S QY
Sbjct: 690 EAGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQY 739

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSET 937
            T A +P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  
Sbjct: 740 LTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVL 799

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +    NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 800 V---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835


>gi|302191651|ref|NP_001180513.1| neuronal cell adhesion molecule isoform F precursor [Homo sapiens]
          Length = 1180

 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 226/862 (26%), Positives = 360/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 796 -VPYLIKVQALNDMGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|77681487|ref|NP_001029334.1| neuronal cell adhesion molecule precursor [Pan troglodytes]
 gi|56122350|gb|AAV74326.1| neuronal cell adhesion protein [Pan troglodytes]
          Length = 1180

 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 226/862 (26%), Positives = 360/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 796 -VPYLIKVQALNDMGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|405960111|gb|EKC26058.1| Neuroglian [Crassostrea gigas]
          Length = 1279

 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 200/791 (25%), Positives = 333/791 (42%), Gaps = 77/791 (9%)

Query: 214 LSCYAGG-YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPR-QVEDRGS 271
           L C A G  P   Y+W K+  + D     +  P +  R     G   +N  R Q  D G+
Sbjct: 61  LQCVASGNTPQLRYDWLKDGKLIDFTSNEVKYPNNTLRIYKEQGLGTLNIHRVQESDYGT 120

Query: 272 YHCKAS----NKFGSIISESVQLAFGFIGEF------NLKRAPEIGNQNWGKAMFCDPPT 321
           Y C+AS    +     +S+ V+L    I  F      + K+ P    Q     + CDPP 
Sbjct: 121 YQCRASSDREDSQAVSLSKKVELIEAIISPFQDSSDVDSKKVP----QGQYLMLTCDPPF 176

Query: 322 NYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN--YSCNVQSKVSDTGR 379
           + P     W  D     ++ ++R+ + Y+G L+F+ +   D G+  YSC           
Sbjct: 177 SNPKATLSWTLDDTLREMDFNERIVMDYEGNLHFANVASEDGGDKMYSCFAALHFIGFYT 236

Query: 380 NGPFFPLKVF-PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS 438
            G    LKV+   + FQ  K      K        G+ V+  C+  GYP P+ +W R G 
Sbjct: 237 KGRTTELKVYGDKAAFQPAKIRWTSEKKV--VGVEGESVKFMCIFSGYPTPTISWRRVGR 294

Query: 439 PLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA--LESSVTISIQAEPNFTIPLT 496
               ++ +E     L I  VK  D+GEY+C  +N  +    E    + +QA+P +  P  
Sbjct: 295 ASEESSGYE-----LVISAVKPSDKGEYVCSGTNSVTGNPQEVKFMVDVQAKPTWVSPPL 349

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556
           D  +      T  C A G P  T  W+ +G+   +  +P     + +IQ+NV+ I  LN 
Sbjct: 350 DTRVSVGESGTVNCTAVGNPTPTVEWYIDGKPFKA--IP----GKRYIQNNVIHIDNLN- 402

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 616
           +++  + QC A N   + +S   + VL L P         +  AG   +  + C     P
Sbjct: 403 KKESTVVQCNATNSHGSLFSDVYINVLALPPEITNWTKSLKVAAGR--SAVLSCEHNGYP 460

Query: 617 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV- 675
            P   W +   ++   G R  F   ++ I  VS++D G++ C + N  G ++ +  LIV 
Sbjct: 461 TPTLEWMRGPQLLN--GDRYNFTQTSITILNVSKNDEGVFICISKNNQGREQKENMLIVR 518

Query: 676 -------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
                  L G +  E+    I + +  +++  C A T+    V Y+W  NG  I      
Sbjct: 519 DKTSIKDLTGITETEEGKTSIEVDSDEDVKFTCIAMTDPREMVRYVWKKNGKVI-----K 573

Query: 729 ELETPNINIDGG--LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
           +   P++  + G  +L +  A    +G Y CV  + + +      + V+  P  P  V++
Sbjct: 574 DFGDPHVRCEEGCSVLRVQEADATQSGNYTCVANNGIDEDQRTIELRVKAAPDRPDDVKL 633

Query: 787 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWN----STWFNVSEHVIGKEVDRYTGRK 842
                    +QW+ G  N  PI +Y I   T+++    +T +  S        D  T   
Sbjct: 634 TSCGDWKLGLQWSAGFHNYMPIINYTIEYSTSFDWDKWTTLYQTS--------DSNTKVS 685

Query: 843 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG-GKIGD 901
           + S+   ++    Y+F++ A N+ GY EPS P+    T   +P + P+ +      K G 
Sbjct: 686 DVSLSAGVI----YKFRIKALNQKGYSEPSEPTNTCKTDPKRPARHPTGVKVKDYKKDGF 741

Query: 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEFYYTEY 960
           L + WE +   + N  +  YK+  R   D     +  K Y   G    + I ++  Y +Y
Sbjct: 742 LYVEWEAISPMEHNGEDFKYKLSVRNIAD-----DNTKSYIVAGDKTSKEIETKDTYQKY 796

Query: 961 EVKVQAINDVG 971
            V+V A N VG
Sbjct: 797 GVRVAAENSVG 807


>gi|426357543|ref|XP_004046097.1| PREDICTED: neuronal cell adhesion molecule-like [Gorilla gorilla
           gorilla]
          Length = 1103

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 226/862 (26%), Positives = 360/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTVEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 796 -VPYLIKVQALNDMGFAPEPAV 816



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|302191649|ref|NP_001180512.1| neuronal cell adhesion molecule isoform E precursor [Homo sapiens]
          Length = 1192

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 226/862 (26%), Positives = 360/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 796 -VPYLIKVQALNDMGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|426227603|ref|XP_004007907.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Ovis aries]
          Length = 1183

 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 225/839 (26%), Positives = 351/839 (41%), Gaps = 95/839 (11%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV   + P S        G L IN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT--MKPGS--------GTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVIR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  +N G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLRN-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  P+   +      G+ + LEC+A G P P   W +    LP N  ++
Sbjct: 253 GAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
            NF + L I  V   D G Y C A N   A+  +++++++A P + I   +  +  + D 
Sbjct: 313 RNFKKTLQIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKAAPYWIIAPQNLVLSPEEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
           T  C A G P    SW  NG  +  E  P +D  R    D ++  +    ER  A+YQC 
Sbjct: 373 TLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAVYQCN 427

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWK 623
           A N+     ++A + VL   P    R L S    Y        +  C    +P P   W 
Sbjct: 428 ASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPAIEWF 483

Query: 624 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           KD    GS  R  I+   ENG L I    +D +G Y+C A N  GM ++   L +   P+
Sbjct: 484 KDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 540

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG 739
              + P    +     +   C    +  L     W          D  EL +     +D 
Sbjct: 541 RIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------DHGELPSDGRFTVDK 592

Query: 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 799
             L + + +  D G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT
Sbjct: 593 DYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDRSVQLSWT 652

Query: 800 DGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
            G  N  PIT + I      +    W + +E V G +          + +  L P+  Y 
Sbjct: 653 PGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGTQT---------TAQLKLSPYVNYS 702

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F+V+A N LG   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P
Sbjct: 703 FRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGP 762

Query: 918 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
            + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND G  PE
Sbjct: 763 GLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDAGFAPE 816



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V V  V+ T A + W         G   G  I ++K  +    N          I K
Sbjct: 833 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 885

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 943

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ WEP
Sbjct: 944 IVNPTLDSLTLEWEP 958


>gi|307186116|gb|EFN71841.1| Down syndrome cell adhesion molecule [Camponotus floridanus]
          Length = 1719

 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 213/827 (25%), Positives = 343/827 (41%), Gaps = 101/827 (12%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV--E 267
           +D+ L+C A G P P + W+++      +  + I   S  R  L G  + I   R+V  +
Sbjct: 112 SDVHLTCSAQGSPPPQFTWYRD------VNGHSIPVESFGRIQLWGDLMQI---RRVDAQ 162

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKA--MFCDPPTNYPG 325
           D G Y C+ASN  G    +  +       + N +  P +   N G+   M C     YP 
Sbjct: 163 DAGRYVCRASNHLGE---QRAETHLSVTSKLNARIQPRVQVVNSGETATMNCTV-EGYPV 218

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
            +  W  D  P    +D R+ +     L   ++ + D G Y C V+S   +         
Sbjct: 219 ESVEWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRRDKGMYQCLVRSDKENAQATA---- 274

Query: 386 LKVFPHSNFQQLKFPNNFPK---TFPE-APKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
                     +LK  +  P+   TF E A + G  V L C A G P PS+ W   G PL 
Sbjct: 275 ----------ELKLGDTVPELQYTFIEQALRPGPPVSLRCSATGSPTPSFTWLLDGEPLS 324

Query: 442 RNA---------YFENFNRI---LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
           + A         Y +    +   L I +   ED G Y C ASN  + +E    ++I   P
Sbjct: 325 QIATGHRYAIGQYVDQSGDVISHLNISSAGTEDGGLYACVASNTLATVEHKARLNIYGPP 384

Query: 490 ---NFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
               F+ P + +   ++A +T +  +  +P +  SW ++GE L S +L +E++   F   
Sbjct: 385 VMTPFSFPPSSQE-GSRAQVTCSVTSGDLP-IYISWLKDGEPLPS-SLRIEERGAEFF-- 439

Query: 547 NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV 606
           NVL  + L+  R    Y C A N       +A+L ++ + P +   P E  T  G   NV
Sbjct: 440 NVLVFKELS-SRHSGKYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPQEVATLLGNPLNV 497

Query: 607 TIFCNPEAAPKPKFVWKKDGN---------IIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
              C  +  P P   W +            + GS GR  I  NG+L  +  S  D G Y 
Sbjct: 498 --HCEAKGFPPPHITWLRAKGKMSNDYQPLVDGSDGRLTILPNGSLWTASASPQDEGQYL 555

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N  G   SK   + +H P+ +E     +TI    ++ + C+   +  ++V   W H
Sbjct: 556 CRANNGIGSGLSKVIYVSVHEPARFEFQSENVTIRRGESVTIDCTVIGDNPIEVQ--WMH 613

Query: 718 NGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           N  R+ +M  + L    I  D GL   L I N+   D+G Y C   +  G+      + V
Sbjct: 614 NSDRL-DMSNHRLSIGQIKTDNGLKSQLSIANSDRQDSGVYRCTADNAYGRSEHLIYLAV 672

Query: 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART---NWNSTWFNVSEHVI 831
           +  P  P G++V+E+   S  + W        PI +Y I  R+        W  V  H +
Sbjct: 673 QERPDPPAGLEVIEIGSRSIRLLWKRAFDGNSPIRNYVIQYRSLSHGMTDDWNPVKTHNV 732

Query: 832 ---------GKEVD---------RYTG-RKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
                    G  +            TG  +E ++   L P  TY F++ A N +    P+
Sbjct: 733 TYTPGSSNSGNSIHPTQNDLSPFETTGDDQEVALIGGLHPAVTYTFRIFAINSIDASGPT 792

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
            P     T  + P ++P  I       G+L +SW+P P+E  N   + Y + W + + + 
Sbjct: 793 EPV-VAKTQEEAPTESPQNIKVQPAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSST 851

Query: 933 F---QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
               QS++L   G      V++     +T+Y++ ++A N +  GP S
Sbjct: 852 SGVNQSKSLTVNG-WATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 897



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 196/477 (41%), Gaps = 51/477 (10%)

Query: 330 WARD---YFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSC-NVQSKVSDTGRNGPFF 384
           W RD     P   +   R  V+  G L+  A    D    YSC  + +  S+  R+ P  
Sbjct: 25  WFRDDAILLPGNTDTGGRFVVTSQGDLHIRAARPEDGRATYSCLTLHALTSERRRSEPAT 84

Query: 385 PLKVFPHSNFQQLKFPNNFPKT-FPEAPKAGDKVRLECVAFGYPVPSYNWTR--RGSPLP 441
                P  +      P    ++    + ++G  V L C A G P P + W R   G  +P
Sbjct: 85  LTVTEPTGSLG----PRLMQRSEIAISAESGSDVHLTCSAQGSPPPQFTWYRDVNGHSIP 140

Query: 442 RNAYFENFNRI------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495
                E+F RI      + I  V  +D G Y+CRASN      +   +S+ ++ N  I  
Sbjct: 141 ----VESFGRIQLWGDLMQIRRVDAQDAGRYVCRASNHLGEQRAETHLSVTSKLNARIQP 196

Query: 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN 555
             + +++    T  C   G P  +  W  +G       L  +D     +   VL I  + 
Sbjct: 197 RVQVVNSGETATMNCTVEGYPVESVEWLHDG----VPVLTAQDTRIRLLAPLVLVIGSVG 252

Query: 556 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 615
             RD  MYQC  ++  +   ++A+L++    P  +   +E     G    V++ C+   +
Sbjct: 253 -RRDKGMYQCLVRSDKENAQATAELKLGDTVPELQYTFIEQALRPGP--PVSLRCSATGS 309

Query: 616 PKPKFVWKKDG---NIIGSGGRRKIF----ENGNLL----ISPVSRDDSGIYSCTATNVH 664
           P P F W  DG   + I +G R  I     ++G+++    IS    +D G+Y+C A+N  
Sbjct: 310 PTPSFTWLLDGEPLSQIATGHRYAIGQYVDQSGDVISHLNISSAGTEDGGLYACVASNTL 369

Query: 665 GMDESKGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 722
              E K RL + +GP        PP     +    Q+ CS  + + L +   W  +G  +
Sbjct: 370 ATVEHKARLNI-YGPPVMTPFSFPPSSQEGSR--AQVTCSVTSGD-LPIYISWLKDGEPL 425

Query: 723 -GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             ++ + E      N+    L     S   +G+Y CV  ++  K++    ++V+ PP
Sbjct: 426 PSSLRIEERGAEFFNV----LVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVPP 478



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)

Query: 521 SWFRNGELLNSETLP--LEDQDRYFIQDNV-LTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
           SWFR+  +L    LP   +   R+ +     L IR   PE   A Y C   + L +    
Sbjct: 24  SWFRDDAIL----LPGNTDTGGRFVVTSQGDLHIRAARPEDGRATYSCLTLHALTSERRR 79

Query: 578 AQLRVLT-------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--- 627
           ++   LT       L P   +R  E    A  G +V + C+ + +P P+F W +D N   
Sbjct: 80  SEPATLTVTEPTGSLGPRLMQRS-EIAISAESGSDVHLTCSAQGSPPPQFTWYRDVNGHS 138

Query: 628 -IIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 685
             + S GR +++  G+L+ I  V   D+G Y C A+N  G   ++  L V        ++
Sbjct: 139 IPVESFGRIQLW--GDLMQIRRVDAQDAGRYVCRASNHLGEQRAETHLSVTS--KLNARI 194

Query: 686 PPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 744
            P++ +  +     + C+     +  V   W H+GV +    L   +T    +   +L I
Sbjct: 195 QPRVQVVNSGETATMNCTVEGYPVESVE--WLHDGVPV----LTAQDTRIRLLAPLVLVI 248

Query: 745 TNASFADAGEYECVVKS 761
            +    D G Y+C+V+S
Sbjct: 249 GSVGRRDKGMYQCLVRS 265


>gi|380798909|gb|AFE71330.1| neuronal cell adhesion molecule isoform E precursor, partial
           [Macaca mulatta]
          Length = 1166

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 222/836 (26%), Positives = 350/836 (41%), Gaps = 92/836 (11%)

Query: 185 KIPRGPYFIK---QPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYV 234
           ++P  P  ++   QP  +     K  I++   +I + C A G P PS+ W +     D  
Sbjct: 5   EVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDID 64

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 65  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 114

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 115 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 172

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF- 407
           +G LYFS  L +    +Y C  +   + T +      +KV         K     P TF 
Sbjct: 173 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVI------SAKSSRERPPTFL 226

Query: 408 -PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
            PE   +      G+ + LEC+A G P P   W +    LP+N   ++NF + L I +V 
Sbjct: 227 TPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVS 286

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
             D G Y C A N   A+  ++++ ++A P +     +  +    D T  C A G P   
Sbjct: 287 EADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPR 346

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSA 578
            SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC A N+     ++A
Sbjct: 347 ISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANA 400

Query: 579 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 638
            + VL   P     P  +           + C    +P P   W K     GS     I+
Sbjct: 401 FVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIY 457

Query: 639 ---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
              ENG L I    +D +G Y+C A N  GM +++  L +   P++  + P    +    
Sbjct: 458 VLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWIIKQPEYAVVQRGS 516

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
            +   C    +  L +  +W  +     N +L   E     +D   L I + S  D+G Y
Sbjct: 517 MVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKDHLVIADVSDNDSGTY 569

Query: 756 ECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNG 805
            CV  +T+  +S    + V  P          P  P  +++ +    S  + WT G  N 
Sbjct: 570 TCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNN 629

Query: 806 RPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
            PIT + I      +    W + +E              + + +  L P+  Y F+V+A 
Sbjct: 630 SPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRVMAV 679

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + YK+
Sbjct: 680 NSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV 739

Query: 924 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 740 SWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 790


>gi|426227601|ref|XP_004007906.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Ovis aries]
          Length = 1180

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 231/865 (26%), Positives = 362/865 (41%), Gaps = 104/865 (12%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
           G  PL LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +  
Sbjct: 15  GRAPLMLFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-- 62

Query: 208 ILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN-- 261
              +I + C A G P PS+ W +     D  +D LV   + P S        G L IN  
Sbjct: 63  ---NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIM 109

Query: 262 -DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CD 318
            + +     G Y C A N+ G+ IS ++ +       +  ++   I  +N G+++   C 
Sbjct: 110 SEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRN-GQSLVLPCR 168

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDT 377
           PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T
Sbjct: 169 PPIGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQT 227

Query: 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVP 429
            +      +KV    + +Q       P TF  P+   +      G+ + LEC+A G P P
Sbjct: 228 IQQKQPISVKVISAKSHRQR------PPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTP 281

Query: 430 SYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
              W +    LP N  ++ NF + L I  V   D G Y C A N   A+  +++++++A 
Sbjct: 282 IIYWIKEDGTLPINRTFYRNFKKTLQIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKAA 341

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P + I   +  +  + D T  C A G P    SW  NG  +  E  P +D  R    D +
Sbjct: 342 PYWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTI 398

Query: 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
           +  +    ER  A+YQC A N+     ++A + VL   P        +  Y        +
Sbjct: 399 IFSKVQ--ERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPAL 454

Query: 609 F-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVH 664
             C    +P P   W KD    GS  R  I+   ENG L I    +D +G Y+C A N  
Sbjct: 455 LDCAFFGSPLPAIEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKL 512

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           GM ++   L +   P+   + P    +     +   C    +  L     W         
Sbjct: 513 GMAKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK------- 564

Query: 725 MDLNELETPN-INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP------ 777
            D  EL +     +D   L + + +  D G Y CV  +T+  +S    + V  P      
Sbjct: 565 -DHGELPSDGRFTVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAP 623

Query: 778 ----PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVI 831
               P  P  +++ +    S  + WT G  N  PIT + I      +    W + +E V 
Sbjct: 624 IYDVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VP 682

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
           G +          + +  L P+  Y F+V+A N LG   PS  S QY T A +P + P+ 
Sbjct: 683 GTQT---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTA 733

Query: 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVR 950
           + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V 
Sbjct: 734 VEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVS 790

Query: 951 IPSEFYYTEYEVKVQAINDVGPGPE 975
               F    Y +KVQA+ND G  PE
Sbjct: 791 GTPTF--VPYLIKVQALNDAGFAPE 813



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V V  V+ T A + W         G   G  I ++K  +    N          I K
Sbjct: 830 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ WEP
Sbjct: 941 IVNPTLDSLTLEWEP 955


>gi|51095143|gb|EAL24386.1| neuronal cell adhesion molecule [Homo sapiens]
 gi|119603835|gb|EAW83429.1| neuronal cell adhesion molecule, isoform CRA_c [Homo sapiens]
          Length = 1183

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 219/839 (26%), Positives = 350/839 (41%), Gaps = 89/839 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ +S ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +    ++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-TWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 VKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            + + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
           +A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + 
Sbjct: 706 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQ 765

Query: 921 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 766 YKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 819



 Score = 39.7 bits (91), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958


>gi|35010|emb|CAA42508.1| Neural cell adhesion molecule L1 [Homo sapiens]
          Length = 1257

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 203/810 (25%), Positives = 339/810 (41%), Gaps = 73/810 (9%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQN 310
           T++G N       Q    G Y C ASNK G+ +S  ++L A G          P    + 
Sbjct: 96  TITGNNSNFAQRFQ----GIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEG 151

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
               + C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 152 ESVVLPCNPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 210

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                  T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 211 AHFPGIRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSTHL--VALQGQPLVLECIAEG 268

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+    R   P+P +   ++N N+ L +  V  ED GEY C A N   +   +  ++
Sbjct: 269 FPTPTIKSVRPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVT 328

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 329 VEAAP-YWLHKPQSHLYGPGETARLDCQVEGRPQPEVTWRING-------IPVEELAKDQ 380

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L    K    +++TY 
Sbjct: 381 KYRIQRGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQLPA--KILTADNQTYM 437

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  +DG  +    R   + NG L I  +  +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N          L V    +   Q P          +   C A  +  L  +  W  +
Sbjct: 498 LAANDQNNVTIMANLKVKDA-TQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGD 556

Query: 719 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           G      DL EL ++    I+ G L I +  ++D G Y CV  + +  + ++  ++V G 
Sbjct: 557 G-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGS 611

Query: 778 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSE 828
           PG    + + ++H   ++   + W+    +  PI  Y I      +A   W S       
Sbjct: 612 PGPVPRLVLSDLHLVTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------- 664

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P + 
Sbjct: 665 --LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKN 717

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
           P  + G G +  ++ I+W+PL     NAP + Y++ WR +       E +     V    
Sbjct: 718 PVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPF 772

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + + +   +  YE+KVQA+N  G GPE +V
Sbjct: 773 LVVSNTSTFVPYEIKVQAVNSQGKGPEPQV 802


>gi|297681293|ref|XP_002818392.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Pongo abelii]
          Length = 1180

 Score =  211 bits (537), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 227/862 (26%), Positives = 359/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCVAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N      ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNDYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+NDVG  PE  V
Sbjct: 796 -VPYLIKVQALNDVGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|426227607|ref|XP_004007909.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Ovis aries]
          Length = 1192

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 231/865 (26%), Positives = 362/865 (41%), Gaps = 104/865 (12%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
           G  PL LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +  
Sbjct: 15  GRAPLMLFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-- 62

Query: 208 ILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN-- 261
              +I + C A G P PS+ W +     D  +D LV   + P S        G L IN  
Sbjct: 63  ---NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIM 109

Query: 262 -DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CD 318
            + +     G Y C A N+ G+ IS ++ +       +  ++   I  +N G+++   C 
Sbjct: 110 SEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRN-GQSLVLPCR 168

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDT 377
           PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T
Sbjct: 169 PPIGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQT 227

Query: 378 GRNGPFFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVP 429
            +      +KV    + +Q       P TF  P+   +      G+ + LEC+A G P P
Sbjct: 228 IQQKQPISVKVISAKSHRQR------PPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTP 281

Query: 430 SYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
              W +    LP N  ++ NF + L I  V   D G Y C A N   A+  +++++++A 
Sbjct: 282 IIYWIKEDGTLPINRTFYRNFKKTLQIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKAA 341

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P + I   +  +  + D T  C A G P    SW  NG  +  E  P +D  R    D +
Sbjct: 342 PYWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTI 398

Query: 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
           +  +    ER  A+YQC A N+     ++A + VL   P        +  Y        +
Sbjct: 399 IFSKVQ--ERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPAL 454

Query: 609 F-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVH 664
             C    +P P   W KD    GS  R  I+   ENG L I    +D +G Y+C A N  
Sbjct: 455 LDCAFFGSPLPAIEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKL 512

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           GM ++   L +   P+   + P    +     +   C    +  L     W         
Sbjct: 513 GMAKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK------- 564

Query: 725 MDLNELETPN-INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP------ 777
            D  EL +     +D   L + + +  D G Y CV  +T+  +S    + V  P      
Sbjct: 565 -DHGELPSDGRFTVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAP 623

Query: 778 ----PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVI 831
               P  P  +++ +    S  + WT G  N  PIT + I      +    W + +E V 
Sbjct: 624 IYDVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VP 682

Query: 832 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
           G +          + +  L P+  Y F+V+A N LG   PS  S QY T A +P + P+ 
Sbjct: 683 GTQT---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTA 733

Query: 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVR 950
           + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V 
Sbjct: 734 VEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVS 790

Query: 951 IPSEFYYTEYEVKVQAINDVGPGPE 975
               F    Y +KVQA+ND G  PE
Sbjct: 791 GTPTF--VPYLIKVQALNDAGFAPE 813



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V V  V+ T A + W         G   G  I ++K  +    N          I K
Sbjct: 830 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ WEP
Sbjct: 941 IVNPTLDSLTLEWEP 955


>gi|297289130|ref|XP_002803475.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Macaca
           mulatta]
 gi|387539346|gb|AFJ70300.1| neuronal cell adhesion molecule isoform D precursor [Macaca
           mulatta]
          Length = 1211

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 230/875 (26%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L I + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835


>gi|332237964|ref|XP_003268174.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Nomascus
           leucogenys]
          Length = 1180

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 226/862 (26%), Positives = 360/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIVHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 796 -VPYLIKVQALNDMGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|402864559|ref|XP_003896527.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Papio anubis]
          Length = 1211

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 230/875 (26%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L I + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A ++W         G   G  I ++K  + +  N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|297289128|ref|XP_002803474.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Macaca
           mulatta]
 gi|387539344|gb|AFJ70299.1| neuronal cell adhesion molecule isoform A precursor [Macaca
           mulatta]
          Length = 1304

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 230/875 (26%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L I + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835


>gi|403257024|ref|XP_003921138.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Saimiri
           boliviensis boliviensis]
          Length = 1211

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 228/875 (26%), Positives = 359/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  QN G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASSKEELRGNVLLLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P + +   +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM ++   L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +   + N +          +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KDNEELPNDE-------RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPVPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835


>gi|355747930|gb|EHH52427.1| hypothetical protein EGM_12865 [Macaca fascicularis]
          Length = 1310

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 229/876 (26%), Positives = 361/876 (41%), Gaps = 110/876 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQ-PTDVVFDLSKRSILND 211
           +LF+C+  I  L   L+   T          + + + P   +Q P D + D  +     +
Sbjct: 20  ILFLCQM-ISALEVPLDQKST----------EVLVQPPTITQQSPKDYIIDPRE-----N 63

Query: 212 ITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPR 264
           I + C A G P PS+ W +     D  +D LV                G LIIN   + +
Sbjct: 64  IVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGK 113

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTN 322
                G Y C A N+ G+ IS ++ +       +  ++   I  Q+ G+++   C PP  
Sbjct: 114 AETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIG 172

Query: 323 YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNG 381
            P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +  
Sbjct: 173 LPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQK 231

Query: 382 PFFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLE 420
               +KV                + F   K     P TF  PE   +      G+ + LE
Sbjct: 232 QPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLE 291

Query: 421 CVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           C+A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  
Sbjct: 292 CIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHH 351

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
           ++++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D 
Sbjct: 352 TISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDP 408

Query: 540 DRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
            R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +  
Sbjct: 409 SRKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLY 464

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGI 655
                    + C    +P P   W K     GS     I+   ENG L I    +D +G 
Sbjct: 465 QVIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGT 522

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W
Sbjct: 523 YTCVARNKLGMAKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLW 581

Query: 716 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
             +     N +L   E     +D   L I + S  D+G Y CV  +T+  +S    + V 
Sbjct: 582 LKD-----NRELPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVV 634

Query: 776 GP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STW 823
            P          P  P  +++ +    S  + WT G  N  PIT + I      +    W
Sbjct: 635 APTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLW 694

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
            + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A 
Sbjct: 695 HHQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 744

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYG 942
           +P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    
Sbjct: 745 EPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---A 801

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 802 NVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835


>gi|297681289|ref|XP_002818390.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Pongo abelii]
          Length = 1192

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 227/862 (26%), Positives = 359/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCVAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N      ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNDYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+NDVG  PE  V
Sbjct: 796 -VPYLIKVQALNDVGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|402864561|ref|XP_003896528.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Papio anubis]
          Length = 1304

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 230/875 (26%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L I + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A ++W         G   G  I ++K  + +  N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|332237966|ref|XP_003268175.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Nomascus
           leucogenys]
          Length = 1192

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 226/862 (26%), Positives = 360/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIVHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +   P++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 796 -VPYLIKVQALNDMGFAPEPAV 816



 Score = 39.3 bits (90), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|380798907|gb|AFE71329.1| neuronal cell adhesion molecule isoform D precursor, partial
           [Macaca mulatta]
          Length = 1185

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 223/849 (26%), Positives = 352/849 (41%), Gaps = 99/849 (11%)

Query: 185 KIPRGPYFIK---QPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYV 234
           ++P  P  ++   QP  +     K  I++   +I + C A G P PS+ W +     D  
Sbjct: 5   EVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDID 64

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 65  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 114

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 115 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 172

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 173 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 232

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 233 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 292

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 293 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 352

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 353 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 406

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 407 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 465

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +   P++ 
Sbjct: 466 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWI 522

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 523 IKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKDHL 575

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKT 792
            I + S  D+G Y CV  +T+  +S    + V  P          P  P  +++ +    
Sbjct: 576 VIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDK 635

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           S  + WT G  N  PIT + I      +    W + +E              + + +  L
Sbjct: 636 SVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQLKL 685

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL 
Sbjct: 686 SPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLN 745

Query: 911 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
             + N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND
Sbjct: 746 GFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALND 800

Query: 970 VGPGPESEV 978
           VG  PE  V
Sbjct: 801 VGFAPEPAV 809


>gi|403257026|ref|XP_003921139.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Saimiri
           boliviensis boliviensis]
          Length = 1304

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 228/875 (26%), Positives = 359/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  QN G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASSKEELRGNVLLLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P + +   +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM ++   L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +   + N +          +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KDNEELPNDE-------RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPVPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835


>gi|119611933|gb|EAW91527.1| hCG16415, isoform CRA_d [Homo sapiens]
          Length = 603

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 167/589 (28%), Positives = 258/589 (43%), Gaps = 60/589 (10%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASN 472
           G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN
Sbjct: 15  GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASN 74

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
              ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S 
Sbjct: 75  KMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSA 134

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
                + +R    D ++        R  A+YQC   N+     ++A + VL + P     
Sbjct: 135 P---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS- 188

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVS 649
           P              + C    +P P   W K+G   GS   GG   ++ENG+L I  + 
Sbjct: 189 PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIR 246

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L
Sbjct: 247 KEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSL 305

Query: 710 DVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
            +   W  +   + IGN    E ++         L I   +  D G Y CV  + + +  
Sbjct: 306 KLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDL 356

Query: 768 TKTTVIV---------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 812
            K  + V               +G P  P  +++ ++ + S  + W  G  N  PIT Y 
Sbjct: 357 AKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYV 416

Query: 813 IIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 870
           +    +      W + S         +Y G   +++   L P+  Y+F+VIA NE+G   
Sbjct: 417 VQFEEDQFQPGVWHDHS---------KYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSH 466

Query: 871 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930
           PS PS +Y T    P   P  + G G +  ++ I+W P+       PN+ Y + WR++  
Sbjct: 467 PSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-- 524

Query: 931 TEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESE 977
                ET + + NV +   R  +     Y  YE++VQA ND G GPE E
Sbjct: 525 -----ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE 568



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 145/344 (42%), Gaps = 32/344 (9%)

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
           DK  F +++ AL  + + + D+G Y C   +K+    R+     +K  P+   +      
Sbjct: 44  DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDE------ 96

Query: 402 NFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNV 458
             PK    AP  G+  RL C A G P P+  W   G PL   P N   E     +   + 
Sbjct: 97  --PKNLILAP--GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 152

Query: 459 KVEDQGEYICRASNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTCEAFG 514
           ++  +  Y C  SN+   L ++  +S+    P    P   L    + N+  L   C  FG
Sbjct: 153 QISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRL--DCPFFG 210

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
            P  T  WF+NG+  N     L+  + +  ++  L I+ +  E D  +Y C A N L   
Sbjct: 211 SPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATNILGK- 263

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG 632
            +  Q+R+    P+   R +  +  A  G  V + C  +  P  K    W KD   +  G
Sbjct: 264 -AENQVRLEVKDPTRIYR-MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIG 321

Query: 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
            R K  E+ +L I  V+  D G Y+C A+     D +K  L VL
Sbjct: 322 NRMK-KEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVL 364



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 151/383 (39%), Gaps = 43/383 (11%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK-RFTLSGGNLIINDPRQVEDR 269
           D+ L C A G P P   W+K+            D  SDK +F      L I +  + ED 
Sbjct: 17  DLLLECIASGVPTPDIAWYKKGG----------DLPSDKAKFENFNKALRITNVSE-EDS 65

Query: 270 GSYHCKASNKFGSI---ISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
           G Y C ASNK GSI   IS  V+ A  ++ E  NL  AP    +   +A     PT    
Sbjct: 66  GEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWM 125

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
           VN    +   PN   E     V+ D  + F   +      Y CN  ++      N     
Sbjct: 126 VNGEPLQSAPPNPNRE-----VAGD-TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSV 179

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR--RGSPLPRN 443
           L V P    + L   N   +         ++ RL+C  FG P+P+  W +  +GS L   
Sbjct: 180 LDVPP----RMLSPRNQLIRVI-----LYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGG 230

Query: 444 AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
            Y    N  L I  ++ EDQG Y C A+N     E+ V + ++          D+     
Sbjct: 231 NYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRG 290

Query: 504 ADLTWTCEAFGVPD--VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             +   C     P   +T SW ++ E       PL   +R   +D+ LTI +   ERD  
Sbjct: 291 TTVQLECRVKHDPSLKLTVSWLKDDE-------PLYIGNRMKKEDDSLTI-FGVAERDQG 342

Query: 562 MYQCRAKNQLKTRYSSAQLRVLT 584
            Y C A  +L    + A L VL 
Sbjct: 343 SYTCVASTELDQDLAKAYLTVLA 365


>gi|29466306|emb|CAD65848.1| NrCAM protein [Mus musculus]
 gi|162318336|gb|AAI57008.1| Neuron-glia-CAM-related cell adhesion molecule [synthetic
           construct]
 gi|162319098|gb|AAI56236.1| Neuron-glia-CAM-related cell adhesion molecule [synthetic
           construct]
          Length = 1251

 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 219/841 (26%), Positives = 345/841 (41%), Gaps = 102/841 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYVQDRLVANL 242
           P  + QP  +     K  I++   +I + C A G P PS+ W +     D  +D LV   
Sbjct: 28  PLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT-- 85

Query: 243 IDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
           + P S        G L+IN   + +     G Y C A N+ G+ +S ++ +       + 
Sbjct: 86  MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 137

Query: 300 LKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS- 356
            +R   I  QN G+++   C PP   P    +W  + F   + + +RV    +G LYFS 
Sbjct: 138 KERLEPIVLQN-GQSLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSN 195

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFPNNF 403
            L +    +Y C  +   + T +      LKV                + F   K     
Sbjct: 196 VLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKER 255

Query: 404 PKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILT 454
           P TF  PE  ++      G+ + LEC+A G P P   W +    LP N  ++ NF + L 
Sbjct: 256 PPTFLTPEGNESHKEELRGNVLSLECIAEGLPTPIIYWIKEDGMLPANRTFYRNFKKTLQ 315

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG 514
           I +V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C A G
Sbjct: 316 ITHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANG 375

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKT 573
            P    SW  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+   
Sbjct: 376 NPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQCNASNKYGY 429

Query: 574 RYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIG 630
             ++A + VL   P    R L S    Y        +  C    +P P   W K     G
Sbjct: 430 LLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--G 483

Query: 631 SGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 687
           S     I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+   + P 
Sbjct: 484 SALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQPE 542

Query: 688 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 747
              +     +   C    +  L    +W  +   + N +         + D   L +++ 
Sbjct: 543 YAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDKDHLVVSDV 595

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQ 797
              D G Y C   +T+   S    + V  P          P  P  +++      S  + 
Sbjct: 596 KDDDGGTYTCTANTTLDSASASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLT 655

Query: 798 WTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
           WT G  N  PIT + I      +    W + +E              + + +  L P+  
Sbjct: 656 WTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE----------VSGTQTTAQLKLSPYVN 705

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           Y F+V+A N +G   PS  S QY T A +P Q P  + G G +  +L I+W+PL   + N
Sbjct: 706 YSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSN 765

Query: 916 APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  P
Sbjct: 766 GPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAP 820

Query: 975 E 975
           E
Sbjct: 821 E 821


>gi|6651381|gb|AAF22283.1|AF172277_2 NgCAM-related related cell adhesion molecule /alternative carboxyl
           terminus [Homo sapiens]
          Length = 1236

 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 227/875 (25%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 835



 Score = 39.7 bits (91), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|225637533|ref|NP_795904.3| neuronal cell adhesion molecule isoform 1 precursor [Mus musculus]
 gi|38372441|sp|Q810U4.2|NRCAM_MOUSE RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
           AltName: Full=Neuronal surface protein Bravo;
           Short=mBravo; AltName: Full=NgCAM-related cell adhesion
           molecule; Short=Ng-CAM-related; Flags: Precursor
          Length = 1256

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 219/841 (26%), Positives = 345/841 (41%), Gaps = 102/841 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYVQDRLVANL 242
           P  + QP  +     K  I++   +I + C A G P PS+ W +     D  +D LV   
Sbjct: 33  PLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT-- 90

Query: 243 IDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
           + P S        G L+IN   + +     G Y C A N+ G+ +S ++ +       + 
Sbjct: 91  MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWT 142

Query: 300 LKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS- 356
            +R   I  QN G+++   C PP   P    +W  + F   + + +RV    +G LYFS 
Sbjct: 143 KERLEPIVLQN-GQSLVLPCRPPIGLPPAIIFWMDNSF-QRLPQSERVSQGLNGDLYFSN 200

Query: 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQQLKFPNNF 403
            L +    +Y C  +   + T +      LKV                + F   K     
Sbjct: 201 VLPEDTREDYICYARFNHTQTIQQKQPISLKVISVDELNDTIAANLSDTEFYGAKSSKER 260

Query: 404 PKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILT 454
           P TF  PE  ++      G+ + LEC+A G P P   W +    LP N  ++ NF + L 
Sbjct: 261 PPTFLTPEGNESHKEELRGNVLSLECIAEGLPTPIIYWIKEDGMLPANRTFYRNFKKTLQ 320

Query: 455 IPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG 514
           I +V   D G Y C A N   A+  +++++++A P + +   +  +    + T  C A G
Sbjct: 321 ITHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANG 380

Query: 515 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKT 573
            P    SW  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+   
Sbjct: 381 NPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQCNASNKYGY 434

Query: 574 RYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIG 630
             ++A + VL   P    R L S    Y        +  C    +P P   W K     G
Sbjct: 435 LLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--G 488

Query: 631 SGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 687
           S     I+   +NG L I    +D +G Y+C A N  GM +++  L +   P+   + P 
Sbjct: 489 SALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQPE 547

Query: 688 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 747
              +     +   C    +  L    +W  +   + N +         + D   L +++ 
Sbjct: 548 YAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDKDHLVVSDV 600

Query: 748 SFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQ 797
              D G Y C   +T+   S    + V  P          P  P  +++      S  + 
Sbjct: 601 KDDDGGTYTCTANTTLDSASASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQLDKSVQLT 660

Query: 798 WTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
           WT G  N  PIT + I      +    W + +E              + + +  L P+  
Sbjct: 661 WTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE----------VSGTQTTAQLKLSPYVN 710

Query: 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
           Y F+V+A N +G   PS  S QY T A +P Q P  + G G +  +L I+W+PL   + N
Sbjct: 711 YSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSN 770

Query: 916 APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
            P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  P
Sbjct: 771 GPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAP 825

Query: 975 E 975
           E
Sbjct: 826 E 826


>gi|302191647|ref|NP_001180511.1| neuronal cell adhesion molecule isoform D precursor [Homo sapiens]
          Length = 1211

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 227/875 (25%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 835



 Score = 39.7 bits (91), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|380798931|gb|AFE71341.1| neuronal cell adhesion molecule isoform A precursor, partial
           [Macaca mulatta]
          Length = 1278

 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 223/849 (26%), Positives = 352/849 (41%), Gaps = 99/849 (11%)

Query: 185 KIPRGPYFIK---QPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYV 234
           ++P  P  ++   QP  +     K  I++   +I + C A G P PS+ W +     D  
Sbjct: 5   EVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDID 64

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 65  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAISNNIVVR 114

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 115 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 172

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 173 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 232

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 233 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 292

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 293 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 352

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 353 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 406

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 407 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 465

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +   P++ 
Sbjct: 466 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTWI 522

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 523 IKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKDHL 575

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKT 792
            I + S  D+G Y CV  +T+  +S    + V  P          P  P  +++ +    
Sbjct: 576 VIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDK 635

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           S  + WT G  N  PIT + I      +    W + +E              + + +  L
Sbjct: 636 SVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQLKL 685

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL 
Sbjct: 686 SPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLN 745

Query: 911 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
             + N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND
Sbjct: 746 GFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALND 800

Query: 970 VGPGPESEV 978
           VG  PE  V
Sbjct: 801 VGFAPEPAV 809


>gi|296488522|tpg|DAA30635.1| TPA: neuronal cell adhesion molecule isoform 2 [Bos taurus]
          Length = 1183

 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 222/838 (26%), Positives = 351/838 (41%), Gaps = 93/838 (11%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P+PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPSPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV   + P S        G L IN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT--MKPGS--------GTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVIR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  +N G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPIILRN-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  P+   +      G+ + LEC+A G P P   W +    LP N  ++
Sbjct: 253 GAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
            NF + L I  V   D G Y C A N   A+  +++++++A P + I   +  +  + D 
Sbjct: 313 RNFKKTLQIVQVTEADSGNYQCIAKNALGAIHHTISVTVKAAPYWIIAPQNLVLSPEEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
           T  C A G P    SW  NG  +  E  P +D  R    D ++  +    ER  A+YQC 
Sbjct: 373 TLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAVYQCN 427

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWK 623
           A N+     ++A + VL   P    R L S    Y        +  C    +P P   W 
Sbjct: 428 ASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTIEWF 483

Query: 624 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           K     GS  R  I+   ENG L I    +D +G Y+C A N  GM ++   L +   P+
Sbjct: 484 KGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 540

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 740
              + P    +     +   C    +  L    +W  +   + N            +D  
Sbjct: 541 RIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPN-------DGRFTVDKD 593

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 800
            L + + +  D G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT 
Sbjct: 594 RLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDRSVQLSWTP 653

Query: 801 GATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 858
           G  N  PIT + I      +    W + +E V G +          + +  L P+  Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHEPGLWHHQTE-VPGTQT---------TAQLKLSPYVNYSF 703

Query: 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 918
           +V+A N LG   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P 
Sbjct: 704 RVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763

Query: 919 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND G  PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDAGFAPE 816



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  +    N          I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 885

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 943

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ WEP
Sbjct: 944 IVNPTLDSLTLEWEP 958


>gi|168278575|dbj|BAG11167.1| neuronal cell adhesion molecule precursor [synthetic construct]
          Length = 1180

 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 227/862 (26%), Positives = 361/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +    ++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            +G +  +  N L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 VSGTQTTAQLN-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 796 -VPYLIKVQALNDMGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|119603833|gb|EAW83427.1| neuronal cell adhesion molecule, isoform CRA_a [Homo sapiens]
          Length = 1181

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 219/836 (26%), Positives = 349/836 (41%), Gaps = 92/836 (11%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ +S ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF- 407
           +G LYFS  L +    +Y C  +   + T +      +KV         K     P TF 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVI------SAKSSRERPPTFL 246

Query: 408 -PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVK 459
            PE   +      G+ + LEC+A G P P   W +    LP+N   ++NF + L I +V 
Sbjct: 247 TPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVS 306

Query: 460 VEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT 519
             D G Y C A N   A+  ++++ ++A P +     +  +    D T  C A G P   
Sbjct: 307 EADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPR 366

Query: 520 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSA 578
            SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC A N+     ++A
Sbjct: 367 ISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANA 420

Query: 579 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 638
            + VL   P     P  +           + C    +P P   W K     GS     I+
Sbjct: 421 FVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIY 477

Query: 639 ---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
              ENG L I    +D +G Y+C A N  GM +++  L +    ++  + P    +    
Sbjct: 478 VLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-TWIVKQPEYAVVQRGS 536

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
            +   C    +  L +  +W  +     N +L   E     +D   L + + S  D+G Y
Sbjct: 537 MVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTY 589

Query: 756 ECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNG 805
            CV  +T+  +S    + V  P          P  P  +++ +    S  + WT G  N 
Sbjct: 590 TCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNN 649

Query: 806 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 863
            PIT + I      +    W + +E              + + +  L P+  Y F+V+A 
Sbjct: 650 SPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRVMAV 699

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P + YK+
Sbjct: 700 NSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKV 759

Query: 924 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 760 SWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 810


>gi|330864743|ref|NP_001193491.1| neuronal cell adhesion molecule [Bos taurus]
          Length = 1180

 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 227/863 (26%), Positives = 358/863 (41%), Gaps = 100/863 (11%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
           G  PL LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +  
Sbjct: 15  GRAPLMLFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-- 62

Query: 208 ILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN-- 261
              +I + C A G P+PS+ W +     D  +D LV   + P S        G L IN  
Sbjct: 63  ---NIVIQCEAKGKPSPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIM 109

Query: 262 -DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCDP 319
            + +     G Y C A N+ G+ IS ++ +       +  ++  P I        + C P
Sbjct: 110 SEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPIILRNGQSLVLPCRP 169

Query: 320 PTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTG 378
           P   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T 
Sbjct: 170 PIGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTI 228

Query: 379 RNGPFFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPS 430
           +      +KV    + +Q       P TF  P+   +      G+ + LEC+A G P P 
Sbjct: 229 QQKQPISVKVISAKSHRQR------PPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTPI 282

Query: 431 YNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
             W +    LP N  ++ NF + L I  V   D G Y C A N   A+  +++++++A P
Sbjct: 283 IYWIKEDGTLPINRTFYRNFKKTLQIVQVTEADSGNYQCIAKNALGAIHHTISVTVKAAP 342

Query: 490 NFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVL 549
            + I   +  +  + D T  C A G P    SW  NG  +  E  P +D  R    D ++
Sbjct: 343 YWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTII 399

Query: 550 TIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF 609
             +    ER  A+YQC A N+     ++A + VL   P        +  Y        + 
Sbjct: 400 FSKVQ--ERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPALL 455

Query: 610 -CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHG 665
            C    +P P   W K     GS  R  I+   ENG L I    +D +G Y+C A N  G
Sbjct: 456 DCAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLG 513

Query: 666 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 725
           M ++   L +   P+   + P    +     +   C    +  L    +W  +   + N 
Sbjct: 514 MAKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPND 572

Query: 726 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 777
                      +D   L + + +  D G Y CV  +T+  +S    + V  P        
Sbjct: 573 G-------RFTVDKDRLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 625

Query: 778 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGK 833
             P  P  +++ +    S  + WT G  N  PIT + I      +    W + +E V G 
Sbjct: 626 DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE-VPGT 684

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           +          + +  L P+  Y F+V+A N LG   PS  S QY T A +P + P+ + 
Sbjct: 685 QT---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVE 735

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 952
           G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V   
Sbjct: 736 GLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 792

Query: 953 SEFYYTEYEVKVQAINDVGPGPE 975
             F    Y +KVQA+ND G  PE
Sbjct: 793 PTF--VPYLIKVQALNDAGFAPE 813



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  +    N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ WEP
Sbjct: 941 IVNPTLDSLTLEWEP 955


>gi|6651380|gb|AAF22282.1|AF172277_1 NgCAM-related related cell adhesion molecule [Homo sapiens]
          Length = 1308

 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 227/875 (25%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 835



 Score = 39.3 bits (90), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|109731501|gb|AAI14571.1| NRCAM protein [Homo sapiens]
          Length = 1180

 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 225/862 (26%), Positives = 359/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +    ++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 796 -VPYLIKVQALNDMGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|344306192|ref|XP_003421772.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
           L1-like [Loxodonta africana]
          Length = 1205

 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 195/806 (24%), Positives = 336/806 (41%), Gaps = 64/806 (7%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++ L   +        F
Sbjct: 36  VITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGIHFKPEEELGVTVHQAAHSGSF 95

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW 311
           T +G N           +G+Y C ASNK G+ +S  +QL      +++ +    +  +  
Sbjct: 96  TFTGNNNFAQ-----RFQGTYRCFASNKLGTAMSHEIQLVAEGAPKWSKETVKPVEVEEG 150

Query: 312 GKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQID-AGNYSCN 369
              +  C PP +      YW      + +++D+RV +  DG LYF+ +   D   +Y C+
Sbjct: 151 EPVVLPCHPPLSAEPPRIYWMNSKILH-IKQDERVTMGQDGNLYFANVLTTDNHSDYICH 209

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 210 AHFLGARTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 267

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N       +  ++
Sbjct: 268 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLVNVGEEDDGEYRCLAENPLGTARHAYYVT 327

Query: 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544
           ++A P +      +           C+  G P    +W  NG  L   +   EDQ     
Sbjct: 328 VEAAPYWLHKPQSQLYGPGETARLDCQVQGRPQPEVTWRINGIPLTELS---EDQKYRTQ 384

Query: 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG 604
           Q + L +  + P  D  + QC A+N+     ++A + V+ L P+    P      A EG 
Sbjct: 385 QGDALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQL-PTKILTPDNQTYLAVEGS 442

Query: 605 NVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 663
              +      AP P   W  ++G  +    R   + NG L I  +  +D+  Y C ATN 
Sbjct: 443 TAYLLFKAFGAPVPSIQWLDEEGATVLQDERFFPYANGTLGIRDLQANDTARYFCQATN- 501

Query: 664 HGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720
              D++   ++    +   +   Q P          +   C A  +  L  +  W  +G 
Sbjct: 502 ---DQNNVTIVANLQVKDATRITQGPQSAIEKKGSRVTFTCQASFDPSLKHSITWRRDG- 557

Query: 721 RIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779
                DL EL ++    I+   L I +  ++D G Y CV  + +  + ++  ++V G PG
Sbjct: 558 ----RDLQELGDSDKYFIEDSRLIIQSLDYSDQGNYSCVASTKLDVVESRAQLLVVGSPG 613

Query: 780 LPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKE 834
               +++ + H   +    + W+    +  PI  Y I    +      W+++ + V G +
Sbjct: 614 PVPQLELSDRHLLKQCQVRLSWSPAEDHNAPIEKYDIEFEDKKMEPEKWYSLGK-VPGNQ 672

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                     S    L P+  Y F+V A N+ G GEPS  S    TP   P + P  + G
Sbjct: 673 T---------STTLKLSPYIHYTFRVTAINKYGPGEPSPASETVLTPEAAPEKNPVDVRG 723

Query: 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN--DTEFQSETLKEYGNVGIAVVRIP 952
            G +  ++ I+W+PL     NAP + Y++ WR +      +Q + L +        + + 
Sbjct: 724 EGNETNNMVITWKPLKWMDWNAPQVQYRVQWRPQGVRGAAWQEQILSK------PFLVVT 777

Query: 953 SEFYYTEYEVKVQAINDVGPGPESEV 978
           +   +  YE++VQA+N  G GPE  V
Sbjct: 778 NTSTFVPYEIRVQAVNSQGKGPEPHV 803


>gi|109730333|gb|AAI15737.1| NRCAM protein [Homo sapiens]
          Length = 1192

 Score =  209 bits (532), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 225/862 (26%), Positives = 359/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 287 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 459

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 460 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +    ++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 518 EVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPS 571

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 572 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 629

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 630 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE--------- 680

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                + + +  L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 681 -VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 739

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 740 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 795

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 796 -VPYLIKVQALNDMGFAPEPAV 816



 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955


>gi|40788219|dbj|BAA20801.2| KIAA0343 [Homo sapiens]
          Length = 1187

 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 227/862 (26%), Positives = 361/862 (41%), Gaps = 101/862 (11%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 27  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 71

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 72  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 121

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 122 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 180

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 181 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 239

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 240 PISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWA 293

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP+N   ++NF + L I +V   D G Y C A N   A+  ++++ ++A P +  
Sbjct: 294 KEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWIT 353

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D T  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 354 APQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIF 407

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            N  ER  A+YQC A N+     ++A + VL   P     P  +           + C  
Sbjct: 408 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAF 466

Query: 613 EAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
             +P P   W K     GS     I+   ENG L I    +D +G Y+C A N  GM ++
Sbjct: 467 FGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 524

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           +  L +    ++  + P    +     +   C    +  L +  +W  +     N +L  
Sbjct: 525 EVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPS 578

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
            E     +D   L + + S  D+G Y CV  +T+  +S    + V  P          P 
Sbjct: 579 DE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPN 636

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++ +    S  + WT G  N  PIT + I      +    W + +E         
Sbjct: 637 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE--------- 687

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            +G +  +  N L P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G 
Sbjct: 688 VSGTQTTAQLN-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGS 746

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 747 EPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 802

Query: 957 YTEYEVKVQAINDVGPGPESEV 978
              Y +KVQA+ND+G  PE  V
Sbjct: 803 -VPYLIKVQALNDMGFAPEPAV 823



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 837 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 889

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 890 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 947

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 948 IVNPTLDSLTLEWDP 962


>gi|397479949|ref|XP_003811262.1| PREDICTED: neuronal cell adhesion molecule [Pan paniscus]
          Length = 1304

 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 227/875 (25%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 835


>gi|81158226|ref|NP_001032209.1| neuronal cell adhesion molecule isoform A precursor [Homo sapiens]
 gi|215274127|sp|Q92823.3|NRCAM_HUMAN RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
           AltName: Full=Neuronal surface protein Bravo;
           Short=hBravo; AltName: Full=NgCAM-related cell adhesion
           molecule; Short=Ng-CAM-related; Flags: Precursor
          Length = 1304

 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 227/875 (25%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 835


>gi|344235989|gb|EGV92092.1| Neural cell adhesion molecule L1 [Cricetulus griseus]
          Length = 1287

 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 203/831 (24%), Positives = 337/831 (40%), Gaps = 103/831 (12%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           +DI+L C A G P   + W K+      ++ L   + +      FT+ G N         
Sbjct: 44  DDISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQ----- 98

Query: 267 EDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
             +G Y C ASNK G+ +S  +QL A G          P    +     + C+PP +   
Sbjct: 99  RFQGIYRCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAP 158

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           +  YW      + +++D+RV +  +G LYF+  L   +  +Y CN     + T       
Sbjct: 159 LRIYWMNSKILH-IKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPI 217

Query: 385 PLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL 440
            L+V P ++      +L FP N           G  + LEC+A G+P P+  W     P+
Sbjct: 218 DLRVKPTNSMIDRKPRLLFPTNSSSRL--VALQGQPLILECIAEGFPTPTIKWLHPSDPM 275

Query: 441 PRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 499
           P +   ++N N+ L + NV  ED GEY C A N   +   +  ++++A P + +     H
Sbjct: 276 PAHRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP-YWLQKPQSH 334

Query: 500 MDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 558
           +    +     C+  G P    +W  NG  +      +    +Y I+   L +  + P  
Sbjct: 335 LYGPGETARLDCQVQGRPQPEVTWSINGMSMEK----VNKDQKYRIEQGSLILSNVQPS- 389

Query: 559 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPK 617
           D  + QC A+NQ     ++A + V+ L      +  +++TY A EG    + C    AP 
Sbjct: 390 DTMVTQCEARNQHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPV 447

Query: 618 PKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
           P   W  ++G  +    R   + NG L I  +  +D+G Y C A N          L V 
Sbjct: 448 PSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTILANLQVK 507

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNI 735
                 E     I     R +   C A  +  L  +  W  +G      DL E  ++   
Sbjct: 508 EATQITEGPRSAIEKKGAR-VTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKY 561

Query: 736 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE---VHKT 792
            I+ G L I +  ++D G Y CV  + + ++ ++  ++V G PG    +++ +   + ++
Sbjct: 562 FIEDGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVSHLELSDRYLLKQS 621

Query: 793 SATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
              + W+    +  PI  Y I      +A   W S         +GK         + S 
Sbjct: 622 QVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTST 667

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK---------------------- 884
              L P+  Y F+V A N+ G GEPS  S    TP  +                      
Sbjct: 668 TLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAELRTTAAVLELLSYCFMGQSGPF 727

Query: 885 -----------------PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
                            P + P  + G G +  ++ I+W+PL     NAP + Y++ WR 
Sbjct: 728 VPCPCCSTDRLTHYFPAPEKNPVDVRGEGNETNNMVITWKPLWWMDWNAPQVQYRVQWRP 787

Query: 928 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           +     + ET KE   V    + + +   +  YE+KVQA+N+ G GPE +V
Sbjct: 788 QG----KQETWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQV 833


>gi|410952030|ref|XP_003982692.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Felis catus]
          Length = 1181

 Score =  209 bits (531), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 227/864 (26%), Positives = 356/864 (41%), Gaps = 105/864 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV   + P S        G L IN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++   I  +N G+++          
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQSLVLPCRPPLGL 173

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKPNRERPPTFLTPEGNTSNKEELRGNVLSLECIAEGLPTPVIYWI 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP N  ++ NF + L I  V   D G Y C A N   A+  +++++++A P + +
Sbjct: 287 KEDGTLPTNRTFYRNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKAAPYWIL 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D +  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGSLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CN 611
            N  ER  A+YQC A N+     ++A + VL   P        +  Y        +  C 
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPALLDCA 458

Query: 612 PEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDE 668
              +P P   W K     GS  R  I+   ENG L I    +D +G Y+C A N  GM +
Sbjct: 459 FFGSPLPTIEWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAK 516

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
           ++  L +   P+   + P    +     +   C    +  L +   W          D  
Sbjct: 517 NEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------DNG 567

Query: 729 ELETPN-INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP---------- 777
           EL +     +D   LE+ +   +D G Y CV  +T+  +S    + V  P          
Sbjct: 568 ELPSDGRFTVDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDV 627

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEV 835
           P  P  +++ +    S  + WT G  N  PIT + I      +    W + +E       
Sbjct: 628 PNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE------- 680

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
                  + + +  L P+  Y F+V+A N LG   PS PS QY T A +P   P+ + G 
Sbjct: 681 ---VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGL 737

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 954
           G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     
Sbjct: 738 GSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGTPT 794

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
           F    Y +KVQA+NDVG  PE  V
Sbjct: 795 F--VPYLIKVQALNDVGFAPEPAV 816


>gi|410952032|ref|XP_003982693.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Felis catus]
          Length = 1193

 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 227/864 (26%), Positives = 356/864 (41%), Gaps = 105/864 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV   + P S        G L IN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++   I  +N G+++          
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQSLVLPCRPPLGL 173

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWT 434
              +KV         K     P TF  PE   +      G+ + LEC+A G P P   W 
Sbjct: 233 PISVKVI------SAKPNRERPPTFLTPEGNTSNKEELRGNVLSLECIAEGLPTPVIYWI 286

Query: 435 RRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493
           +    LP N  ++ NF + L I  V   D G Y C A N   A+  +++++++A P + +
Sbjct: 287 KEDGTLPTNRTFYRNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKAAPYWIL 346

Query: 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
              +  +    D +  C A G P    SW  NG  +  E  P +D  R    D   TI +
Sbjct: 347 APQNLVLSPGEDGSLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIF 400

Query: 554 LN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CN 611
            N  ER  A+YQC A N+     ++A + VL   P        +  Y        +  C 
Sbjct: 401 SNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS--ANTLYQVIANRPALLDCA 458

Query: 612 PEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDE 668
              +P P   W K     GS  R  I+   ENG L I    +D +G Y+C A N  GM +
Sbjct: 459 FFGSPLPTIEWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAK 516

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
           ++  L +   P+   + P    +     +   C    +  L +   W          D  
Sbjct: 517 NEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------DNG 567

Query: 729 ELETPN-INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP---------- 777
           EL +     +D   LE+ +   +D G Y CV  +T+  +S    + V  P          
Sbjct: 568 ELPSDGRFTVDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDV 627

Query: 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEV 835
           P  P  +++ +    S  + WT G  N  PIT + I      +    W + +E       
Sbjct: 628 PNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE------- 680

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
                  + + +  L P+  Y F+V+A N LG   PS PS QY T A +P   P+ + G 
Sbjct: 681 ---VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGL 737

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 954
           G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     
Sbjct: 738 GSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGTPT 794

Query: 955 FYYTEYEVKVQAINDVGPGPESEV 978
           F    Y +KVQA+NDVG  PE  V
Sbjct: 795 F--VPYLIKVQALNDVGFAPEPAV 816


>gi|426257394|ref|XP_004022312.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Ovis aries]
          Length = 1252

 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 200/821 (24%), Positives = 348/821 (42%), Gaps = 81/821 (9%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDYV---QDRLVANLID 244
           + + +P  +     +R ++   +D++L C A G P   + W ++  +   ++ L   +  
Sbjct: 29  HHVMEPPIITEQSPRRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPKEELGMIVNQ 88

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
                 F+++G +       Q    G Y C ASNK G+ +S  +QL      ++  +   
Sbjct: 89  APHSGSFSITGNSSNFAQSFQ----GIYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVK 144

Query: 305 EIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
            +  +     +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +
Sbjct: 145 PVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDN 203

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDKVR 418
             +Y C+     + T        L+V   ++       L FP N           G  + 
Sbjct: 204 HSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHL--VALQGQPLV 261

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   + 
Sbjct: 262 LECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSD 321

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +  ++++A P + +     H+    +     C+  G P    +W  NG       +P+
Sbjct: 322 RHAYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPV 373

Query: 537 ED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           E+     +Y I    L +  L P    A  QC  +N+     ++A + V+ L P+    P
Sbjct: 374 EELGKDQKYRIHHGALVLSNLQPSDTVA--QCEPRNRHGLLLANAYIYVVEL-PAKILTP 430

Query: 594 LESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRD 651
            ++ETY A +G    + C    AP P   W  ++G  +    R   + NG L I  +  +
Sbjct: 431 -DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQAN 489

Query: 652 DSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           D+G Y C A N    D+S   ++    +   +   Q P          +   C A  +  
Sbjct: 490 DTGHYFCQAAN----DQSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPS 545

Query: 709 LDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
           L  +  W     R   +DL EL ++    I+   L I +  ++D G Y CV  + +  + 
Sbjct: 546 LQHSTTW-----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVE 600

Query: 768 TKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTN 818
           ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I      +A   
Sbjct: 601 SQAELLVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEK 660

Query: 819 WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878
           W S         +GK         + S    L P+  Y F+V A N+ G GEPS  S   
Sbjct: 661 WYS---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETV 706

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSET 937
            TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +K    +Q + 
Sbjct: 707 VTPEAAPEKNPVDVKGEGNETNNMIITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQI 766

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + +       VV   S F    YE+KVQ +N  G GPE ++
Sbjct: 767 VSD----PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQI 801


>gi|426257392|ref|XP_004022311.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Ovis aries]
          Length = 1247

 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 196/814 (24%), Positives = 346/814 (42%), Gaps = 82/814 (10%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDYV---QDRLVANLIDPLSDKRF 251
           ++ + S R ++    +D++L C A G P   + W ++  +   ++ L   +        F
Sbjct: 31  IITEQSPRRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPKEELGMIVNQAPHSGSF 90

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW 311
           +++G +       Q    G Y C ASNK G+ +S  +QL      ++  +    +  +  
Sbjct: 91  SITGNSSNFAQSFQ----GIYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVEEG 146

Query: 312 GKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
              +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 147 ESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 205

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++       L FP N           G  + LEC+A G
Sbjct: 206 AHFPGTRTIIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHL--VALQGQPLVLECIAEG 263

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +   +  ++
Sbjct: 264 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVT 323

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 324 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELGKDQ 375

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y I    L +  L P    A  QC  +N+     ++A + V+ L P+    P ++ETY 
Sbjct: 376 KYRIHHGALVLSNLQPSDTVA--QCEPRNRHGLLLANAYIYVVEL-PAKILTP-DNETYM 431

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A +G    + C    AP P   W  ++G  +    R   + NG L I  +  +D+G Y C
Sbjct: 432 AVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 491

Query: 659 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
            A N    D+S   ++    +   +   Q P          +   C A  +  L  +  W
Sbjct: 492 QAAN----DQSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHSTTW 547

Query: 716 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
                R   +DL EL ++    I+   L I +  ++D G Y CV  + +  + ++  ++V
Sbjct: 548 -----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLV 602

Query: 775 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 825
            G PG    +++ + H   ++   + W+    +  PI  Y I      +A   W S    
Sbjct: 603 VGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 658

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
                +GK         + S    L P+  Y F+V A N+ G GEPS  S    TP   P
Sbjct: 659 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 708

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNV 944
            + P  + G G +  ++ I+W+PL     NAP + Y++ WR +K    +Q + + +    
Sbjct: 709 EKNPVDVKGEGNETNNMIITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSD---- 764

Query: 945 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               + + +   +  YE+KVQ +N  G GPE ++
Sbjct: 765 --PFLVVSNTSTFVPYEIKVQTVNSQGKGPEPQI 796


>gi|297681287|ref|XP_002818389.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Pongo abelii]
          Length = 1211

 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 228/875 (26%), Positives = 361/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCVAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N      ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|426257390|ref|XP_004022310.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Ovis aries]
          Length = 1256

 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 200/821 (24%), Positives = 348/821 (42%), Gaps = 81/821 (9%)

Query: 191 YFIKQPTDVVFDLSKRSIL---NDITLSCYAGGYPNPSYEWFKEDYV---QDRLVANLID 244
           + + +P  +     +R ++   +D++L C A G P   + W ++  +   ++ L   +  
Sbjct: 29  HHVMEPPIITEQSPRRVVVFPTDDVSLKCEASGKPEVQFRWTRDGILFKPKEELGMIVNQ 88

Query: 245 PLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAP 304
                 F+++G +       Q    G Y C ASNK G+ +S  +QL      ++  +   
Sbjct: 89  APHSGSFSITGNSSNFAQSFQ----GIYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVK 144

Query: 305 EIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
            +  +     +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +
Sbjct: 145 PVEVEEGESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDN 203

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ----QLKFPNNFPKTFPEAPKAGDKVR 418
             +Y C+     + T        L+V   ++       L FP N           G  + 
Sbjct: 204 HSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRKPHLLFPTNSSSHL--VALQGQPLV 261

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           LEC+A G+P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   + 
Sbjct: 262 LECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVGEEDDGEYRCLAENSLGSD 321

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPL 536
             +  ++++A P + +     H+    +     C+  G P    +W  NG       +P+
Sbjct: 322 RHAYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPV 373

Query: 537 ED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           E+     +Y I    L +  L P    A  QC  +N+     ++A + V+ L P+    P
Sbjct: 374 EELGKDQKYRIHHGALVLSNLQPSDTVA--QCEPRNRHGLLLANAYIYVVEL-PAKILTP 430

Query: 594 LESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRD 651
            ++ETY A +G    + C    AP P   W  ++G  +    R   + NG L I  +  +
Sbjct: 431 -DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQAN 489

Query: 652 DSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
           D+G Y C A N    D+S   ++    +   +   Q P          +   C A  +  
Sbjct: 490 DTGHYFCQAAN----DQSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPS 545

Query: 709 LDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
           L  +  W     R   +DL EL ++    I+   L I +  ++D G Y CV  + +  + 
Sbjct: 546 LQHSTTW-----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVE 600

Query: 768 TKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTN 818
           ++  ++V G PG    +++ + H   ++   + W+    +  PI  Y I      +A   
Sbjct: 601 SQAELLVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEK 660

Query: 819 WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878
           W S         +GK         + S    L P+  Y F+V A N+ G GEPS  S   
Sbjct: 661 WYS---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETV 706

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSET 937
            TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +K    +Q + 
Sbjct: 707 VTPEAAPEKNPVDVKGEGNETNNMIITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQI 766

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + +       VV   S F    YE+KVQ +N  G GPE ++
Sbjct: 767 VSD----PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQI 801


>gi|390466861|ref|XP_003733663.1| PREDICTED: neuronal cell adhesion molecule [Callithrix jacchus]
          Length = 1304

 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 230/875 (26%), Positives = 360/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDALVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  QN G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASNKEELRGNVLLLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P + +   +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VITNRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM ++   L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NEELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPVPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVTAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 781 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG VQV  V+ T A + W      +  G  +  Y+I      NS   N     I K++  
Sbjct: 849 PGNVQVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 905

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
           + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS +     
Sbjct: 906 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLKIVNP 963

Query: 898 KIGDLSISWEP 908
            +  L++ W+P
Sbjct: 964 TLDSLTLEWDP 974


>gi|390466863|ref|XP_002751796.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Callithrix
           jacchus]
          Length = 1211

 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 230/875 (26%), Positives = 360/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDALVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  QN G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASNKEELRGNVLLLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P + +   +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VITNRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM ++   L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NEELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPVPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVTAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 781 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
           PG VQV  V+ T A + W      +  G  +  Y+I      NS   N     I K++  
Sbjct: 849 PGNVQVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 905

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
           + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS +     
Sbjct: 906 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLKIVNP 963

Query: 898 KIGDLSISWEP 908
            +  L++ W+P
Sbjct: 964 TLDSLTLEWDP 974


>gi|341891741|gb|EGT47676.1| hypothetical protein CAEBREN_11960 [Caenorhabditis brenneri]
          Length = 1186

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 210/815 (25%), Positives = 346/815 (42%), Gaps = 67/815 (8%)

Query: 190 PYFIKQPTDVV-FDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           P  ++Q  + V + L    + N +TL C A    +  Y W K+    D    +  D L +
Sbjct: 25  PKLLEQSEEEVWYHLDDDDLKNRLTLRCEADENTD-RYTWLKDGEPFD---IDSEDVLWE 80

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
           K      G ++   P     +G Y C ASN FG+ +S  + L  G +  F  KR  +I  
Sbjct: 81  KE--TQSGTIVFAKP-HASHQGYYQCFASNIFGTALSNKMHLRLGSLEHFP-KRDIQILR 136

Query: 309 QNWGKAMF--CDPPTNYPGVNYYWA-RDYFPNFVEE---DKRVFVSYDGALYFSALEQID 362
              G+++   C PP   P     W  R    + V E    + + V  +G L+FS++E  D
Sbjct: 137 VKEGESLTLNCTPPRGTPPPRIIWLYRSLDDSSVIETIKSRHITVDINGKLHFSSVELSD 196

Query: 363 AGN---YSCNVQSKV-SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPE--APKAGDK 416
                 Y C   S V     R+G    L + P    Q+   P       P     +AG +
Sbjct: 197 GKATLVYECAATSPVLRGEYRSGDRIQLDIEPT---QEKSHPVKKLSVSPSEVTVRAGSQ 253

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFE------NFNRILTIPNVKVEDQGEYICRA 470
           ++L+C+  G P+P+  W++    LP++   +      +F R L + NV  +D G Y CR 
Sbjct: 254 LKLQCIFGGRPLPTIFWSKVDGELPKSRLKDLTSSESDFGRSLIVENVHPDDAGVYECRG 313

Query: 471 SNDRSALESSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
            +    L  +V + + A P +   P  D  +  +      C A G P    +W  NG+ L
Sbjct: 314 RH----LVHTVNVRVMAAPFWEFDPPRDISLPEENTGELECLAGGQPTPIITWSMNGKFL 369

Query: 530 NSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           +      ED  R  +    +L +R LN + D  +YQC A N L   +++A + V    P 
Sbjct: 370 HELA---EDSRRVLLDHGRILRVRSLNHDLDTGVYQCNASNPLGYVFANAFVHVRAHAPF 426

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLIS 646
           F+  P            V + C+ +AAP+    W    D  +    G+ K+F N   +I 
Sbjct: 427 FRM-PAARHWKVVLHSTVILDCDVDAAPEAVVRWVDADDRPLQVVEGKNKLFPNHTFMIY 485

Query: 647 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP--PKITIAAHRNLQLRCSAH 704
            V+  D G+Y C  +N +G++ +  RL V   P+Y+ ++P   ++ + A    ++ C A 
Sbjct: 486 DVNSADEGLYYCNVSNKYGINRATNRLQVFK-PTYFVRIPTPKRLVLEAGETAEVFCEAV 544

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 764
            +  L + Y WT NG  +        E+    I    L   +     +G  +C   + V 
Sbjct: 545 ADPRLPIKYQWTINGKVLT-------ESQYYEILPDRLRFRSVRGRHSGIIDCAAITDVD 597

Query: 765 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
                  +IV+  P  P  V+     +  A I+W   + +G  I  Y +   T++    +
Sbjct: 598 VKLASMQLIVKDVPAHPV-VEAAHCSERKANIKWVAASDHGDSIKKYIVEMFTDFKKNEW 656

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY------GEPSSPSPQY 878
            V    I +EV+    ++   ++  L PW  Y F+V+A N  G       G+P       
Sbjct: 657 EV----INEEVN--VNKENFEVDITLTPWVNYTFRVVAVNSHGRSDMKIDGQPKEDWLTC 710

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 938
            T    PY  P+ + G G +  +L ISW+PL R   NAPN+ Y + ++        +E L
Sbjct: 711 QTRPSFPYTNPTGVKGEGTEPDNLVISWKPLDRYYWNAPNMQYLVRYKLDEPIHGWTEFL 770

Query: 939 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            E       ++R    F   +Y ++VQ++N VGP 
Sbjct: 771 VEDSLANYTIIRDQPTF--RKYLIQVQSVNSVGPS 803


>gi|332237970|ref|XP_003268177.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Nomascus
           leucogenys]
          Length = 1211

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 227/875 (25%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIVHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 835



 Score = 39.7 bits (91), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|332237972|ref|XP_003268178.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Nomascus
           leucogenys]
          Length = 1304

 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 227/875 (25%), Positives = 362/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIVHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 835


>gi|410952028|ref|XP_003982691.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Felis catus]
          Length = 1212

 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 230/877 (26%), Positives = 361/877 (41%), Gaps = 112/877 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV   + P S        G L IN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++   I  +N G+++          
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQSLVLPCRPPLGL 173

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFP--------HSNFQQLKF----PN-NFPKTF--PEAPKA------GDKVRLEC 421
              +KV           +N    +F    PN   P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYSAKPNRERPPTFLTPEGNTSNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP N  ++ NF + L I  V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPVIYWIKEDGTLPTNRTFYRNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           ++++++A P + +   +  +    D +  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVTVKAAPYWILAPQNLVLSPGEDGSLICRANGNPKPRISWLSNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P        +  Y
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS--ANTLY 464

Query: 600 AGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGI 655
                   +  C    +P P   W K     GS  R  I+   ENG L I    +D +G 
Sbjct: 465 QVIANRPALLDCAFFGSPLPTIEWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGT 522

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  GM +++  L +   P+   + P    +     +   C    +  L +   W
Sbjct: 523 YTCVARNKLGMAKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITW 581

Query: 716 THNGVRIGNMDLNELETPN-INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
                     D  EL +     +D   LE+ +   +D G Y CV  +T+  +S    + V
Sbjct: 582 LK--------DNGELPSDGRFTVDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSV 633

Query: 775 EGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST-- 822
             P          P  P  +++ +    S  + WT G  N  PIT + I      +    
Sbjct: 634 VAPTPTPAPIYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGL 693

Query: 823 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
           W + +E              + + +  L P+  Y F+V+A N LG   PS PS QY T A
Sbjct: 694 WHHQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKA 743

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEY 941
            +P   P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +   
Sbjct: 744 AEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV--- 800

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 801 ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835


>gi|410989685|ref|XP_004001089.1| PREDICTED: neural cell adhesion molecule L1 [Felis catus]
          Length = 1363

 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 205/832 (24%), Positives = 347/832 (41%), Gaps = 101/832 (12%)

Query: 199 VVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY---VQDRLVANLIDPLSDKRF 251
           V+ + S R ++    +DI+L C A G P   + W ++      ++     +        F
Sbjct: 131 VITEQSPRRLVVFPTDDISLKCEASGRPEVQFRWTRDGVHFKPKEEAGVTVHQAPHSGSF 190

Query: 252 TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNW 311
           T++G N       Q    G+Y C ASNK G+ +S  +QL      ++  +    +  +  
Sbjct: 191 TIAGNNSNFAQRFQ----GTYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVEEG 246

Query: 312 GKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
              +  C PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y C+
Sbjct: 247 ESVILPCHPPPSAEPLRIYWMNSKILH-IKQDERVTMGQNGNLYFANVLTSDNHSDYICH 305

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425
                + T        L+V   ++      +L FP N           G  + LEC+A G
Sbjct: 306 AHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHL--VALQGQPLVLECIAEG 363

Query: 426 YPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484
           +P P+  W R   P+P +   ++N N+ L + NV  ED GEY C A N   +   +  ++
Sbjct: 364 FPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYRCLAENSLGSDRHTYYVT 423

Query: 485 IQAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLED---QD 540
           ++A P + +     H+    +     C+  G P    +W  NG       +P+E+     
Sbjct: 424 VEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRING-------IPVEELAKDQ 475

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY- 599
           +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L P+    P ++ETY 
Sbjct: 476 KYRIQRGALILSNMQPS-DTMVTQCEARNRHGLLLANAYIYVVQL-PAKILTP-DNETYM 532

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
           A EG    + C    AP P   W  K+G  +    R   + NG L I  +  +D+G Y C
Sbjct: 533 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFC 592

Query: 659 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
            A N      +    + K    +  GP S  E+   K+T          C A  +  L  
Sbjct: 593 QAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFT--------CQASFDPSLQH 644

Query: 712 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
           +  W  +G  +     ++       I+ GLL I +  ++D G Y CV  + +  + ++  
Sbjct: 645 SITWRGDGRNLQESGDDD----KYFIEDGLLVIHSLDYSDQGNYSCVAGTELDIVESRAE 700

Query: 772 VIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNST 822
           ++V G PG    +++ + H   ++   + W     +  PI  Y I      +A   W S 
Sbjct: 701 LLVVGSPGPVPQLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYS- 759

Query: 823 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
                   +GK     T     S    L P+  Y F+V A N+ G GEPS  S    TP 
Sbjct: 760 --------LGKVPGNQT-----STTLKLSPYVHYTFRVTAINKYGSGEPSPASETVVTPE 806

Query: 883 DK----------------PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 926
                             P + P  + G G +  ++ I+W+PL     NAP + Y++ WR
Sbjct: 807 AASAGAHGFDVLTHYFPAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWR 866

Query: 927 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            +       E +     V    + + +   +  YE+KVQA+N  G GPE ++
Sbjct: 867 PQGTRGAWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQI 913


>gi|426227605|ref|XP_004007908.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Ovis aries]
          Length = 1256

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 226/849 (26%), Positives = 352/849 (41%), Gaps = 105/849 (12%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV   + P S        G L IN   + +     G Y C A N+ G+ IS ++ + 
Sbjct: 85  KDPLVT--MKPGS--------GTLTINIMSEGKAETYEGVYQCTARNERGAAISNNIVIR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  +N G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLRN-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  P+   +      G+ + LEC+A G P P   W +    LP N  ++
Sbjct: 253 GAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
            NF + L I  V   D G Y C A N   A+  +++++++A P + I   +  +  + D 
Sbjct: 313 RNFKKTLQIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKAAPYWIIAPQNLVLSPEEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566
           T  C A G P    SW  NG  +  E  P +D  R    D ++  +    ER  A+YQC 
Sbjct: 373 TLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAVYQCN 427

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWK 623
           A N+     ++A + VL   P    R L S    Y        +  C    +P P   W 
Sbjct: 428 ASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPAIEWF 483

Query: 624 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
           KD    GS  R  I+   ENG L I    +D +G Y+C A N  GM ++   L +   P+
Sbjct: 484 KDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 540

Query: 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG 739
              + P    +     +   C    +  L     W          D  EL +     +D 
Sbjct: 541 RIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------DHGELPSDGRFTVDK 592

Query: 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 789
             L + + +  D G Y CV  +T+  +S    + V  P          P  P  +++ + 
Sbjct: 593 DYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQ 652

Query: 790 HKTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIE 847
              S  + WT G  N  PIT + I      +    W + +E V G +          + +
Sbjct: 653 LDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGTQT---------TAQ 702

Query: 848 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
             L P+  Y F+V+A N LG   PS  S QY T A +P + P+ + G G +  +L I+W+
Sbjct: 703 LKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWK 762

Query: 908 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           PL   + N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA
Sbjct: 763 PLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 817

Query: 967 INDVGPGPE 975
           +ND G  PE
Sbjct: 818 LNDAGFAPE 826



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V V  V+ T A + W         G   G  I ++K  +    N          I K
Sbjct: 843 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 895

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 896 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 953

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ WEP
Sbjct: 954 IVNPTLDSLTLEWEP 968


>gi|221042958|dbj|BAH13156.1| unnamed protein product [Homo sapiens]
          Length = 1153

 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 226/875 (25%), Positives = 361/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +    ++  + P    +     +   C    +  L +  +W 
Sbjct: 524 TCVARNKLGMAKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 696 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 835



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974


>gi|426227609|ref|XP_004007910.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Ovis aries]
          Length = 1211

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 232/878 (26%), Positives = 362/878 (41%), Gaps = 111/878 (12%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
           G  PL LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +  
Sbjct: 15  GRAPLMLFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-- 62

Query: 208 ILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN-- 261
              +I + C A G P PS+ W +     D  +D LV   + P S        G L IN  
Sbjct: 63  ---NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIM 109

Query: 262 -DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CD 318
            + +     G Y C A N+ G+ IS ++ +       +  ++   I  +N G+++   C 
Sbjct: 110 SEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRN-GQSLVLPCR 168

Query: 319 PPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDT 377
           PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T
Sbjct: 169 PPIGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQT 227

Query: 378 GRNGPFFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDK 416
            +      +KV                + F   K     P TF  P+   +      G+ 
Sbjct: 228 IQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLTPDGNTSRKEELRGNV 287

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRS 475
           + LEC+A G P P   W +    LP N  ++ NF + L I  V   D G Y C A N   
Sbjct: 288 LSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKTLQIVQVTEADSGNYQCIAKNSLG 347

Query: 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           A+  +++++++A P + I   +  +  + D T  C A G P    SW  NG  +  E  P
Sbjct: 348 AIHHTISVTVKAAPYWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPI--EIAP 405

Query: 536 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
            +D  R    D ++  +    ER  A+YQC A N+     ++A + VL   P        
Sbjct: 406 -DDPSRKIDGDTIIFSKVQ--ERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTS--A 460

Query: 596 SETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRD 651
           +  Y        +  C    +P P   W KD    GS  R  I+   ENG L I    +D
Sbjct: 461 NTLYQVIANRPALLDCAFFGSPLPAIEWFKDAK--GSALREDIYVLHENGTLEIPVAQKD 518

Query: 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
            +G Y+C A N  GM ++   L +   P+   + P    +     +   C    +  L  
Sbjct: 519 STGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIP 577

Query: 712 AYIWTHNGVRIGNMDLNELETPN-INIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
              W          D  EL +     +D   L + + +  D G Y CV  +T+  +S   
Sbjct: 578 TVTWLK--------DHGELPSDGRFTVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASA 629

Query: 771 TVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
            + V  P          P  P  +++ +    S  + WT G  N  PIT + I      +
Sbjct: 630 VLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMH 689

Query: 821 --STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878
               W + +E V G +          + +  L P+  Y F+V+A N LG   PS  S QY
Sbjct: 690 EPGLWHHQAE-VPGTQT---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQY 739

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSET 937
            T A +P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  
Sbjct: 740 LTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVV 799

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           +    NV   +V     F    Y +KVQA+ND G  PE
Sbjct: 800 V---ANVSKYIVSGTPTF--VPYLIKVQALNDAGFAPE 832



 Score = 40.4 bits (93), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V V  V+ T A + W         G   G  I ++K  +    N          I K
Sbjct: 849 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ WEP
Sbjct: 960 IVNPTLDSLTLEWEP 974


>gi|119603834|gb|EAW83428.1| neuronal cell adhesion molecule, isoform CRA_b [Homo sapiens]
          Length = 1305

 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 220/849 (25%), Positives = 351/849 (41%), Gaps = 99/849 (11%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ +S ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +    ++ 
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-TWI 542

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
            + P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 543 VKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKT 792
            + + S  D+G Y CV  +T+  +S    + V  P          P  P  +++ +    
Sbjct: 596 VVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDK 655

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVL 850
           S  + WT G  N  PIT + I      +    W + +E              + + +  L
Sbjct: 656 SVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQLKL 705

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P+  Y F+V+A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL 
Sbjct: 706 SPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLN 765

Query: 911 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
             + N P + YK+ WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+ND
Sbjct: 766 GFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALND 820

Query: 970 VGPGPESEV 978
           +G  PE  V
Sbjct: 821 MGFAPEPAV 829


>gi|8569490|pdb|1CS6|A Chain A, N-terminal Fragment Of Axonin-1 From Chicken
          Length = 382

 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/406 (33%), Positives = 192/406 (47%), Gaps = 41/406 (10%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
           GP F +QP   +F   + S    +TL+C A   P  +Y W        ++    +    D
Sbjct: 4   GPVFEEQPAHTLF--PEGSAEEKVTLTCRARANPPATYRW--------KMNGTELKMGPD 53

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIG 307
            R+ L  G+L+I++P + +D GSY C A+N  G+++S    L FGF+ EF+ + R P   
Sbjct: 54  SRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKI 113

Query: 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNY 366
            + WG    C PP +YP ++Y W  + FPNF+  D R FVS   G LY +  E  D GNY
Sbjct: 114 TEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNY 173

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA----------GDK 416
           SC   S +        F    VF  S F QL       + +  + KA          G  
Sbjct: 174 SCFATSHID-------FITKSVF--SKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQM 224

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           V LEC AFG PVP   W +      + + + +   +L I NV  ED+G Y C A N +  
Sbjct: 225 VTLECFAFGNPVPQIKWRKLDGS--QTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGR 282

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
                 I I A+P++   +TD   D  +DL W+C A G P     W R+G+       PL
Sbjct: 283 DTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQ-------PL 335

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582
             Q+R  +    L    L  E D  MYQC A+N+  T Y+SA+L V
Sbjct: 336 ASQNRIEVSGGELRFSKLVLE-DSGMYQCVAENKHGTVYASAELTV 380



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 150/394 (38%), Gaps = 51/394 (12%)

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNVKVEDQ 463
           FPE   A +KV L C A   P  +Y W   G+ L   P + Y      ++    VK +D 
Sbjct: 16  FPEG-SAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDA 74

Query: 464 GEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV-------- 515
           G Y C A+N R  +       +  E +       +    + D     E +GV        
Sbjct: 75  GSYQCVATNARGTV-------VSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPP 127

Query: 516 --PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLK 572
             P ++Y W     LLN     +    R F+      +     E  D   Y C A + + 
Sbjct: 128 HYPALSYRW-----LLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHID 182

Query: 573 --TRYSSAQLRVLTLK--------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 622
             T+   ++   L+L         PS K +   ++TYA  G  VT+ C     P P+  W
Sbjct: 183 FITKSVFSKFSQLSLAAEDARQYAPSIKAK-FPADTYALTGQMVTLECFAFGNPVPQIKW 241

Query: 623 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +K   + GS   + +     L I  V  +D G Y C A N+ G D  +GR+I+   P + 
Sbjct: 242 RK---LDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWL 298

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
           + +       A     LR S         A  W  +G  + + +        I + GG L
Sbjct: 299 DVI---TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQN-------RIEVSGGEL 348

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
             +     D+G Y+CV ++  G +     + V+ 
Sbjct: 349 RFSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 382



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 107/282 (37%), Gaps = 43/282 (15%)

Query: 221 YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSYHCKASNK 279
           YP  SY W   ++       N I P   +RF + + GNL I    +  D G+Y C A++ 
Sbjct: 129 YPALSYRWLLNEF------PNFI-PADGRRFVSQTTGNLYIAK-TEASDLGNYSCFATSH 180

Query: 280 FG----SIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF 335
                 S+ S+  QL+     E   + AP I      KA F        G         F
Sbjct: 181 IDFITKSVFSKFSQLSLA--AEDARQYAPSI------KAKFPADTYALTGQMVTLECFAF 232

Query: 336 PNFVEEDK---------RVFVSYDGALYFSALEQIDAGNYSCNVQS-KVSDTGRNGPFFP 385
            N V + K           ++S +  L+   ++  D G Y C  ++ K  DT      + 
Sbjct: 233 GNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDT------YQ 286

Query: 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY 445
            ++  H+       P+            G  +R  CVA G P P+  W R G PL     
Sbjct: 287 GRIIIHAQ------PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNR 340

Query: 446 FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
            E     L    + +ED G Y C A N    + +S  +++QA
Sbjct: 341 IEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 382


>gi|432960260|ref|XP_004086435.1| PREDICTED: neural cell adhesion molecule L1.1-like [Oryzias
           latipes]
          Length = 1149

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 175/674 (25%), Positives = 285/674 (42%), Gaps = 67/674 (9%)

Query: 314 AMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQS 372
            + C+PP +   +  +W  D+    + +  RV    DG LYFS L   D+  +Y CN Q 
Sbjct: 39  VLTCNPPQSSSPLKIHWM-DFTMVHINQSDRVMTGLDGNLYFSNLLSSDSRDDYICNAQY 97

Query: 373 KVSDTGRNGPFFPLKVFPHSNFQQLKFPNNF-PKTFPEAPKA--GDKVRLECVAFGYPVP 429
             + T        L V P ++    K    F P     +  A  GD V LEC+  G P P
Sbjct: 98  AAALTILTVTAVSLTVLPSNDVIYGKKTELFRPTGLHSSILALKGDSVTLECIPKGLPTP 157

Query: 430 SYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488
              W ++ G+    +   +N NR L   N+  ED GEY CRASN       + T++++A 
Sbjct: 158 IVEWRKKDGTLKDMSGRLKNHNRWLYFDNISQEDDGEYECRASNSLGFATHTFTVTVEAA 217

Query: 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
           P +     +        +   C A G+P  + +W  NG+ L      ++D  R  I  + 
Sbjct: 218 PYWVKEPQNLMYAPGETVRLDCLADGIPTPSITWSMNGQALAE----VDDDPRRSITSSS 273

Query: 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY---AGEGGN 605
           L +R +    D A+YQC A N+  +   +  L V+ L P      L S+       EG +
Sbjct: 274 LILRDVEVS-DTAVYQCEATNRHGSILLNTNLFVVELPPQI----LSSDGVIYRVIEGSD 328

Query: 606 VTIFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
           V + C    +P+P   W ++  + +    R  +F NG + +S VS +D G Y+C+   V 
Sbjct: 329 VNLHCESFGSPRPHTTWTREDMVPLLVDPRASLFTNGTIQLSSVSHEDGGTYTCS---VK 385

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIG 723
             + S    + +   +   + P  I +       L C  + +  L   Y+ W  +GV + 
Sbjct: 386 FSNISISANLEVFNQTTISEGPKDIRVLEGTTALLACDFYKDPRLQDFYVKWKRDGVELQ 445

Query: 724 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
               ++  T   N   G LE+T     D+  Y C V + +   + K            G 
Sbjct: 446 GSLPDDKYTIFTN---GTLEMTKVHLNDSAHYSCEVSTVLDHATAK------------GS 490

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           + V+E     A  +   G   G                         I K  +R +G  +
Sbjct: 491 ITVIEF-IVEAEEKLHTGEGKG-------------------------IWKTWERISG-NQ 523

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
             ++  L P+ TY F++IA NE G   PS P+  + TP   P + P+ +       G LS
Sbjct: 524 TQVQLTLRPFCTYRFRIIAVNEAGESSPSEPTEDHVTPPAAPDKNPTDVSSNSRDSGTLS 583

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           I+W  + +   N  N +Y++FWR+      +++T  ++ +V      + +   Y  +E+K
Sbjct: 584 ITWTKVEKRFHNGDNFHYRVFWREAEGA--RTDTNWKHADVTSPPFLVGNTSTYKRFEIK 641

Query: 964 VQAINDVGPGPESE 977
           VQAIN +G GPE E
Sbjct: 642 VQAINSIGKGPEPE 655



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 60/319 (18%)

Query: 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDP 245
           +   PY++K+P ++++   +      + L C A G P PS  W     +  + +A + D 
Sbjct: 214 VEAAPYWVKEPQNLMYAPGET-----VRLDCLADGIPTPSITW----SMNGQALAEVDD- 263

Query: 246 LSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISES----VQLAFGFIGEFN-L 300
             D R +++  +LI+ D  +V D   Y C+A+N+ GSI+  +    V+L    +     +
Sbjct: 264 --DPRRSITSSSLILRD-VEVSDTAVYQCEATNRHGSILLNTNLFVVELPPQILSSDGVI 320

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR-DYFPNFVEEDKRVFVSYDGALYFSALE 359
            R  E  + N    + C+     P  +  W R D  P  V  D R  +  +G +  S++ 
Sbjct: 321 YRVIEGSDVN----LHCE-SFGSPRPHTTWTREDMVPLLV--DPRASLFTNGTIQLSSVS 373

Query: 360 QIDAGNYSCNVQ-SKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-----A 413
             D G Y+C+V+ S +S +        L+VF  +             T  E PK      
Sbjct: 374 HEDGGTYTCSVKFSNISISAN------LEVFNQT-------------TISEGPKDIRVLE 414

Query: 414 GDKVRLECVAFGYPVPS---YNWTRRG----SPLPRNAYFENFNRILTIPNVKVEDQGEY 466
           G    L C  +  P        W R G      LP + Y    N  L +  V + D   Y
Sbjct: 415 GTTALLACDFYKDPRLQDFYVKWKRDGVELQGSLPDDKYTIFTNGTLEMTKVHLNDSAHY 474

Query: 467 ICRASN--DRSALESSVTI 483
            C  S   D +  + S+T+
Sbjct: 475 SCEVSTVLDHATAKGSITV 493


>gi|2511666|emb|CAA04507.1| NrCAM protein [Homo sapiens]
          Length = 1299

 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 227/875 (25%), Positives = 361/875 (41%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 15  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 59

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 60  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 109

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 110 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 168

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 169 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 227

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 228 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 287

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 288 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 347

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 348 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 404

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 405 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 460

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 461 VIANRPALLDCAFFGSPLPTIQWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 518

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P++  + P    +     +   C    +  L +  +W 
Sbjct: 519 TCVARNKLGMAKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWL 577

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 578 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 630

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPIT--HYKIIARTNWNSTWF 824
           P          P  P  +++ +    S  + WT G  N  PIT  H +     +    W 
Sbjct: 631 PTPTPAPVYDVPNPPLDLELTDQLDKSVQLSWTPGDDNNSPITTIHDEYEDAMHKPGLWH 690

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 691 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 740

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K  D E+ S  +    N
Sbjct: 741 PDKNPTAVEGLGSEPDNLVITWKPLNGFEFNGPGLQYKVSWRQKVGDDEWTSVVV---AN 797

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 798 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 830


>gi|353229965|emb|CCD76136.1| septate junction protein [Schistosoma mansoni]
          Length = 1354

 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 205/740 (27%), Positives = 328/740 (44%), Gaps = 63/740 (8%)

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKA--MFCDPPTNYPGVNYY 329
           Y C A N+FG+ +S  V +    +G+F L +  ++   + G++  + C  P  YP     
Sbjct: 2   YQCIAKNQFGTALSVIVNVKRAELGDFELTKEQKV-RASLGQSVRLACQVPVGYPPPVVT 60

Query: 330 WA--RDYFPNFVEEDKRVFVSYDGALYF-SALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
           W   ++   ++++E  R     +G LY  + + + D   Y+C   ++V    ++GP F L
Sbjct: 61  WQTEKNAQIHYLKETNRRATDINGYLYIATVIPEDDDTLYTCVANNEVLRIQKSGPSFRL 120

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS---PLPRN 443
            V    +   +K     P+T  E    GD V+L C+  GYP P Y W +  S    LP N
Sbjct: 121 SVHGQQSTYPVKTDYRSPRT--EDAAVGDIVQLRCIYSGYPEPQYTWFKDESEKITLP-N 177

Query: 444 AYFENFNRILTIPNVKVEDQGEYICRASND--RSALESSVTISIQAEPNFTIPLTDKHMD 501
              +N   +L I  V +E  GEY C+  N+  ++ + S  T+ ++  P F     D  + 
Sbjct: 178 VKIKNMGTMLEINPVTIESAGEYRCQGINEVTKNTVNSQFTVFVRVRPKFIEKPEDITVP 237

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
               +T+ C A G P     W  NGE  +S      D  R  +  N + +  L   +D A
Sbjct: 238 VNGSVTFRCTASGDPPPKIRWTINGEDPSSYL----DGVRKVLHGNTMQLSNLT-IKDSA 292

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           + QC A N+    +++A + V+   P F K P ES   A +G  VT+FC   +APK    
Sbjct: 293 VIQCNASNKFGYAFTNAYVNVMREAPYFMKPP-ESVVRAVDGNQVTLFCQTFSAPKAIIS 351

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           W KD   I +GGR KI  +G+L I  V+  DSG+Y CTATN  G  ++ G+L+V    + 
Sbjct: 352 WTKDRRPI-NGGRYKILTSGDLFIESVAITDSGVYECTATNPFGSKKASGKLLVRRK-TR 409

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTE--ELLDVAYIWTHNGVRIGNMDLNELETPNIN--- 736
               P    +  +  ++  C+A T+  E+ ++   W  +   I   D N   TP I    
Sbjct: 410 IVLAPINTRVYENDVVKFVCTAETDPAEVSNLKITWYKDDNYI---DPN--LTPRIQQVW 464

Query: 737 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV--VE-VHKTS 793
            D  L+ ++ A   D G+Y C   + +   +    ++V+G P     VQV  V+ +++  
Sbjct: 465 FDYALV-LSGAQPRDTGQYRCNASNGLDFDTATAPLLVQGRPEQAINVQVNCVDFINEEL 523

Query: 794 ATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGR-KEASIENVLV 851
           A I W  G+ N  PI  Y +   T +   TW+         E+   TG  +  S++ VL 
Sbjct: 524 ALITWYPGSDNYAPIMEYIVEYSTQFERDTWY-------PAEIFNLTGLVQSTSVKVVLR 576

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
           P   Y+F+V   N +G   PS P+ +    P   P   P  +   G    +L I W  LP
Sbjct: 577 PNIQYQFRVRTRNRVGVSLPSQPTTKTCGIPGRVPSVNPRELYVFGTIGNNLVIRWTTLP 636

Query: 911 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYG--------------NVGIAVVRIPSEFY 956
             + N  N+ Y +  +  N    QS  +                    G+ V  I S   
Sbjct: 637 FIEHNGNNLGYILTVQCLNCASVQSNAINTTVIGDWRTDRIVYTSFKAGVVVSEIES--- 693

Query: 957 YTEYEVKVQAINDVGPGPES 976
           Y  + V +Q+ N+ G   +S
Sbjct: 694 YKLFRVTIQSRNEKGVSTQS 713



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 154/381 (40%), Gaps = 38/381 (9%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           + L C   GYP P Y WFK++   +++       L + +    G  L IN P  +E  G 
Sbjct: 149 VQLRCIYSGYPEPQYTWFKDE--SEKIT------LPNVKIKNMGTMLEIN-PVTIESAGE 199

Query: 272 YHCKA-----SNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
           Y C+       N   S  +  V++   FI +      P  G+  +      DPP   P +
Sbjct: 200 YRCQGINEVTKNTVNSQFTVFVRVRPKFIEKPEDITVPVNGSVTFRCTASGDPP---PKI 256

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
            +    +   ++++  ++V   +   +  S L   D+    CN  +K      N     +
Sbjct: 257 RWTINGEDPSSYLDGVRKVL--HGNTMQLSNLTIKDSAVIQCNASNKFGYAFTNAYVNVM 314

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446
           +  P+     +K P +  +        G++V L C  F  P    +WT+   P+    Y 
Sbjct: 315 REAPYF----MKPPESVVRAV-----DGNQVTLFCQTFSAPKAIISWTKDRRPINGGRYK 365

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI-PLTDKHMDNQAD 505
              +  L I +V + D G Y C A+N   + ++S  + ++ +    + P+  +  +N   
Sbjct: 366 ILTSGDLFIESVAITDSGVYECTATNPFGSKKASGKLLVRRKTRIVLAPINTRVYENDV- 424

Query: 506 LTWTCEA----FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
           + + C A      V ++  +W+++   ++    P   Q  +F  D  L +    P RD  
Sbjct: 425 VKFVCTAETDPAEVSNLKITWYKDDNYIDPNLTP-RIQQVWF--DYALVLSGAQP-RDTG 480

Query: 562 MYQCRAKNQLKTRYSSAQLRV 582
            Y+C A N L    ++A L V
Sbjct: 481 QYRCNASNGLDFDTATAPLLV 501



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 100/244 (40%), Gaps = 46/244 (18%)

Query: 562 MYQCRAKNQLKTRYS------SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEA 614
           MYQC AKNQ  T  S       A+L    L    K R       A  G +V + C  P  
Sbjct: 1   MYQCIAKNQFGTALSVIVNVKRAELGDFELTKEQKVR-------ASLGQSVRLACQVPVG 53

Query: 615 APKPKFVWKKDGNI----IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTATNVHGMDES 669
            P P   W+ + N     +    RR    NG L I+ V   DD  +Y+C A N     + 
Sbjct: 54  YPPPVVTWQTEKNAQIHYLKETNRRATDINGYLYIATVIPEDDDTLYTCVANNEVLRIQK 113

Query: 670 KG---RLIVLHG-----PSYYEQLPPKITIAAHRNL-QLRC--SAHTEELLDVAYIWTHN 718
            G   RL V HG     P   +   P+   AA  ++ QLRC  S + E      Y W  +
Sbjct: 114 SGPSFRLSV-HGQQSTYPVKTDYRSPRTEDAAVGDIVQLRCIYSGYPEP----QYTWFKD 168

Query: 719 GVRIGNMDLNELETPNINID--GGLLEITNASFADAGEYEC--VVKSTVGKISTKTTVIV 774
                  +  ++  PN+ I   G +LEI   +   AGEY C  + + T   ++++ TV V
Sbjct: 169 -------ESEKITLPNVKIKNMGTMLEINPVTIESAGEYRCQGINEVTKNTVNSQFTVFV 221

Query: 775 EGPP 778
              P
Sbjct: 222 RVRP 225


>gi|149029901|gb|EDL85013.1| rCG43874 [Rattus norvegicus]
          Length = 1133

 Score =  205 bits (522), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 176/678 (25%), Positives = 295/678 (43%), Gaps = 49/678 (7%)

Query: 317 CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVS 375
           C+PP +   +  YW      + +++D+RV +  +G LYF+  L   +  +Y CN     +
Sbjct: 35  CNPPPSAAPLRIYWMNSKILH-IKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGT 93

Query: 376 DTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSY 431
            T        L+V P ++      +L FP N           G  + LEC+A G+P P+ 
Sbjct: 94  RTIIQKEPIDLRVKPTNSMIDRKPRLLFPTNSSSHL--VALQGQSLILECIAEGFPTPTI 151

Query: 432 NWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 490
            W     P+P +   ++N N+ L + NV  ED GEY C A N   +   +  ++++A P 
Sbjct: 152 KWLHPSDPMPTDRVIYQNHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP- 210

Query: 491 FTIPLTDKHMDNQADLT-WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVL 549
           + +     H+    +     C+  G P    +W  NG  +      +    +Y I+   L
Sbjct: 211 YWLQKPQSHLYGPGETARLDCQVQGRPQPEVTWRINGMSIEK----VNKDQKYRIEQGSL 266

Query: 550 TIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTI 608
            +  + P  D  + QC A+NQ     ++A + V+ L      +  +++TY A EG    +
Sbjct: 267 ILSNVQPS-DTMVTQCEARNQHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYL 323

Query: 609 FCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
            C    AP P   W  ++G  +    R   + NG L I  +  +D+G Y C A N     
Sbjct: 324 LCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNV 383

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 726
                L V       +   P+ TI      +   C A  +  L  +  W  +G      D
Sbjct: 384 TILANLQVKEATQITQG--PRSTIEKKGARVTFTCQASFDPSLQASITWRGDG-----RD 436

Query: 727 LNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 785
           L E  ++    I+ G L I +  ++D G Y CV  + + ++ ++  ++V G PG    ++
Sbjct: 437 LQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLE 496

Query: 786 VVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTG 840
           + + H   ++   + W+    +  PI  Y I       +   WF++ + V G +      
Sbjct: 497 LSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT----- 550

Query: 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
               S    L P+  Y F+V A N+ G GEPS  S    TP   P + P  + G G +  
Sbjct: 551 ----STTLKLSPYVHYTFRVTAINKYGSGEPSPVSETVVTPEAAPEKNPVDVRGEGNETN 606

Query: 901 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           ++ I+W+PL     NAP I Y++ WR       + ET KE   V    + + +   +  Y
Sbjct: 607 NMVITWKPLRWMDWNAPQIQYRVQWRPLG----KQETWKEQ-TVSDPFLVVSNTSTFVPY 661

Query: 961 EVKVQAINDVGPGPESEV 978
           E+KVQA+N+ G GPE +V
Sbjct: 662 EIKVQAVNNQGKGPEPQV 679



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 29/173 (16%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKR-FTLSGGNLIINDPRQVEDRGSY 272
           L C A G P PS +W  E+             L D+R F  + G L I D  Q  D G Y
Sbjct: 323 LLCKAFGAPVPSVQWLDEEGT---------TVLQDERFFPYANGTLGIRD-LQANDTGRY 372

Query: 273 HCKASNKFGSI-------ISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
            C+A+N   ++       + E+ Q+  G       K A         +  F    +  P 
Sbjct: 373 FCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGA---------RVTFTCQASFDPS 423

Query: 326 V--NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 376
           +  +  W  D        D   +   DG L   +L+  D GNYSC   +++ +
Sbjct: 424 LQASITWRGDGRDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDE 476


>gi|402859558|ref|XP_003894221.1| PREDICTED: contactin-4-like, partial [Papio anubis]
          Length = 622

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/391 (33%), Positives = 195/391 (49%), Gaps = 9/391 (2%)

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 644
           + P F +  L+  T    GG V I C P+A+PKP + WKK  +I+    R  + E+GNL 
Sbjct: 1   VGPDFSRTLLKRITLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITVSEDGNLR 60

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I  V++ D+G Y+C ATN  G   S G L+V   P+     P  + +    ++ L C   
Sbjct: 61  IINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVT 119

Query: 705 TEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
            +  LD+ + W+ NG  I  + D +  E    +  G L+ I N     AG+Y C+V+++V
Sbjct: 120 HDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSV 178

Query: 764 GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 823
            ++S    +IV GPPG P  V + E+  T+A + W  G  N  PIT Y I ART ++  W
Sbjct: 179 DRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW 238

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
             V  + + + +D   G+   +    L PW  YEF+ +A N +G GEPS PS +  T   
Sbjct: 239 QAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEA 293

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 943
            P   P+ + GGGG   +L I+WE +P E QN     Y + +R      +    L    +
Sbjct: 294 LPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-AD 352

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
               V R  S   ++ +EVKV   N+ G GP
Sbjct: 353 ASRYVFRNESVRPFSPFEVKVGVFNNKGEGP 383



 Score = 46.2 bits (108), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 105/485 (21%), Positives = 171/485 (35%), Gaps = 43/485 (8%)

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 568
           C+    P   Y+W +  ++L       ++ +R  + ++   +R +N  + D   Y C A 
Sbjct: 26  CKPKASPKPVYTWKKGRDIL-------KENERITVSED-GNLRIINVTKSDAGSYTCIAT 77

Query: 569 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
           N   T  S+  L V+         P   +   GE   +      + +    F W  +G++
Sbjct: 78  NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 136

Query: 629 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           I        FE       G+L+I  +    +G Y C          +   LIV   P   
Sbjct: 137 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 196

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
           E +           L  R        + +  I       +G   +N +  P + IDG   
Sbjct: 197 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTF 253

Query: 743 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 795
             T        EYE   V  + +G     + S K       P   P  V      K+   
Sbjct: 254 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 313

Query: 796 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
           I W    +   NGR    Y +  R      W      +   +  RY  R E+     + P
Sbjct: 314 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRP 365

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           +S +E KV   N  G G P SP+    +  ++P + P+ I        D+ + W   P E
Sbjct: 366 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLE 423

Query: 913 KQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
           K       Y++ +WR + D E  +  ++  GN      +I +      Y + V+A N  G
Sbjct: 424 KNRGRIQGYEVKYWRHE-DKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAG 480

Query: 972 PGPES 976
            GP S
Sbjct: 481 TGPSS 485



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 29/210 (13%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQ 371
           G+ +    P   P   Y W +    + ++E++R+ VS DG L    + + DAG+Y+C   
Sbjct: 20  GEVVIECKPKASPKPVYTWKKGR--DILKENERITVSEDGNLRIINVTKSDAGSYTCIAT 77

Query: 372 SKVSDTGRNGPFF---PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC-VAFGYP 427
           +        G      P +V        +  P++   T       G+ + L C V   + 
Sbjct: 78  NHFGTASSTGNLVVKDPTRV--------MVPPSSMDVTV------GESIVLPCQVTHDHS 123

Query: 428 VP-SYNWTRRGSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALES 479
           +   + W+  G  +  +   ++F R+       L I N++++  G+Y+C        L +
Sbjct: 124 LDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSA 183

Query: 480 SVTISIQAEPNFTIPLT-DKHMDNQADLTW 508
           +  + ++  P     +T D+  D  A L+W
Sbjct: 184 AADLIVRGPPGPPEAVTIDEITDTTAQLSW 213



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 7/124 (5%)

Query: 412 KAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF---ENFNRILTIPNVKVEDQGEYIC 468
           K G +V +EC     P P Y W +    L  N      E+ N  L I NV   D G Y C
Sbjct: 17  KVGGEVVIECKPKASPKPVYTWKKGRDILKENERITVSEDGN--LRIINVTKSDAGSYTC 74

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF--GVPDVTYSWFRNG 526
            A+N      S+  + ++      +P +   +     +   C+       D+ ++W  NG
Sbjct: 75  IATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNG 134

Query: 527 ELLN 530
            L++
Sbjct: 135 HLID 138


>gi|296488521|tpg|DAA30634.1| TPA: neuronal cell adhesion molecule isoform 1 [Bos taurus]
          Length = 1302

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 231/878 (26%), Positives = 360/878 (41%), Gaps = 111/878 (12%)

Query: 149 GMEPL-LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRS 207
           G  PL LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +  
Sbjct: 15  GRAPLMLFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-- 62

Query: 208 ILNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN-- 261
              +I + C A G P+PS+ W +     D  +D LV   + P S        G L IN  
Sbjct: 63  ---NIVIQCEAKGKPSPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIM 109

Query: 262 -DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKR-APEIGNQNWGKAMFCDP 319
            + +     G Y C A N+ G+ IS ++ +       +  ++  P I        + C P
Sbjct: 110 SEGKAETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPIILRNGQSLVLPCRP 169

Query: 320 PTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTG 378
           P   P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T 
Sbjct: 170 PIGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTI 228

Query: 379 RNGPFFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKV 417
           +      +KV                + F   K     P TF  P+   +      G+ +
Sbjct: 229 QQKQPISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLTPDGNTSRKEELRGNVL 288

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W +    LP N  ++ NF + L I  V   D G Y C A N   A
Sbjct: 289 SLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKTLQIVQVTEADSGNYQCIAKNALGA 348

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  +++++++A P + I   +  +  + D T  C A G P    SW  NG  +  E  P 
Sbjct: 349 IHHTISVTVKAAPYWIIAPQNLVLSPEEDGTLICRANGNPKPRISWLSNGVPI--EIAP- 405

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           +D  R    D ++  +    ER  A+YQC A N+     ++A + VL   P    R L S
Sbjct: 406 DDPSRKIDGDTIIFSKVQ--ERSSAVYQCNASNEYGYLLANAFVNVLAEPP----RILTS 459

Query: 597 ET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSR 650
               Y        +  C    +P P   W K     GS  R  I+   ENG L I    +
Sbjct: 460 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQK 517

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           D +G Y+C A N  GM ++   L +   P+   + P    +     +   C    +  L 
Sbjct: 518 DSTGTYTCVARNKLGMAKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLI 576

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
              +W  +   + N            +D   L + + +  D G Y CV  +T+  +S   
Sbjct: 577 PTVMWLKDHGELPNDG-------RFTVDKDRLVVADVNDDDGGTYTCVANTTLDNVSASA 629

Query: 771 TVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
            + V  P          P  P  +++ +    S  + WT G  N  PIT + I      +
Sbjct: 630 VLSVVAPTPTPAPIYDVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMH 689

Query: 821 --STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878
               W + +E V G +          + +  L P+  Y F+V+A N LG   PS  S QY
Sbjct: 690 EPGLWHHQTE-VPGTQT---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQY 739

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSET 937
            T A +P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  
Sbjct: 740 LTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVV 799

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           +    NV   +V     F    Y +KVQA+ND G  PE
Sbjct: 800 V---ANVSKYIVSGTPTF--VPYLIKVQALNDAGFAPE 832



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  +    N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ WEP
Sbjct: 960 IVNPTLDSLTLEWEP 974


>gi|268054015|gb|ACY92494.1| contactin-like protein [Saccoglossus kowalevskii]
          Length = 564

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 184/337 (54%), Gaps = 20/337 (5%)

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVL--HGPSYYEQLPPKITIAAHRNLQLRCS 702
           I  V   D G Y+C A N  G D+S+GRL++   H  +   Q P  ++I    +  L+C 
Sbjct: 1   IQNVQDSDGGKYTCIARNYIGEDQSEGRLVIRDPHDGTVITQWPLAMSIEVGDDATLKCR 60

Query: 703 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 762
           A  + +LD+ YIW  +GV+I  +D    ++    +  G LEI +A    +G Y C   +T
Sbjct: 61  ATADPVLDLTYIWLLDGVQIDVLD----DSHYARLRDGNLEIIDAELRQSGVYTCTAHTT 116

Query: 763 VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 822
           + ++S    VI++G PG P GV+  ++   S  ++W++G +N  PI  Y + +RT     
Sbjct: 117 IDEVSKSAEVIIKGAPGPPAGVRASDITTNSCQLRWSEGFSNNDPIKTYTVQSRTKEEPE 176

Query: 823 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
           W           ++R      ++  N L PWS Y+F+V A N  G GEPS PSP+Y+T  
Sbjct: 177 WI----------IEREGIPDLSASLNSLSPWSNYQFRVSAVNSYGRGEPSLPSPEYSTHE 226

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 942
           DKPY  P  +GGGGGK GDL I+W+PL R+ QNAP + Y ++W+K N  E  S+ +    
Sbjct: 227 DKPYHEPRNVGGGGGKTGDLRITWDPLSRQDQNAPGLGYYVYWKKANSREEYSKGVVNDE 286

Query: 943 NVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGPESEV 978
            VG+  V+ +P+   Y +Y+V+V   N  G GP S +
Sbjct: 287 AVGVYTVKGVPT---YVQYDVRVGVFNAKGDGPNSTI 320


>gi|345305290|ref|XP_001513017.2| PREDICTED: protein sidekick-1 [Ornithorhynchus anatinus]
          Length = 2113

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 197/801 (24%), Positives = 322/801 (40%), Gaps = 65/801 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W   D       + +    S+
Sbjct: 33  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWLHND-------SEITSYSSE 81

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G+F      +  +
Sbjct: 82  YKYIIPS--------LQRFDNGFYQCVVRNRMGALLQRKSEVQVAYMGDFMAADQRKTVS 133

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
                 +      +YP     W RD   + +    RV ++ +  L   A    DAG Y  
Sbjct: 134 PGMAAVLNLLQIISYPKPQVTWFRD--GHKIIPSHRVAITLENQLVILATTTSDAGGYYV 191

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAFGYP 427
              ++ +   +  PF  L V   +N  +   P    P           ++ LEC+A   P
Sbjct: 192 QAVNEKNGENKTSPFIYLSVANENNASRPVAPVIVIPPCNTSVVAGSSEITLECIANARP 251

Query: 428 VP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS---VT 482
           V   S  W R G  +   +   +F R LTI N    D G YIC A    SA E++     
Sbjct: 252 VEELSVTWKRNGVKI--TSGIHSFGRRLTISNPTSSDIGMYICEAKLKDSAFETARAKAY 309

Query: 483 ISIQAEPNFTI-PLTD--KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
           +SI   P FT  P++     +D   DL   C+A GVP     W+++   ++     L++ 
Sbjct: 310 LSIIEPPYFTAEPMSRILTEVDKTVDLL--CQAMGVPVPNLEWYKDSVPISK----LQNP 363

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
               +    L I+ L+P+ D  ++QC A+N+     +   L    + P+F +RP  ++T 
Sbjct: 364 RYKLLMSGSLQIQKLHPD-DSGIFQCFARNEAGEIQTHTYLEATNIAPTFSQRP--ADTT 420

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGI 655
             +G    + C    APKP   WK+   I+ SG     R  + E+G L I+PV   D+G 
Sbjct: 421 VTDGMTAVLTCEVSGAPKPAITWKRGDQILASGSVQIPRFILLESGGLQIAPVFLHDAGN 480

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A N  G   +   L V +  S     P  I +       L C A  +  + + Y W
Sbjct: 481 YTCYAINAEGSLNANAMLTVWNRTSIVHP-PEDIVVIKGTTATLLCGATHDPRISIRYFW 539

Query: 716 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
             +G+ I +   + L    I+ DG LL I+     D G+Y C + S  G  S    + V 
Sbjct: 540 KKDGIIIKSAASSRLM---ISKDGSLL-ISQTWSGDIGDYTCEIVSVGGNDSKMARLEVI 595

Query: 776 GPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             P  P  +       H  +  + W        P+ +Y I+  +  NS W      V   
Sbjct: 596 ELPHSPQNLMASLNSSHSRTVILSWVRPFDGNSPLLYY-IVELSENNSPW-----KVHLS 649

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
            +D  T     +I + L P  TY+F+V A N++G G+ S  + +   P + P   P  I 
Sbjct: 650 NIDPKT--MSVTISD-LTPARTYQFRVCAVNQVGKGQYSMETSRLMLPEEPPSAPPKNIV 706

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 952
             G     + + W+P P  + N     Y + +R      E+Q   +    +  I    + 
Sbjct: 707 ASGRTNQSIMVQWQPPPETEHNGILHGYNLRYRLAGLPGEYQHRNIT---SPEINYCLVK 763

Query: 953 SEFYYTEYEVKVQAINDVGPG 973
               +T+YE++V A N  G G
Sbjct: 764 DLIIWTQYEIQVAAYNGAGLG 784



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 9/117 (7%)

Query: 773  IVEGPP-GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
            +  GP  G PG  Q + V K+++   +QWT+G +   P T + I A+ +    W      
Sbjct: 1790 VTAGPAEGSPGSPQDIFVSKSASDLILQWTEGNSGDTPTTGFIIEAKPSDEGLW-----D 1844

Query: 830  VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            +  K++ R       +++  L    +YEF+V+A NE GYGEPSSPS   +   + P+
Sbjct: 1845 MFVKDIPRSATSYTVALDK-LKQGVSYEFRVVAVNEFGYGEPSSPSAAVSAQLETPF 1900



 Score = 43.1 bits (100), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 14/143 (9%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            +V   S  +QW  G+    PI ++ +  R   +  W   S  +            EA++ 
Sbjct: 1419 KVSSRSLQLQWIPGSDGSSPIRYFTVQVRELPDGEWQTYSSSI----------SHEATVC 1468

Query: 848  NV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
             +  L P+++Y+ ++ A N++G  + S  +    T  D P + PS I         + I 
Sbjct: 1469 VIERLNPFTSYKLRLKATNDIGDSDFSVETEAVTTLQDVPGEPPSSISVTPHTTSSVLIQ 1528

Query: 906  WEPLPREKQ-NAPNIYYKIFWRK 927
            W+P PR+K  N   + Y+I++R+
Sbjct: 1529 WKP-PRDKSLNGLLVGYRIYYRE 1550



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 13/195 (6%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 836
            PG P  +   EV  TS  I W         I  Y+I  R   +S   F   E  +G  + 
Sbjct: 1308 PGPPVRLVFPEVKLTSVRIVWQPPEEPNGIILGYQIAYRLAASSPNTFTTVE--VGSTIR 1365

Query: 837  RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
            ++           L P S Y F+  A    G+GEP   +       ++P   PS +    
Sbjct: 1366 QFMATD-------LTPESAYIFRTSAKTRQGWGEPLEATVITTEKRERP-APPSELLIPQ 1417

Query: 897  GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
             K+   S+  + +P    ++P  Y+ +  R+  D E+Q+ +        + V+   + F 
Sbjct: 1418 SKVSSRSLQLQWIPGSDGSSPIRYFTVQVRELPDGEWQTYSSSISHEATVCVIERLNPF- 1476

Query: 957  YTEYEVKVQAINDVG 971
             T Y+++++A ND+G
Sbjct: 1477 -TSYKLRLKATNDIG 1490



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 24/247 (9%)

Query: 738  DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 792
            D  +LEI N +      +     + VG      S++    ++ PP + PG + V    +T
Sbjct: 1059 DAQMLEIPNLTPYTHYRFRMRQVNVVGPSPFSQSSRVIQTLQAPPDIAPGSITVRTASET 1118

Query: 793  SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            S  ++W    D   NG P +  Y++   RT+ +S+   V   VI   ++R     E +IE
Sbjct: 1119 SLWLRWVPLPDSQYNGNPESVGYRVKYWRTDLHSS---VLVQVINNRLER-----ECTIE 1170

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
             +    + YE ++ A N +G G P S + +  T    P  AP  +         + ++W 
Sbjct: 1171 ELEEW-TEYELQIQAFNAIGAG-PWSEALRGRTRESVPSAAPENVSVEAVSSTQILLTWA 1228

Query: 908  PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
             +P + QN   + YKI ++ K+ D+E Q+  ++  GN   +V+ +     Y  YE++V A
Sbjct: 1229 AVPEQDQNGLILGYKILYKAKDLDSEPQTYVVR--GNHTQSVL-LAGLRKYVLYEIQVLA 1285

Query: 967  INDVGPG 973
               +G G
Sbjct: 1286 FTRIGNG 1292


>gi|403287224|ref|XP_003934852.1| PREDICTED: protein sidekick-1 [Saimiri boliviensis boliviensis]
          Length = 2227

 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 199/801 (24%), Positives = 323/801 (40%), Gaps = 65/801 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W ++D       + L    S+
Sbjct: 117 APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMRDD-------SELTTYSSE 165

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 166 YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEVHVAYMGSFMDTDQRKTVS 217

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    D G Y  
Sbjct: 218 QGHAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTPSDTGAYYV 275

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYP 427
              ++ +   +  PF  L +       +   P         +  AG  +  LEC+A   P
Sbjct: 276 QAVNEKNGENKTSPFIHLSIARDIGTSETMAPTIVVPPGNRSVVAGSSETTLECIASARP 335

Query: 428 VP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVT 482
           V   S  W R G  +   +   +F R LTI N    D G Y+C A+  RSA E   +   
Sbjct: 336 VEELSVTWKRNGVRI--TSGLHSFGRRLTISNPTSADTGLYVCEAALRRSAFEPARAKAF 393

Query: 483 ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           + I   P FT  P +    + +  +   C A GVP  T  W++N   ++     L++   
Sbjct: 394 LFIIEPPYFTAEPESRISGEVEETVDIGCRAMGVPLPTLQWYKNAISISK----LQNPRY 449

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +    L I+ L+PE D  ++QC A N+     +   L V  + P F +RP  ++T   
Sbjct: 450 KVLASGGLRIQKLHPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRP--ADTTVT 506

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 657
           +G    + C    APKP   WK++  I+ SG     R  + E+G L I+PV   D+G Y+
Sbjct: 507 DGMTAILRCEVSGAPKPAITWKRENRILASGSVQIPRFMLLESGGLQITPVFIQDAGNYT 566

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N  G   +   L V +  S     P    +       LRC A  +  + + Y+W  
Sbjct: 567 CYAANTEGSLNASAMLTVWNRTSIIHP-PEDHVVIKGTTATLRCGAMHDPRVSLRYVWKK 625

Query: 718 NGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
           +     N+ L  L T  I +  DG LL I+     D G+Y C + S  G  S    + V 
Sbjct: 626 D-----NVVLTPLSTSRIVVEKDGSLL-ISQTWSGDIGDYTCDIVSEGGNDSRMARLEVI 679

Query: 776 GPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             P  P  +       H  +  + W        PI +Y I+  +  NS W  V    +G 
Sbjct: 680 ELPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGP 737

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           E+   T        + L P  TY+F+V A NE+G G+ S+ + +   P + P   P  I 
Sbjct: 738 EMTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIV 790

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 952
             G     + + W+P P  + N     Y + +R      E+Q   +    +  +    + 
Sbjct: 791 ASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVT 847

Query: 953 SEFYYTEYEVKVQAINDVGPG 973
               +T+YE++V A N  G G
Sbjct: 848 DLIIWTQYEIQVAAYNGAGLG 868



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G     P T Y I AR +    W      +  K+
Sbjct: 1914 EGSPGSPRDVLVTK-SASELTLQWTEGYAGDTPTTGYVIEARPSDEGLW-----DMFVKD 1967

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A NE GYGEPSSPS   +   + P+
Sbjct: 1968 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSSPSMAVSAQVEAPF 2018



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 36/213 (16%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            EV   S  +QW  G+    PI ++ +    + R  W +   ++S       V+R      
Sbjct: 1503 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTFSSSISHEATACVVER------ 1556

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
                  L P+++Y+ ++ A N++G  + SS +    T  D P + P  +         + 
Sbjct: 1557 ------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1610

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIA 947
            I W+P   E  N     Y+I++R+   +  +  +++TLK              +  V  +
Sbjct: 1611 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTVNSS 1670

Query: 948  VVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
                  E      Y  YEV + A N +G  P S
Sbjct: 1671 STSTMCELTHLKKYRRYEVIMTAYNIIGESPAS 1703



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1687 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1745

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D++ ++E +K    +   VVR+ +   +T+Y V + A N  G GP 
Sbjct: 1746 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1803

Query: 976  SE 977
            S+
Sbjct: 1804 SD 1805



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 39/241 (16%)

Query: 757  CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 813
              V +    + T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +
Sbjct: 1060 AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1119

Query: 814  IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 866
              +              IG E   V  Y    E   + +    L P++ Y F++   N +
Sbjct: 1120 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1168

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 923
            G    S  S    T    P  AP+ +         L + W PLP  + N    ++ Y+I 
Sbjct: 1169 GPSPYSQSSRVIQTLQAPPDVAPASVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1228

Query: 924  FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 977
            +WR    ++ QS  L +     +   R+  EF       + EYE+++QA N VG GP SE
Sbjct: 1229 YWR----SDVQSSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1279

Query: 978  V 978
            V
Sbjct: 1280 V 1280


>gi|326933709|ref|XP_003212943.1| PREDICTED: neurofascin-like [Meleagris gallopavo]
          Length = 1043

 Score =  203 bits (516), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 172/586 (29%), Positives = 263/586 (44%), Gaps = 55/586 (9%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPR-NAYFENFNRILTIPNVKVEDQGEYICRASN 472
           G  + LEC+A G P P   W ++G  LP      ENFN+ L I NV  ED GEY C ASN
Sbjct: 77  GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 136

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
              ++  ++++ ++A P +     +  +    D    C A G P  +  W  NGE +   
Sbjct: 137 KMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIEGS 196

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                +  R    D   TI + + +    A+YQC A N+     ++A + VL + P    
Sbjct: 197 P---PNPSREVAGD---TIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILA 250

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVS 649
            P        +     + C    +P P   W K+G  N +  GG  K  ENG+L +S   
Sbjct: 251 -PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQGNTL-DGGNYKAHENGSLEMSMAR 308

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           ++D GIY+C ATN+ G  E++ RL V   P+   + P    +      +L C    +  L
Sbjct: 309 KEDQGIYTCVATNILGKAEAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTL 367

Query: 710 DVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767
            +   W  +   + IGN    E        D GL  I   +  D G+Y CV  + + K S
Sbjct: 368 KLTVTWLKDDAPLYIGNRMKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDS 418

Query: 768 TKTTVIV---------EGP---PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 815
            K  + V         E P   P  P  +++ ++ + S  + W  G  N  PIT Y +  
Sbjct: 419 AKAYLTVLAIPANRLRELPKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQF 478

Query: 816 RTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
             +     TW N S         RY G   +++ + L P+  Y+F+VIA N++G   PS 
Sbjct: 479 EEDRFQPGTWHNHS---------RYPGNVNSAVLS-LSPYVNYQFRVIAVNDVGSSLPSM 528

Query: 874 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-E 932
           PS +Y T   +P   P+ + G G +  ++ I+W PL   +   PN+ Y + WR+++    
Sbjct: 529 PSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGS 588

Query: 933 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           + +ET+K   +V   V   P    Y  YE+KVQA ND G  PE E 
Sbjct: 589 WYNETVKAPRHV---VWNTP---IYVPYEIKVQAENDFGRAPEPET 628



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 146/364 (40%), Gaps = 28/364 (7%)

Query: 343 KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN 402
           K    +++ AL  S + + D+G Y C   +K+    R+     +K  P+     L  P N
Sbjct: 107 KTKLENFNKALRISNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPY----WLDEPQN 161

Query: 403 FPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL---PRNAYFENFNRILTIPNVK 459
                  AP  G+  RL C A G P PS  W   G P+   P N   E     +   + +
Sbjct: 162 LIL----AP--GEDGRLVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDTIVFRDTQ 215

Query: 460 VEDQGEYICRASNDRSALESSVTISI-QAEPNFTIPLTDKHMDNQADLT-WTCEAFGVPD 517
           +     Y C ASN+   L ++  +S+    P    P        Q + T   C  FG P 
Sbjct: 216 IGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQYNRTRLDCPFFGSPI 275

Query: 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577
            T  WF+NG+     TL   D   Y   +N      +  + D  +Y C A N L    + 
Sbjct: 276 PTLRWFKNGQ---GNTL---DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGK--AE 327

Query: 578 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF--VWKKDGNIIGSGGRR 635
           AQ+R+    P+   R  E +     G    + C  +  P  K    W KD   +  G R 
Sbjct: 328 AQVRLEVKDPTRIVRGPEDQV-VKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRM 386

Query: 636 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           K  ++G L I  V+  D G Y+C A+     D +K  L VL  P+   +  PK      R
Sbjct: 387 KKEDDG-LTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRELPKERPDRPR 445

Query: 696 NLQL 699
           +L+L
Sbjct: 446 DLEL 449


>gi|45384050|ref|NP_990484.1| neuronal-glial cell adhesion molecule precursor [Gallus gallus]
 gi|1171701|sp|Q03696.2|NGCA_CHICK RecName: Full=Neuronal-glial cell adhesion molecule; Short=Ng-CAM;
           Flags: Precursor
 gi|509767|emb|CAA40290.1| Ng-CAM (neuron-glia cell adhesion melecule) [Gallus gallus]
          Length = 1266

 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 199/788 (25%), Positives = 315/788 (39%), Gaps = 66/788 (8%)

Query: 210 NDITLSCYAGGYPNPSYEWFKED--YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267
           +DI L C A G P   Y W +ED  +V +      + P S        G L+IN      
Sbjct: 52  DDIVLKCVATGNPPVQYRWSREDQPFVPEEHGGVSVVPGS--------GTLVINATLAAR 103

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGV 326
            +G + C A+N  G+ +S    +      ++  ++   +  +     +  CDPP +    
Sbjct: 104 LQGRFRCFATNALGTAVSPEANVIAENTPQWPKEKVTPVEVEEGDPVVLPCDPPESAVPP 163

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             YW        + +D+RV +  DG LYFS A+      +Y C+       T        
Sbjct: 164 KIYWLNSDI-VHIAQDERVSMGQDGNLYFSNAMVGDSHPDYICHAHFLGPRTIIQKEPLD 222

Query: 386 LKVFP----HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
           L+V P     S   +L  P + P+T   A + G  V LEC+A G P P   W R   PL 
Sbjct: 223 LRVAPSNAVRSRRPRLLLPRD-PQTTTIALRGGSVV-LECIAEGLPTPWVRWRRLNGPL- 279

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
                 NFN+ L +  V   D GEY C A N R     + +++++A P +          
Sbjct: 280 LPGGVGNFNKTLRLWGVTESDDGEYECVAENGRGTARGTHSVTVEAAPYWVRRPQSGVFG 339

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE--DQDRYFIQDNVLTIRYLNPERD 559
                   CE  G P     W  NG       +P+E    +R +++   L +  L P  D
Sbjct: 340 PGETARLDCEVGGKPRPQIQWSING-------VPIEAAGAERRWLRGGALVLPELRPN-D 391

Query: 560 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 619
            A+ QC A+N+     ++A L V+ L P       E      E   V + C    AP P 
Sbjct: 392 SAVLQCEARNRHGPLLANAFLHVVEL-PLRMLTADEQRYEVVENQTVFLHCRTFGAPAPN 450

Query: 620 FVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 678
             W            R  +F NG+L +S V   D G+Y+C A N H  + S   L+ +  
Sbjct: 451 VEWLTPTLEPALQDDRSFVFTNGSLRVSAVRGGDGGVYTCMAQNAHS-NGSLTALLEVRA 509

Query: 679 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINI 737
           P+     P   T      +   C A  +  +    + W   G  +        + P  ++
Sbjct: 510 PTRISAPPRSATAKKGETVTFHCGATFDPAVTPGELRWLRGGQPL-------PDDPRYSV 562

Query: 738 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGGVQVVEVHKTSATI 796
               + ++N  + D G  +C   + +     +  + V G PP     +QV+EV +    +
Sbjct: 563 -AAEMTVSNVDYGDEGTIQCRASTPLDSAEAEAQLRVVGRPPSR--DLQVMEVDEHRVRL 619

Query: 797 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN-----VLV 851
            WT G  +  PI               F V E    +++ R  G  +   +       L 
Sbjct: 620 SWTPGDDHNSPIEK-------------FVVEEEEEREDLQRGFGAADVPGQPWTPPLPLS 666

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P+  + F+V+A N  G GE  +PS    TP   P + P  + G G + G+L I+WEPLP 
Sbjct: 667 PYGRFPFRVVAVNAYGRGEHHAPSAPIETPPAAPERNPGGVHGEGNETGNLVITWEPLPP 726

Query: 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEY---GNVGIAVVRIPSEFYYTEYEVKVQAIN 968
           +  NAP   Y++ WR   +      +         V    V +     ++ ++++VQA+N
Sbjct: 727 QAWNAPWARYRVQWRPLEEPGGGGPSGGFPWAESTVDAPPVVVGGLPPFSPFQIRVQAVN 786

Query: 969 DVGPGPES 976
             G GPE+
Sbjct: 787 GAGKGPEA 794


>gi|358254604|dbj|GAA55926.1| neuroglian, partial [Clonorchis sinensis]
          Length = 2525

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 178/587 (30%), Positives = 267/587 (45%), Gaps = 46/587 (7%)

Query: 356 SALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD 415
           +A+E+     Y+C   ++V     NGP + LKVF       +K   N P+T  E   AGD
Sbjct: 6   AAIEEDHDTLYTCVANNEVIRYQTNGPSYLLKVFGTQTNYPVKPLYNTPRT--EVVTAGD 63

Query: 416 KVRLECVAFGYPVPSYNWTRRGSP---LPRNAYFENFNRILTIPNVKVEDQGEYICRASN 472
            +RL+C+  GYP P Y W + G     LP N   +N   +L I  V VE  GEY C+ +N
Sbjct: 64  ILRLKCIFAGYPPPQYTWYKDGKEPIELP-NVNVKNLGTMLEIDPVSVEAAGEYRCQVTN 122

Query: 473 DRSALESSV--TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
           +++ +  ++  T+ +   P F     D  +     + +TC A G P     W  NG+   
Sbjct: 123 EQTRVTGNMQYTVRVHVRPTFVDKPQDTTVPVNGSVIFTCTATGDPAPQIRWTVNGQ--- 179

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
            +     D  R  +Q NV+ +  L   +D A+ QC A N     + +A L V+   P F 
Sbjct: 180 -DPSTYLDGVRKTLQGNVMHLYNLT-VKDTAVIQCNASNAFGYDFVNAYLNVMREPPYFI 237

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 650
           K P ++E    +G  VTI+C   +APK    W KDG  I SGGR +    G+L IS V+ 
Sbjct: 238 KPP-QAEQRVVDGHEVTIYCQTFSAPKALISWTKDGRPI-SGGRYRSLITGDLKISSVAI 295

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE--EL 708
            DSG+Y CTATN  G  ++ GRL+V    S     P    +   + ++  C+A T+  EL
Sbjct: 296 TDSGVYECTATNPFGSRKASGRLLVRRRTSIVLA-PIDTQVYEDQVVKFVCTAETDPMEL 354

Query: 709 LDVAYIWTHNGVRIGNMDLNELE---TPNIN---IDGGLLEITNASFADAGEYECVVKST 762
            ++   W          D N +E   TP I     D  L+ ++ A   D G+Y C   + 
Sbjct: 355 HNLEITWYK--------DDNLIEPNLTPRIQQIWFDYSLV-LSGAQPRDTGQYRCNASNG 405

Query: 763 VGKISTKTTVIVEGPPGLPGGVQV--VEVHKTS-ATIQWTDGATNGRPITHYKIIARTNW 819
           +       +++V+G P     V+V   E  K   A + W  G+ N  PI  Y +   T +
Sbjct: 406 LDYAVASASLLVQGRPEKAIRVEVNCAEFIKDELALVSWYPGSDNYAPIMEYIVEYSTQY 465

Query: 820 -NSTWFNVSEHVIGKEVDRYTGR-KEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSP 876
              TW+         E+  YTG  +  SI+ VL P   Y+F++   N +G   PS + S 
Sbjct: 466 ERDTWYPA-------EIFNYTGLVQSTSIKVVLRPAILYQFRIRTRNRVGVSLPSVATST 518

Query: 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
               PA  P   PS +   G    +L I W  +P  +    N+ Y +
Sbjct: 519 ACGIPARVPATNPSELYIYGSLRNNLIIKWTTMPYIEHYGSNLGYTL 565


>gi|350398908|ref|XP_003485347.1| PREDICTED: Down syndrome cell adhesion molecule-like protein
            CG42256-like [Bombus impatiens]
          Length = 1890

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 205/827 (24%), Positives = 344/827 (41%), Gaps = 101/827 (12%)

Query: 210  NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV--E 267
            +D+ L+C A G P P + W+++      +  + I   S  R  L G  + I   R+V  +
Sbjct: 267  SDVHLTCSAQGTPPPQFTWYRD------VNGHSIPVESFGRIQLWGDLMQI---RRVDAQ 317

Query: 268  DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKA--MFCDPPTNYPG 325
            D G Y C+ASN+ G    +  +       + N +  P +   N G++  M C     YP 
Sbjct: 318  DAGRYICRASNQVGE---QRAETHLSVTSKLNARIQPRVQIINSGESATMNCTV-EGYPV 373

Query: 326  VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             +  W  D  P    +D R+ +     L   ++ + D G Y C V+S   +         
Sbjct: 374  ESVEWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRKDKGMYQCLVRSDKENAQATA---- 429

Query: 386  LKVFPHSNFQQLKFPNNFPK---TFPE-APKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
                      +LK  +  P+   TF E A + G  V L C A G P PS+ W   G PL 
Sbjct: 430  ----------ELKLGDTVPELQYTFIEQALRPGPPVSLRCSATGSPPPSFTWLLDGEPLS 479

Query: 442  RNA---------YFENFNRI---LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
              A         Y +    +   L I +   ED G Y C A+N  + +E    ++I   P
Sbjct: 480  EIASGHRYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNIYGPP 539

Query: 490  ---NFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
                F  P ++    ++A +T T  +  +P + +SW ++GE L S +L +E++   F   
Sbjct: 540  VMSPFNFP-SNLQEGSRAQVTCTVTSGDLP-IYFSWLKDGEPLPS-SLRIEERVAEFF-- 594

Query: 547  NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV 606
            ++L  + L+  R    Y C A N       +A+L ++ + P +   P +  T  G   NV
Sbjct: 595  SLLVFKELS-SRHSGKYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPQDVATLLGNPLNV 652

Query: 607  TIFCNPEAAPKPKFVW----KKDGN-----IIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
               C  +  P P+  W    ++  N     + GS GR  I  NG+L  +     D G Y 
Sbjct: 653  --HCEAKGFPPPRVTWLRARERTSNDYQPLVDGSDGRLTILPNGSLWTASAGPQDEGHYL 710

Query: 658  CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
            C A N  G   SK   + +H P+ +E     +TI    ++ L C+   +  ++V   W H
Sbjct: 711  CRANNGIGSGLSKVIYVSVHEPARFEFQSKNVTIRRGESVTLDCTVIGDNPIEVQ--WMH 768

Query: 718  NGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
            N  R+ + + + L    I  D GL   L I ++   D+G Y C   +  G+      + V
Sbjct: 769  NSDRL-DTNSHRLSISQIKTDNGLKSQLSIASSDRQDSGVYRCTADNAYGRSEHLIYLAV 827

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART-------NWNSTWFNVS 827
            +  P  P  ++V+E+   S  + W        PI +Y I  R+       +WN    +  
Sbjct: 828  QERPDPPASLEVIEIGSRSIRLLWKRAFDGNSPIRNYVIQYRSLNHGLADDWNPAKTHNV 887

Query: 828  EHVIGKE---------------VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
             +  G                  +  +  +E ++   L P  TY F++ A N +    P+
Sbjct: 888  TYTPGSSNNGNNIHPTQNGLSPFETTSDDQEVALVGGLHPAVTYTFRIFAINSIDVSVPT 947

Query: 873  SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
             P     T  + P + P  I       G+L +SW+P P+E  N   + Y + W + + + 
Sbjct: 948  DPV-VAKTQEEAPTEPPQNIKVQSAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSST 1006

Query: 933  F---QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
                QS++L   G      V++     +T+Y++ ++A N +  GP S
Sbjct: 1007 SGVNQSKSLTVNG-WATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 1052



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 146/624 (23%), Positives = 246/624 (39%), Gaps = 63/624 (10%)

Query: 188 RGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           +GP F+ +P + +VF  +  S      LSC A G P P   W       D+     +  L
Sbjct: 40  QGPVFVLEPPSTLVFSNTTGS-----QLSCSAHGSPTPHVTWITSP---DQRSVTAVPGL 91

Query: 247 SDKRFTLSGGNL-----IINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNL 300
              R  L  G L     +  D R       Y C+A++  G+++S  V L A   +  +++
Sbjct: 92  ---RQLLGNGTLYFPPFLAQDFRAEVHNARYRCRATSSVGTVLSREVTLRAVLTVPGYDV 148

Query: 301 K--RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD---YFPNFVEEDKRVFVSYDGALYF 355
           +  R+P +   N   +               W RD     P   +   R  V+  G L+ 
Sbjct: 149 RVNRSPVVEGCNAVLSCTAREDVKEHLTVTSWFRDDAILLPGSTDTGGRFVVTSQGDLHI 208

Query: 356 SALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG 414
            A    D    YSC     ++   R      L V   +     +           + ++G
Sbjct: 209 RAARPEDGRATYSCLTFHALTGERRRSEPATLTVAEPTGSMPPRLMQR--SQIAISAESG 266

Query: 415 DKVRLECVAFGYPVPSYNWTR--RGSPLPRNAYFENFNRI------LTIPNVKVEDQGEY 466
             V L C A G P P + W R   G  +P     E+F RI      + I  V  +D G Y
Sbjct: 267 SDVHLTCSAQGTPPPQFTWYRDVNGHSIP----VESFGRIQLWGDLMQIRRVDAQDAGRY 322

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           ICRASN      +   +S+ ++ N  I    + +++    T  C   G P  +  W  +G
Sbjct: 323 ICRASNQVGEQRAETHLSVTSKLNARIQPRVQIINSGESATMNCTVEGYPVESVEWLHDG 382

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
                  L  +D     +   VL I  +   +D  MYQC  ++  +   ++A+L++    
Sbjct: 383 ----VPVLTAQDTRIRLLAPLVLVIGSVG-RKDKGMYQCLVRSDKENAQATAELKLGDTV 437

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIF----E 639
           P  +   +E     G    V++ C+   +P P F W  DG   + I SG R  I     +
Sbjct: 438 PELQYTFIEQALRPGP--PVSLRCSATGSPPPSFTWLLDGEPLSEIASGHRYAIGQYVDQ 495

Query: 640 NGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           +G+++    IS    +D G+Y+C A N     E K RL + +GP           +    
Sbjct: 496 SGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNI-YGPPVMSPFNFPSNLQEGS 554

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGE 754
             Q+ C+  + + L + + W  +G  +  ++ + E     +     LL     S   +G+
Sbjct: 555 RAQVTCTVTSGD-LPIYFSWLKDGEPLPSSLRIEE----RVAEFFSLLVFKELSSRHSGK 609

Query: 755 YECVVKSTVGKISTKTTVIVEGPP 778
           Y CV  ++  K++    ++V+ PP
Sbjct: 610 YTCVATNSAAKVNHTAELLVKVPP 633


>gi|160774176|gb|AAI55082.1| Sc:d0205 protein [Danio rerio]
          Length = 745

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 193/737 (26%), Positives = 309/737 (41%), Gaps = 69/737 (9%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           +KQP  +V    K  I++   +I + C A G P P+++W        R      +   D 
Sbjct: 38  LKQPPTIVKQSLKDYIVDPRDNIIIECEAKGNPVPTFQW--------RRNGKFFNVGKDP 89

Query: 250 RFTLSG--GNLIINDPRQVED-RGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPE 305
           R T+    G L I    + ED  G Y C ASN  G+ IS  + L       +  +   P 
Sbjct: 90  RVTMRSRSGTLEIRSSGKPEDYEGEYQCFASNNLGTAISNKILLRVSKSPLWPKEVLEPV 149

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG- 364
              +     + C+PP   P    +W  D F   + +D+RV +  +G L+FS +   DA  
Sbjct: 150 TVREGSPLVLACNPPPGLPPPETFWM-DSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKT 208

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA---GDKVRLEC 421
           +YSCN + + + T +    + LKV    N  + + P     T   + K    G+++ LEC
Sbjct: 209 DYSCNARFEFTHTIQQKNPYTLKVQTMRNIPETQ-PTFLSPTGLSSTKMVLRGEELLLEC 267

Query: 422 VAFGYPVPSYNWTRRGSPLP-RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P+  W++RG  LP +     NF++ L I NV  ED G Y C ASN   ++  +
Sbjct: 268 IAAGVPTPTITWSKRGGDLPTKKVRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSIRHT 327

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           V + ++A P +     +  +         C A G P  T  W  NGE + S    L + +
Sbjct: 328 VEVQVKAAPFWLEKPINLVLAPDESGRLVCRANGSPKPTIQWLVNGEPIESS---LPNPN 384

Query: 541 RYFIQDNVL--TIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           R  + D ++  T+++       A+YQC A N+     ++A + VL + P     P     
Sbjct: 385 RRVLDDTIIFETVQF----ESSAVYQCNASNEHGYLLANAFVSVLDMAPRMLG-PKNQLI 439

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGI 655
              E     + C    +P P   W K+G  +GSG   G  +++ NG L I     +D G 
Sbjct: 440 KVIENNRTFLECPFFGSPLPLLRWFKNG--LGSGLDGGHYRLYHNGTLEIKQAQTEDQGT 497

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A+ + G  E++ RL V   P+   + P   T      ++  C    +  L     W
Sbjct: 498 YTCVASIILGKMENQVRLEVKE-PTRIVRAPEHKTEPRGTTVRFDCRVKHDPSLPATVTW 556

Query: 716 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV- 774
             +   +    +  L+      D   L I N +  D G Y C  K+ + + +    + V 
Sbjct: 557 LKDEKPLSFSWIGRLKK-----DDESLTIYNVNPDDGGTYTCTAKTEIDEDTASARLTVT 611

Query: 775 -------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN 820
                         G P  P  +++ +    S  + W  G  N  P+TH+ +      W 
Sbjct: 612 ENDSSSASNRSASAGRPDPPQDLELSDPSARSVRLTWVPGNENNSPVTHFLVQFEEDRWE 671

Query: 821 -STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
              W N+S +               S+   L P+  Y+F+VIA N +G  +PS PS +Y 
Sbjct: 672 PGKWQNLSIY----------DWNLNSVNLQLSPFVNYQFRVIAINAVGQSQPSHPSARYQ 721

Query: 880 TPADKPYQAPSRIGGGG 896
           T    P   PS + G G
Sbjct: 722 TSGAPPDVVPSGLKGWG 738


>gi|156717286|ref|NP_001096185.1| neural cell adhesion molecule L1 precursor [Xenopus (Silurana)
           tropicalis]
 gi|134025431|gb|AAI35443.1| l1cam protein [Xenopus (Silurana) tropicalis]
          Length = 1250

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 198/781 (25%), Positives = 333/781 (42%), Gaps = 53/781 (6%)

Query: 210 NDITLSCYAGGYPNPSYEWFK--EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267
           +DI L C A       Y W K  E +  D       DP   ++      N+  N     +
Sbjct: 56  DDIVLKCEAKRNAKAKYTWKKDGETFQPDN------DPRVSRKKDSGTLNISGNGNSMKD 109

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFN--LKRAPEIGNQNWGKAMFCDPPTNYPG 325
            +G Y C A+N  G+ IS  + +      ++   L R  +I  +     + C+PP +   
Sbjct: 110 FQGKYRCYATNDLGTAISHEIHVITESTPKWQKELIRPLDI-EEGASLILPCNPPKSAVP 168

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPFF 384
               W      + + +D+RV +  +G LYFS +++ D   +Y C+ Q   + T       
Sbjct: 169 PRVIWMNSNLLH-ITQDERVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQKEAI 227

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLECVAFGYPVPSYNWT-RRGSPLP 441
            +KV P ++ +  K     P+       A     ++LEC+A G P P   W    GS   
Sbjct: 228 SIKVRPTNSVKFRKPEMMLPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLLGSTYN 287

Query: 442 RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501
               F++F + L I  V+ ED G+Y C A N + +   + T+ +++ P +     D    
Sbjct: 288 ERIQFDDFKKTLHIDKVQDEDDGDYQCIAKNTQGSSSHTFTVVVESAPYWINKPEDGIYA 347

Query: 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF---IQDNVLTIRYLNPER 558
              D+   CE  G P    +W  NG+        L+D D Y    + D  L +  +    
Sbjct: 348 PGEDIILHCEVGGKPKPKVTWKINGK-------SLKDSDLYHNWKLIDGSLVLNNMQ-LN 399

Query: 559 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 618
           D ++ QC A+N+     ++A + V+ L P    R  E      E  NV++ C     P P
Sbjct: 400 DTSVVQCEARNKHGNLLANAFVYVVELPPQILTRNDEQYIVV-EKTNVSMDCRAFGTPFP 458

Query: 619 KFVWKKD-GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677
              W+ D  + + +  +  +  NG L I+ V+++D GIY CTA+N  G       L V +
Sbjct: 459 TIQWESDLEDNLFALDQFSMHTNGTLTITGVAKEDEGIYRCTASNNQGNVSISAYLDVRN 518

Query: 678 GPSYYEQLPPKITIAAHRNLQ--LRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPN 734
                  + P +   A +  +   +C    + ++ D    W  NG  I      + +   
Sbjct: 519 ATKI---ITPPMEQHARKGGKAIFQCKVEFDPKMSDKIIQWRKNGNEIKE----DADNDK 571

Query: 735 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 794
             I+   L I+N   +D G Y C   + +  +     ++V   P  P  +++    +TS 
Sbjct: 572 YFIEDYTLSISNVQESDHGMYTCAAHTELDAVELTAELVVIDLPEAPFDLELSNAQETSI 631

Query: 795 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854
           T+ WT G  N  PI  + I    +         E  +  E+ R  G    +++  L P+ 
Sbjct: 632 TLTWTPGNDNNSPIEEFIIEYEED-------SFEPGVWHELTRVDGDM-FNVDLDLSPYV 683

Query: 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 914
            Y+F+VIA NE+G    S+PS +Y TPA  P + P  + G G +  ++ ISW+PL     
Sbjct: 684 NYQFRVIAVNEVGPSNGSNPSDRYETPAFAPAKNPREVKGEGTEPQNMYISWKPLKGIDW 743

Query: 915 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
           N P   Y + WR+    E++ E + +   V ++   I     +  YE+ VQ++ND+G   
Sbjct: 744 NGPGFKYLVKWRQLGKEEWK-EVVADSPPVLVSGTSI-----FEPYEIIVQSVNDIGRAT 797

Query: 975 E 975
           E
Sbjct: 798 E 798


>gi|134085176|emb|CAM60068.1| unnamed protein product [Danio rerio]
          Length = 744

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 192/736 (26%), Positives = 308/736 (41%), Gaps = 69/736 (9%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           +KQP  +V    K  I++   +I + C A G P P+++W        R      +   D 
Sbjct: 38  LKQPPTIVKQSLKDYIVDPRDNIIIECEAKGNPVPTFQW--------RRNGKFFNVGKDP 89

Query: 250 RFTLSG--GNLIINDPRQVED-RGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPE 305
           R T+    G L I    + ED  G Y C ASN  G+ IS  + L       +  +   P 
Sbjct: 90  RVTMRSRSGTLEIRSSGKPEDYEGEYQCFASNNLGTAISNKILLRVSKSPLWPKEVLEPV 149

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG- 364
              +     + C+PP   P    +W  D F   + +D+RV +  +G L+FS +   DA  
Sbjct: 150 TVREGSPLVLACNPPPGLPPPETFWM-DSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKT 208

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA---GDKVRLEC 421
           +YSCN + + + T +    + LKV    N  + + P     T   + K    G+++ LEC
Sbjct: 209 DYSCNARFEFTHTIQQKNPYTLKVQTMRNIPETQ-PTFLSPTGLSSTKMVLRGEELLLEC 267

Query: 422 VAFGYPVPSYNWTRRGSPLP-RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P+  W++RG  LP +     NF++ L I NV  ED G Y C ASN   ++  +
Sbjct: 268 IAAGVPTPTITWSKRGGDLPTKKVRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSIRHT 327

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           V + ++A P +     +  +         C A G P  T  W  NGE + S    L + +
Sbjct: 328 VEVQVKAAPFWLEKPINLVLAPDESGRLVCRANGSPKPTIQWLVNGEPIESS---LPNPN 384

Query: 541 RYFIQDNVL--TIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
           R  + D ++  T+++       A+YQC A N+     ++A + VL + P     P     
Sbjct: 385 RRVLDDTIIFETVQF----ESSAVYQCNASNEHGYLLANAFVSVLDMAPRMLG-PKNQLI 439

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGI 655
              E     + C    +P P   W K+G  +GSG   G  +++ NG L I     +D G 
Sbjct: 440 KVIENNRTFLECPFFGSPLPLLRWFKNG--LGSGLDGGHYRLYHNGTLEIKQAQTEDQGT 497

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C A+ + G  E++ RL V   P+   + P   T      ++  C    +  L     W
Sbjct: 498 YTCVASIILGKMENQVRLEVKE-PTRIVRAPEHKTEPRGTTVRFDCRVKHDPSLPATVTW 556

Query: 716 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV- 774
             +   +    +  L+      D   L I N +  D G Y C  K+ + + +    + V 
Sbjct: 557 LKDEKPLSFSWIGRLKK-----DDESLTIYNVNPDDGGTYTCTAKTEIDEDTASARLTVT 611

Query: 775 -------------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN 820
                         G P  P  +++ +    S  + W  G  N  P+TH+ +      W 
Sbjct: 612 ENDSSSASNRSASAGRPDPPQDLELSDPSARSVRLTWVPGNENNSPVTHFLVQFEEDRWE 671

Query: 821 -STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
              W N+S +               S+   L P+  Y+F+VIA N +G  +PS PS +Y 
Sbjct: 672 PGKWQNLSIY----------DWNLNSVNLQLSPFVNYQFRVIAINAVGQSQPSHPSARYQ 721

Query: 880 TPADKPYQAPSRIGGG 895
           T    P   P  + GG
Sbjct: 722 TSGAPPDVVPRDLKGG 737


>gi|402895017|ref|XP_003910634.1| PREDICTED: contactin-5-like, partial [Papio anubis]
          Length = 463

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 192/404 (47%), Gaps = 37/404 (9%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           + +  GP F+++P D++F          + L+C   G P PSY W +            I
Sbjct: 93  ESVDYGPVFVQEPDDIIFPTDSDE--KKVALNCEVRGNPVPSYRWLRN--------GTEI 142

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-R 302
           D  SD R++L  G  II++P + +D G Y C A+N  GSI+S    L F ++G F+ + R
Sbjct: 143 DLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGRTR 202

Query: 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQI 361
           +     +  G  + C PP + P + Y W  + FP+FV ED R F+S + G LY S ++  
Sbjct: 203 SAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTS 262

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRL 419
           D G+Y C V++ V++     P  PL +       +   K   +FP  F      G  V++
Sbjct: 263 DVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFP--FMVTAAKGTTVKM 320

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           EC A G PVP+  W +    +P  A       +L IPNV+++D G Y CRA N R   ++
Sbjct: 321 ECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAENSRG--KN 378

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
           S    +Q            +              G P  TY W +NG       +PL  Q
Sbjct: 379 SFRGQLQV-----------YXXXXXXXXXXXXXXGKPRPTYRWLKNG-------VPLSSQ 420

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
            R  + + VL I  +N + D  MYQC A+N+    Y+SA+L++L
Sbjct: 421 SRVEMVNGVLMIHNVN-QSDAGMYQCLAENKYGAIYASAELKIL 463



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 133/359 (37%), Gaps = 35/359 (9%)

Query: 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN 547
           EP+  I  TD    ++  +   CE  G P  +Y W RNG  ++     LE   RY + D 
Sbjct: 104 EPDDIIFPTD---SDEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDG 155

Query: 548 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 607
              I   +  +D   YQC A N L +  S           +F  R   S     EG  V 
Sbjct: 156 TFIISNPSEAKDSGHYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVV 214

Query: 608 IFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----T 659
           + C+P   +P+  + W   +  + +    RR I  E GNL IS V   D G Y C    T
Sbjct: 215 LMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNT 274

Query: 660 ATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
            TN   +       +   G      P      P  +T A    +++ C A    +  + +
Sbjct: 275 VTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNPVPTITW 334

Query: 714 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
           +   NG       L + +         +LEI N    DAG YEC  +++ GK S +  + 
Sbjct: 335 MKV-NGYIPSKARLRKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQ 385

Query: 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
           V                K   T +W     NG P++    +   N      NV++   G
Sbjct: 386 VYXXXXXXXXXXXXXXGKPRPTYRWLK---NGVPLSSQSRVEMVNGVLMIHNVNQSDAG 441



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 87/235 (37%), Gaps = 36/235 (15%)

Query: 453 LTIPNVKVEDQGEYICRASNDRSALE-----SSVTI---SIQAEPNFTIPLTDKHMDNQA 504
           L I  V+  D G YIC   N  +        + +T+    +  E    I +    M   A
Sbjct: 254 LYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAA 313

Query: 505 DLT---WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
             T     C A G P  T +W +    + S+    + Q    I +  L         D  
Sbjct: 314 KGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQAVLEIPNVQLD--------DAG 365

Query: 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 621
           +Y+CRA+N         QL+V                Y                P+P + 
Sbjct: 366 IYECRAENSRGKNSFRGQLQV----------------YXXXXXXXXXXXXXXGKPRPTYR 409

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
           W K+G  + S  R ++  NG L+I  V++ D+G+Y C A N +G   +   L +L
Sbjct: 410 WLKNGVPLSSQSRVEMV-NGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKIL 463


>gi|119220552|ref|NP_689957.3| protein sidekick-1 isoform 1 [Homo sapiens]
 gi|296452965|sp|Q7Z5N4.3|SDK1_HUMAN RecName: Full=Protein sidekick-1; Flags: Precursor
          Length = 2213

 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 197/806 (24%), Positives = 324/806 (40%), Gaps = 75/806 (9%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W ++D       + L    S+
Sbjct: 103 APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMRDD-------SELTTYSSE 151

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 152 YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVS 203

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 204 QGRAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTTSDAGAYYV 261

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECV 422
              ++ +   +  PF  L +      + +  P     T    P          +  LEC+
Sbjct: 262 QAVNEKNGENKTSPFIHLSIA-----RDVGTPETMAPTIVVPPGNRSVVAGSSETTLECI 316

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-- 478
           A   PV   S  W R G  +   +   +F R LTI N    D G Y+C A+   SA E  
Sbjct: 317 ASARPVEDLSVTWKRNGVRI--TSGLHSFGRRLTISNPTSADTGPYVCEAALPGSAFEPA 374

Query: 479 -SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            ++  + I   P FT  P +    + +  +   C+A GVP  T  W+++   ++     L
Sbjct: 375 RATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISR----L 430

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ++     +    L I+ L PE D  ++QC A N+     +   L V  + P F +RP++ 
Sbjct: 431 QNPRYKVLASGGLRIQKLRPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVD- 488

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDD 652
            T   +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D
Sbjct: 489 -TTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQD 547

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   +   L V +  S     P    +       L C A  +  + + 
Sbjct: 548 AGNYTCYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLR 606

Query: 713 YIWTHNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           Y+W  +     N+ L    T  I +  DG LL I+     D G+Y C + S  G  S   
Sbjct: 607 YVWKKD-----NVALTPSSTSRIVVEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMA 660

Query: 771 TVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
            + V   P  P  + V     H  +  + W        PI +Y I+  +  NS W  V  
Sbjct: 661 RLEVIELPHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHL 718

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +G E+   T        + L P  TY+F+V A NE+G G+ S+ + +   P + P   
Sbjct: 719 SNVGPEMTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAP 771

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIA 947
           P  I   G     + + W+P P  + N     Y + +R      E+Q   +    +  + 
Sbjct: 772 PKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVN 828

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPG 973
              +     +T+YE++V A N  G G
Sbjct: 829 YCLVTDLIIWTQYEIQVAAYNGAGLG 854



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R       S++  L    TYEF+V+A NE GYGEPS+PS   +   + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 36/217 (16%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 839
            V   EV   S  +QW  G+    PI ++ +    + R  W +   ++S       VDR  
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1542

Query: 840  GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
                      L P+++Y+ ++ A N++G  + SS +    T  D P + P  +       
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592

Query: 900  GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 943
              + I W+P   E  N     Y+I++R+              KN     +E   +  +  
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKT 1652

Query: 944  VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
            V  +      E      Y  YEV + A N +G  P S
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPAS 1689



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1673 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1731

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D++ ++E +K    +   VVR+ +   +T+Y V + A N  G GP+
Sbjct: 1732 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPK 1789

Query: 976  SE 977
            S+
Sbjct: 1790 SD 1791



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 41/233 (17%)

Query: 766  ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 822
            + T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +      
Sbjct: 1055 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1110

Query: 823  WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 875
                    IG E   V  Y    E   + +    L P++ Y F++   N +G   P SPS
Sbjct: 1111 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1162

Query: 876  PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 931
             +   T    P  AP+ +         L + W PLP  + N    ++ Y+I +WR    +
Sbjct: 1163 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1218

Query: 932  EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEV 978
            + QS  + +     +   R+  EF       + EYE+++QA N VG GP SEV
Sbjct: 1219 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEV 1266


>gi|32351274|gb|AAP75619.1| sidekick-like protein 1 [Homo sapiens]
          Length = 2213

 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 196/806 (24%), Positives = 324/806 (40%), Gaps = 75/806 (9%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W ++D       + L    S+
Sbjct: 103 APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMRDD-------SELTTYSSE 151

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 152 YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVS 203

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 204 QGRAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTTSDAGAYYV 261

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECV 422
              ++ +   +  PF  L +      + +  P     T    P          +  LEC+
Sbjct: 262 QAVNEKNGENKTSPFIHLSIA-----RDVGTPETMAPTIVVPPGNRSVVAGSSETTLECI 316

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-- 478
           A   PV   S  W R G  +   +   +F R LTI N    D G Y+C A+   SA E  
Sbjct: 317 ASARPVEDLSVTWKRNGVRI--TSGLHSFGRHLTISNPTSADTGPYVCEAALPGSAFEPA 374

Query: 479 -SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            ++  + I   P FT  P +    + +  +   C+A GVP  T  W+++   ++     L
Sbjct: 375 RATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISR----L 430

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ++     +    L I+ L PE D  ++QC A N+     +   L V  + P F +RP++ 
Sbjct: 431 QNPRYKVLASGGLRIQKLRPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVD- 488

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDD 652
            T   +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D
Sbjct: 489 -TTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQD 547

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   +   L V +  S     P    +       L C A  +  + + 
Sbjct: 548 AGNYTCYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLR 606

Query: 713 YIWTHNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           Y+W  +     N+ L    T  I +  DG LL I+     D G+Y C + S  G  S   
Sbjct: 607 YVWKKD-----NVALTPSSTSRIVVEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMA 660

Query: 771 TVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
            + V   P  P  + V     H  +  + W        PI +Y  I   + NS+ + V  
Sbjct: 661 RLEVIELPHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYY--IVELSENSSPWKVHL 718

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +G E+   T        + L P  TY+F+V A NE+G G+ S+ + +   P + P   
Sbjct: 719 SNVGPEMTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAP 771

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIA 947
           P  I   G     + + W+P P  + N     Y + +R      E+Q   +    +  + 
Sbjct: 772 PKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVN 828

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPG 973
              +     +T+YE++V A N  G G
Sbjct: 829 YCLVTDLIIWTQYEIQVAAYNGAGLG 854



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R       S++  L    TYEF+V+A NE GYGEPS+PS   +   + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 36/217 (16%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 839
            V   EV   S  +QW  G+    PI ++ +    + R  W +   ++S       VDR  
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1542

Query: 840  GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
                      L P+++Y+ ++ A N++G  + SS +    T  D P + P  +       
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592

Query: 900  GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 943
              + I W+P   E  N     Y+I++R+              KN     +E   +  +  
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALXAELTAQSSFKT 1652

Query: 944  VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
            V  +      E      Y  YEV + A N +G  P S
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPAS 1689



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1673 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1731

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D++ ++E +K    +   VVR+ +   +T+Y V + A N  G GP+
Sbjct: 1732 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPK 1789

Query: 976  SE 977
            S+
Sbjct: 1790 SD 1791



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 41/233 (17%)

Query: 766  ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 822
            + T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +      
Sbjct: 1055 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1110

Query: 823  WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 875
                    IG E   V  Y    E   + +    L P++ Y F++   N +G   P SPS
Sbjct: 1111 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1162

Query: 876  PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 931
             +   T    P  AP+ +         L + W PLP  + N    ++ Y+I +WR    +
Sbjct: 1163 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1218

Query: 932  EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEV 978
            + QS  + +     +   R+  EF       + EYE+++QA N VG GP SEV
Sbjct: 1219 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEV 1266


>gi|328783969|ref|XP_396307.4| PREDICTED: LOW QUALITY PROTEIN: immunoglobulin-like and fibronectin
            type III domain containing 6 [Apis mellifera]
          Length = 1895

 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 205/827 (24%), Positives = 344/827 (41%), Gaps = 101/827 (12%)

Query: 210  NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV--E 267
            +D+ L+C A G P P + W+++      +  + I   S  R  L G  + I   R+V  +
Sbjct: 267  SDVHLTCSAQGNPAPQFAWYRD------VNGHSIPVESFGRIQLWGDLMQI---RRVDAQ 317

Query: 268  DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKA--MFCDPPTNYPG 325
            D G Y C+ASN+ G    +  +       + N +  P +   N G++  M C     YP 
Sbjct: 318  DAGRYICRASNQVGE---QRAETHLSVTSKLNARIQPRVQIINSGESATMNCTV-EGYPV 373

Query: 326  VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             +  W  D  P    +D R+ +     L   ++ + D G Y C V+S   +         
Sbjct: 374  ESVEWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRKDKGMYQCLVRSDKENAQATA---- 429

Query: 386  LKVFPHSNFQQLKFPNNFPK---TFPE-APKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
                      +LK  +  P+   TF E A + G  V L C A G P PS+ W   G PL 
Sbjct: 430  ----------ELKLGDTVPELQYTFIEQALRPGPPVSLRCSATGSPPPSFTWLLDGEPLS 479

Query: 442  RNA---------YFENFNRI---LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
              A         Y +    +   L I +   ED G Y C A+N  + +E    ++I   P
Sbjct: 480  EIASGHRYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNIYGPP 539

Query: 490  ---NFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
                F  P ++    ++A +T T  +  +P + +SW ++GE L S +L +E++   F   
Sbjct: 540  IMTPFNFP-SNLQEGSRAQVTCTVTSGDLP-IYFSWLKDGEPLPS-SLRIEERVAEFF-- 594

Query: 547  NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV 606
            ++L  + L+  R    Y C A N       +A+L ++ + P +   P +  T  G   NV
Sbjct: 595  SLLVFKELS-SRHSGKYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPQDVATLLGNPLNV 652

Query: 607  TIFCNPEAAPKPKFVW----KKDGN-----IIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
               C  +  P P+  W    ++  N     I G+ GR  I  NG+L  +     D G Y 
Sbjct: 653  --HCEAKGFPPPRVTWLRARERTSNDYQPLIDGTDGRLTILPNGSLWTASAGPQDEGHYL 710

Query: 658  CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
            C A N  G   SK   + +H P+ +E     +TI    ++ L C+   +  ++V   W H
Sbjct: 711  CRANNGIGSGLSKVIYVSVHEPARFEFQSKNVTIRRGESVTLDCTVIGDNPIEVQ--WMH 768

Query: 718  NGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
            N  R+ + + + L    I  D GL   L I ++   D+G Y C   +  G+      + V
Sbjct: 769  NSDRL-DTNNHRLSISQIKTDNGLKSQLSIGSSDRQDSGVYRCTADNAYGRSEHLIYLAV 827

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART-------NWNSTWFNVS 827
            +  P  P  ++V+E+   S  + W        PI +Y I  R+       +WN    +  
Sbjct: 828  QERPDPPASLEVIEIGSRSIRLLWRRAFDGNSPIRNYVIQYRSLNHGLADDWNPAKTHNV 887

Query: 828  EHVIGKE---------------VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
             +  G                  +  +  +E ++   L P  TY F++ A N +    P+
Sbjct: 888  TYTPGHSNNGNTIHPTQNGLSPFETTSDDQEVALVGGLHPAVTYTFRIFAINSIDVSVPT 947

Query: 873  SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
             P     T  + P + P  I       G+L +SW+P P+E  N   + Y + W + + + 
Sbjct: 948  DPV-VAKTQEEAPTEPPQNIKVQSAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSST 1006

Query: 933  F---QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
                QS++L   G      V++     +T+Y++ ++A N +  GP S
Sbjct: 1007 SGVNQSKSLTVNG-WATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 1052



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 146/624 (23%), Positives = 246/624 (39%), Gaps = 63/624 (10%)

Query: 188 RGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           +GP F+ +P + +VF  +  S      LSC A G P P   W       D+     +  L
Sbjct: 40  QGPVFVLEPPSTLVFSNTTGS-----QLSCSAHGSPTPHVTWITSP---DQRSVTAVPGL 91

Query: 247 SDKRFTLSGGNL-----IINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNL 300
              R  L  G L     +  D R       Y C+A++  G+++S  V L A   +  +++
Sbjct: 92  ---RQLLGNGTLYFPPFLAQDFRAEVHNARYRCRATSSVGTVLSREVTLRAVLTVPGYDV 148

Query: 301 K--RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD---YFPNFVEEDKRVFVSYDGALYF 355
           +  R+P +   N   +               W RD     P   +   R  V+  G L+ 
Sbjct: 149 RVNRSPVLEGCNAVLSCTAREDVKEHLTVTSWFRDDAILLPGSTDTGGRFVVTSQGDLHI 208

Query: 356 SALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG 414
            A    D    YSC     ++   R      L V   +     +           + ++G
Sbjct: 209 RAARPDDGRATYSCLTFHALTGERRRSEPATLTVTEPTGTMPPRLMQR--SQIAISAESG 266

Query: 415 DKVRLECVAFGYPVPSYNWTR--RGSPLPRNAYFENFNRI------LTIPNVKVEDQGEY 466
             V L C A G P P + W R   G  +P     E+F RI      + I  V  +D G Y
Sbjct: 267 SDVHLTCSAQGNPAPQFAWYRDVNGHSIP----VESFGRIQLWGDLMQIRRVDAQDAGRY 322

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           ICRASN      +   +S+ ++ N  I    + +++    T  C   G P  +  W  +G
Sbjct: 323 ICRASNQVGEQRAETHLSVTSKLNARIQPRVQIINSGESATMNCTVEGYPVESVEWLHDG 382

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
                  L  +D     +   VL I  +   +D  MYQC  ++  +   ++A+L++    
Sbjct: 383 ----VPVLTAQDTRIRLLAPLVLVIGSVG-RKDKGMYQCLVRSDKENAQATAELKLGDTV 437

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIF----E 639
           P  +   +E     G    V++ C+   +P P F W  DG   + I SG R  I     +
Sbjct: 438 PELQYTFIEQALRPGP--PVSLRCSATGSPPPSFTWLLDGEPLSEIASGHRYAIGQYVDQ 495

Query: 640 NGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           +G+++    IS    +D G+Y+C A N     E K RL + +GP           +    
Sbjct: 496 SGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNI-YGPPIMTPFNFPSNLQEGS 554

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGE 754
             Q+ C+  + + L + + W  +G  +  ++ + E      +    LL     S   +G+
Sbjct: 555 RAQVTCTVTSGD-LPIYFSWLKDGEPLPSSLRIEERVAEFFS----LLVFKELSSRHSGK 609

Query: 755 YECVVKSTVGKISTKTTVIVEGPP 778
           Y CV  ++  K++    ++V+ PP
Sbjct: 610 YTCVATNSAAKVNHTAELLVKVPP 633


>gi|432092483|gb|ELK25098.1| Contactin-6 [Myotis davidii]
          Length = 760

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 226/490 (46%), Gaps = 39/490 (7%)

Query: 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
           A P +   + D ++     L W C+A G P   Y+W +NGE L +E       +R  +++
Sbjct: 45  APPEWEQKIQDTYLSIYDSLFWECKAQGKPRPWYTWLKNGERLGAE-------ERIQVEN 97

Query: 547 NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV 606
             LTI  LN   D  +YQC A+N+  T Y++A+LRVL    +F      S  +A   G  
Sbjct: 98  GTLTITMLNVS-DSGVYQCAAENKHHTIYANAELRVL----AFLALSPASPGWALTMGR- 151

Query: 607 TIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666
            +   P A   P+           SG    + E+G+L I   SR D+G Y+C ATN  G+
Sbjct: 152 -LRAAPPACTLPQLC---------SGKVVFVLEDGSLKIQNASRSDAGPYTCVATNPFGV 201

Query: 667 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 726
             S G L+V    +   + P  + +    ++ L C    +  ++VA++W+ NG  I   D
Sbjct: 202 ARSTGGLVVKER-TIITEPPSPMDVTVGESIVLTCQVSHDPSMEVAFVWSFNGHII---D 257

Query: 727 LNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783
           L +       I GG    L I N   + +G Y C V + +  +S    +IV GPP     
Sbjct: 258 LKKDAAHFERIGGGSVGDLMIRNIQLSHSGRYLCAVTTALENLSAVAEIIVRGPPE---E 314

Query: 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
           V+V  +  T++ + W  G+ N  PI  + I ART ++  W  VS        +   G+  
Sbjct: 315 VRVEHISSTTSQLSWRPGSDNNSPIQIFTIQARTPFSVGWQAVS-----TVPEILNGQTY 369

Query: 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            +    L+PW  YEF+V+AGN +G GEPS  S    T A  P  AP+ I GGGG   +L 
Sbjct: 370 NATVVGLIPWVEYEFRVLAGNSIGIGEPSKASELLRTKASVPIVAPTNIQGGGGSRSELV 429

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
           ++WEP+P E Q+     Y +  R      +  E +         V R  S    + +EVK
Sbjct: 430 VTWEPIPEELQSGGEFGYLVMLRPVGSAIWTKERVPSV-EASRFVYRNESITPLSPFEVK 488

Query: 964 VQAINDVGPG 973
           V   N  G G
Sbjct: 489 VGVYNSEGEG 498



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 131/591 (22%), Positives = 210/591 (35%), Gaps = 78/591 (13%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
           D +  EC A G P P Y W + G  L      +  N  LTI  + V D G Y C A N  
Sbjct: 62  DSLFWECKAQGKPRPWYTWLKNGERLGAEERIQVENGTLTITMLNVSDSGVYQCAAENKH 121

Query: 475 SALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
                  TI   AE      L          LT        P  T     +G+++     
Sbjct: 122 H------TIYANAELRVLAFLALSPASPGWALTMGRLRAAPPACTLPQLCSGKVV----- 170

Query: 535 PLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
                  + ++D  L I+  N  R D   Y C A N      S+  L V+  +    + P
Sbjct: 171 -------FVLEDGSLKIQ--NASRSDAGPYTCVATNPFGVARSTGGL-VVKERTIITEPP 220

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------GNLLISP 647
              +   GE   +T   + + + +  FVW  +G+II        FE       G+L+I  
Sbjct: 221 SPMDVTVGESIVLTCQVSHDPSMEVAFVWSFNGHIIDLKKDAAHFERIGGGSVGDLMIRN 280

Query: 648 VSRDDSGIYSCTAT----NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           +    SG Y C  T    N+  + E     I++ GP   E++  +   +    L  R  +
Sbjct: 281 IQLSHSGRYLCAVTTALENLSAVAE-----IIVRGPP--EEVRVEHISSTTSQLSWRPGS 333

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKS 761
                + +  I       +G   ++ +  P I ++G     T        EYE   +  +
Sbjct: 334 DNNSPIQIFTIQARTPFSVGWQAVSTV--PEI-LNGQTYNATVVGLIPWVEYEFRVLAGN 390

Query: 762 TVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATNG 805
           ++G          + TK +V +  P  + GG       ++   + W         G   G
Sbjct: 391 SIGIGEPSKASELLRTKASVPIVAPTNIQGGGG----SRSELVVTWEPIPEELQSGGEFG 446

Query: 806 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865
                Y ++ R   ++ W    E V   E  R+  R E+     + P S +E KV   N 
Sbjct: 447 -----YLVMLRPVGSAIW--TKERVPSVEASRFVYRNES-----ITPLSPFEVKVGVYNS 494

Query: 866 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 925
            G G   S      +  D+P  AP           ++ +SW  +   +     + Y++ +
Sbjct: 495 EGEGAALSTVSIVYSGEDEPQLAPRGTSAQSFSASEMEVSWTAIAWNRITGRVLGYEVLY 554

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
              +  E     ++ +GN  I    I      T Y   V+A N  G GP S
Sbjct: 555 WTDDSREPMIGKVRVHGN--ITTKTIMGLKANTIYFASVRAYNTGGTGPSS 603



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 100/292 (34%), Gaps = 47/292 (16%)

Query: 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266
           SI + +   C A G P P Y W K     +RL A       ++R  +  G L I     V
Sbjct: 59  SIYDSLFWECKAQGKPRPWYTWLKNG---ERLGA-------EERIQVENGTLTITM-LNV 107

Query: 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV 326
            D G Y C A NK  +I + +      F+    L  A        G+     P    P +
Sbjct: 108 SDSGVYQCAAENKHHTIYANAELRVLAFLA---LSPASPGWALTMGRLRAAPPACTLPQL 164

Query: 327 NYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
                           K VFV  DG+L      + DAG Y+C   +         PF   
Sbjct: 165 C-------------SGKVVFVLEDGSLKIQNASRSDAGPYTCVATN---------PFGVA 202

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRNA 444
           +       ++       P   P     G+ + L C     P    ++ W+  G  +    
Sbjct: 203 RSTGGLVVKERTIITEPPS--PMDVTVGESIVLTCQVSHDPSMEVAFVWSFNGHIIDLKK 260

Query: 445 YFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
              +F RI       L I N+++   G Y+C  +     L +   I ++  P
Sbjct: 261 DAAHFERIGGGSVGDLMIRNIQLSHSGRYLCAVTTALENLSAVAEIIVRGPP 312


>gi|380029950|ref|XP_003698626.1| PREDICTED: Down syndrome cell adhesion molecule-like protein
            Dscam2-like [Apis florea]
          Length = 1848

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 205/827 (24%), Positives = 344/827 (41%), Gaps = 101/827 (12%)

Query: 210  NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV--E 267
            +D+ L+C A G P P + W+++      +  + I   S  R  L G  + I   R+V  +
Sbjct: 249  SDVHLTCSAQGNPAPQFAWYRD------VNGHSIPVESFGRIQLWGDLMQI---RRVDAQ 299

Query: 268  DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKA--MFCDPPTNYPG 325
            D G Y C+ASN+ G    +  +       + N +  P +   N G++  M C     YP 
Sbjct: 300  DAGRYICRASNQIGE---QRAETHLSVTSKLNARIQPRVQIINSGESATMNCTV-EGYPV 355

Query: 326  VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385
             +  W  D  P    +D R+ +     L   ++ + D G Y C V+S   +         
Sbjct: 356  ESVEWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRKDKGMYQCLVRSDKENAQATA---- 411

Query: 386  LKVFPHSNFQQLKFPNNFPK---TFPE-APKAGDKVRLECVAFGYPVPSYNWTRRGSPLP 441
                      +LK  +  P+   TF E A + G  V L C A G P PS+ W   G PL 
Sbjct: 412  ----------ELKLGDTVPELQYTFIEQALRPGPPVSLRCSATGSPPPSFTWLLDGEPLS 461

Query: 442  RNA---------YFENFNRI---LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489
              A         Y +    +   L I +   ED G Y C A+N  + +E    ++I   P
Sbjct: 462  EIASGHRYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNIYGPP 521

Query: 490  ---NFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD 546
                F  P ++    ++A +T T  +  +P + +SW ++GE L S +L +E++   F   
Sbjct: 522  VMSPFNFP-SNLQEGSRAQVTCTVTSGDLP-IYFSWLKDGEPLPS-SLRIEERVAEFF-- 576

Query: 547  NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV 606
            ++L  + L+  R    Y C A N       +A+L ++ + P +   P +  T  G   NV
Sbjct: 577  SLLVFKELS-SRHSGKYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPQDVATLLGNPLNV 634

Query: 607  TIFCNPEAAPKPKFVW----KKDGN-----IIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
               C  +  P P+  W    ++  N     I G+ GR  I  NG+L  +     D G Y 
Sbjct: 635  --HCEAKGFPPPRVTWLRARERTSNDYQPLIDGTDGRLTILPNGSLWTASAGPQDEGHYL 692

Query: 658  CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
            C A N  G   SK   + +H P+ +E     +TI    ++ L C+   +  ++V   W H
Sbjct: 693  CRANNGIGSGLSKVIYVSVHEPARFEFQSKNVTIRRGESVTLDCTVIGDNPIEVQ--WMH 750

Query: 718  NGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
            N  R+ + + + L    I  D GL   L I ++   D+G Y C   +  G+      + V
Sbjct: 751  NSDRL-DTNNHRLSISQIKTDNGLKSQLSIGSSDRQDSGVYRCTADNAYGRSEHLIYLAV 809

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART-------NWNSTWFNVS 827
            +  P  P  ++V+E+   S  + W        PI +Y I  R+       +WN    +  
Sbjct: 810  QERPDPPASLEVIEIGSRSIRLLWRRAFDGNSPIRNYVIQYRSLNHGLADDWNPAKTHNV 869

Query: 828  EHVIGKE---------------VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
             +  G                  +  +  +E ++   L P  TY F++ A N +    P+
Sbjct: 870  TYTPGHSNNGNTIHPTQNGLSPFETTSDDQEVALVGGLHPAVTYTFRIFAINSIDVSVPT 929

Query: 873  SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
             P     T  + P + P  I       G+L +SW+P P+E  N   + Y + W + + + 
Sbjct: 930  DPV-VAKTQEEAPTEPPQNIKVQSAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSST 988

Query: 933  F---QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
                QS++L   G      V++     +T+Y++ ++A N +  GP S
Sbjct: 989  SGVNQSKSLTVNG-WATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 1034



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 146/624 (23%), Positives = 246/624 (39%), Gaps = 63/624 (10%)

Query: 188 RGPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           +GP F+ +P + +VF  +  S      LSC A G P P   W       D+     +  L
Sbjct: 22  QGPVFVLEPPSTLVFSNTTGS-----QLSCSAHGSPTPHVTWITSP---DQRSVTAVPGL 73

Query: 247 SDKRFTLSGGNL-----IINDPRQVEDRGSYHCKASNKFGSIISESVQL-AFGFIGEFNL 300
              R  L  G L     +  D R       Y C+A++  G+++S  V L A   +  +++
Sbjct: 74  ---RQLLGNGTLYFPPFLAQDFRAEVHNARYRCRATSSVGTVLSREVTLRAVLTVPGYDV 130

Query: 301 K--RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD---YFPNFVEEDKRVFVSYDGALYF 355
           +  R+P +   N   +               W RD     P   +   R  V+  G L+ 
Sbjct: 131 RVNRSPVLEGCNAVLSCTAREDVKEHLTVTSWFRDDAILLPGSTDTGGRFVVTSQGDLHI 190

Query: 356 SALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG 414
            A    D    YSC     ++   R      L V   +     +           + ++G
Sbjct: 191 RATRPDDGRATYSCLTFHALTGERRRSEPATLTVTEPTGTMPPRLMQR--SQIAISAESG 248

Query: 415 DKVRLECVAFGYPVPSYNWTR--RGSPLPRNAYFENFNRI------LTIPNVKVEDQGEY 466
             V L C A G P P + W R   G  +P     E+F RI      + I  V  +D G Y
Sbjct: 249 SDVHLTCSAQGNPAPQFAWYRDVNGHSIP----VESFGRIQLWGDLMQIRRVDAQDAGRY 304

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           ICRASN      +   +S+ ++ N  I    + +++    T  C   G P  +  W  +G
Sbjct: 305 ICRASNQIGEQRAETHLSVTSKLNARIQPRVQIINSGESATMNCTVEGYPVESVEWLHDG 364

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
                  L  +D     +   VL I  +   +D  MYQC  ++  +   ++A+L++    
Sbjct: 365 ----VPVLTAQDTRIRLLAPLVLVIGSVG-RKDKGMYQCLVRSDKENAQATAELKLGDTV 419

Query: 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIF----E 639
           P  +   +E     G    V++ C+   +P P F W  DG   + I SG R  I     +
Sbjct: 420 PELQYTFIEQALRPGP--PVSLRCSATGSPPPSFTWLLDGEPLSEIASGHRYAIGQYVDQ 477

Query: 640 NGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 695
           +G+++    IS    +D G+Y+C A N     E K RL + +GP           +    
Sbjct: 478 SGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNI-YGPPVMSPFNFPSNLQEGS 536

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGE 754
             Q+ C+  + + L + + W  +G  +  ++ + E     +     LL     S   +G+
Sbjct: 537 RAQVTCTVTSGD-LPIYFSWLKDGEPLPSSLRIEE----RVAEFFSLLVFKELSSRHSGK 591

Query: 755 YECVVKSTVGKISTKTTVIVEGPP 778
           Y CV  ++  K++    ++V+ PP
Sbjct: 592 YTCVATNSAAKVNHTAELLVKVPP 615


>gi|149051180|gb|EDM03353.1| rCG62174, isoform CRA_b [Rattus norvegicus]
          Length = 1250

 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 208/824 (25%), Positives = 337/824 (40%), Gaps = 119/824 (14%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYVQDRLVANL 242
           P  + QP  +     K  I++   +I + C A G P PS+ W +     D  +D LV   
Sbjct: 33  PLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT-- 90

Query: 243 IDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
           + P S        G L+IN   + +     G Y C A N+ G+ +S ++      +    
Sbjct: 91  MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNI-----VVRPST 137

Query: 300 LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV-FVSYDGALYFSAL 358
            +R P+  ++   + +  D               YF N + ED R  ++ Y    +   +
Sbjct: 138 FQRLPQ--SERVSQGLNGDL--------------YFSNVLPEDTREDYICYARFNHTQTI 181

Query: 359 EQ--------IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF--P 408
           +Q        I     +  + + +SDT                F   K     P TF  P
Sbjct: 182 QQKQPISLKVISVDELNDTIAANLSDT---------------EFYGAKSSKERPPTFLTP 226

Query: 409 EAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVE 461
           E  ++      G+ + LEC+A G P P   W +    LP N  ++ NF + L I +V   
Sbjct: 227 EGNESHKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKKTLQIIHVSEA 286

Query: 462 DQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
           D G Y C A N   A+  +++++++A P + +   +  +    + T  C A G P    S
Sbjct: 287 DSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPHNLVLSPGENGTLICRANGNPKPRIS 346

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQL 580
           W  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+     ++A +
Sbjct: 347 WLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQCNASNKYGYLLANAFV 400

Query: 581 RVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
            VL   P    R L S    Y        +  C    +P P   W K     GS     I
Sbjct: 401 NVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--GSALHEDI 454

Query: 638 F---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
           +   +NG L I    +D +G Y+C A N  GM +++  L +   P+ + + P    +   
Sbjct: 455 YVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRFIKQPEYAVVQRG 513

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             +   C    +  L    +W  +   + N +         ++D   L +++    D G 
Sbjct: 514 SKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDKDHLVVSDVKDEDGGT 566

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y C   +T+  +S    + V   P  P  +++      S  + WT G  N  PIT + I 
Sbjct: 567 YTCAANTTLDSVSASAVLRVVDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIE 626

Query: 815 ARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872
                +    W + +E              + + +  L P+  Y F+V+A N +G   PS
Sbjct: 627 YEDAMHEAGLWRHQAE----------VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPS 676

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DT 931
             S QY T A +P Q P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D 
Sbjct: 677 EASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDD 736

Query: 932 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 737 EWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 775


>gi|395845548|ref|XP_003795492.1| PREDICTED: protein sidekick-1 [Otolemur garnettii]
          Length = 2210

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 198/802 (24%), Positives = 329/802 (41%), Gaps = 67/802 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W   D       + L    S+
Sbjct: 99  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMHND-------SELTTYSSE 147

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      ++ +
Sbjct: 148 YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDIDQRKMIS 199

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+ P     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 200 QGHAAVLNLMPITSCPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTASDAGAYYV 257

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYP 427
              ++ +   +  PF  L +       +   P         +  AG  ++ LEC+A   P
Sbjct: 258 QAVNEKNGENKTSPFIYLSIARDIGAPETTAPTIVVPPGNRSVVAGSSEITLECIASARP 317

Query: 428 VP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVT 482
           V   S +W R G  +   +   +F R LTI N    D G Y+C A+   S+ E   +   
Sbjct: 318 VEELSVSWKRNGVRI--TSGLHSFGRRLTISNPTSADTGAYVCEATLRGSSFEPARARAF 375

Query: 483 ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           +SI   P FT  P +   ++ +  +   C+A GVP  T  W+++   ++     L++   
Sbjct: 376 LSIIEPPYFTAEPESRILVEVEETVDIICQAMGVPLPTLQWYKDAVSISK----LQNPRY 431

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +    L I+ L PE D  ++QC A N+     +   L V  + P F +RP   +T   
Sbjct: 432 KVLSSGGLRIQKLCPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRP--EDTTVT 488

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 657
           +G    + C    APKP   WK++ +I+ SG     R  + E+G L I+PV   D+G Y+
Sbjct: 489 DGMTAILRCEVSGAPKPAITWKRENHILASGSVQIPRFMLLESGGLQITPVFIQDAGNYT 548

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL-QLRCSAHTEELLDVAYIWT 716
           C A N  G   +   LIV +    +   PPK  +     +  LRC A  +  + ++YIW 
Sbjct: 549 CYAANSEGSLNASAMLIVWN--RTFIVRPPKDQVVIKGTMAMLRCGATHDPRITLSYIW- 605

Query: 717 HNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
               R  NM +    +  I +  DG LL I+     D G+Y C + S  G  S    + V
Sbjct: 606 ----RKDNMVITPSSSSRIVVEKDGSLL-ISQTWSGDIGDYTCNIISEGGNDSRTARLEV 660

Query: 775 EGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
              P  P  +       H  +  + W        PI +Y I+  +  NS W  V    +G
Sbjct: 661 IELPHSPQNLLASPNSSHSNTVMLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVG 718

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
            E+   T        + L P  TY+F+V A N++G G+ S+ + +   P + P   P  I
Sbjct: 719 PEMTGIT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNI 771

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRI 951
              G     + + W+P P  + N     Y + +R      E+Q   +    +  +    +
Sbjct: 772 VASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLV 828

Query: 952 PSEFYYTEYEVKVQAINDVGPG 973
                +T+YE++V A N  G G
Sbjct: 829 TDLIIWTQYEIQVAAYNGAGLG 850



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  VQV +   +  T+QW +G     P T Y I AR +    W      +  K
Sbjct: 1895 TEGSPGSPRDVQVTK-SASELTLQWAEGRAGNTPTTGYVIEARPSDEGLW-----DMFVK 1948

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R       S++N L    TYEF+V+A NE+GYGEPSSPS   +   + P+
Sbjct: 1949 DIPRSATSYTLSLDN-LRQGVTYEFRVVAVNEVGYGEPSSPSVAVSAQVEAPF 2000



 Score = 46.2 bits (108), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 8/144 (5%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            V   EV   S  +QW  G+    PI ++ +  R      W   S  +        +    
Sbjct: 1481 VPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPKGEWQTYSSSI--------SHEAT 1532

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            A I   L P+++Y+ ++ A N++G  + SS +    T  D P + P  +         + 
Sbjct: 1533 ACIVERLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1592

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK 927
            I W+P   E  N     Y+I++R+
Sbjct: 1593 IQWQPPRDESLNGLLQGYRIYYRE 1616



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 5/123 (4%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1669 YEVLMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVNPLSASQLEVTWDPPPPESQN 1727

Query: 916  APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
                 YKI +W   N  E  +E +K    +   +VR+ +   +T+Y V + A N  G GP
Sbjct: 1728 GNIQGYKIYYWEADNQNE--TEKMKVL-FLPEPMVRLKNLTSHTKYLVSISAFNAAGDGP 1784

Query: 975  ESE 977
            +S+
Sbjct: 1785 KSD 1787


>gi|397498087|ref|XP_003819824.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Pan paniscus]
          Length = 2159

 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 196/806 (24%), Positives = 323/806 (40%), Gaps = 75/806 (9%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W ++D       + L    S+
Sbjct: 49  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMRDD-------SELTTYSSE 97

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 98  YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVS 149

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 150 QGRAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTTSDAGAYYV 207

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECV 422
              ++ +   +  PF  L +      + +  P     T    P          +  LEC+
Sbjct: 208 QAVNEKNGENKTSPFIYLSIA-----RDVGTPETMAPTIVVPPGNRSVVAGSSETTLECI 262

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-- 478
           A   PV   S  W R G  +   +   +F R LTI N    D G Y+C A+   SA E  
Sbjct: 263 ASARPVEDLSVTWKRNGVRI--TSGLHSFGRRLTISNPTSADTGPYVCEAALRGSAFEPA 320

Query: 479 -SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            ++  + I   P FT  P +    + +  +   C+A GVP  T  W+++   ++     L
Sbjct: 321 RATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISR----L 376

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ++     +    L I+ L PE D  ++QC A N+     +   L V  + P F +RP++ 
Sbjct: 377 QNPRYKVLASGGLRIQKLRPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVD- 434

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDD 652
            T   +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D
Sbjct: 435 -TTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQD 493

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   +   L V +  S     P    +       L C A  +  + + 
Sbjct: 494 AGNYTCYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLR 552

Query: 713 YIWTHNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           Y+W  +     N+ L    T  I +  DG LL I+     D G+Y C + S  G  S   
Sbjct: 553 YVWKKD-----NVALTPSSTSRIVVEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMA 606

Query: 771 TVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
            + V   P  P  +       H  +  + W        PI +Y I+  +  NS W  V  
Sbjct: 607 RLEVIELPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHL 664

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +G E+   T        + L P  TY+F+V A NE+G G+ S+ + +   P + P   
Sbjct: 665 SNVGPEMTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAP 717

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIA 947
           P  I   G     + + W+P P  + N     Y + +R      E+Q   +    +  + 
Sbjct: 718 PKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVN 774

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPG 973
              +     +T+YE++V A N  G G
Sbjct: 775 YCLVTDLIIWTQYEIQVAAYNGAGLG 800



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K+
Sbjct: 1846 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1899

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A NE GYGEPS+PS   +   + P+
Sbjct: 1900 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 1950



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 16/144 (11%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            EV   S  +QW  G+    PI ++ +    + R  W +   ++S       VDR      
Sbjct: 1435 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR------ 1488

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
                  L P+++Y+ ++ A N++G  + SS +    T  D P + P  +         + 
Sbjct: 1489 ------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1542

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK 927
            I W+P   E  N     Y+I++R+
Sbjct: 1543 IQWQPPRDESLNGLLQGYRIYYRE 1566



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1619 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1677

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D++ ++E +K    +   VVR+ +   +T+Y V + A N  G GP 
Sbjct: 1678 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1735

Query: 976  SE 977
            S+
Sbjct: 1736 SD 1737



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 39/241 (16%)

Query: 757  CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 813
              V +    + T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +
Sbjct: 992  AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1051

Query: 814  IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 866
              +              IG E   V  Y    E   + +    L P++ Y F++   N +
Sbjct: 1052 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1100

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 923
            G    S  S    T    P  AP+ +         L + W PLP  + N    ++ Y+I 
Sbjct: 1101 GPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1160

Query: 924  FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 977
            +WR    ++ QS  + +     +   R+  EF       + EYE+++QA N VG GP SE
Sbjct: 1161 YWR----SDLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1211

Query: 978  V 978
            V
Sbjct: 1212 V 1212


>gi|332864595|ref|XP_518946.3| PREDICTED: protein sidekick-1 [Pan troglodytes]
          Length = 2213

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 196/806 (24%), Positives = 323/806 (40%), Gaps = 75/806 (9%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W ++D       + L    S+
Sbjct: 103 APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMRDD-------SELTTYSSE 151

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 152 YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVS 203

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 204 QGRAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTTSDAGAYYV 261

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECV 422
              ++ +   +  PF  L +      + +  P     T    P          +  LEC+
Sbjct: 262 QAVNEKNGENKTSPFIHLSIA-----RDVGTPETMAPTIVVPPGNRSVVAGSSETTLECI 316

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-- 478
           A   PV   S  W R G  +   +   +F R LTI N    D G Y+C A+   SA E  
Sbjct: 317 ASARPVEDLSVTWKRNGVRI--TSGLHSFGRRLTISNPTSADTGPYVCEAALRGSAFEPA 374

Query: 479 -SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            ++  + I   P FT  P +    + +  +   C+A GVP  T  W+++   ++     L
Sbjct: 375 RATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISR----L 430

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ++     +    L I+ L PE D  ++QC A N+     +   L V  + P F +RP++ 
Sbjct: 431 QNPRYKVLASGGLRIQKLRPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVD- 488

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDD 652
            T   +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D
Sbjct: 489 -TTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQD 547

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   +   L V +  S     P    +       L C A  +  + + 
Sbjct: 548 AGNYTCYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLR 606

Query: 713 YIWTHNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           Y+W  +     N+ L    T  I +  DG LL I+     D G+Y C + S  G  S   
Sbjct: 607 YVWKKD-----NVALTPSSTSRIVVEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMA 660

Query: 771 TVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
            + V   P  P  +       H  +  + W        PI +Y I+  +  NS W  V  
Sbjct: 661 RLEVIELPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHL 718

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +G E+   T        + L P  TY+F+V A NE+G G+ S+ + +   P + P   
Sbjct: 719 SNVGPEMTGIT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAP 771

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIA 947
           P  I   G     + + W+P P  + N     Y + +R      E+Q   +    +  + 
Sbjct: 772 PKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVN 828

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPG 973
              +     +T+YE++V A N  G G
Sbjct: 829 YCLVTDLIIWTQYEIQVAAYNGAGLG 854



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R       S++  L    TYEF+V+A NE GYGEPS+PS   +   + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 839
            V   EV   S  +QW  G+    PI ++ +    + R  W +   ++S       VDR  
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1542

Query: 840  GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
                      L P+++Y+ ++ A N++G  + SS +    T  D P + P  +       
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592

Query: 900  GDLSISWEPLPREKQNAPNIYYKIFWRK 927
              + I W+P   E  N     Y+I++R+
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRE 1620



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1673 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1731

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D++ ++E +K    +   VVR+ +   +T+Y V + A N  G GP 
Sbjct: 1732 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1789

Query: 976  SE 977
            S+
Sbjct: 1790 SD 1791



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 39/241 (16%)

Query: 757  CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 813
              V +    + T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +
Sbjct: 1046 AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1105

Query: 814  IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 866
              +              IG E   V  Y    E   + +    L P++ Y F++   N +
Sbjct: 1106 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1154

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 923
            G    S  S    T    P  AP+ +         L + W PLP  + N    ++ Y+I 
Sbjct: 1155 GPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1214

Query: 924  FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 977
            +WR    ++ QS  + +     +   R+  EF       + EYE+++QA N VG GP SE
Sbjct: 1215 YWR----SDLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1265

Query: 978  V 978
            V
Sbjct: 1266 V 1266


>gi|405958312|gb|EKC24451.1| Neuroglian [Crassostrea gigas]
          Length = 1178

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 234/514 (45%), Gaps = 23/514 (4%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G+  +L+C+  G P P   W +  + LP         + LTIPN+  ED G Y C  +N 
Sbjct: 45  GETFKLKCIFSGNPTPEVFWLKNKADLPDYYEVSLGGQELTIPNLTEEDAGPYECYGTNT 104

Query: 474 RSALE-SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
           +      +  I ++++P +     D      A  T+ C+A G P+   +WF NG  L   
Sbjct: 105 QGPRAFRNFVIRVESKPYWEEEPKDVETSVGASTTFICKAKGYPEPKIAWFVNGIKLEES 164

Query: 533 TLPLEDQDRYFIQD-NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
           T+P+   +R+   D N +T   LN + D  + QC A N     ++   L +L  +P+   
Sbjct: 165 TVPIVRSERFIKPDANNITFVQLN-KNDHMVLQCNASNIHGYVFADVYLNILEEEPAIIV 223

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 651
            P + E    EG ++ + C     P P   W+K+G  I +GGR +I +NGNL +  V   
Sbjct: 224 PPAK-ELKVAEGRDIELTCITSGKPDPIITWRKEGEQI-TGGRYQIQQNGNLHVQNVVLS 281

Query: 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE--ELL 709
           D+G Y+C A N +  DE+ G LIV    +   Q P  + + A  + +  CS  T+  E+ 
Sbjct: 282 DAGNYTCHAYNKYNFDEAWGILIV-RAKTRTVQKPGGLEVTAGSDAKFTCSGTTDFAEIK 340

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769
           ++   W  +   I   D    +    N     L I+     D+G Y CVV + +   +  
Sbjct: 341 NLRISWLKDNKPITTNDQRMTQ----NFQDNSLTISGTIARDSGTYTCVVSNGLDNATAG 396

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSE 828
             + V+  P  P  V ++   +T A I WT GA+N  PI ++ I   T+++   WF  + 
Sbjct: 397 AILTVKDKPDPPISVALITCGETEAEISWTKGASNNAPIQYFIIQYNTSFSPDEWFMGAS 456

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQ 887
           +V+           + S E  L PW  Y F+V+A N++G  EPS  +     T A +P +
Sbjct: 457 NVLA---------TQNSGEVKLTPWVEYNFRVLATNKIGISEPSYHTETVCKTNAARPSK 507

Query: 888 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
            P  +   G K   L I W P+P  + N     Y
Sbjct: 508 NPENVRTIGDKRNYLIIEWTPMPPIEHNGQQFKY 541


>gi|37537817|sp|Q90478.1|L1CA1_DANRE RecName: Full=Neural cell adhesion molecule L1.1; Short=N-CAM-L1.1;
           Short=NCAM-L1.1
 gi|1065714|emb|CAA61490.1| adhesion molecule L1.1 [Danio rerio]
          Length = 1197

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 185/737 (25%), Positives = 309/737 (41%), Gaps = 77/737 (10%)

Query: 269 RGSYHCKASNKFGSIISESVQLAFGFIGEF-----NLKRAPEIGNQNWGKAMFCDPPTNY 323
           +G+Y C A+N+ G+ +S  V L    +          +RA E+G       + C+PP + 
Sbjct: 42  QGTYRCYAANELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGE---SAVLRCNPPKSS 98

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGP 382
                +W    F + +  ++RV +S DG LYF+ L   D+  +Y+CN     +       
Sbjct: 99  VTPKIHWMDMQF-HHIPLNERVTISRDGNLYFANLIANDSRDDYTCNAHYINASIILPKE 157

Query: 383 FFPLKVFPHSNF-----QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRG 437
              + V P ++       +L  P     ++      G  + L+C+  G P P  +W R  
Sbjct: 158 PMSIYVTPSNSVVKNRRAKLHHPAGARSSY--LVLRGQTLTLQCIPEGLPTPEVHWDRID 215

Query: 438 SPLPRNAYFENFN-RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
           S L  N   + +N R L I NV   D GEY+C A N  ++++   T++++A P +T    
Sbjct: 216 SALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAPYWTRSPE 275

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRY 553
           +        +   C+A G+P    +W  NG       +P+   D   R  +    L +  
Sbjct: 276 EHLYAPGETVRLDCKADGIPAPNITWSING-------VPVSGTDVDPRRRVSSGKLILSN 328

Query: 554 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
           +    D A+YQC A N+  +   +  + V+ L P+    P E    A  G  V + C   
Sbjct: 329 VE-FSDTAVYQCEAVNKHGSILINTHVHVVEL-PAQILTPDERLYQATAGQTVMLDCRTF 386

Query: 614 AAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
            +P PK  W+   +I   S  +     NG+L IS VS +DS  Y+C+ +  +    +   
Sbjct: 387 GSPLPKIHWEILDSIPALSNAKISQTTNGSLKISNVSEEDSNRYTCSVSETNKSISADVE 446

Query: 673 LI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRI----GN 724
           ++    + GP      P  + +    +  L C    +  L    + W  +G +I     N
Sbjct: 447 VLNRTKIVGP------PQNLHVIRGSDAILHCKYTVDHNLKSPTVQWNKDGHKITASTSN 500

Query: 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
              +E+E        G L++ +    D G Y C V +T+   +    + V+  P  P  +
Sbjct: 501 DKYHEIE--------GSLKVLDVQMEDMGIYSCEVSTTLDSDTASGYITVQDKPDPPQSL 552

Query: 785 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
           ++ E  + S TI W     N  P+T Y I              E   G+  D    +K  
Sbjct: 553 KLSEKMERSVTISWMPSVENNSPVTEYVI--------------EMNEGETPDEGQWQKYR 598

Query: 845 SIENVLVPW------STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
           S+   +  W      S Y F++ A N +G   P+  S  Y+TPA KP   P  +      
Sbjct: 599 SVSQDIDSWRSICSYSKYHFQIRAVNSIGTSAPTESSLSYSTPAAKPDTNPENVMTLSTD 658

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958
              + ISW+ + R + N P   YK+FWR+  D    S       +V    + + +   + 
Sbjct: 659 PKSMIISWQEMDRRQFNGPGFQYKVFWRRAAD----SGAHWTESSVSNPPLMVNNTGTFV 714

Query: 959 EYEVKVQAINDVGPGPE 975
            +E+KVQA+ND+G  PE
Sbjct: 715 SFEIKVQAVNDLGAAPE 731



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 140/614 (22%), Positives = 228/614 (37%), Gaps = 101/614 (16%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRI----LTIPNVKVEDQGEYICR 469
           G+ VRL+C A G P P+  W+  G P+      +   R+    L + NV+  D   Y C 
Sbjct: 282 GETVRLDCKADGIPAPNITWSINGVPV-SGTDVDPRRRVSSGKLILSNVEFSDTAVYQCE 340

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLT--WTCEAFGVPDVTYSWFRNGE 527
           A N   ++  +  + +   P   +   ++     A  T    C  FG P     W    E
Sbjct: 341 AVNKHGSILINTHVHVVELPAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHW----E 396

Query: 528 LLNSETLP-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
           +L+S  +P L +       +  L I  ++ E D   Y C      K+   SA + VL  +
Sbjct: 397 ILDS--IPALSNAKISQTTNGSLKISNVS-EEDSNRYTCSVSETNKS--ISADVEVLN-R 450

Query: 587 PSFKKRPLESETYAGEGGNVTIFCN---PEAAPKPKFVWKKDGN-IIGSGGRRKIFE-NG 641
                 P     +   G +  + C          P   W KDG+ I  S    K  E  G
Sbjct: 451 TKIVGPP--QNLHVIRGSDAILHCKYTVDHNLKSPTVQWNKDGHKITASTSNDKYHEIEG 508

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +L +  V  +D GIYSC  +     D + G + V   P      PP+          L+ 
Sbjct: 509 SLKVLDVQMEDMGIYSCEVSTTLDSDTASGYITVQDKPD-----PPQ---------SLKL 554

Query: 702 SAHTEELLDVAY---IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
           S   E  + +++   +  ++ V    +++NE ETP    D G  +   +   D   +  +
Sbjct: 555 SEKMERSVTISWMPSVENNSPVTEYVIEMNEGETP----DEGQWQKYRSVSQDIDSWRSI 610

Query: 759 ------------VKSTVGKISTKTTVIVEGPPGLPG----GVQVVEVHKTSATIQW--TD 800
                       V S      T++++    P   P      V  +     S  I W   D
Sbjct: 611 CSYSKYHFQIRAVNSIGTSAPTESSLSYSTPAAKPDTNPENVMTLSTDPKSMIISWQEMD 670

Query: 801 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN--VLV----PWS 854
                 P   YK+  R                +  D      E+S+ N  ++V     + 
Sbjct: 671 RRQFNGPGFQYKVFWR----------------RAADSGAHWTESSVSNPPLMVNNTGTFV 714

Query: 855 TYEFKVIAGNELGYGEPSSPSPQY---NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           ++E KV A N+LG    ++P P      +  D P +APS +     +   + + W P+  
Sbjct: 715 SFEIKVQAVNDLG----AAPEPLTVIGYSGEDFPLEAPSALSVTELQKTSVMVRWSPVRP 770

Query: 912 EKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGI------AVVRIPSEF-YYTEYEVK 963
           E      + YKI+ R K    E     +   GN  +      A  +I S+  +Y++Y + 
Sbjct: 771 ESVRGHLLGYKIYLRMKGSQWETPGRAVSSSGNPTVIEVPADAAEKIVSDLQFYSDYTLT 830

Query: 964 VQAINDVGPGPESE 977
           + A N  G GP SE
Sbjct: 831 ITAFNSKGEGPHSE 844



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 143/381 (37%), Gaps = 43/381 (11%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           +TL C   G P P   W   D +   L  N    L + R+      L I++  + +D G 
Sbjct: 195 LTLQCIPEGLPTPEVHW---DRIDSALSPNRTKKLYNNRW------LQIDNVLESDD-GE 244

Query: 272 YHCKASNKFGSI---ISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTN-YPGVN 327
           Y C A N   S+    + +V+ A  +       R+PE      G+ +  D   +  P  N
Sbjct: 245 YVCTARNSENSVKHHYTVTVEAAPYWT------RSPEEHLYAPGETVRLDCKADGIPAPN 298

Query: 328 YYWARDYFP-NFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
             W+ +  P +  + D R  VS  G L  S +E  D   Y C   +K      +G     
Sbjct: 299 ITWSINGVPVSGTDVDPRRRVS-SGKLILSNVEFSDTAVYQCEAVNK------HGSIL-- 349

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS-PLPRNAY 445
            +  H +  +L      P        AG  V L+C  FG P+P  +W    S P   NA 
Sbjct: 350 -INTHVHVVELPAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAK 408

Query: 446 F-ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
             +  N  L I NV  ED   Y C  S    ++  S  + +        P  + H+   +
Sbjct: 409 ISQTTNGSLKISNVSEEDSNRYTCSVSETNKSI--SADVEVLNRTKIVGPPQNLHVIRGS 466

Query: 505 DLTWTCE---AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561
           D    C+      +   T  W ++G  + + T      D+Y   +  L +  +  E D  
Sbjct: 467 DAILHCKYTVDHNLKSPTVQWNKDGHKITAST----SNDKYHEIEGSLKVLDVQME-DMG 521

Query: 562 MYQCRAKNQLKTRYSSAQLRV 582
           +Y C     L +  +S  + V
Sbjct: 522 IYSCEVSTTLDSDTASGYITV 542



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 61/293 (20%)

Query: 516 PDVTYSWFRNGE-----LLNSETL-PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 569
           P  ++ W ++G+     L  S TL P    D +F Q                 Y+C A N
Sbjct: 7   PSPSFRWVKDGKQFGEVLSESGTLTPHPTMDLHFYQ---------------GTYRCYAAN 51

Query: 570 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW-KKDGN 627
           +L T  S+         PS  K   +       G +  + CN P+++  PK  W     +
Sbjct: 52  ELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKSSVTPKIHWMDMQFH 111

Query: 628 IIGSGGRRKIFENGNL----LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
            I    R  I  +GNL    LI+  SRDD   Y+C   N H ++ S    I+L       
Sbjct: 112 HIPLNERVTISRDGNLYFANLIANDSRDD---YTC---NAHYINAS----IILPKEPMSI 161

Query: 684 QLPPKITIAAHRNLQLR--CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN---ID 738
            + P  ++  +R  +L     A +  L+      T   +  G      L TP ++   ID
Sbjct: 162 YVTPSNSVVKNRRAKLHHPAGARSSYLVLRGQTLTLQCIPEG------LPTPEVHWDRID 215

Query: 739 GGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
             L             L+I N   +D GEY C  +++   +    TV VE  P
Sbjct: 216 SALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAP 268


>gi|1621283|gb|AAC50765.1| hBRAVO/Nr-CAM precursor [Homo sapiens]
          Length = 1299

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 229/885 (25%), Positives = 360/885 (40%), Gaps = 128/885 (14%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 15  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 59

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV                G LIIN   + + 
Sbjct: 60  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT----------MKPGTGTLIINIMSEGKA 109

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G+++   C PP   
Sbjct: 110 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 168

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 169 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 227

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 228 PISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 287

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 288 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 347

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 348 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 404

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 405 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 460

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLIS---------P 647
                   + C    +P P   W K     GS     I+   ENG L I          P
Sbjct: 461 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIKDATWIVKEIP 518

Query: 648 VSRDDS-GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 706
           V++ DS G Y+C A N  GM +++  L            P    +     +   C    +
Sbjct: 519 VAQKDSTGTYTCVARNKLGMAKNEVHL-----------QPEYAVVQRGSMVSFECKVKHD 567

Query: 707 ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
             L +  +W  +     N +L   E     +D   L + + S  D+G Y CV  +T+  +
Sbjct: 568 HTLSLTVLWLKD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSV 620

Query: 767 STKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816
           S    + V  P          P  P  +++ +    S  + WT G  N  PIT + I   
Sbjct: 621 SASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYE 680

Query: 817 TNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874
              +    W + +E              + + +  L P+  Y F+V+A N +G   PS  
Sbjct: 681 DAMHKPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEA 730

Query: 875 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEF 933
           S QY T A +P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+
Sbjct: 731 SEQYLTKASEPDKNPTAVEGLGSEPDNLEITWKPLNGFESNGPGLQYKVSWRQKDGDDEW 790

Query: 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            S  +    NV   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 791 TSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 830


>gi|119603836|gb|EAW83430.1| neuronal cell adhesion molecule, isoform CRA_d [Homo sapiens]
          Length = 1084

 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 200/755 (26%), Positives = 319/755 (42%), Gaps = 72/755 (9%)

Query: 256 GNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWG 312
           G LIIN   + +     G Y C A N+ G+ +S ++ +       +  ++   I  Q+ G
Sbjct: 6   GTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-G 64

Query: 313 KAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCN 369
           +++   C PP   P    +W  + F   + + +RV    +G LYFS  L +    +Y C 
Sbjct: 65  QSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICY 123

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
            +   + T +      +KV         K     P TF  PE   +      G+ + LEC
Sbjct: 124 ARFNHTQTIQQKQPISVKVI------SAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 177

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP+N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 178 IAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHT 237

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           +++ ++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 238 ISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPS 294

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 295 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQ 350

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS     I+   ENG L I    +D +G Y
Sbjct: 351 VIANRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTY 408

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +    ++  + P    +     +   C    +  L +  +W 
Sbjct: 409 TCVARNKLGMAKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWL 467

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +     N +L   E     +D   L + + S  D+G Y CV  +T+  +S    + V  
Sbjct: 468 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 520

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 521 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH 580

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N +G   PS  S QY T A +
Sbjct: 581 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 630

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 631 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 687

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+ND+G  PE  V
Sbjct: 688 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAV 720



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 91/408 (22%), Positives = 148/408 (36%), Gaps = 83/408 (20%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYV--QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267
           N ++L C A G P P   W KED +  ++R V         K F  +   + +++     
Sbjct: 171 NVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY--------KNFEKTLQIIHVSE----A 218

Query: 268 DRGSYHCKASNKFGSI---ISESVQLA-FGFIGEFNLKRAP-EIGNQNWGKAMFCDPPTN 322
           D G+Y C A N  G+I   IS  V+ A +      NL  +P E G       + C    N
Sbjct: 219 DSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG------TLICRANGN 272

Query: 323 YPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382
            P     W  +  P  +  D          + FS +++  +  Y CN             
Sbjct: 273 -PKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNA------------ 319

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPK------------AGDKVRLECVAFGYPVPS 430
                    SN       N F     E P+            A     L+C  FG P+P+
Sbjct: 320 ---------SNEYGYLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPT 370

Query: 431 YNWTR--RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ-- 486
             W +  +GS L  + Y  + N  L IP  + +  G Y C A N     ++ V + I+  
Sbjct: 371 IEWFKGAKGSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA 430

Query: 487 ----AEPNFTIPLTDKHMDNQADLTWTCEAF--GVPDVTYSWFRNGELLNSETLPLEDQD 540
                +P + +      +   + +++ C+        +T  W ++   L S+     D+D
Sbjct: 431 TWIVKQPEYAV------VQRGSMVSFECKVKHDHTLSLTVLWLKDNRELPSDERFTVDKD 484

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
              + D          + D   Y C A   L +  +SA L V+   P+
Sbjct: 485 HLVVAD--------VSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPT 524



 Score = 39.7 bits (91), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K  + +  N          I K
Sbjct: 734 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 786

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 787 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 844

Query: 894 GGGGKIGDLSISWEP 908
                +  L++ W+P
Sbjct: 845 IVNPTLDSLTLEWDP 859


>gi|196010355|ref|XP_002115042.1| hypothetical protein TRIADDRAFT_59150 [Trichoplax adhaerens]
 gi|190582425|gb|EDV22498.1| hypothetical protein TRIADDRAFT_59150 [Trichoplax adhaerens]
          Length = 1451

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 201/811 (24%), Positives = 342/811 (42%), Gaps = 69/811 (8%)

Query: 195 QPTDVVFDLSKR-SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL 253
           QP D V D +   S++  + L C A G  N +Y W  ++                 R  +
Sbjct: 18  QPLDYVGDKAISPSVMETVQLHCLARG-RNITYRWLHDNTAIRE----------TGRVRI 66

Query: 254 SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEI---GNQN 310
           + G+L++       D+G Y C A  + G  +S    L    +   +    P I   GN +
Sbjct: 67  ANGSLLVTSV-STSDQGRYQCIAEGREGISLSRFATLEILALPWMSSDSKPVIASEGNYS 125

Query: 311 WGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS-YDGALYFSALEQIDAGNYSCN 369
           +           +P +  YW +        + KRVFVS   G LYFS + ++D   Y C+
Sbjct: 126 YLPCGIVSTTKPWPSI-IYWTKKSTGQNPADGKRVFVSSATGNLYFSYVTKLDTDEYRCH 184

Query: 370 VQSKVSDTGRN--------GPFFPLKVFPHSN----FQQLKFPNNFPKTFPEAPKAGDKV 417
           + S+V     N          +  L V   SN      ++        T  +  +    V
Sbjct: 185 IISEVFHQYLNISLKQESQSIWKILNVVGESNRSSFAARILSEGAHRVTTMKRIEGISTV 244

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            L+C+A G P+P   W R G PLP + Y +EN  R L +  V  +D   Y C + N    
Sbjct: 245 VLDCIAVGRPLPLIYWDRSGGPLPFDRYNYENNGRRLILKTVTSKDSDRYRCHSRNVYG- 303

Query: 477 LESSVTISIQAE--PNFTIPLTDKHMD-NQADLTWTCEAFGVPDVTYSWFRNGELLNSET 533
            E +V   +Q E  P +  P+ D  +   Q++  W C A G   +TY WF NG       
Sbjct: 304 -EDTVIYKLQVERRPQWISPVRDVFVAVQQSEFRWPCIASG-SSITYLWFANGN------ 355

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
             +++  +Y +  N   +     + D  ++ C AKN      S  +L V++  P F    
Sbjct: 356 -EIKNNSKYSVFPNGNLVISSVTKDDSKIFTCIAKNNFDNIASYGRLNVISSSPKFISSV 414

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDD 652
           + ++T+     ++ + C     P+P   + +D N I +  R+ + ++NGNL +  V  +D
Sbjct: 415 M-AQTFFLHTTDI-LQCAVFGGPRPDMEYYRDTNYINTTNRKFEKYQNGNLKLHDVVLED 472

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
            G+Y C A N HG       ++V +          ++ I  + +  L CS   +  L + 
Sbjct: 473 QGVYRCMARNSHGESSKLINVVVRNQTILSINSSKEVLIRRYYSFALTCSVTKDARLLMQ 532

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK-----IS 767
             W  + V + N   + +   +I+    LL ++NA+F   G Y C+VK    +     I+
Sbjct: 533 LEWRKDDVNLSN--CSGIIIYHISPLVSLLTVSNATFNYTGIYSCIVKLYDDRFLNKYIA 590

Query: 768 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
            KT +IV   P     +   E+   S  I W  G+ N +P+  + ++ + N N+T F V+
Sbjct: 591 NKTKLIVVDIPDPVRNITYHELTAKSVFISWVPGSENFKPLIRFIVLYQVN-NNTSFKVA 649

Query: 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
              I   ++  T +   S      PW+ Y   V+A N +G  + S+   +  T    P  
Sbjct: 650 NPDISPNMN--TAKLNLS------PWNRYRITVVAENGVGRSK-SNQIIELQTKGSVPIY 700

Query: 888 APSRIGGGGGK-IGD-LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
            P+ +   G K + D +S+ W PLPRE    P I Y +  +++++   +   ++   +  
Sbjct: 701 LPNIVRATGSKSMPDVISVRWTPLPREYHCGPGIQYFLLHKERDNRGQKYTRIRLLSHYQ 760

Query: 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
             +  + S      YEV++Q  N  G G  S
Sbjct: 761 TMIHGLRSNII---YEVRMQTKNYYGEGNMS 788


>gi|345492248|ref|XP_001601654.2| PREDICTED: Down syndrome cell adhesion molecule-like protein
            CG42256-like [Nasonia vitripennis]
          Length = 1874

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 203/825 (24%), Positives = 343/825 (41%), Gaps = 97/825 (11%)

Query: 210  NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
            +D+ L+C A G P P + W+++  V  R V     P+     T   G+L+      V+D 
Sbjct: 251  SDVHLTCSAQGNPPPQFTWYRD--VNGRSV-----PVESYGRTQLWGDLMRIRRVDVQDA 303

Query: 270  GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKA--MFCDPPTNYPGVN 327
            G Y C A N+FG    +  +       + N +  P++   N G+   M C     +P  +
Sbjct: 304  GRYVCSARNQFGE---QQAETHLSVTSKLNARIQPQLQVVNSGQTATMNCTV-EGFPIES 359

Query: 328  YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
              W  D  P    +D R+ +     L   A+ + D G Y C V+S   +           
Sbjct: 360  VEWLHDGLPVLTAQDTRIRLPAPLVLMIEAIGRRDKGMYQCLVRSDKENAQATA------ 413

Query: 388  VFPHSNFQQLKFPNNFPK---TFPEAP-KAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
                    +L+  +  P+   TF E   + G  V L C A G P PS+ W   G PL   
Sbjct: 414  --------ELRLGDTVPELQYTFIEQTLRPGPPVSLRCSATGSPPPSFTWLLDGDPLNEI 465

Query: 444  A---------YFENFNRI---LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 491
            A         Y +    +   L I +   ED G Y C ASN  +++E    ++I   P  
Sbjct: 466  ASSHRYAIGQYVDQSGDVISHLNISSATTEDGGLYACVASNALASVEHKARLNIWGPPVM 525

Query: 492  TIPLT---DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548
            + PL+   +    ++A ++ +  +  +P + +SW ++GE L S +L +E+    F   + 
Sbjct: 526  S-PLSFPPNLQEGSRAQISCSITSGDLP-IHFSWLKDGEPLPS-SLNIEETRHDFY--SY 580

Query: 549  LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
            L  + ++  R    Y C A N+      +A+L ++ + P +   P +  T  G    + +
Sbjct: 581  LVFKDVS-SRHSGKYTCVATNKAAKVNQTAEL-LVKVPPQWTFEPQDVSTLLGN--PLYV 636

Query: 609  FCNPEAAPKPKFVWKK-------DGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 659
             CN    P P+  W +       D  ++   + GR  I  NG L  +       G Y C 
Sbjct: 637  HCNATGFPPPQITWLRGHARTSNDFQLLTELTDGRLTILPNGTLWTASAGPQHEGHYLCR 696

Query: 660  ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719
            A N  G   SK   + ++ P+ +E     +TI    ++ L C+   +  ++V   WTHN 
Sbjct: 697  ANNSIGSGLSKVVYVSVNEPARFEFQSKNVTIRRSESVVLDCTVIGDNPINVQ--WTHNN 754

Query: 720  VRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
             R+ + +++ L    +  D GL   L I  +   D+G Y C   +  G+      + V+ 
Sbjct: 755  NRL-DTNVHRLSISQVKTDNGLKSQLSIGLSDRQDSGVYRCTADNDYGRSEHFIYLAVQE 813

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI--------IARTNWN-STWFNVS 827
             P  P  ++V+E+   S  + W  G     PI  Y I        I   +W  S  +N+S
Sbjct: 814  RPDPPSALEVIEIGSRSIKLSWNKGFDGNSPIREYVIQYQPVSHSIMEDDWEPSKTYNIS 873

Query: 828  EHVIGK-----------EVDRY---TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
             H  G             V R+   +  +E ++   L P  TY+F+V A N +   EP+ 
Sbjct: 874  -HTPGSFFGIGANPGQNGVQRFEVTSEDQEIALVGGLHPAVTYKFRVFAINSIDTSEPTG 932

Query: 874  PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933
            P+    T  + P Q P  I       G+L ++WE  P E  N   + Y + W +++ +  
Sbjct: 933  PA-VAKTQEEAPTQPPQNIEVTSAGPGELIVTWEAPPIESCNGDLLGYIVTWSEQSSSTS 991

Query: 934  QSETLKEYGNVGIAV--VRIPSEFYYTEYEVKVQAINDVGPGPES 976
                 K     G A   V++     +T+Y++ ++A N +  GP S
Sbjct: 992  GVNQSKSLNVNGWATNKVQLTGLRNFTKYDISIRAFNSIASGPAS 1036



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 153/622 (24%), Positives = 248/622 (39%), Gaps = 61/622 (9%)

Query: 189 GPYFIKQP-TDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           GP F+ +P + +VF  +  S      LSC A G P PS  W       D+   + +  L 
Sbjct: 25  GPVFVLEPPSTLVFSNTTGS-----QLSCSAHGSPAPSVTWITSP---DQRSVSAVPGL- 75

Query: 248 DKRFTLSGGNL-----IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG---EFN 299
             R  L  G L     +  D R       Y C+ASN  G+++S  V L         E  
Sbjct: 76  --RQLLGNGTLYFPPFLAQDFRAEIHNARYRCRASNSVGTVLSREVTLRAVLTVPGYEVR 133

Query: 300 LKRAPEIGNQNWGKAMFCDPPTNYPG--VNYYWARD---YFPNFVEEDKRVFVSYDGALY 354
           + R+P +   N    + C+   +         W RD     P   +   R  V+  G L+
Sbjct: 134 VNRSPVVEGNN--AVLSCNAREDIKEHLTVTSWYRDESILLPGSTDTGGRFVVTSQGDLH 191

Query: 355 FSALEQIDA-GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413
                Q D    YSC  +  ++   R      L V   S+    K           + + 
Sbjct: 192 IKQARQEDGRATYSCLTRHSLTGETRKSEPASLPVTEPSSTMPPKLMQR--SQIAISAER 249

Query: 414 GDKVRLECVAFGYPVPSYNWTR----RGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
              V L C A G P P + W R    R  P+      + +  ++ I  V V+D G Y+C 
Sbjct: 250 DSDVHLTCSAQGNPPPQFTWYRDVNGRSVPVESYGRTQLWGDLMRIRRVDVQDAGRYVCS 309

Query: 470 ASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELL 529
           A N     ++   +S+ ++ N  I    + +++    T  C   G P  +  W  +G  +
Sbjct: 310 ARNQFGEQQAETHLSVTSKLNARIQPQLQVVNSGQTATMNCTVEGFPIESVEWLHDGLPV 369

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
               L  +D         VL I  +   RD  MYQC  ++  +   ++A+LR+    P  
Sbjct: 370 ----LTAQDTRIRLPAPLVLMIEAIG-RRDKGMYQCLVRSDKENAQATAELRLGDTVPEL 424

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIF----ENGN 642
           +   +E     G    V++ C+   +P P F W  DG   N I S  R  I     ++G+
Sbjct: 425 QYTFIEQTLRPGP--PVSLRCSATGSPPPSFTWLLDGDPLNEIASSHRYAIGQYVDQSGD 482

Query: 643 LL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL--PPKITIAAHRN 696
           ++    IS  + +D G+Y+C A+N     E K RL +  GP     L  PP +   +   
Sbjct: 483 VISHLNISSATTEDGGLYACVASNALASVEHKARLNIW-GPPVMSPLSFPPNLQEGSR-- 539

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756
            Q+ CS  + + L + + W  +G  + +  LN  ET +       L   + S   +G+Y 
Sbjct: 540 AQISCSITSGD-LPIHFSWLKDGEPLPS-SLNIEETRHDFYS--YLVFKDVSSRHSGKYT 595

Query: 757 CVVKSTVGKISTKTTVIVEGPP 778
           CV  +   K++    ++V+ PP
Sbjct: 596 CVATNKAAKVNQTAELLVKVPP 617


>gi|324499966|gb|ADY39998.1| Neuroglian [Ascaris suum]
          Length = 1341

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 205/846 (24%), Positives = 352/846 (41%), Gaps = 94/846 (11%)

Query: 185 KIPRGPYFIKQPTDVVFDLSKRSI----------LNDITLSCYAGGYPNPSYEWFKEDYV 234
           KIP  PYFI +P + +   +  S           L + TL C A G P P Y+W K    
Sbjct: 34  KIPTPPYFIHEPNEPIIYFTLESTQASNGQNLDYLKERTLRCKAEGNPAPVYKWKKNGKP 93

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294
            +      ++  S++   + G    +     V D G Y C+A+N  G+ +SE + L   +
Sbjct: 94  FN------LNMYSNRVAQVPGEGSFVFSKLTVADEGVYQCEATNDNGTAVSEKITLQQTW 147

Query: 295 IGEFNLKRAPEIGNQNWGKA--MFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-- 350
           I  F  +  PE+     G A    C PP + P    YW       F  +++  F S +  
Sbjct: 148 IRYF-PQAEPEVVRVELGDAYQRNCTPPESNPAARVYWI------FKGDEEGSFDSINSS 200

Query: 351 -------GALYFSALEQIDAGN---YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFP 400
                  G ++F  ++  D      Y+C  ++      + G  F L V   +  ++    
Sbjct: 201 HISTNELGTIFFHHVKDTDFKPNRYYTCTAENTKLKDYKFGSQFRLDV---TTNRRRSLS 257

Query: 401 NNFPKTFP----EAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRNA---YFENFNR 451
           +  P T       +P A  G   +L C   G+P P   W   G  +  +     FE + +
Sbjct: 258 SPIPPTEQYVNQSSPVALQGTIHKLHCFFSGFPEPKPEWKHNGVAIAEDDNRFTFEAYGK 317

Query: 452 ILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF-TIPLTDKHMDNQADLTWTC 510
            L   NV  E  G+Y C   N    L+    + ++A P + + P  +        + + C
Sbjct: 318 TLVF-NVSFETAGQYQCIFPNHLD-LDRKFDVVVEAAPYWPSGPPPNTQTSEGETVKFDC 375

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTI----RYLNPERDPAMYQCR 566
            A G P  T ++++NG  ++ +    +D DR+ I  +VLT+    + L+   D A+YQC+
Sbjct: 376 SASGKPTPTITFYKNGVEMSKQ----KDGDRWVIDGSVLTLYDVKKGLHGNGDNAVYQCK 431

Query: 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD- 625
           A+N+    +++  L +L  KP         E   G    VT+FC   A+P     W+   
Sbjct: 432 AENKHGYIWANFYLNLLAFKPQLVNDSGNVEAVIG--SKVTLFCRFFASPIADITWESSV 489

Query: 626 -----GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680
                 NII +  + +    G L+I+ V RD  G Y C   N +       +L+V     
Sbjct: 490 LPGITHNIIPADAQGE----GKLVINSVGRDAEGEYRCIGKNKYDTATGSTKLVVRDATR 545

Query: 681 Y--YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 738
              +E    K+    H  ++L C A  +E L V Y W  +   +    L  +       D
Sbjct: 546 LEPFESGLEKVLAGHH--IELPCEAQHDENLQVTYEWLVDAKPLSQQHL--MSGHYRLTD 601

Query: 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE----VHKTSA 794
              L I+N S  DA  Y CV ++ +  +     + V+  P       + +       TS 
Sbjct: 602 KNSLVISNPSRYDAANYTCVARTALDSVEKSIEIHVDDVPNPIHAAYIAKCDPTAQVTSI 661

Query: 795 TIQWTDGATNGRPI----THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK---EASIE 847
             ++ + A    PI      Y+I   T+  + W      V+   ++     +   + S+E
Sbjct: 662 KFEYMENADFSSPIKEIWAQYQIDEETD-GAVWLTHPHPVLADSLESVENNQRIVKGSLE 720

Query: 848 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
             + P+  Y F+V   N+ G G P++   +  TPA  P + P  +   G +  +L + W+
Sbjct: 721 VSMRPFGNYHFRVFGRNDFGDGAPTNVKGECKTPARVPDKNPEGVSAVGSRPENLIVFWK 780

Query: 908 PLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKE-YGNVGIAVVRIPSEFYYTEYEVKVQ 965
           P+PRE  N  + +Y I +R   ++ E++ E + + Y +     + + +E  +  YEV+VQ
Sbjct: 781 PMPREDWNGRDFHYIIRYRPSGSNGEWKEEKVDDPYSDR--HTIELSAEEPFRPYEVQVQ 838

Query: 966 AINDVG 971
           A+N+ G
Sbjct: 839 AVNEEG 844


>gi|350529383|ref|NP_001129635.2| L1 cell adhesion molecule precursor [Xenopus laevis]
          Length = 1246

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 200/790 (25%), Positives = 335/790 (42%), Gaps = 70/790 (8%)

Query: 210 NDITLSCYAGGYPNPSYEWFK--EDYVQDRLVANLIDPLSDKRFTLSGGNLIIN-DPRQV 266
           +DI L C A       Y W K  E +  +       D  S  R   SG  +I N +   +
Sbjct: 51  DDIVLKCEAKRNAKVKYTWKKDGETFAPE-------DGPSVNRKKDSGSIIISNGNGNAM 103

Query: 267 ED-RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
           +D +G Y C A+N+ G+ IS  + +      ++  +    I  +     +  C+PP +  
Sbjct: 104 KDFQGKYRCYATNELGTAISHEIHVITESTPKWQKEMIRPIEVEEGSSLILPCNPPKSAV 163

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPF 383
                W      + + +DKRV +  +G LYFS +++ D   +Y C+ Q   + T      
Sbjct: 164 PPRVIWMNSSLLH-ITQDKRVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQKEA 222

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKA------GDKVRLECVAFGYPVPSYNWT-RR 436
             +KV P +N  + + P       PE   +         ++LEC+A G P P   W    
Sbjct: 223 ISIKVRP-TNSVKFRRPEMM---LPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLT 278

Query: 437 GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
           GS    +  +++F + L I  V+ +D G+Y C A N +     + T+ +++ P +     
Sbjct: 279 GSTTNGHIQYDDFKKTLHIDKVQDDDDGDYQCTAKNTQGTATHTFTVVVESAPYWINKPM 338

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF---IQDNVLTIRY 553
           D       D+   CE  G P    +W  NG         L+D D Y    + +  L +  
Sbjct: 339 DGIYAPGEDIILHCEVGGKPKPKVTWKING-------ASLKDSDLYHNWKLSEGSLVLNN 391

Query: 554 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
           +    D ++ QC A+N+     ++A + V+ L P    +  E  +   E  NV++ C   
Sbjct: 392 MQ-LNDTSVVQCEARNKHGNLLANAFVYVVELPPQILTKNDEQYSVV-EKTNVSMDCKTF 449

Query: 614 AAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 671
            AP PK  W +D   N++    +     NG L I+ V ++  GIY CTA+N  G      
Sbjct: 450 GAPMPKIQWDRDQEDNLLALD-QFSFHTNGTLTITGVVKEHEGIYWCTASNNQGNVNISA 508

Query: 672 RLIVLHGPSYYEQLPPKITIAAHRNLQ--LRCSAHTEELLDVAYI-WTHNGVRIGNMDLN 728
            L V +       + P +   A +  +   +C+   +  +    I W  NG+ I      
Sbjct: 509 YLDVRNATKI---ISPPMEQRARKGGKAIFQCTVEFDPKMSSKIIDWKKNGLEIN----- 560

Query: 729 ELETPNIN---IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 785
             E P+ +   I+   L I+N    D G Y C+ +S +  +     ++V   P  P  ++
Sbjct: 561 --EDPDNDKYFIEDYTLSISNVQEGDQGMYTCLARSELDSVEQTAELVVIDLPESPSDLE 618

Query: 786 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
           +    +TS T+ WT G  N  PI  + I    +         E  +  E+ R  G    +
Sbjct: 619 LSNAQETSITLTWTPGNENNSPIEEFIIEFEED-------SFEPGVWHELTRVDGDMVTT 671

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
             N L P+  Y+F+VIA NE+G    S+PS +Y TP   P + P  + G G    ++ IS
Sbjct: 672 DLN-LSPYVNYQFRVIAVNEVGPSNGSNPSDRYRTPPSAPTKNPEEVKGEGTVPENMKIS 730

Query: 906 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
           W+PL     N P+  Y + WR+    +++ E  +         V +     +  YE+ VQ
Sbjct: 731 WKPLKGIDWNGPDFKYLVKWRRLGKDDWREEVAES------PPVIVTETSTFEPYEIIVQ 784

Query: 966 AINDVGPGPE 975
           ++ND+G   E
Sbjct: 785 SVNDLGRASE 794


>gi|148704862|gb|EDL36809.1| mCG125252 [Mus musculus]
          Length = 1254

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 214/833 (25%), Positives = 338/833 (40%), Gaps = 128/833 (15%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKE----DYVQDRLVANL 242
           P  + QP  +     K  I++   +I + C A G P PS+ W +     D  +D LV   
Sbjct: 28  PLDLVQPPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT-- 85

Query: 243 IDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299
           + P S        G L+IN   + +     G Y C A N+ G+ +S ++      +    
Sbjct: 86  MKPGS--------GTLVINIMSEGKAETYEGVYQCTARNERGAAVSNNI-----VVRPST 132

Query: 300 LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV-FVSYDGALYFSAL 358
            +R P+  ++   + +  D               YF N + ED R  ++ Y    +   +
Sbjct: 133 FQRLPQ--SERVSQGLNGDL--------------YFSNVLPEDTREDYICYARFNHTQTI 176

Query: 359 EQ--------IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF--P 408
           +Q        I     +  + + +SDT                F   K     P TF  P
Sbjct: 177 QQKQPISLKVISVDELNDTIAANLSDT---------------EFYGAKSSKERPPTFLTP 221

Query: 409 EAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVE 461
           E  ++      G+ + LEC+A G P P   W +    LP N  ++ NF + L I +V   
Sbjct: 222 EGNESHKEELRGNVLSLECIAEGLPTPIIYWIKEDGMLPANRTFYRNFKKTLQITHVSEA 281

Query: 462 DQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS 521
           D G Y C A N   A+  +++++++A P + +   +  +    + T  C A G P    S
Sbjct: 282 DSGNYQCIAKNALGAVHHTISVTVKAAPYWIVAPQNLVLSPGENGTLICRANGNPKPRIS 341

Query: 522 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQL 580
           W  NG  +    + L+D  R    D   TI + N  E   A+YQC A N+     ++A +
Sbjct: 342 WLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQCNASNKYGYLLANAFV 395

Query: 581 RVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKI 637
            VL   P    R L S    Y        +  C    +P P   W K     GS     I
Sbjct: 396 NVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEWFKGTK--GSALHEDI 449

Query: 638 F---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
           +   +NG L I    +D +G Y+C A N  GM +++  L +   P+   + P    +   
Sbjct: 450 YVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPTRIIKQPEYAVVQRG 508

Query: 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
             +   C    +  L    +W  +   + N +         + D   L +++    D G 
Sbjct: 509 SKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDKDHLVVSDVKDDDGGT 561

Query: 755 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 814
           Y C   +T+   S    + V   P  P  +++      S  + WT G  N  PIT     
Sbjct: 562 YTCTANTTLDSASASAVLRVVDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPIT----- 616

Query: 815 ARTNWNSTWFN-VSEHVIGKEVDRYTG---RKEASIENV-------LVPWSTYEFKVIAG 863
             + W   WF  V+E +I  E   +     R +A +          L P+  Y F+V+A 
Sbjct: 617 --SMW---WFGFVAEFIIEYEDAMHDAGLWRHQAEVSGTQTTAQLKLSPYVNYSFRVMAE 671

Query: 864 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923
           N +G   PS  S QY T A +P Q P  + G G +  +L I+W+PL   + N P + YK+
Sbjct: 672 NSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPGLQYKV 731

Query: 924 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
            WR+K+ D E+ S  +    NV   +V     F    Y +KVQA+NDVG  PE
Sbjct: 732 SWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPE 779


>gi|402900942|ref|XP_003913419.1| PREDICTED: protein sidekick-2-like, partial [Papio anubis]
          Length = 1482

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 205/811 (25%), Positives = 339/811 (41%), Gaps = 86/811 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 26  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 68

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 69  KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 124

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y 
Sbjct: 125 SHGEAAVIHAPRIASFPRPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY- 181

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA--PK-----AG-DKVRL 419
             VQ+     G N    P+ +      + +  P +  +T P +  PK     AG  +V L
Sbjct: 182 -YVQAVNDKNGDNKTSQPITL----AVENVGGPADLIRTPPSSSPPKNTRVVAGTSEVTL 236

Query: 420 ECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           ECVA   P+   +  W + G  L  +    + NR LTIPN    D G Y C A    S++
Sbjct: 237 ECVANARPLIKLHIIWKKDGMLL--SGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSV 294

Query: 478 ESSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSE 532
            S V    +S+   P F +   ++H+  + +  +   C A GVP  + +W+++  ++  E
Sbjct: 295 PSVVRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAVVEVE 353

Query: 533 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
            L    Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + 
Sbjct: 354 KLARFRQR----SDGGLQISGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRG 408

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPV 648
           PL+S     +G +V + C    AP+P   W+K   I+ SG     R    E+G+LLISP 
Sbjct: 409 PLDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPT 466

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
              D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  
Sbjct: 467 HISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVSHDPR 525

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIS 767
           + V YIW  +G  +G ++ N    P I +D  G L I+     D G Y C V S  G  S
Sbjct: 526 VTVRYIWEKDGATLG-VESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDS 580

Query: 768 TKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 825
               + V   P  P      +  V + +  + WT       P+  Y +    N N+ W  
Sbjct: 581 RSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLLRYVLEMSEN-NAPWT- 638

Query: 826 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
               V+   VD    +  +     LVP  +Y+F++ A N++G G+ S  + + + P + P
Sbjct: 639 ----VLLASVD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPP 691

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYG 942
              P  +   G     + I W+P P   QN     Y I +         +F++ T  +  
Sbjct: 692 TAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVN 751

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           N+ +  + I     +T YE++V A N  G G
Sbjct: 752 NLLLEDLII-----WTNYEIEVAAYNSAGLG 777



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 16/128 (12%)

Query: 858  FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA- 916
            F++   N +G   PS PS +  T    P  AP+ +         L + W PLP  + N  
Sbjct: 983  FRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGN 1042

Query: 917  -PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAIND 969
              ++ YKI   K + ++   +TL       +   R+  E+       +TEY V+VQA N 
Sbjct: 1043 PESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNA 1094

Query: 970  VGPGPESE 977
            +G GP S+
Sbjct: 1095 IGSGPWSQ 1102



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1006 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1063

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1064 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1115

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1116 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS 1174

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1175 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1203



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 17/173 (9%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R      W     +VS +   
Sbjct: 1316 PPSRPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASS 1374

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1375 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1422

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 945
                     + I W+P   +K N   + ++I +R+      +  TL+   N G
Sbjct: 1423 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPG 1475



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +      E V+     +
Sbjct: 1215 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1273

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+G+ +          D+P Q PSR  +   
Sbjct: 1274 YTATG-------LKPESVYLFRITAQTRKGWGDAAEALVVTTEKRDRP-QPPSRPVVQQE 1325

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              +   + +SWE  P     +P  YY I  R+     +   +     N    +V     F
Sbjct: 1326 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASSFIVDRLKPF 1383

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1384 --TSYKFRVKATNDIG 1397


>gi|49119255|gb|AAH73282.1| L1cam-a protein [Xenopus laevis]
          Length = 1225

 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 200/790 (25%), Positives = 335/790 (42%), Gaps = 70/790 (8%)

Query: 210 NDITLSCYAGGYPNPSYEWFK--EDYVQDRLVANLIDPLSDKRFTLSGGNLIIN-DPRQV 266
           +DI L C A       Y W K  E +  +       D  S  R   SG  +I N +   +
Sbjct: 30  DDIVLKCEAKRNAKVKYTWKKDGETFAPE-------DGPSVNRKKDSGSIIISNGNGNAM 82

Query: 267 ED-RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYP 324
           +D +G Y C A+N+ G+ IS  + +      ++  +    I  +     +  C+PP +  
Sbjct: 83  KDFQGKYRCYATNELGTAISHEIHVITESTPKWQKEMIRPIEVEEGSSLILPCNPPKSAV 142

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPF 383
                W      + + +DKRV +  +G LYFS +++ D   +Y C+ Q   + T      
Sbjct: 143 PPRVIWMNSSLLH-ITQDKRVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQKEA 201

Query: 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKA------GDKVRLECVAFGYPVPSYNWT-RR 436
             +KV P +N  + + P       PE   +         ++LEC+A G P P   W    
Sbjct: 202 ISIKVRP-TNSVKFRRPEMM---LPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLT 257

Query: 437 GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT 496
           GS    +  +++F + L I  V+ +D G+Y C A N +     + T+ +++ P +     
Sbjct: 258 GSTTNGHIQYDDFKKTLHIDKVQDDDDGDYQCTAKNTQGTATHTFTVVVESAPYWINKPM 317

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF---IQDNVLTIRY 553
           D       D+   CE  G P    +W  NG         L+D D Y    + +  L +  
Sbjct: 318 DGIYAPGEDIILHCEVGGKPKPKVTWKING-------ASLKDSDLYHNWKLSEGSLVLNN 370

Query: 554 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
           +    D ++ QC A+N+     ++A + V+ L P    +  E  +   E  NV++ C   
Sbjct: 371 MQ-LNDTSVVQCEARNKHGNLLANAFVYVVELPPQILTKNDEQYSVV-EKTNVSMDCKTF 428

Query: 614 AAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 671
            AP PK  W +D   N++    +     NG L I+ V ++  GIY CTA+N  G      
Sbjct: 429 GAPMPKIQWDRDQEDNLLALD-QFSFHTNGTLTITGVVKEHEGIYWCTASNNQGNVNISA 487

Query: 672 RLIVLHGPSYYEQLPPKITIAAHRNLQ--LRCSAHTEELLDVAYI-WTHNGVRIGNMDLN 728
            L V +       + P +   A +  +   +C+   +  +    I W  NG+ I      
Sbjct: 488 YLDVRNATKI---ISPPMEQRARKGGKAIFQCTVEFDPKMSSKIIDWKKNGLEIN----- 539

Query: 729 ELETPNIN---IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 785
             E P+ +   I+   L I+N    D G Y C+ +S +  +     ++V   P  P  ++
Sbjct: 540 --EDPDNDKYFIEDYTLSISNVQEGDQGMYTCLARSELDSVEQTAELVVIDLPESPSDLE 597

Query: 786 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
           +    +TS T+ WT G  N  PI  + I    +         E  +  E+ R  G    +
Sbjct: 598 LSNAQETSITLTWTPGNENNSPIEEFIIEFEED-------SFEPGVWHELTRVDGDMVTT 650

Query: 846 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
             N L P+  Y+F+VIA NE+G    S+PS +Y TP   P + P  + G G    ++ IS
Sbjct: 651 DLN-LSPYVNYQFRVIAVNEVGPSNGSNPSDRYRTPPSAPTKNPEEVKGEGTVPENMKIS 709

Query: 906 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965
           W+PL     N P+  Y + WR+    +++ E  +         V +     +  YE+ VQ
Sbjct: 710 WKPLKGIDWNGPDFKYLVKWRRLGKDDWREEVAES------PPVIVTETSTFEPYEIIVQ 763

Query: 966 AINDVGPGPE 975
           ++ND+G   E
Sbjct: 764 SVNDLGRASE 773


>gi|119607692|gb|EAW87286.1| sidekick homolog 1 (chicken), isoform CRA_a [Homo sapiens]
          Length = 2072

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 183/730 (25%), Positives = 298/730 (40%), Gaps = 56/730 (7%)

Query: 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP 324
           Q  D G Y C   N+ G+++    ++   ++G F      +  +Q     +   P T+YP
Sbjct: 19  QKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPITSYP 78

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
                W R+   + +    R+ ++ +  L   A    DAG Y     ++ +   +  PF 
Sbjct: 79  RPQVTWFREG--HKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFI 136

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECVAFGYPVP--SYNWTRR 436
            L +      + +  P     T    P          +  LEC+A   PV   S  W R 
Sbjct: 137 HLSIA-----RDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRN 191

Query: 437 GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVTISIQAEPNFTI 493
           G  +   +   +F R LTI N    D G Y+C A+   SA E   ++  + I   P FT 
Sbjct: 192 GVRI--TSGLHSFGRRLTISNPTSADTGPYVCEAALPGSAFEPARATAFLFIIEPPYFTA 249

Query: 494 -PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR 552
            P +    + +  +   C+A GVP  T  W+++   ++     L++     +    L I+
Sbjct: 250 EPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQ 305

Query: 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 612
            L PE D  ++QC A N+     +   L V  + P F +RP++  T   +G    + C  
Sbjct: 306 KLRPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVD--TTVTDGMTAILRCEV 362

Query: 613 EAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 668
             APKP   WK++ +I+ SG  R     + E+G L I+PV   D+G Y+C A N  G   
Sbjct: 363 SGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLN 422

Query: 669 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 728
           +   L V +  S     P    +       L C A  +  + + Y+W  +     N+ L 
Sbjct: 423 ASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKD-----NVALT 476

Query: 729 ELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 786
              T  I +  DG LL I+     D G+Y C + S  G  S    + V   P  P  + V
Sbjct: 477 PSSTSRIVVEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLV 535

Query: 787 V--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
                H  +  + W        PI +Y I+  +  NS W  V    +G E+   T     
Sbjct: 536 SPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT----- 588

Query: 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
              + L P  TY+F+V A NE+G G+ S+ + +   P + P   P  I   G     + +
Sbjct: 589 --VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMV 646

Query: 905 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963
            W+P P  + N     Y + +R      E+Q   +    +  +    +     +T+YE++
Sbjct: 647 QWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQ 703

Query: 964 VQAINDVGPG 973
           V A N  G G
Sbjct: 704 VAAYNGAGLG 713



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 166/453 (36%), Gaps = 63/453 (13%)

Query: 351 GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEA 410
           G     +L+++DAG Y C V++++             +    +  Q+ +  +F  T  + 
Sbjct: 11  GRYIIPSLQKLDAGFYRCVVRNRMG-----------ALLQRKSEVQVAYMGSFMDT--DQ 57

Query: 411 PKAGDKVRLECVAF----GYPVPSYNWTRRGSP-LPRNAYFENFNRILTIPNVKVEDQGE 465
            K   + R   +       YP P   W R G   +P N         L I      D G 
Sbjct: 58  RKTVSQGRAAILNLLPITSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGA 117

Query: 466 YICRASNDRSALESS---VTISIQAE--------PNFTIPLTDKH-MDNQADLTWTCEAF 513
           Y  +A N+++    +   + +SI  +        P   +P  ++  +   ++ T  C A 
Sbjct: 118 YYVQAVNEKNGENKTSPFIHLSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIAS 177

Query: 514 GVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK--- 568
             P  D++ +W RNG  + S    L    R     N  +        D   Y C A    
Sbjct: 178 ARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTGPYVCEAALPG 227

Query: 569 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
           +  +   ++A L ++   P F   P ES   A     V I C     P P   W KD   
Sbjct: 228 SAFEPARATAFLFIIE-PPYFTAEP-ESRISAEVEETVDIGCQAMGVPLPTLQWYKDAIS 285

Query: 629 IG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 686
           I      R K+  +G L I  +  +DSGI+ C A+N  G  ++   L V +    + Q P
Sbjct: 286 ISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRP 345

Query: 687 PKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELETPNINIDGGL 741
              T+       LRC         +      +I     VRI    L         ++ G 
Sbjct: 346 VDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---------LESGG 396

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           L+I      DAG Y C   +T G ++   T+ V
Sbjct: 397 LQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 429



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 28/222 (12%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            P F ++P D        +IL      C   G P P+  W +E+++       +      
Sbjct: 338 APVFTQRPVDTTVTDGMTAILR-----CEVSGAPKPAITWKRENHILASGSVRI------ 386

Query: 249 KRFTL--SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPE- 305
            RF L  SGG  I   P  ++D G+Y C A+N  GS+ + +    +      ++   PE 
Sbjct: 387 PRFMLLESGGLQIA--PVFIQDAGNYTCYAANTEGSLNASATLTVW---NRTSIVHPPED 441

Query: 306 -IGNQNWGKAMFCDPPTNYPGVN--YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQID 362
            +  +     + C   T+ P V+  Y W +D          R+ V  DG+L  S     D
Sbjct: 442 HVVIKGTTATLHCG-ATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSGD 500

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKV--FPHSNFQQLKFPNN 402
            G+YSC +   VS+ G +     L+V   PHS    L  PN+
Sbjct: 501 IGDYSCEI---VSEGGNDSRMARLEVIELPHSPQNLLVSPNS 539



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K+
Sbjct: 1759 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1812

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A NE GYGEPS+PS   +   + P+
Sbjct: 1813 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 1863



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 36/213 (16%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            EV   S  +QW  G+    PI ++ +    + R  W +   ++S       VDR      
Sbjct: 1348 EVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR------ 1401

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
                  L P+++Y+ ++ A N++G  + SS +    T  D P + P  +         + 
Sbjct: 1402 ------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1455

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGNVGIA 947
            I W+P   E  N     Y+I++R+              KN    ++E   +  +  V  +
Sbjct: 1456 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALRAELTAQSSFKTVNSS 1515

Query: 948  VVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
                  E      Y  YEV + A N +G  P S
Sbjct: 1516 STSTMCELTHLKKYRRYEVIMTAYNIIGESPAS 1548



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 17/182 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P   +       +   + + C A G P P+ +W+K+        A  I  L + 
Sbjct: 245 PYFTAEPESRI----SAEVEETVDIGCQAMGVPLPTLQWYKD--------AISISRLQNP 292

Query: 250 RF-TLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
           R+  L+ G L I   R  ED G + C ASN+ G I + +          F  +       
Sbjct: 293 RYKVLASGGLRIQKLRP-EDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTTVT 351

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARD--YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNY 366
                 + C+  +  P     W R+     +      R  +   G L  + +   DAGNY
Sbjct: 352 DGMTAILRCE-VSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNY 410

Query: 367 SC 368
           +C
Sbjct: 411 TC 412



 Score = 44.3 bits (103), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1532 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1590

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D++ ++E +K    +   VVR+ +   +T+Y V + A N  G GP+
Sbjct: 1591 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPK 1648

Query: 976  SE 977
            S+
Sbjct: 1649 SD 1650



 Score = 40.0 bits (92), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 41/233 (17%)

Query: 766  ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 822
            + T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +      
Sbjct: 914  LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 969

Query: 823  WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 875
                    IG E   V  Y    E   + +    L P++ Y F++   N +G   P SPS
Sbjct: 970  -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1021

Query: 876  PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 931
             +   T    P  AP+ +         L + W PLP  + N    ++ Y+I +WR    +
Sbjct: 1022 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1077

Query: 932  EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEV 978
            + QS  + +     +   R+  EF       + EYE+++QA N VG GP SEV
Sbjct: 1078 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEV 1125


>gi|348568334|ref|XP_003469953.1| PREDICTED: protein sidekick-1 [Cavia porcellus]
          Length = 2115

 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 192/804 (23%), Positives = 321/804 (39%), Gaps = 71/804 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W   D       + L    ++
Sbjct: 7   APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMHND-------SELTTYSTE 55

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +S          Q  D G Y C   N+ G+++    ++   ++G F      ++ +
Sbjct: 56  YKYIISS--------LQKHDAGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDTDQRKMVS 107

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P  + P     W R+   + +    R+ ++ +  L   +    DAG Y  
Sbjct: 108 QGHAAVLNLLPINSCPRPQVTWFREG--HKIIPSNRIAITLENQLVILSTTASDAGAYYV 165

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECV 422
              ++ +   +  PF  L +      + +  P         AP          +  LEC+
Sbjct: 166 QAVNERNGENKTSPFIHLSIA-----RDMGTPEAMAPVIVVAPGNRSVVAGSSETTLECI 220

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-- 478
           A   PV   S +W R G  L   +   +F R LTI N    D G Y+C A+   SA E  
Sbjct: 221 ASARPVEELSVHWKRNGVRL--TSGLHSFGRRLTISNPTSTDTGLYVCEATLRGSAFEPA 278

Query: 479 -SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            +   +SI   P FT  P +   ++ +  +   C A GVP  T  W+++   +N     L
Sbjct: 279 RAKAFLSIIEPPYFTAEPESRILVEVEETVDIMCRAMGVPLPTLQWYKDAVSINK----L 334

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ++     +    L I+ L+PE D  ++QC A N+     +   L V  + P+F + P  +
Sbjct: 335 QNPRYQVLPSGGLRIQKLHPE-DSGIFQCFASNEGGEIQTHTYLDVTNVAPTFIQCP--A 391

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDD 652
           +T   +G    + C    APKP   WK+  NI+ SG  R     + E+G L I+PV   D
Sbjct: 392 DTTVTDGMTAVLRCEVSGAPKPAVTWKRGNNILASGSVRIPRFMLLESGGLQITPVFIQD 451

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   +   L V +  S       ++ I       L C A  +  + + 
Sbjct: 452 AGNYTCYALNTEGSLNASATLTVWNRTSIIHPPEDRVVIKG-TTAALHCGATHDPRISLR 510

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
           Y+W  +   I     + +    +  DG LL I+     D G+Y C + S  G  S    +
Sbjct: 511 YVWKKDNAVITPSSSSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRTARL 566

Query: 773 IVEGPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 830
            V   P  P  +   +   H  +  + W        P+ HY I+  +  NS W  V    
Sbjct: 567 EVIELPHPPQNLLASLSPSHSHAVVLSWVRPFDGNSPVLHY-IVELSENNSPW-KVHLSD 624

Query: 831 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
           +G E+   T        + L P  TY+F+V A N++G G+ S+ + +   P + P   P 
Sbjct: 625 VGPEMTGIT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPK 677

Query: 891 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVV 949
            I   G     + + W+P P  + N     Y + +R      E Q   +    +  +   
Sbjct: 678 NIVASGRTNQSIMVQWQPPPETEHNGVLHGYILRYRLAGLPGEHQQRNIT---SPEVNYC 734

Query: 950 RIPSEFYYTEYEVKVQAINDVGPG 973
            +     +T+YE++V A N  G G
Sbjct: 735 LVTDLIIWTQYEIQVAAYNGAGLG 758



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 127/547 (23%), Positives = 216/547 (39%), Gaps = 77/547 (14%)

Query: 415 DKVRLECVAFGYPVPSYNWTRRGSPL-----PRNAYFENFNRILTIPNVKVEDQGEYICR 469
           + V + C A G P+P+  W +    +     PR     +    L I  +  ED G + C 
Sbjct: 306 ETVDIMCRAMGVPLPTLQWYKDAVSINKLQNPRYQVLPSGG--LRIQKLHPEDSGIFQCF 363

Query: 470 ASNDRSALESSVTISI-QAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
           ASN+   +++   + +    P F     D  + +       CE  G P    +W R   +
Sbjct: 364 ASNEGGEIQTHTYLDVTNVAPTFIQCPADTTVTDGMTAVLRCEVSGAPKPAVTWKRGNNI 423

Query: 529 LNSETLPLEDQDRYFIQDN---VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           L S ++ +    R+ + ++    +T  ++   +D   Y C A N   +  +SA L V   
Sbjct: 424 LASGSVRI---PRFMLLESGGLQITPVFI---QDAGNYTCYALNTEGSLNASATLTVWN- 476

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNII--GSGGRRKIFENG 641
           + S    P   +    +G    + C     P+   ++VWKKD  +I   S  R  + ++G
Sbjct: 477 RTSIIHPP--EDRVVIKGTTAALHCGATHDPRISLRYVWKKDNAVITPSSSSRIVVEKDG 534

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701
           +LLIS     D G Y+C   +  G D    RL V+  P      PP+       NL    
Sbjct: 535 SLLISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPH-----PPQ-------NLLASL 582

Query: 702 SAHTEELLDVAYIWTHNG---VRIGNMDLNELETP-NINI-DGG--LLEITNASFADAGE 754
           S      + ++++   +G   V    ++L+E  +P  +++ D G  +  IT +    A  
Sbjct: 583 SPSHSHAVVLSWVRPFDGNSPVLHYIVELSENNSPWKVHLSDVGPEMTGITVSGLTPART 642

Query: 755 YE---CVVKST-VGKISTKTTVIV--EGPPGLPGGVQVVEVHKT--SATIQWT------- 799
           Y+   C V     G+ ST+T+ ++  E PP  P    +V   +T  S  +QW        
Sbjct: 643 YQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPK-NIVASGRTNQSIMVQWQPPPETEH 701

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS--IENVLVPWSTYE 857
           +G  +G  I  Y++                + G+   R     E +  +   L+ W+ YE
Sbjct: 702 NGVLHGY-ILRYRLAG--------------LPGEHQQRNITSPEVNYCLVTDLIIWTQYE 746

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
            +V A N  G G  S    +Y T    P   P  +         +   W P P++  N  
Sbjct: 747 IQVAAYNGAGLGVFSRAVAEY-TLQGVPTAPPQNVQAEAVNSTTVQFLWNPPPQQFINGI 805

Query: 918 NIYYKIF 924
           N  YK+ 
Sbjct: 806 NQGYKLL 812



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G+    P T + I AR +    W      +  K+
Sbjct: 1804 EGSPGSPKDVLVTK-STSDLTLQWTEGSPGNSPTTGFVIEARPSDEGLW-----DMFVKD 1857

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A NE GYGEPS PSP  +   + P+
Sbjct: 1858 IPRSATSYTISLDK-LRQGVTYEFRVVAANEAGYGEPSRPSPAVSAQVEAPF 1908



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 778  PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVI 831
            P  P  +QV   EV   S  +QW  G+    PI ++ +  R      W +   ++S    
Sbjct: 1381 PAPPRELQVPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHDAT 1440

Query: 832  GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
               V+R            L P+++Y+ ++ A N++G    SS +    T  D P + P  
Sbjct: 1441 ACAVER------------LRPFTSYKLRLKATNDIGDSNFSSETEAVTTLQDVPGEPPGS 1488

Query: 892  IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            +         + I W+P   E  N     Y+I++R+
Sbjct: 1489 VSATPHTTSSVLIQWQPPRDESLNGLLQGYRIYYRE 1524



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  I         L ++W+P P E QN
Sbjct: 1577 YEVIMTAYNVIGESPASAPVEVFVGEA-APAMAPQNIQVTPLTASQLEVTWDPPPPESQN 1635

Query: 916  APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
                 YKI +W   N  E  +E +K    +    V++ +   +T+Y V + A N  G GP
Sbjct: 1636 GNIQGYKIYYWEAGNRNE--TEKMKVL-FLPEPTVKLKNLTSHTKYLVSISAFNAAGDGP 1692

Query: 975  ESE 977
             S+
Sbjct: 1693 RSD 1695



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 18/233 (7%)

Query: 754  EYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPIT 809
            E   V  + +G ++T T  I  G PP LPG    + +  +   SAT+Q+  G      I+
Sbjct: 948  EVAAVTAAGMGLVTTST--ISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSIS 1005

Query: 810  HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
             + +  +        +  E V   E +     +   I N L P++ Y F++   N +G  
Sbjct: 1006 RWIVEGQVG---AIGDEEEWVCLYEEENEPDAQMLEIPN-LTPYTHYRFRMRQVNIVGPS 1061

Query: 870  EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWR 926
              S  S    T    P  AP+ I         L + W PLP  + N    ++ Y++ +WR
Sbjct: 1062 PFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWR 1121

Query: 927  KKNDTEFQSETLKEYGNVGIAV-VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                 +  S  L +  N  +   + I     +TEYE+++QA N +G GP SEV
Sbjct: 1122 ----LDLPSSALAQVVNDRLERELTIEELEEWTEYELQMQAFNAIGAGPWSEV 1170


>gi|426355367|ref|XP_004045095.1| PREDICTED: protein sidekick-1, partial [Gorilla gorilla gorilla]
          Length = 2273

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 194/806 (24%), Positives = 321/806 (39%), Gaps = 75/806 (9%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W  +D       + L    S+
Sbjct: 163 APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMHDD-------SELTTYSSE 211

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q +D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 212 YKYIIPS--------LQKQDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVS 263

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    D G Y  
Sbjct: 264 QGRAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTTGDTGAYYV 321

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECV 422
              ++ +   +  PF  L +      + +  P     T    P          +  LEC+
Sbjct: 322 QAVNEKNGENKTSPFIHLSIA-----RDVGTPETMAPTIVVPPGNRSVVAGSSETTLECI 376

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-- 478
           A   PV   S  W R G  +   +   +F R LTI N    D G Y+C A+   S  E  
Sbjct: 377 ASARPVEDLSVTWKRNGVRI--TSGLHSFGRRLTISNPTSADTGPYVCEAALRGSTFEPA 434

Query: 479 -SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            ++  + I   P FT  P +    + +  +   C+A GVP  T  W+++   ++     L
Sbjct: 435 RATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISR----L 490

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ++     +    L I+ L PE D  ++QC A N+     +   L V  + P F +RP++ 
Sbjct: 491 QNPRYKVLTSGGLRIQKLRPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVD- 548

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDD 652
            T   +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D
Sbjct: 549 -TTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQD 607

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   +   L V +  S     P    +       L C A  +  + + 
Sbjct: 608 AGNYTCYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLR 666

Query: 713 YIWTHNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           Y+W  +     N+ L    T  I +  DG LL I+     D G+Y C + S  G  S   
Sbjct: 667 YVWKKD-----NVALTPSSTSRIVVEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMA 720

Query: 771 TVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
            + V   P  P  +       H  +  + W        PI +Y I+  +  NS W  V  
Sbjct: 721 RLEVIELPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHL 778

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +G E+   T        + L P  TY+F+V A NE+G G+ S+ + +   P + P   
Sbjct: 779 SNVGPEMTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAP 831

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIA 947
           P  I   G     + + W+P P  + N     Y + +R      E+Q   +    +  + 
Sbjct: 832 PKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVN 888

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPG 973
              +     +T+YE++V A N  G G
Sbjct: 889 YCLVTDLIIWTQYEIQVAAYNGAGLG 914



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K
Sbjct: 1959 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 2012

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R       S++  L    TYEF+V+A NE GYGEPS+PS   +   + P+
Sbjct: 2013 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2064



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 36/217 (16%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 839
            V   EV   S  +QW  G+    PI ++ +    + R  W +   ++S       VDR  
Sbjct: 1545 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1602

Query: 840  GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
                      L P+++Y+ ++ A N++G  + SS +    T  D P + P  +       
Sbjct: 1603 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1652

Query: 900  GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLKE-------------YGN 943
              + I W+P   E  N     Y+I++R+   +  +  +++TLK              +  
Sbjct: 1653 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSTFKT 1712

Query: 944  VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
            V  +      E      Y  YEV + A N +G  P S
Sbjct: 1713 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPAS 1749



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L I+W+P P E QN
Sbjct: 1733 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEITWDPPPPESQN 1791

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D++ ++E +K    +   VVR+ +   +T+Y V + A N  G GP 
Sbjct: 1792 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1849

Query: 976  SE 977
            S+
Sbjct: 1850 SD 1851



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 39/241 (16%)

Query: 757  CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 813
              V +    + T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +
Sbjct: 1106 AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1165

Query: 814  IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 866
              +              IG E   V  Y    E   + +    L P++ Y F++   N +
Sbjct: 1166 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1214

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 923
            G    S  S    T    P  AP+ +         L + W PLP  + N    ++ Y+I 
Sbjct: 1215 GPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1274

Query: 924  FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 977
            +WR    ++ QS  + +     +   R+  EF       + EYE+++QA N VG GP SE
Sbjct: 1275 YWR----SDLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1325

Query: 978  V 978
            V
Sbjct: 1326 V 1326


>gi|355560430|gb|EHH17116.1| Protein sidekick-1, partial [Macaca mulatta]
          Length = 2035

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 197/802 (24%), Positives = 320/802 (39%), Gaps = 67/802 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W ++                 
Sbjct: 5   APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMRD---------------GR 45

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
           +  T S     I    Q  D G Y C   N+ G+++    ++   ++G F      +   
Sbjct: 46  ELTTYSSEYKYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFTDTDQRKTVP 105

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 106 QGRAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTASDAGAYYV 163

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYP 427
              ++ +   +  PF  L +       +   P         +  AG  +  LEC+A   P
Sbjct: 164 QAVNEKNGENKTSPFIHLSIARDIGTPETTAPTIVVPPGNRSVVAGSSETTLECIASARP 223

Query: 428 VP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVT 482
           V   S  W R G  +   +   +F R LTI N    D G Y+C A+   SA E   +   
Sbjct: 224 VEDLSVTWKRNGVRI--TSGLHSFGRRLTISNPTSADTGLYVCEAALLGSAFEPARAKAF 281

Query: 483 ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           + I   P FT  P +    + +  +   C+A GVP  T  W+++   ++     L++   
Sbjct: 282 LFITEPPYFTAEPESRISAEVEETVDIRCQAMGVPLPTLQWYKDAISISR----LQNPRY 337

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +    L I+ L PE D  ++QC A N+     +   L V  + P F +RP  ++T   
Sbjct: 338 KVLASGGLRIQKLRPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRP--ADTTVT 394

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 657
           +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D+G Y+
Sbjct: 395 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 454

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWT 716
           C A N  G   +   L V +  S     PP+  +     +  L C A  +  + + Y+W 
Sbjct: 455 CYAANTEGSLNASATLTVWNRTSIVH--PPEDHVVIKGTMATLHCGATHDPRVSLRYVWK 512

Query: 717 HNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
            +     N+ L    T  I +  DG LL I+     D G+Y C + S  G  S    + V
Sbjct: 513 KD-----NVALTPSSTSRIVVEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRMARLEV 566

Query: 775 EGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
              P  P  +       H  +  + W        PI +Y I+  +  NS W  V    +G
Sbjct: 567 IELPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVG 624

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
            E+   T        + L P  TY+F+V A NE+G G+ S+ + +   P + P   P  I
Sbjct: 625 PEMTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNI 677

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRI 951
              G     + + W+P P  + N     Y + +R      E+Q   +    +  +    +
Sbjct: 678 VASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLV 734

Query: 952 PSEFYYTEYEVKVQAINDVGPG 973
                +T+YE++V A N  G G
Sbjct: 735 TDLIIWTQYEIQVAAYNGAGLG 756



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K+
Sbjct: 1802 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1855

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A NE+GYGEPSSPS   +   + P+
Sbjct: 1856 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEVGYGEPSSPSTAVSAQVEAPF 1906



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 36/213 (16%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            EV   S  +QW  G+    PI ++ +    + R  W +   ++S       VDR      
Sbjct: 1391 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACIVDR------ 1444

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
                  L P+++Y+ ++ A N++G  + SS +    T  D P + P  +         + 
Sbjct: 1445 ------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1498

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIA 947
            I W+P   E  N     Y+I++R+   +  +  +++TLK              +  V  +
Sbjct: 1499 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTVNSS 1558

Query: 948  VVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
                  E      Y  YEV + A N +G  P S
Sbjct: 1559 STSTMCELTHLKKYRRYEVIMTAYNIIGESPAS 1591



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 11/126 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1575 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1633

Query: 916  APNIYYKIFW---RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI++     +NDTE  +   L E       VVR+ +   +TEY V + A N  G
Sbjct: 1634 GNIQGYKIYYWEADSQNDTEKMKVLFLPE------PVVRLKNLTSHTEYLVSISAFNAAG 1687

Query: 972  PGPESE 977
             GP S+
Sbjct: 1688 DGPRSD 1693



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 95/230 (41%), Gaps = 39/230 (16%)

Query: 768  TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +        
Sbjct: 959  TSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG------ 1012

Query: 825  NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                  IG E   V  Y    E   + +    L P++ Y F++   N +G    S  S  
Sbjct: 1013 -----AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSSRV 1067

Query: 878  YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 934
              T    P  AP+ +         L + W PLP  + N    ++ Y+I +WR    ++ Q
Sbjct: 1068 IQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SDLQ 1123

Query: 935  SETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEV 978
            S  L +     +   R+  EF       + EYE+++QA N VG GP SEV
Sbjct: 1124 SSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEV 1168


>gi|296192587|ref|XP_002744137.1| PREDICTED: protein sidekick-1 [Callithrix jacchus]
          Length = 2093

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 196/810 (24%), Positives = 319/810 (39%), Gaps = 83/810 (10%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W  +D       + L    S+
Sbjct: 29  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMHDD-------SELTTYSSE 77

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 78  YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEVHVAYMGNFMDTDQRKTVS 129

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    D G Y  
Sbjct: 130 QGHAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTPSDTGAYYV 187

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECV 422
              ++ +   +  PF  L +      + +  P     T    P          +  LEC+
Sbjct: 188 QAVNEKNGENKTSPFIHLSIA-----RDIGTPETMAPTIVVPPGNRSVVAGSSETTLECI 242

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-- 478
           A   PV   S  W R G  +   +   NF R LTI N    D G Y+C A+   SA E  
Sbjct: 243 ASARPVEELSVTWKRNGVRI--TSGLHNFGRRLTISNPTSADTGLYVCEAALRGSAFEPA 300

Query: 479 -SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            +   + I   P FT  P +    + +  +   C A GVP  T  W+++   ++     L
Sbjct: 301 RAKAFLFIIEPPYFTAEPESRISGEVEETVDIGCRAMGVPLPTLQWYKDAVSISK----L 356

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ++     +    L I+ L+PE D  ++QC A N+     +   L V  + P F ++P  +
Sbjct: 357 QNPRYKVLASGGLRIQKLHPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQQP--A 413

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDD 652
           +T   +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D
Sbjct: 414 DTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQITPVFIQD 473

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   +   L V +  S     P    +       LRC A  +  + + 
Sbjct: 474 AGNYTCYAANTEGSLNASAMLTVWNRTSIVHP-PEDHVVIKGTTATLRCGAMHDPRVSLR 532

Query: 713 YIWTHNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           Y+W  +     N+ L    T  I +  DG LL I+     D G+Y C + S  G  S   
Sbjct: 533 YVWKKD-----NVVLTPSSTSRIMVEKDGSLL-ISQTWSGDIGDYTCDIVSEGGNDSRMA 586

Query: 771 TVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW----F 824
            + V   P  P  +       H  +  + W        PI +Y I+  +  NS W     
Sbjct: 587 RLEVIELPHSPQNLLASPNSSHSHAVALSWVRPFDGNSPILYY-IVELSENNSPWKVHLS 645

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           NV   + G  V              L P  TY+F+V A NE+G G+ S+ + +   P + 
Sbjct: 646 NVDPEMTGVTVSG------------LTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEP 693

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P   P  I   G     + + W+P P  + N     Y + +R      E+Q   +    +
Sbjct: 694 PSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---S 750

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
             +    +     +T+YE++V A N  G G
Sbjct: 751 PEVNYCLVMDLIIWTQYEIQVAAYNGAGLG 780



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G     P T Y I AR +    W      +  K+
Sbjct: 1826 EGSPGSPRDVLVTK-SASELTLQWTEGHAGDTPTTGYVIEARPSDEGLW-----DMFVKD 1879

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
            + R       S++  L    TYEF+V+A NE GYGEPSSPS
Sbjct: 1880 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSSPS 1919



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 8/144 (5%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            V   EV   S  +QW  G+    PI ++ +  R      W   S  +        +    
Sbjct: 1411 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTFSSSI--------SHEAT 1462

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
            A I   L P+++Y+ ++ A N++G  + SS +    T  D P + P  +         + 
Sbjct: 1463 ACIVERLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1522

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK 927
            I W+P   E  N     Y+I++R+
Sbjct: 1523 IQWQPPRDESLNGLLQGYRIYYRE 1546



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1599 YEVIMTAYNIIGESPASTPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1657

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D++ ++E  K    +   VVR+ +   +T+Y V + A N  G GP 
Sbjct: 1658 GNIQGYKIYYWEA-DSQNETEKTKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1715

Query: 976  SE 977
            S+
Sbjct: 1716 SD 1717



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 39/232 (16%)

Query: 766  ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 822
            + T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +      
Sbjct: 981  LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1036

Query: 823  WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 875
                    IG E   V  Y    E   + +    L P++ Y F++   N +G    S  S
Sbjct: 1037 -------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSS 1089

Query: 876  PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 932
                T    P  AP+ +         L + W PLP  + N    ++ Y+I +WR    ++
Sbjct: 1090 RVIQTLQAPPDVAPASVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SD 1145

Query: 933  FQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEV 978
             QS  L +     +   R+  EF       + EYE+++QA N VG GP SEV
Sbjct: 1146 VQSSVLAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEV 1192


>gi|297287847|ref|XP_001105243.2| PREDICTED: protein sidekick-1-like [Macaca mulatta]
          Length = 2138

 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 196/806 (24%), Positives = 315/806 (39%), Gaps = 76/806 (9%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W ++                 
Sbjct: 47  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMRD---------------GR 87

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
           +  T S     I    Q  D G Y C   N+ G+++    ++   ++G F      +   
Sbjct: 88  ELTTYSSEYKYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFTDTDQRKTVP 147

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 148 QGRAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTASDAGAYYV 205

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECV 422
              ++ +   +  PF       H +   +  P     T    P          +  LEC+
Sbjct: 206 QAVNEKNGENKTSPFI------HLSIANIGTPETTAPTIVVPPGNRSVVAGSSETTLECI 259

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-- 478
           A   PV   S  W R G  +   +   +F R LTI N    D G Y+C A+   SA E  
Sbjct: 260 ASARPVEDLSVTWKRNGVRI--TSGLHSFGRRLTISNPTSADTGLYVCEAALLGSAFEPA 317

Query: 479 -SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            +   + I   P FT  P +    + +  +   C+A GVP  T  W+++   ++     L
Sbjct: 318 RAKAFLFITEPPYFTAEPESRISAEVEETVDIRCQAMGVPLPTLQWYKDAISISR----L 373

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ++     +    L I+ L PE D  ++QC A N+     +   L V  + P F +RP  +
Sbjct: 374 QNPRYKVLASGGLRIQKLRPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRP--A 430

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDD 652
           +T   +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D
Sbjct: 431 DTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQD 490

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   +   L V +  S     P    +       L C A  +  + + 
Sbjct: 491 AGNYTCYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLR 549

Query: 713 YIWTHNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
           Y+W  +     N+ L    T  I +  DG LL I+     D G+Y C + S  G  S   
Sbjct: 550 YVWKKD-----NVALTPSSTSRIVVEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRMA 603

Query: 771 TVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
            + V   P  P  +       H  +  + W        PI +Y I+  +  NS W  V  
Sbjct: 604 RLEVIELPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHL 661

Query: 829 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
             +G E+   T          L P  TY+F+V A NE+G G+ S+ + +   P + P   
Sbjct: 662 SNVGPEMTGVT-------VGGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAP 714

Query: 889 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIA 947
           P  I   G     + + W+P P  + N     Y + +R      E+Q   +    +  + 
Sbjct: 715 PKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVN 771

Query: 948 VVRIPSEFYYTEYEVKVQAINDVGPG 973
              +     +T+YE++V A N  G G
Sbjct: 772 YCLVTDLIIWTQYEIQVAAYNGAGLG 797



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K+
Sbjct: 1823 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1876

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A NE+GYGEPSSPS   +   + P+
Sbjct: 1877 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEVGYGEPSSPSTAVSAQVEAPF 1927



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 22/196 (11%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            EV   S  +QW  G+    PI ++ +    + R  W +   ++S       VDR      
Sbjct: 1432 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACIVDR------ 1485

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
                  L P+++Y+ ++ A N++G  + SS +    T  D P + P  +         + 
Sbjct: 1486 ------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1539

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
            I W+P   E  N     Y+I++R+   +  +  +++TLK    +   +  +     Y  Y
Sbjct: 1540 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTDLKK---YRRY 1596

Query: 961  EVKVQAINDVGPGPES 976
            EV + A N +G  P S
Sbjct: 1597 EVIMTAYNIIGESPAS 1612



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 28/221 (12%)

Query: 768  TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 823
            T+    ++  PG P G      H TS+  IQW    D + NG  +  Y+I         +
Sbjct: 1511 TEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL-LQGYRI---------Y 1560

Query: 824  FNVSEHVIGKEVDRYTGRKEASIENVLV---PWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
            +   E+  G   +  T +   ++   L     +  YE  + A N +G    S+P   +  
Sbjct: 1561 YRELEYEAGSGTEAKTLKSPIALRAELTDLKKYRRYEVIMTAYNIIGESPASAPVEVFVG 1620

Query: 881  PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW---RKKNDTE-FQSE 936
             A  P  AP  +         L ++W+P P E QN     YKI++     +NDTE  +  
Sbjct: 1621 EA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNDTEKMKVL 1679

Query: 937  TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
             L E       VVR+ +   +TEY V + A N  G GP S+
Sbjct: 1680 FLPE------PVVRLKNLTSHTEYLVSISAFNAAGDGPRSD 1714



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 95/230 (41%), Gaps = 39/230 (16%)

Query: 768  TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +        
Sbjct: 1000 TSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG------ 1053

Query: 825  NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                  IG E   V  Y    E   + +    L P++ Y F++   N +G    S  S  
Sbjct: 1054 -----AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSSRV 1108

Query: 878  YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 934
              T    P  AP+ +         L + W PLP  + N    ++ Y+I +WR    ++ Q
Sbjct: 1109 IQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SDLQ 1164

Query: 935  SETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEV 978
            S  L +     +   R+  EF       + EYE+++QA N VG GP SEV
Sbjct: 1165 SSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEV 1209


>gi|47209404|emb|CAF90870.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1319

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 197/842 (23%), Positives = 336/842 (39%), Gaps = 157/842 (18%)

Query: 209 LNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268
           L DI+L C A G P P++EW K+     R+           R  L+ G L   +   ++ 
Sbjct: 67  LEDISLPCEATGNPPPTFEWVKDG---QRI-----------RSDLASGTLQAKEDDLLQQ 112

Query: 269 -RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPG 325
             G Y C ASN +G+ +++ V +         LK+  +      G+++   C+PP +   
Sbjct: 113 FEGHYRCYASNIYGTAMTQIVHVIVE-AQPVLLKQQKDHKRAYEGESLILSCNPPESSTP 171

Query: 326 VNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGRNGPFF 384
              +W      +  + D RV V  DG LYFS L + D+  +Y CN Q     T       
Sbjct: 172 PFIHWMDKQMIHISQSD-RVMVGLDGNLYFSNLLKSDSRKDYMCNAQYLAVMTTLTESAI 230

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRR-GSPLPRN 443
            L V P                                    P P   W ++ GS    +
Sbjct: 231 SLTVLP----------------------------------SEPTPEVEWKKKDGSLEETS 256

Query: 444 AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
              + +NR     ++ ++D GEY C+A N       S T++++A P +    T +     
Sbjct: 257 GRGDKYNRWFHFESIGLKDDGEYECKARNSHGFTTHSFTVTVEAAPYWVKEPTSQLYSPG 316

Query: 504 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
             +   C+A G+P  T +W  NG+ +      ++++ R  +   VL +R +    D A+Y
Sbjct: 317 ETVRLDCQAEGIPTPTITWSINGQPITE----VDEEPRRSVSGGVLILRDVV-FSDTAVY 371

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY---AGEGGNVTIFCNPEAAPKPKF 620
           QC A N+  +   +  L V+ L P      L S+       EG NV + C    +P+P  
Sbjct: 372 QCEATNKHGSALLNTFLHVVELPPQI----LTSDGLLYKVTEGKNVLMDCEAFGSPRPHI 427

Query: 621 VWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN-----VHGMDESKGRLI 674
            W+ +  + + S  R  +  NG L++S V  DD+G+YSC+  +     ++   E   R +
Sbjct: 428 TWEAEDRLPLLSNPRVSLMTNGTLVMSEVDHDDAGVYSCSVKHNNNISINAHLEVYNRTV 487

Query: 675 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETP 733
           +L       + P  + I    ++ L C   T+  L  A  +W  +G+++       +E+ 
Sbjct: 488 IL-------KPPEDLLILRGTSVLLPCKFSTDPRLPKAQVVWKKDGIKL-------MESK 533

Query: 734 NIN----IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 789
             N    +D   L +++  F+D+  Y C V S +  ++   ++ V   P  P  + + EV
Sbjct: 534 AANKYSFLDTDTLIVSDVQFSDSAPYSCEVISALDHVTATGSITVVDRPDPPKHLFLSEV 593

Query: 790 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 849
              S T+ WT G ++  PIT + + +R   ++      E    +E  +     +  ++  
Sbjct: 594 TDDSLTLNWTPGPSHNSPITEFIVESREEQHTE----QEKWKWEETQKVPPNSQ-HLKLS 648

Query: 850 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK------------------------- 884
           L P+ TY F+VI  NE+G  +PS PS  + TP                            
Sbjct: 649 LRPYCTYRFRVITVNEVGRSDPSEPSDSHRTPPAGTCSYLQPFIGITKEPGINLPLHFPP 708

Query: 885 -PYQAPSRIGGGGGKIGDLSISW--------------------------EPLPREKQNAP 917
            P Q PS +         L I+W                          + + +   N  
Sbjct: 709 VPDQNPSGVRSESTDPDTLLITWDVSGLVQVSAFTSDQILFFKKKNMFLQEMDQLSHNGH 768

Query: 918 NIYYKIFWRK--KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           +  YK+ WR+    D  + S  +K           +     YT +E+ VQA+N +G GP 
Sbjct: 769 DFLYKVSWREAGAQDARWNSAEVKS------PPFLVEKTGTYTPFEITVQAVNSLGSGPA 822

Query: 976 SE 977
            E
Sbjct: 823 PE 824


>gi|307206268|gb|EFN84333.1| Protein sidekick [Harpegnathos saltator]
          Length = 2141

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 208/813 (25%), Positives = 337/813 (41%), Gaps = 77/813 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P FI QP++    LS+        L C A G P P Y WFK             D  +  
Sbjct: 6   PRFIIQPSNSGNILSENRTK---ILQCQARGNPQPKYTWFK-------------DWQAVS 49

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           R  ++ G+  I   R+ +D G YHC A+N  GSI S+ +  +  ++G+F+      +   
Sbjct: 50  RPNIAPGSFRIQSTRR-KDTGVYHCVATNDVGSIFSDRIAFSVAYMGKFD-DLTDRVVTV 107

Query: 310 NWGKAMFCD-PPTNY---PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 365
            +G A   + PP      PGV+++ +     +  E   R + + D  L+     + D G+
Sbjct: 108 EYGNAAVLELPPIESNPSPGVSWFSS-----DGTELYGRKYATTDHKLFILDAMKSDEGS 162

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP---KAGDKVRLECV 422
           Y     +       N PFF L+V    N +    P+   K  P+     K  +   + C+
Sbjct: 163 YRARAFNTQLGKEENSPFFKLQVTGDPNAEVA--PSIIVK--PQDTLIIKDQNAAHMYCI 218

Query: 423 AFGYPVPSYN--WTRRGSPL--PRNAYF--ENFNRILTIPNVKVEDQGEYICRA---SND 473
           A    +      W + G P+   R AY   +++NR L + +  +   G Y C     S  
Sbjct: 219 ANARALHELRILWMKDGIPIENSRVAYSFNDSWNRTLMLISANMTYTGTYSCHVDLKSGG 278

Query: 474 RSALESSVTISIQAEPNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
              L +S  +++  +P F   L  + + D  + +T +C+  G P    +WFRN E + + 
Sbjct: 279 YPTLSASAEVTVYEKPTFNTELKKETLSDYGSTVTLSCDVDGTPVPKITWFRNAESVGNL 338

Query: 533 TLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                 + RY I QD  LTI+ L  + D  M+QC A N+     S   LR  T KP  + 
Sbjct: 339 -----KESRYVIEQDGSLTIKKLTMD-DSGMFQCLASNEAGEASSYTWLRAKTSKPIMEN 392

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSR 650
            P        +G + T+ CN  AAPKP   W   D  ++   GR ++ +NG+LLI+ V  
Sbjct: 393 GPQNLTVL--DGKDATLSCNAVAAPKPNTTWYYNDTILVEIAGRVQVLDNGDLLIAAVKP 450

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
           +D+G Y+C   N  G     G L V+   +   Q P   ++   +  +L+CS   +  + 
Sbjct: 451 NDAGKYTCIRANEAGSVNGSGLLTVMVR-TRIVQPPVDTSVLLGQTAKLQCSVVNDPSVV 509

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770
               W HN   I       ++  +     G LEI     +D GEY C V S  G  +   
Sbjct: 510 YDMAWFHNAQVINTQASQRVKMRH----DGTLEIVAVRASDVGEYMCSVVSPGGNETRSA 565

Query: 771 TVIVEGPPGLPGGVQVVEVHKTS---ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
            + V   P  P  V    V + S     + W  G     P   + +  R   +S    +S
Sbjct: 566 RLSVIELPFAPINVVATRVERISPRTINVTWVPGFDGNSPTKKFTVEKREVSDSA--PIS 623

Query: 828 EHVIGKEV--DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
           + ++  ++  +  +      + + L   + Y+F+V A N +G G  S PS     P + P
Sbjct: 624 DSLVNWDIVCNNVSADTRWVLLSNLKAAAAYQFRVYAENSVGKGMSSEPSNIVVLPQEPP 683

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY-----YKIFWRKKNDTEFQSETLKE 940
              P    G      ++   W+ LP E+    +I      Y++F    N    Q+ T + 
Sbjct: 684 SGPPVGFVGSARSSSEIITQWQ-LPLEEYRNGHILGYILRYRLFGYSVNPWMTQNITNEA 742

Query: 941 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
             N  I  +       + +YEV++ A ND G G
Sbjct: 743 QRNYLITDL-----ITWKDYEVQIAAYNDKGVG 770



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 19/250 (7%)

Query: 728  NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----PGLPGG 783
            + L+  N   D    ++ +       ++E    ++VG    K  VI  G     P  P  
Sbjct: 938  DSLQVKNFTADVLSTKVEHLQAMTHYKFEVAAWTSVGPGKAKVAVIQSGIEPVLPEPPTK 997

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            + +  +   S  +Q+T G      IT + + A+T  NSTW+N+ E              +
Sbjct: 998  LALSNIDAFSVVLQFTPGFDGNSSITKWTVQAQTARNSTWYNIYE----------VSDPD 1047

Query: 844  ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            A    V  L P++ Y+ ++IA N +G  +PS P+ ++ T    P   P  +        +
Sbjct: 1048 ACTVTVDGLTPFTQYKLRLIANNVVGASQPSEPTKEFQTIQAPPSHPPKNVTVRAMSATE 1107

Query: 902  LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
            L + W PL + +       Y + +++      +S T++++      V+    EF   +YE
Sbjct: 1108 LRVRWIPLQQVEWYGNPRGYNVTYKEVRTNLSKSITIEDH-TANSYVLENMEEF--ADYE 1164

Query: 962  VKVQAINDVG 971
            + +QA NDVG
Sbjct: 1165 IVMQAFNDVG 1174



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 644
           L+P F  +P  S     E     + C     P+PK+ W KD   +     R     G+  
Sbjct: 4   LEPRFIIQPSNSGNILSENRTKILQCQARGNPQPKYTWFKDWQAVS----RPNIAPGSFR 59

Query: 645 ISPVSRDDSGIYSCTATNVHG 665
           I    R D+G+Y C ATN  G
Sbjct: 60  IQSTRRKDTGVYHCVATNDVG 80



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 75/198 (37%), Gaps = 13/198 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            E  PG P  V   +V  T+A I W         I  YK++   N N       E      
Sbjct: 1289 EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEIFAYKVVFHLNSNQDRQFSKEFPASDR 1348

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
                TG         L P   Y F V A   LG+G+ +          ++P QAPS    
Sbjct: 1349 TFTATG---------LEPEKYYMFSVTAQTRLGWGKTAYALVFTTNNRERP-QAPSMPQV 1398

Query: 895  GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
               ++    I++   P     AP  YY +  + +N   FQ  T+ E     +      + 
Sbjct: 1399 SKSQVQSRQITFSWTPGRDGFAPLRYYTV-QQSENSGPFQ--TIPERVEPTLTSYTANNL 1455

Query: 955  FYYTEYEVKVQAINDVGP 972
              YT Y+ ++QA ND+GP
Sbjct: 1456 KPYTLYQFRIQATNDIGP 1473


>gi|392332542|ref|XP_003752615.1| PREDICTED: protein sidekick-1-like [Rattus norvegicus]
          Length = 2114

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 196/799 (24%), Positives = 321/799 (40%), Gaps = 61/799 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W + D       + L    S+
Sbjct: 6   APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWIRND-------SELTAYSSE 54

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            R+ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 55  YRYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDADQRKTVS 106

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+ P     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 107 QGHAALLNLLPITSCPRPQVTWFREG--HKIIPSSRIAITLENQLVILATTASDAGAYYV 164

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYP 427
              ++ +   +  PF  L V   +  Q+   P         +  AG  +  LEC+A   P
Sbjct: 165 QAVNERNGENKTSPFIHLSVARDTGTQEAMAPVIVVAPGNRSVVAGSSETTLECIANARP 224

Query: 428 VP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVT 482
           V   S +W R G  L   +   ++ R LTI N    D G Y+C A+   SA E   +   
Sbjct: 225 VEELSVHWKRNGVRL--TSGLHSYGRRLTIINPTSADTGMYVCEATLRGSAFEPARAKAF 282

Query: 483 ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           +SI   P FT  P +    + +  +   C A GVP  T  W+++   L+     L++   
Sbjct: 283 LSIIEPPYFTAEPESRILGEVEETVDIPCRAMGVPLPTLQWYKDAVPLSK----LQNPRY 338

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +    L I+ L+PE D  ++QC A N+     +   L V  + P+F +RP++  T   
Sbjct: 339 RVLPSGGLHIQKLSPE-DSGIFQCFANNEGGEIQTHTYLDVTNIAPAFTQRPVD--TTVT 395

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 657
           +G    + C    APKP   WKK  +I+ SG  R     + E+G L I+PV   D+G Y+
Sbjct: 396 DGMTAVLRCEVSGAPKPAITWKKGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYA 455

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C ATN      +   L V +  S       ++ I       L C A  +    + Y+W  
Sbjct: 456 CYATNTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTSLRYVWKK 514

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           +   I     + +    +  DG L+ I+     D G+Y C + S  G  S    + V   
Sbjct: 515 DNAVITPSSSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIEL 570

Query: 778 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           P  P  +   +      S T+ W        P+ +Y +    N NS W  V    +G E+
Sbjct: 571 PHPPQNLLASLSSARSHSVTLSWVRPFDGNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEM 628

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
              T        + L P  TY+F+V A N++G G+ S+ + +   P + P   P  I   
Sbjct: 629 AGVT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 681

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 954
           G     + + W+P P  + N     Y + +R      E Q   +    +  +    +   
Sbjct: 682 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDL 738

Query: 955 FYYTEYEVKVQAINDVGPG 973
             +T+YE++V A N  G G
Sbjct: 739 IIWTQYEIQVAAYNGAGLG 757



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G T   P T Y I AR +    W      +  K
Sbjct: 1802 AEGSPGSPRNVLVTK-SASELTLQWTEGNTGNTPTTGYVIEARPSDEGLW-----DMFAK 1855

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R        ++  L    TYEF+V+A N+ G+GEPS PS   +  A+ P+
Sbjct: 1856 DIPRSATSYTVGLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1907



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 17/156 (10%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            V   EV   S  +QW  G+    PI ++ +  R      W   S  +            E
Sbjct: 1388 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSI----------SHE 1437

Query: 844  ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            A++  V  L P+++Y+ ++ A N++G  + S+ +    T  D P + P  +         
Sbjct: 1438 ATLCAVERLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTTSS 1497

Query: 902  LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 937
            + I W+P   E  N     Y+I++R     E +SET
Sbjct: 1498 VLIQWQPPRDESLNGLLQGYRIYYR-----ELESET 1528



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 22/228 (9%)

Query: 768  TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 823
            T+    ++  PG P G      H TS+  IQW    D + NG  +  Y+I  R   + T 
Sbjct: 1471 TEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL-LQGYRIYYRELESETG 1529

Query: 824  FN------VSEHVIGKEVDRYTGRKEASIENVLVPWST--------YEFKVIAGNELGYG 869
             +       S   +  E+   +  K  +  + L  +          YE  + A N +G  
Sbjct: 1530 LSPEPKTLKSPSALRAELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAYNIIGES 1589

Query: 870  EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929
              S P   +   A  P  AP  I         L ++W+P P E QN     YK+++ +  
Sbjct: 1590 PASVPVEVFVGEA-APAMAPQNIQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEA- 1647

Query: 930  DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
            D+  ++E +K    +   VV+I     +T+Y V + A N  G GP S+
Sbjct: 1648 DSRNETEKMKVL-FLPEPVVKIKDLTSHTKYLVSISAFNAAGDGPRSD 1694


>gi|355747487|gb|EHH51984.1| Protein sidekick-1, partial [Macaca fascicularis]
          Length = 2035

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 196/801 (24%), Positives = 317/801 (39%), Gaps = 65/801 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W ++                 
Sbjct: 5   APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMRD---------------GR 45

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
           +  T S     I    Q  D G Y C   N+ G+++    ++   ++G F      +   
Sbjct: 46  ELTTYSSEYKYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFTDMDQRKTVP 105

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 106 QGRAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTASDAGAYYV 163

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYP 427
              ++ +   +  PF  L +       +   P         +  AG  +  LEC+A   P
Sbjct: 164 QAVNEKNGENKTSPFIHLSIARDIGTPETTAPTIVVPPGNRSVVAGSSETTLECIASARP 223

Query: 428 VP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVT 482
           V   S  W R G  +   +   +F R LTI N    D G Y+C A+   SA E   +   
Sbjct: 224 VEDLSVTWKRNGVRI--TSGLHSFGRRLTISNPTSADTGLYVCEAALLGSAFEPARAKAF 281

Query: 483 ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           + I   P FT  P +    + +  +   C+A GVP  T  W+++   ++     L++   
Sbjct: 282 LFITEPPYFTAEPESRISAEVEETVDIRCQAMGVPLPTLQWYKDAISISR----LQNPRY 337

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +    L I+ L PE D  ++QC A N+     +   L V  + P F +RP  ++T   
Sbjct: 338 KVLASGGLRIQKLRPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRP--ADTTVT 394

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 657
           +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D+G Y+
Sbjct: 395 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 454

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N  G   +   L V +  S     P    +       L C A  +  + + Y+W  
Sbjct: 455 CYAANTEGSLNASATLTVWNQTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 513

Query: 718 NGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
           +     N+ L    T  I +  DG LL I+     D G+Y C + S  G  S    + V 
Sbjct: 514 D-----NVALTPSSTSRIVVEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRMARLEVI 567

Query: 776 GPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             P  P  +       H  +  + W        PI +Y I+  +  NS W  V    +G 
Sbjct: 568 ELPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGP 625

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           E+   T        + L P  TY+F+V A NE+G G+ S+ + +   P + P   P  I 
Sbjct: 626 EMTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIV 678

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 952
             G     + + W+P P  + N     Y + +R      E+Q   +    +  +    + 
Sbjct: 679 ASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVT 735

Query: 953 SEFYYTEYEVKVQAINDVGPG 973
               +T+YE++V A N  G G
Sbjct: 736 DLIIWTQYEIQVAAYNGAGLG 756



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K+
Sbjct: 1802 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1855

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A NE+GYGEPSSPS   +   + P+
Sbjct: 1856 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEVGYGEPSSPSTAVSAQVEAPF 1906



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 28/209 (13%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            EV   S  +QW  G+    PI ++ +  R      W   S  +      R+     A I 
Sbjct: 1391 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSI------RHAA--TACIV 1442

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
            + L P+++Y+ ++ A N++G  + SS +    T  D P + P  +         + I W+
Sbjct: 1443 DRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQ 1502

Query: 908  PLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIAVVRI 951
            P   E  N     Y+I++R+   +  +  +++TLK              +  V  +    
Sbjct: 1503 PPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTVNSSSTST 1562

Query: 952  PSEFY----YTEYEVKVQAINDVGPGPES 976
              E      Y  YEV + A N +G  P S
Sbjct: 1563 MCELTHLKKYRRYEVIMTAYNIIGESPAS 1591



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 11/126 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1575 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1633

Query: 916  APNIYYKIFW---RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI++     +NDTE  +   L E       VVR+ +   +TEY V + A N  G
Sbjct: 1634 GNIQGYKIYYWEADSQNDTEKMKVLFLPE------PVVRLKNLTSHTEYLVSISAFNAAG 1687

Query: 972  PGPESE 977
             GP S+
Sbjct: 1688 DGPRSD 1693



 Score = 42.7 bits (99), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 39/241 (16%)

Query: 757  CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 813
              V +    + T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +
Sbjct: 948  AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1007

Query: 814  IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 866
              +              IG E   V  Y    E   + +    L P++ Y F++   N +
Sbjct: 1008 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1056

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 923
            G    S  S    T    P  AP+ +         L + W PLP  + N    ++ Y+I 
Sbjct: 1057 GPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1116

Query: 924  FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 977
            +WR    ++ QS  L +     +   R+  EF       + EYE+++QA N VG GP SE
Sbjct: 1117 YWR----SDLQSSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1167

Query: 978  V 978
            V
Sbjct: 1168 V 1168


>gi|345782838|ref|XP_848767.2| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion molecule
           isoform 2 [Canis lupus familiaris]
          Length = 1303

 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 227/882 (25%), Positives = 352/882 (39%), Gaps = 114/882 (12%)

Query: 149 GMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSI 208
           G   +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +   
Sbjct: 16  GAPLILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE--- 62

Query: 209 LNDITLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN--- 261
             +I + C A G P PS+ W +     D  +D LV   + P S        G L IN   
Sbjct: 63  --NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIMS 110

Query: 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPT 321
           + +     G Y C A N+ G+ IS ++ +       +  ++   I  +N G+++      
Sbjct: 111 EGKAETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQSLILPCRP 169

Query: 322 NYPGVN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTG 378
                    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T 
Sbjct: 170 PLGLPPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTI 228

Query: 379 RNGPFFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKV 417
           +      +KV                + F   K     P TF  PE   +      G+ +
Sbjct: 229 QQKQPISVKVISVDELNDTIAANLSDTEFYSAKSNRERPPTFLTPEGNASHKEELRGNVL 288

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W +    LP N  ++ NF + L I  V   D G Y C A N   A
Sbjct: 289 SLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKKTLQIIQVSEADSGNYQCIAKNALGA 348

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++T++++A P + +   +  +    D T  C A G P    SW  NG  +  E  P 
Sbjct: 349 IHHTITVTVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLSNGVPI--EIAP- 405

Query: 537 EDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 595
           +D  R    D   TI + N  ER  A+YQC A N+     ++  + VL   P    R L 
Sbjct: 406 DDPSRKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANTFVNVLAEPP----RILT 458

Query: 596 SET--YAGEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVS 649
           S    Y        +  C    +P P   W K     GS     I+   ENG L I    
Sbjct: 459 SANTLYQVIADRPALLDCAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQ 516

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
           +D +G Y+C A N  G+ +++  L V       +Q P    +     +   C    +  L
Sbjct: 517 KDSTGTYTCVARNKLGVAKNEVHLEVKDATRIIKQ-PEYAVVQRGSTVSFECKVKHDHTL 575

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769
                W  +   + N            +D   L + +    D G Y CV  +T+  +S  
Sbjct: 576 IPTITWLKDNGELPNDG-------RFTVDKDHLVVADVRDNDGGTYTCVANTTLDNVSAS 628

Query: 770 TTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 819
             + V  P          P  P  +++ +    S  + WT G  N  PI  + I      
Sbjct: 629 AVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPIIKFIIEYEDAM 688

Query: 820 NST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
           +    W + +E              + + +  L P+  Y F+V+A N LG   PS  S Q
Sbjct: 689 HEAGLWHHQTE----------VSGMQTTAQLKLSPYVNYSFRVMAINNLGRSLPSEASEQ 738

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSE 936
           Y T A +P   P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S 
Sbjct: 739 YLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSV 798

Query: 937 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            +    NV   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 799 VV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 16/138 (11%)

Query: 781 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
           PG V+V  V+ T A + W         G   G  I ++K    +  N          I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQGSSKRN-------RRHIEK 901

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           ++  + G K   +   L P+S Y   V   N  G G P+SP   +NTP   P  APS + 
Sbjct: 902 KILTFQGSKTHGMLPGLEPYSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959

Query: 894 GGGGKIGDLSISWEPLPR 911
                +  L++ W+P  R
Sbjct: 960 IVNPTLDSLTLEWDPPSR 977


>gi|332257801|ref|XP_003277993.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Nomascus
           leucogenys]
          Length = 2164

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 191/804 (23%), Positives = 318/804 (39%), Gaps = 71/804 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W   D       + L    S+
Sbjct: 47  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMHND-------SELTTYSSE 95

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 96  YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVS 147

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P T+YP     W R+   + +    R+ ++ +  L   A    D+G Y  
Sbjct: 148 QGRAAILNLLPITSYPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTTSDSGAYYV 205

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP------KAGDKVRLECV 422
              ++ +   +  PF  L +      + +  P     T    P          +  LEC+
Sbjct: 206 QAVNEKNGENKTSPFIHLSIA-----RDVGTPETMAPTIVVPPGNRSVVAGSSETTLECI 260

Query: 423 AFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE-- 478
           A   PV   S  W R G  +   +   +F R LTI N    D G Y+C A+    A E  
Sbjct: 261 ANARPVEDLSVTWKRNGVRI--TSGLHSFGRRLTISNPTSADTGPYVCEAALRGGAFEPA 318

Query: 479 -SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            +   + I   P FT  P +    + +  +   C+A GVP  T  W+++   ++     L
Sbjct: 319 RAKAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQWYKDAISISR----L 374

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
           ++     +    L I+ L+PE D  ++QC A N+     +   L V  + P F +RP++ 
Sbjct: 375 QNPRYKVLASGGLRIQKLSPE-DSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVD- 432

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDD 652
            T   +G    + C    APKP   WK++ +I+ SG  R     + E+G L I+PV   D
Sbjct: 433 -TTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQD 491

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C A N  G   +   L V +  S     P    +       L C A  +  + + 
Sbjct: 492 AGNYTCYAANTEGSLNASAMLTVWNRTSIIHP-PEDHVVIKGTTATLHCGATHDPRVSLR 550

Query: 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
           Y+W  + V +     + +    +  DG LL I+     D G+Y C + S  G  S    +
Sbjct: 551 YVWKKDNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRMARL 606

Query: 773 IVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 830
            V   P  P  +       H  +  + W        PI +Y +    N NS W  V    
Sbjct: 607 EVIELPHSPQNLLASPKSSHSHAVVLSWVRPFDGNSPILYYVVELSEN-NSPW-KVHLSN 664

Query: 831 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
           +G E+   T        + L P  TY+F+V A NE+G G+ S+ + +   P + P   P 
Sbjct: 665 VGPEMTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPK 717

Query: 891 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVV 949
            I   G     + + W+P P  + N     Y + +R      E+Q   +    +  +   
Sbjct: 718 NIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYC 774

Query: 950 RIPSEFYYTEYEVKVQAINDVGPG 973
            +     +T+YE++V A N  G G
Sbjct: 775 LVTDLIIWTQYEIQVAAYNGAGLG 798



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G +   P T Y I AR +    W      +  K
Sbjct: 1850 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1903

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R       S+   L    TYEF+V+A NE GYGEPSSPS   +   + P+
Sbjct: 1904 DIPRSATSYTLSLAK-LRQGVTYEFRVVAVNEAGYGEPSSPSTAVSAQVEAPF 1955



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 36/217 (16%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 839
            V   EV   S  +QW  G+    PI ++ +    + R  W +   ++S       VDR  
Sbjct: 1436 VPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1493

Query: 840  GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
                      L P+++Y+ ++ A N++G  + SS +    T  D P + P  +       
Sbjct: 1494 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1543

Query: 900  GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGN 943
              + I W+P   E  N     Y+I++R+   +  +  +++TLK              +  
Sbjct: 1544 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKT 1603

Query: 944  VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
            V  +      E      Y  YEV + A N +G  P S
Sbjct: 1604 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPAS 1640



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1624 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1682

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D++ ++E +K    +   VV++ +   +T+Y V + A N  G GP 
Sbjct: 1683 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVKLKNLTSHTKYLVSISAFNAAGDGPR 1740

Query: 976  SE 977
            S+
Sbjct: 1741 SD 1742


>gi|327264223|ref|XP_003216914.1| PREDICTED: neuronal-glial cell adhesion molecule-like [Anolis
           carolinensis]
          Length = 1244

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 217/861 (25%), Positives = 339/861 (39%), Gaps = 105/861 (12%)

Query: 180 IENPDKIPRGPYFIKQPTD--VVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDR 237
           IE P+ +P+ P F +QP    VVF        +++T+ C A G P   + W K+      
Sbjct: 73  IEFPEGLPQPPEFSEQPEKELVVFPT------DEVTVRCQASGNPPVEFHWTKDG---KE 123

Query: 238 LVANLIDPLSDKRFTLSGGNLII---NDPRQVEDRGSYHCKASNKFGSIIS-ESVQLAFG 293
              N +  ++ ++     G ++I   N     + +G Y C A+N  G+ +S ES  +A  
Sbjct: 124 FNPNEVPGMTQRK---GSGTIVITTNNGNVATKFKGVYRCYATNSLGTAMSYESRIIAES 180

Query: 294 FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL 353
                  K AP    +     + C+PP +      YW      + V+ D+RV +  DG L
Sbjct: 181 APQWPKEKVAPITVEEGTHTILPCNPPISAVPPKIYWLNSRIEHIVQ-DERVTIGQDGNL 239

Query: 354 YFSALEQIDAG-NYSCN--------------VQSKVSDTGRNGPFFPLKVFPHSNFQQLK 398
           YF+ ++  D+  +Y CN              ++ KV+ T       P+++ P    +Q  
Sbjct: 240 YFANVQMTDSRPDYICNAHFQGPRVIIQKEPIELKVTTTNTLSHKKPMRIMPEK--RQTT 297

Query: 399 FPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS-PLPRNAYFENFNRILTIPN 457
           +            K G+ + LEC+  G P PS  W  +    +  N  FEN  + L I N
Sbjct: 298 Y----------VAKLGESLVLECIVAGLPTPSVEWVHKNRLNVYPNVVFENAKKTLRILN 347

Query: 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517
           V  +D GEY C A+ND   +  + T++++A P +      +       +   CE  G P 
Sbjct: 348 VTDDDDGEYECIATNDHGKIVLTYTVNVEAAPYWIKKPVSQIYAPGESVRLDCEVEGKPK 407

Query: 518 VTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574
              SW  NG       +PLED   + R  +Q   L I  + P  D A+ QC A N+  + 
Sbjct: 408 PEVSWRING-------IPLEDVMPEKRRKVQPGALIINEVEP-NDTAVIQCEAHNKHGSL 459

Query: 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR 634
            ++A + VL L P+    P   E    E     + C     P+P   W  D   +    R
Sbjct: 460 LANAYILVLQL-PAQILTPGGLEYSVVENQAAVLDCMAFGVPRPTVKWITDDKYVLDDIR 518

Query: 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 694
             +F NG LL+  V R D+G ++C A N    D    RLIV  G + +E  P        
Sbjct: 519 SFLFTNGTLLLEQVQRQDAGNFTCIADNDVYEDSITARLIV-KGATTFEVGPVNTEKKEG 577

Query: 695 RNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 753
             +   C    +E +    I W  NG  I   D NE       I+   L ITN  ++D G
Sbjct: 578 ETVTFHCKVLFDETIPEHGIKWRRNGKVIQESDENE----KYFINDTSLMITNLDYSDQG 633

Query: 754 EYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI----- 808
            Y C+  + +  +     ++V G PG    ++++        + WT G  + R I     
Sbjct: 634 IYSCLAWTALDSVEKSAKLVVYGKPGPVSNLELLRQQDHQVKLTWTPGDDHNRDIEAPDQ 693

Query: 809 -----------THYKIIART-----NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
                      T   II  T      WN+           +  D++    E     V+V 
Sbjct: 694 NPADVRGEGNETTNMIITWTPFLPWEWNAPSLKYHVQWRQENEDQWN-ETEVEAPPVVVT 752

Query: 853 ----WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
               ++ YE KV A NE G G   S    Y+   D P   P  +         + +SW  
Sbjct: 753 GTPVFTPYEIKVQARNEFGKGPEPSIELGYSG-EDVPEAIPENLAVEVLNSTTIKLSWIL 811

Query: 909 LPREK----QNAPNIYYKIFW------RKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-Y 957
             REK         +Y+  FW      R +      + +  +    G     I   F  +
Sbjct: 812 PNREKIFGHLKGFQVYF--FWLGTMADRSRRQARAHTHSHGKVLIEGDVSEIILGGFRPW 869

Query: 958 TEYEVKVQAINDVGPGPESEV 978
           + Y V++  +N  G GP SE 
Sbjct: 870 SRYRVQMSVLNGRGEGPHSEA 890


>gi|403280637|ref|XP_003931822.1| PREDICTED: protein sidekick-2 [Saimiri boliviensis boliviensis]
          Length = 2172

 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 204/810 (25%), Positives = 335/810 (41%), Gaps = 85/810 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 26  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 68

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 69  KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 124

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y 
Sbjct: 125 SHGEAAVIRAPRIASFPQPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY- 181

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN-FPKTFPEAPK-----AG-DKVRLE 420
             VQ+     G N    P+ +      + +  P +    T    PK     AG  +V LE
Sbjct: 182 -YVQAVNDKNGDNKTSQPITL----AVENVGGPADPIAATIIIPPKNTSVVAGTSEVTLE 236

Query: 421 CVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           CVA   P+   +  W + G  L  +    + NR LTIPN    D G Y C A    S++ 
Sbjct: 237 CVANARPLIKLHIIWKKDGVLL--SGGISDHNRRLTIPNPTASDAGYYECEAVLRSSSVP 294

Query: 479 SSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSET 533
           S V    +S+   P F +   ++H+  + +  +   C A GVP  + SW+++  ++  E 
Sbjct: 295 SVVRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSISWYKDAAVVEVEK 353

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L    Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + P
Sbjct: 354 LARFRQR----SDGGLQISGLVPD-DTGMFQCFARNSAGEVQTSTYLAVTSIAPNITRGP 408

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVS 649
           L+S     +G +V + C    AP+P   W+K   I+ SG     R    E+G+LLISP  
Sbjct: 409 LDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTH 466

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  +
Sbjct: 467 ISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRV 525

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 768
            V Y+W  +G  +G M+ N    P I +D  G L I+     D G Y C V S  G  S 
Sbjct: 526 TVRYVWEKDGATLG-MESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSR 580

Query: 769 KTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
              + V   P  P      +  V + +  + W        P+  Y +    N N+ W   
Sbjct: 581 SAHLRVRQLPHAPEHPVATLSTVERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPW--- 636

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
              V+   VD    +  +     LVP  +Y+F++ A N++G G+ S  + + + P + P 
Sbjct: 637 --TVLLPSVD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPT 691

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGN 943
             P  +   G     + I W+P P   QN     Y I +         +F++ T  +  N
Sbjct: 692 APPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYVIRYCLAGLPVGYQFKNITDADVNN 751

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           + +  + I     +T YE++V A N  G G
Sbjct: 752 LLLEDLII-----WTNYEIEVAAYNSAGLG 776



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 33/260 (12%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 947  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+         W  V  H +  E D     +   
Sbjct: 1004 IGPRSVTLQFRPGYNGKTSISRWLVEAQVGVVGEGEEWLLV--HQLSNEPDA----RSME 1057

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1058 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116

Query: 906  WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 957
            W PLP  + N    ++ YKI   K + ++   +TL       +   R+  E+       +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEW 1168

Query: 958  TEYEVKVQAINDVGPGPESE 977
            TEY V+VQA N +G GP S+
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQ 1188



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPHEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  +++N TE + +TL    N     V++ +   YT Y V V A N  G 
Sbjct: 1654 GDIQGYKIYFWEAQRQNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708

Query: 973  GPES 976
            GP S
Sbjct: 1709 GPRS 1712



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P   Q  +V   S  + W  G+    P+ +Y I  R   +  W     +VS +   
Sbjct: 1402 PPSRPVAQQE-DVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGVLLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSDVPEADRNGLVLGYKVMYKEK-DSDAQPRFWLVEGNSSRS 1260

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPG 973
              ++     Y  YEV+V A   +G G
Sbjct: 1261 -AQLTGLGKYVLYEVRVLAFTRIGDG 1285



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 76/196 (38%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +      E V+     +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
            YT          L P S Y F++ A    G+GE +          D+P Q PSR      
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPVAQQE 1411

Query: 898  KIGDLSI--SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
             +   S+  SWE  P     +P  YY I  R+     +   +     N    +V     F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1469

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483


>gi|326928941|ref|XP_003210631.1| PREDICTED: protein sidekick-1-like, partial [Meleagris gallopavo]
          Length = 2091

 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 198/802 (24%), Positives = 312/802 (38%), Gaps = 67/802 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W   D                
Sbjct: 38  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWLHND---------------S 78

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF---NLKRAPE 305
           +  T S     I    Q  D G Y C   N+ G+++    ++   ++G F   N K+   
Sbjct: 79  EITTYSSEYKYIIPALQRSDAGFYQCIVRNRMGALLQRRSEVQVAYMGNFMDTNQKKTVT 138

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 365
            G       M      +YP     W RD   + +    R+ ++ +  L   A   +DAG+
Sbjct: 139 EGEAAVLNFMHI---FSYPRPQVTWFRDG--HKIIPSSRIAITLENQLVILATSVVDAGD 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAF 424
           Y     ++ +   +  P   L V    +      P    P           +V LECVA 
Sbjct: 194 YYVQAVNEKNGENKTSPLIHLSVASAMDPSDTTAPIIVIPPQNTSVVAGSSEVTLECVAS 253

Query: 425 GYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---S 479
             PV   S  W R G  +   +   +F R LTI N    D G Y C A    S  E   +
Sbjct: 254 ARPVERLSIMWKRNGIKI--TSGISSFGRRLTITNPTSADVGMYFCEAKLRDSTEEPARA 311

Query: 480 SVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
              IS+   P FT+ P +    + + D+   C+A GVP  +  W+++   L+     L++
Sbjct: 312 KAFISLMEPPYFTVEPESVILAEVEKDVDILCQAMGVPIPSLVWYKDSIPLSK----LQN 367

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
                +    L I  L P+ D  ++QC A N+     +   L V  +KP+F + P   +T
Sbjct: 368 PRYKVLLSGGLRIHALRPQ-DAGIFQCFASNKAGEIQTYTYLDVTNIKPAFIQPP--EDT 424

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSG 654
              EG    + C    APKP   WKK   I+ SG     R  + E+G L I+PV   D+G
Sbjct: 425 TVTEGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRFILLESGGLQITPVFLQDAG 484

Query: 655 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
            Y+C A N  G   +   L V +  ++    P   T+       LRC A  +  + + Y+
Sbjct: 485 NYTCHAVNSEGALNAFVMLTVWNR-TFIVHPPENSTVIKGTTATLRCEATHDPRISIRYV 543

Query: 715 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           W  + V I     + +    +  DG LL I+     D G+Y C V S  G  S    + V
Sbjct: 544 WKKDSVVINPSSSSRI---TVEKDGTLL-ISQTWSGDIGDYTCEVISFGGNDSRMARLEV 599

Query: 775 EGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
              P  P  +  +    +  S  + W        P+ +Y +    N NS W         
Sbjct: 600 IELPHSPQNLLAILNSSYSRSVVLSWVRPFDGNSPVLYYMVEVSEN-NSPW--------K 650

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
             +     +  +   + L P  TY+F+V A N++G G+ SS + +   P + P   P  I
Sbjct: 651 VHLSNLDPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNI 710

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRI 951
              G     + + W+P P  + N     Y + +R      E+Q    K   +  I    +
Sbjct: 711 VASGRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLV 767

Query: 952 PSEFYYTEYEVKVQAINDVGPG 973
                +T+YE++V + N  G G
Sbjct: 768 TDLIIWTQYEIQVASYNGAGLG 789



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 9/106 (8%)

Query: 773  IVEGPP-GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
            +  GP  G PG  Q + V K+++  T+QWT+G +  +P T Y I AR +    W      
Sbjct: 1814 VTAGPAEGSPGSPQEILVTKSASGLTVQWTEGDSGEKPTTGYIIEARPSDEGLW-----D 1868

Query: 830  VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875
            +  K++ R       S++  L    TYEF+V+A NE GYGEPS PS
Sbjct: 1869 MFVKDIPRSATSYTVSLDK-LKQGVTYEFRVVAVNEFGYGEPSVPS 1913



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 9/155 (5%)

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
            E V   EVD     +   + N L P++ Y F++   N +G    S PS    T    P  
Sbjct: 1037 EWVSLHEVDNEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDV 1095

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNV 944
            APS +         L + W PLP  + N    ++ Y+I FWR     + Q   L +  N 
Sbjct: 1096 APSSVSVRTASESSLQMRWVPLPDTQYNGNPESVGYRIKFWR----VDLQPSALLKVIND 1151

Query: 945  GIAV-VRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
             +     I     +TEYE+++QA N +G GP SEV
Sbjct: 1152 RLERECTIEDLEEWTEYELQIQAFNAIGAGPWSEV 1186



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 24/247 (9%)

Query: 738  DGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVI--VEGPPGL-PGGVQVVEVHKT 792
            D  +LE+ N +      +     + VG   +S  + VI  ++ PP + P  V V    ++
Sbjct: 1049 DAQMLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPSSVSVRTASES 1108

Query: 793  SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            S  ++W    D   NG P +  Y+I   R +   +       VI   ++R     E +IE
Sbjct: 1109 SLQMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSAL---LKVINDRLER-----ECTIE 1160

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
            + L  W+ YE ++ A N +G G P S   +  T    P   P  +         + ++W 
Sbjct: 1161 D-LEEWTEYELQIQAFNAIGAG-PWSEVVRGRTRESVPSAPPENVSAEAVSSTQILLTWS 1218

Query: 908  PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
             +P  +QN   + YKI ++ K+ D+E +S+T++  GN   + + +     Y  YE++V A
Sbjct: 1219 AVPESEQNGLILGYKILYKAKDLDSEPRSQTVR--GNHTQSCL-LSGLRKYVLYEIRVLA 1275

Query: 967  INDVGPG 973
               +G G
Sbjct: 1276 FTRIGDG 1282



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 28/209 (13%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            +V   S  + W  G+    PI ++ +  R   +  W   S  +        +    + I 
Sbjct: 1409 DVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPDGDWQTYSSSI--------SHEATSCII 1460

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
              L P+++Y+ +V A N++G  + S+ +    T  D P + P  +         + + W+
Sbjct: 1461 ESLNPFTSYKLRVKATNDIGDSDFSAETEAVTTLQDVPDEPPGSVLVTPHTTSSVLVQWQ 1520

Query: 908  PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEY------GNVGIA 947
            P   E  N   + Y+I++R+              +N +  ++E   +        +  + 
Sbjct: 1521 PPKAESLNGLLLGYRIYYRELDYDAGSATESKAVRNPSALRAELTPQSSFKTVNSSSALT 1580

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPES 976
               +     Y  YEV + A N +G  P S
Sbjct: 1581 TYELTQLKKYKRYEVLMTAYNVIGESPTS 1609



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 19/129 (14%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  I         L ++W+P P + QN
Sbjct: 1593 YEVLMTAYNVIGESPTSTPVEVFVGEA-APAMAPQNIQVNSLSASQLELTWDPPPADSQN 1651

Query: 916  APNIYYKIFWRK---KNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
                 YKI++ +   +NDTE     F  ET           VR+ +   +T Y V + A 
Sbjct: 1652 GNIQGYKIYYWESDVQNDTEKVKVLFLPET----------TVRLKNLTSHTRYLVCISAF 1701

Query: 968  NDVGPGPES 976
            N  G GP S
Sbjct: 1702 NAAGDGPRS 1710


>gi|292619688|ref|XP_693332.4| PREDICTED: protein sidekick-2 [Danio rerio]
          Length = 2181

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 191/816 (23%), Positives = 325/816 (39%), Gaps = 97/816 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L +    N + L+C A G     ++W   D                 
Sbjct: 13  PYFKTEPVPSQLHLER----NRLVLTCMAEGSWPLEFKWIHND-------------TEIT 55

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           RF+L    LI +  R     G Y C   N+ G+++    ++   ++G F      +  +Q
Sbjct: 56  RFSLEYRYLIPSLDRS--HAGFYRCIVRNRVGALLQRRTEVQVAYMGSFEEGERTQAVSQ 113

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNY--- 366
             G  +       +P     W RD     +    R+ ++ D  L   +    DAG Y   
Sbjct: 114 GEGAVIPAPRIRCFPQPQVTWFRDG--RKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQ 171

Query: 367 SCNVQSKVSDTGRN------------GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG 414
           + N ++  + TG++             P  P  V P  N   +                 
Sbjct: 172 AVNDKNGENKTGQHITLSVENVGGPADPIAPTIVIPPRNTSVIS--------------GT 217

Query: 415 DKVRLECVAFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA-- 470
            +V +ECVA   P+   S +W + G  L R+    +FNR LT+ +  V D G Y C A  
Sbjct: 218 SEVTMECVANARPLIKLSISWKKDGV-LVRSG-LSDFNRRLTVLSPAVSDSGFYECEAVL 275

Query: 471 -SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGE 527
            S+   A+ +   + +   P F +   +KH+  + +  +   C+A GVP     W+++  
Sbjct: 276 RSSSVPAVSAGAYLHVLEPPQF-VKEPEKHITAEMEKVVDIPCQARGVPQPDIVWYKDAV 334

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
            ++    P++      +    L +  L P+ D  M+QC A+NQ     ++  L V ++ P
Sbjct: 335 PIS----PVKTPRYRVLSGGSLQVNGLLPD-DTGMFQCFARNQAGEVQTNTYLAVTSIAP 389

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNL 643
           +    P  S++   +G +V + C    AP+P   W+K   ++ SG     R  + E+G+L
Sbjct: 390 NITAGP--SDSTVIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSL 447

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LISP    D+G Y+C A+N  G+DE+   L+V    +     P   ++       + C  
Sbjct: 448 LISPSHISDAGTYTCMASNSRGIDEASADLVVW-ARTRITNPPQDQSVIKGTKATMTCGV 506

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKST 762
             +  + V ++W  +G  I    L     P + +D  G L I+     D G Y C V S 
Sbjct: 507 THDPSVSVRFVWEKDGQVIVTQGL-----PRLRLDVNGTLHISQTWSGDIGTYTCRVTSV 561

Query: 763 VGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
            G  S    + V   P  P     V     K +  + W        P+  Y +    N N
Sbjct: 562 GGNDSRNAHLRVRQLPHAPENPSAVLSSTEKRAINLTWAKPFDGNSPLIRYILEVSEN-N 620

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
           + W  +  ++  +          A   N L+P  +Y+F++ A N++G G+ S  + + + 
Sbjct: 621 APWTVLLANIEPEST--------AVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSL 672

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSET 937
           P + P   P  +   G     + I W+P P   QN     Y I +R      D ++    
Sbjct: 673 PEEPPSAPPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYIIRYRLTGLPVDIQY---- 728

Query: 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            K   N  +  + +     +T YE++V A N  G G
Sbjct: 729 -KNISNPDVTNLLLEDLIIWTNYEIEVAAYNGAGLG 763



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 35/261 (13%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 788
            PN+ ++     +T  +       E    ++ G+    ++ I  G PP LPG    + +  
Sbjct: 934  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQLSSSTISSGVPPELPGPPTNLAISN 990

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   + T+Q+  G      I+ +++ A+      N  W  V  H    E D        S
Sbjct: 991  IGPRTVTLQFKPGYDGKTSISRWQVEAQVGVIGENEDWVMV--HQRANEPD------ARS 1042

Query: 846  IE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
            +E + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L +
Sbjct: 1043 LEVSGLNPYTFYRFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWL 1102

Query: 905  SWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 956
             W PLP  + N    ++ Y++ + +   T   S+ L     + +   R+  EF       
Sbjct: 1103 RWVPLPEWEYNGNPDSVGYRVQYSR---TGAPSKAL-----LHVIADRLEREFTIEDLEE 1154

Query: 957  YTEYEVKVQAINDVGPGPESE 977
            +TEYEV+VQAIN +G GP S+
Sbjct: 1155 WTEYEVRVQAINGIGAGPWSQ 1175



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 35/211 (16%)

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIAR----TNWNSTWFNVSEHVIGKEVDRYTGRKEA 844
            V   S  + W  G+    PI +Y +  R     NW     +VS       VDR       
Sbjct: 1400 VQARSVLLSWEPGSDGLSPIRYYTVQVRELPEKNWTVHSASVSHESSSYIVDR------- 1452

Query: 845  SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904
                 L P+++Y+F+V A N++G  + S  S    T  D P ++P+ +         + I
Sbjct: 1453 -----LKPFTSYQFRVKATNDIGDSDYSQESEAITTLQDAPDESPTILTVTPHTTTSVLI 1507

Query: 905  SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-------- 956
             W+P P EK N   + ++I +R+      +S ++    +   +   + S +         
Sbjct: 1508 CWQPPPEEKINGILLGFRIRYRELLYDRLRSFSVHTISSASASWAELTSPYSMRNLSEPS 1567

Query: 957  -----------YTEYEVKVQAINDVGPGPES 976
                       +  YE+++   N VG GP S
Sbjct: 1568 LTQYELDNLLKHKRYEIRMSVYNAVGEGPTS 1598



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G  SSP   +   A  P   P  +           ++W+P P E QN
Sbjct: 1582 YEIRMSVYNAVGEGPTSSPQEVFVGEA-VPTAPPQNVIIQSATATQFDVTWDPPPLETQN 1640

Query: 916  APNIYYKIF---WRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKIF   +++KN+TE  ++  L E G      V++ +   YT Y + V A N  G
Sbjct: 1641 GDIQGYKIFFWEYQRKNETEKLRTLFLPEGG------VKLKNLTGYTTYMISVAAFNAAG 1694

Query: 972  PGPES 976
             GP S
Sbjct: 1695 DGPRS 1699



 Score = 43.1 bits (100), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 20/207 (9%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  Y++  +RT   S      
Sbjct: 1079 LQAPPDMAPANVTLRTASETSLWLRWVPLPEWEYNGNPDSVGYRVQYSRTGAPSKAL--- 1135

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HVI   ++R     E +IE+ L  W+ YE +V A N +G G  S P  +  T    P  
Sbjct: 1136 LHVIADRLER-----EFTIED-LEEWTEYEVRVQAINGIGAGPWSQPV-RGRTRESVPSC 1188

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGI 946
             P+ +         + + W  +P   +N   + YK+ +++K+ D+  Q  T++  GN   
Sbjct: 1189 GPTNVSAFATTSSSILVRWFEVPEPDRNGLILGYKVAYKEKDSDSPLQFWTVE--GNASH 1246

Query: 947  AVVRIPSEFYYTEYEVKVQAINDVGPG 973
            + V++     Y  YE++V A   +G G
Sbjct: 1247 S-VQLTGLGKYVLYEIQVLAFTRIGDG 1272


>gi|126308803|ref|XP_001378472.1| PREDICTED: protein sidekick-2 [Monodelphis domestica]
          Length = 2258

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 202/811 (24%), Positives = 335/811 (41%), Gaps = 87/811 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 112 PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 154

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 155 KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 210

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P  +++P     W RD     +    R+ ++ D  L   +    DAG Y 
Sbjct: 211 SHGEAAVIKAPRISSFPQPQVTWFRDG--RKIPPSSRIAITLDNTLVILSTVAPDAGRY- 267

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK------AG-DKVRLE 420
             VQ+     G N    P+ +      + +  P +        P       AG  +V +E
Sbjct: 268 -YVQAVNDKNGDNKTSQPITL----TVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTME 322

Query: 421 CVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           CVA   P+   +  W + G P+  +    + NR LTI N K  + G Y C A    S++ 
Sbjct: 323 CVANARPLIKLHIIWKKDGVPV--SGGVSDHNRRLTILNPKGSNTGYYECEAVLRSSSVP 380

Query: 479 SSV---TISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSET 533
           S V    +S+   P F I   ++H+  + +  +   C+A GVP    +W+++  +++ + 
Sbjct: 381 SVVRGAVLSVLEPPQF-IKEPERHITAEMEKVVDIPCQAKGVPSPITTWYKDAAVIDVKK 439

Query: 534 LPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
           L      R+ +  D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + 
Sbjct: 440 L-----SRFRLHGDGSLQISGLVPD-DTGMFQCFARNSAGEVQTSTYLAVTSIAPNITRG 493

Query: 593 PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPV 648
           PL+S     +G +V + C    AP+P   W+K   I+ SG     R  + E+G+LLISP 
Sbjct: 494 PLDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSIQLPRFTLLESGSLLISPT 551

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
              D+G Y+C ATN  G+DE+   L+V    +     P   ++       + C    +  
Sbjct: 552 RISDAGSYTCLATNSRGVDEASADLVVW-ARTRITMAPQDQSVIKGTKAFMTCGVTHDPS 610

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIS 767
           + V Y+W  +G  +G +D     TP + +D  G L I+     D G Y C V S  G  S
Sbjct: 611 VSVRYVWEKDGAILG-VD----STPRMRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDS 665

Query: 768 TKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 825
               + V   P  P      +    + S  + W        P+ HY +    N N+ W  
Sbjct: 666 RSAYLRVRQLPHAPEHPVATLSTAERRSINLTWAKPFDGNSPLIHYVLEMSEN-NAPW-- 722

Query: 826 VSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
               V+   VD      EA+   V  LVP  +Y+F++ A N++G G+ S  + + + P +
Sbjct: 723 ---TVLLPNVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEE 774

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYG 942
            P   P  +   G     + I W+P P   QN     Y I F        +Q    +   
Sbjct: 775 PPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRFCLAGLPVGYQ---FRNIT 831

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           N  +  + +     +T YE+ V A N  G G
Sbjct: 832 NADVNNLLLEELIIWTNYEISVAAYNSAGLG 862



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 33/261 (12%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 1033 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1089

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+         W  V  H +  E D     +   
Sbjct: 1090 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLANEPDA----RSME 1143

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + N L P++ Y F++   N +G   PS PS +  T    P  AP  +         L + 
Sbjct: 1144 VPN-LNPYTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPGNVTLRTASETSLWLR 1202

Query: 906  WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 957
            W PLP  + N    ++ YKI   K   ++   +TL       +   RI  E+       +
Sbjct: 1203 WMPLPEMEYNGNPESVGYKI---KYTRSDGHGKTLSH-----VVHDRIEREYTIEDLEEW 1254

Query: 958  TEYEVKVQAINDVGPGPESEV 978
            TEY V+VQA N +G GP S++
Sbjct: 1255 TEYRVQVQAFNAIGTGPWSQI 1275



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G  SSP   +   A  P   P  +   G     L ++WEP P E QN
Sbjct: 1681 YEIRMSVYNAVGEGPSSSPQEVFVGEA-VPTAPPQNVAVHGATATQLDVTWEPPPLEAQN 1739

Query: 916  APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW  +++N TE  ++  L E G      V++ +   YT Y V V A N  G
Sbjct: 1740 GDIQGYKIYFWEAQRRNSTERLKTLFLPENG------VKLKNLTGYTAYLVSVAAFNAAG 1793

Query: 972  PGPES 976
             GP S
Sbjct: 1794 DGPRS 1798



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 8/95 (8%)

Query: 790  HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 849
            + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +     +
Sbjct: 1922 YSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-----I 1975

Query: 850  LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
            L    +Y+F+VIA N+ GYG PSSPS   + PA K
Sbjct: 1976 LKHGVSYDFRVIAVNDYGYGTPSSPS--QSVPAQK 2008



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +T    S  V+     +
Sbjct: 1387 PGPPMGILFPEVRPTSVRLIWQPPAAPNGIILAYQITHRLN-TTTANTASVEVLTPSARQ 1445

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F+++A    G+GE +          D+P Q PS+  I   
Sbjct: 1446 YTATG-------LKPESIYLFRIMAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVINQE 1497

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY I  R+    ++   +     N    VV     F
Sbjct: 1498 NVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGKWALHSSSVTHNATSFVVDRLKPF 1555

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V++ ND+G
Sbjct: 1556 --TSYKFRVKSTNDIG 1569



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + PG V +    +TS  ++W    +   NG P +  YKI   R++ +    +  
Sbjct: 1178 LQAPPDMAPGNVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYTRSDGHGKTLS-- 1235

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   ++R     E +IE+ L  W+ Y  +V A N +G G P S      T    P  
Sbjct: 1236 -HVVHDRIER-----EYTIED-LEEWTEYRVQVQAFNAIGTG-PWSQIVVGRTRESVPSS 1287

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q +     GN  ++
Sbjct: 1288 GPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVVYKEK-DSDTQPQFWLVEGNSSLS 1346

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPES 976
              ++     Y  YE++V A   +G G  S
Sbjct: 1347 -AQLTGLGRYVLYEIQVLAFTRIGDGTPS 1374



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 27/207 (13%)

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 848
            V   S  + W  G+    P+ +Y I  R   +  W   S  V        T    + + +
Sbjct: 1499 VKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGKWALHSSSV--------THNATSFVVD 1550

Query: 849  VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
             L P+++Y+F+V + N++G  E S  S    T    P +AP+ +         + ISW+P
Sbjct: 1551 RLKPFTSYKFRVKSTNDIGDSEYSEESESLTTLQAAPEEAPTILSVTPHTTTSVLISWQP 1610

Query: 909  LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------------ 956
               +K N   + ++I +R+      +  T++   N       + S +             
Sbjct: 1611 PAEDKINGILLGFRIRYRELLYEGLRGFTMRNINNPSTKWAELTSMYAVRNLSRPSLTQY 1670

Query: 957  -------YTEYEVKVQAINDVGPGPES 976
                   +  YE+++   N VG GP S
Sbjct: 1671 ELDNLSKHKRYEIRMSVYNAVGEGPSS 1697


>gi|26342350|dbj|BAC34837.1| unnamed protein product [Mus musculus]
          Length = 895

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 205/839 (24%), Positives = 341/839 (40%), Gaps = 97/839 (11%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPN 223
           L  LL   R +  G      D +P  PYF  +P      L      N + L+C A G   
Sbjct: 10  LWTLLALHRIHSAGAQ----DDVP--PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWP 59

Query: 224 PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSI 283
             ++W   +                 RF+L    +I +  R     G Y C   N+ G++
Sbjct: 60  LEFKWLHNNR-------------ELTRFSLEYRYMITSLDRT--HAGFYRCIVRNRMGAL 104

Query: 284 ISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEE 341
           +    ++   ++G F  +   +  + N G+A     P  +++P     W RD     +  
Sbjct: 105 LQRQTEVQVAYMGSF--EEGEKRQSVNHGEAAVIRAPRISSFPRPQVTWFRDG--RKIPP 160

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
             R+ ++ +  L   +    DAG Y   VQ+     G N    P+ +      + +  P 
Sbjct: 161 SSRIAITLENTLVILSTVAPDAGRYY--VQAVNDKNGDNKTSQPITLA----VENVGGPA 214

Query: 402 NFPKTF-------PEAPKAGDKVRLECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRI 452
           +                    +V +ECV    P+   +  W + G+PL  ++   ++NR 
Sbjct: 215 DPIAPTIIIPPKNTSVVAGTSEVTMECVVNARPLIKLHIVWKKDGAPL--SSGISDYNRR 272

Query: 453 LTIPNVKVEDQGEYICRA---SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQAD--LT 507
           LTI N  V D G Y C A   S+  + +     +S+   P F +   ++H+  + +  + 
Sbjct: 273 LTIANPTVSDAGYYECEAMLRSSSVAPVTRGAYLSVLEPPQF-VREPERHITAEMEKVVD 331

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567
             C A GVP  + +W+++  L+    L    Q      D  L I  L P+ D  M QC A
Sbjct: 332 IPCRAKGVPPPSITWYKDAALVEVGKLTRFKQR----SDGGLQISGLLPD-DTGMLQCFA 386

Query: 568 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 627
            N      +S  L V ++ P+  + PL+S     +G +V + C    AP+P   W+K   
Sbjct: 387 HNAAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGER 444

Query: 628 IIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
           I+ SG     R  + E+G+LLISP    D+G Y+C ATN  G+DE+   L+V    +   
Sbjct: 445 ILASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRIT 503

Query: 684 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGL 741
           + P   ++       + C    +  + V Y+W  +G  +       +ET P I +D  G 
Sbjct: 504 KPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGS 557

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWT 799
           L I+     D G Y C V S  G  S    + V   P  P      +  V + +  + W 
Sbjct: 558 LHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTWA 617

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYE 857
                  P+  Y +    N N+ W      ++   VD      EA+   V  LVP  +Y+
Sbjct: 618 KPFDGNSPLMRYVLEMSEN-NAPWT-----ILLASVD-----PEATSVMVKGLVPARSYQ 666

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F++ A N++G G+ S  + + + P + P   P  +   G     + I W+P P   QN  
Sbjct: 667 FRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGI 726

Query: 918 NIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
              Y I +         +F++ T  +  N+ +  + I     +T YE++V A N  G G
Sbjct: 727 LKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLG 780


>gi|326663834|ref|XP_683194.5| PREDICTED: protein sidekick-1 [Danio rerio]
          Length = 2183

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 196/796 (24%), Positives = 321/796 (40%), Gaps = 93/796 (11%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
           N + L+C A G     ++W +          ++ +   + R+T      I++  R  ED 
Sbjct: 86  NRLVLTCLAEGSWPLEFKWMRNS-------TDITEYTPEYRYT------IVSLKR--EDA 130

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP--TNYPGVN 327
           G Y C   N+ G++I     +   ++  F      +  +Q  G+A   +PP  T++P   
Sbjct: 131 GVYQCAVRNRMGALIQTRADVRVAYMDNFAELEQRKTVSQ--GRAAVLNPPAVTSFPRPQ 188

Query: 328 YYWARD---YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
             W RD     PN      RV ++ D  L   +    DAG Y     ++ +   +  P  
Sbjct: 189 VTWFRDGVKIIPN-----HRVAITLDNQLVVLSTAAADAGRYYVQAVNERNGENKTSPSI 243

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPK------AGDKVRLECVAFGYPVPSYN--WTRR 436
            L +       +L  P         APK         +  LECVA    +      W R 
Sbjct: 244 YLSIANVIAPAELVAP-----VIVIAPKNTSVVAGASEATLECVANARSLDRLQVFWKRN 298

Query: 437 GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRAS---NDRSALESSVTISIQAEPNFTI 493
           G  L   A  ++F R L I N    D G Y+C A+   + + + E+   +S+   P+FT 
Sbjct: 299 GVRL--TAGVDSFGRRLVISNPTSADGGLYVCEATLRNSSQKSTEAKAYLSVLESPHFTS 356

Query: 494 -PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE--DQDRYFIQDN--V 548
            P      + + ++   C A GVP     WF++        +PL   +  RY +  +  V
Sbjct: 357 KPKRYMIAEVEKNVELQCHAKGVPTPKLEWFKDA-------IPLSTLNNSRYKLTTSSMV 409

Query: 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 608
           L +R + P+ D  ++QC A+N      +   L + ++ P F   P  S+    +G +   
Sbjct: 410 LQVRRIQPD-DAGIFQCFAENTAGEIQAHTNLVITSMSPLFTTPP--SDITVTDGTSAVF 466

Query: 609 FCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVH 664
            C+   APKP  VW+K   ++ SG     R  + E+G L I P+   D+G Y+C A+N  
Sbjct: 467 TCDTSGAPKPAIVWRKGSQVLASGSVQTPRFTLLESGGLQILPIMPSDAGNYTCLASNTE 526

Query: 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724
           G+  +   L VL   ++    P    +       L C+A  +  + V Y W     + G 
Sbjct: 527 GLVNATVALTVLSR-TFISTPPEDQRVIKGTTAVLHCAATHDPRVTVRYSW-----KKGT 580

Query: 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784
             L+      +++  G L+I+     D G+Y C V S  G  S    + V   P  P  +
Sbjct: 581 KPLSVSTGGRVSMKEGSLQISQTWSGDIGDYTCRVISPAGNDSKSARLEVIELPHSPRNL 640

Query: 785 QVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 842
           QV   E    +  + W        P+ HY II  +  NS W              Y    
Sbjct: 641 QVALNETDSRTVLLSWVRPFDGNSPLLHY-IIEFSENNSPW------------KVYMDDV 687

Query: 843 EASIENVLV----PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 898
             ++ ++LV    P  TY+F+V A N++G G+ S+ + +     + P   P  I   G  
Sbjct: 688 SPTLASLLVIGLTPARTYQFRVCAVNQVGRGQYSAETNRLMLREEPPSAPPKNIVASGRT 747

Query: 899 IGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYY 957
              + + W+P P  + N     Y + +R      EFQ   LK   +  I    I     +
Sbjct: 748 NQSIMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGEFQ---LKNITSAEINYCLIGELIIW 804

Query: 958 TEYEVKVQAINDVGPG 973
           T+YE++V A    G G
Sbjct: 805 TQYEIQVAAYTGAGLG 820



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 13/242 (5%)

Query: 740  GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATI 796
            GL  +T  +   A     V ++ VG  ST +T+    PP LPG    + +  +   S TI
Sbjct: 1001 GLTSLTTYALQVA----AVTQAGVGA-STSSTISTGLPPELPGAPSNLVISNISPRSVTI 1055

Query: 797  QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856
            Q++ G+     I+ + +  +          +E  +  E D         I N L+P++ Y
Sbjct: 1056 QFSPGSDGKTEISKWIVEGQVVIVGEEEKEAEWKVLYERDSPPASDTLEIPN-LIPFTQY 1114

Query: 857  EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
             F++   N +G    S  S    T    P  AP+ +         L I WEPLP    N 
Sbjct: 1115 RFRMKQVNIVGSSPFSESSRLMQTLQSSPDVAPTELVVFSASETSLRIRWEPLPEAAYNG 1174

Query: 917  --PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
               ++ Y++  R +    F    ++   +     V +     +T+YE+ +QA N +GPGP
Sbjct: 1175 NPESVGYRV--RAQRADGFGQPRMETVSDRLSCEVTVEGLEEWTDYELSIQAFNSIGPGP 1232

Query: 975  ES 976
             S
Sbjct: 1233 WS 1234



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
            VEG PG P    V +   ++ T+ WT G+    P+T Y I AR +    W    +H+   
Sbjct: 1866 VEGSPGSPLQTSVTK-SASALTLHWTKGSEGAGPVTGYVIEARPSDEGLWDTFVKHLPAG 1924

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
             +  YT   +     V      YEF+VI+ N  GYG+PS PS   +  ++ P+
Sbjct: 1925 SLS-YTISLDRLRSGV-----AYEFRVISVNRFGYGDPSPPSTAMSALSETPF 1971



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 4/134 (2%)

Query: 843  EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
            E ++E  L  W+ YE  + A N +G G P S      T    P  AP  +         +
Sbjct: 1206 EVTVEG-LEEWTDYELSIQAFNSIGPG-PWSSHVLGKTKESVPSGAPENVSAEAMSSTSV 1263

Query: 903  SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 962
             ++W  +P  ++N   + YK+ +R+K+        L       + ++R  S+F  T YE+
Sbjct: 1264 LVTWGSVPEHQKNGHILGYKVLYREKDSDRAPQAHLVNGNQTHMLLLRNLSKF--TVYEI 1321

Query: 963  KVQAINDVGPGPES 976
            +V A   VG GP S
Sbjct: 1322 QVLAFTRVGDGPPS 1335



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 5/122 (4%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            Y   + A N +G    S+P   +   A  P  AP  I         L + W+P P E QN
Sbjct: 1640 YAIVMTAFNVVGESPSSAPVEVFVGEA-APSVAPQNIQVKSVSSNQLDVEWQPPPVETQN 1698

Query: 916  APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
                 YKI +W K    E + E +       + +  + S   YT Y V++ A N  G GP
Sbjct: 1699 GNIQGYKIHYWEKDRQNETEKELVLFVPETCVHLKNLTS---YTSYLVQLSAFNAAGDGP 1755

Query: 975  ES 976
             S
Sbjct: 1756 LS 1757


>gi|334348527|ref|XP_003342071.1| PREDICTED: neuronal cell adhesion molecule [Monodelphis domestica]
          Length = 1174

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 218/859 (25%), Positives = 348/859 (40%), Gaps = 107/859 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+                +  +D+  P  I R     + P D + D  +     +I
Sbjct: 20  ILFLCQVM-----------SALEVPLDLVQPPTITR-----QSPKDYIIDPRE-----NI 58

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV  L +           G L+I+   + + 
Sbjct: 59  EIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPN----------SGTLVISITIEGKA 108

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++  +I     G+++          
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILK-GQSLVLPCRPPLGL 167

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 168 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 226

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK-------VRLECVAFGYPVPSYNWTR 435
             P+ V  HS    ++ P   PK      +   K       + LEC+A G P PS NWT+
Sbjct: 227 --PISVKVHSTKSYIERP---PKLLTPEGRTSHKEELRENVLSLECIAEGLPTPSINWTK 281

Query: 436 RGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIP 494
               LP N  +++NF + L I +V   D G+Y C A N    +E +++++++A P +   
Sbjct: 282 EDGELPINRTFYKNFKKTLNIIHVSEADSGKYKCTARNSLGFVEHTISVTVKAAPYWITA 341

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554
             +  +    D T  C A G P    SW  NG  +  E  P +D  R    D +L     
Sbjct: 342 PRNLVLSPGEDGTLICRANGNPKPNISWLINGVPI--EMAP-DDPSRKIDGDTILFSDVQ 398

Query: 555 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
             E   A+YQC A N+     ++A + VL   P      ++            + C    
Sbjct: 399 --ESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTE-VDLRYQVITDRPAMLDCAFFG 455

Query: 615 APKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
           +P P   W K   G+++         +NG L I    +D +  Y+C   N  GM ++   
Sbjct: 456 SPIPTIEWFKGTKGSVLQEN-TYVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVH 514

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 732
           L V       +Q   KI     R +   C+   +  L     W          D  EL  
Sbjct: 515 LEVKDPTRIIKQPEYKIVQRGGR-VSFECTVKHDPTLIATLTWLK--------DYGEL-- 563

Query: 733 PN---INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
           PN    +ID   L I N S  D   Y CV  +++  +S    + V G           P 
Sbjct: 564 PNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPN 623

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++    + S  + W  G  N  PIT + I     ++    W + ++ V G +   
Sbjct: 624 PPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTD-VPGIQ--- 679

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                  + E  L P+  Y F+VIA N +G   PS  S  Y T A +P + P+ + G G 
Sbjct: 680 ------TTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGS 733

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL     N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 734 EPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 789

Query: 957 YTEYEVKVQAINDVGPGPE 975
              Y VKVQA+N+VG  PE
Sbjct: 790 -VPYLVKVQALNNVGFAPE 807


>gi|194218739|ref|XP_001492769.2| PREDICTED: protein sidekick-1 [Equus caballus]
          Length = 2113

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 191/798 (23%), Positives = 322/798 (40%), Gaps = 61/798 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   D       + L    S+ 
Sbjct: 9   PYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMHND-------SELTTYTSEY 57

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +Q
Sbjct: 58  KYIIPS--------LQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGNFMDTDQRKTVSQ 109

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 369
                +   P T+ P     W R+   + +    R+ ++ +  L   A    D+G Y   
Sbjct: 110 GHAAILNLLPITSCPRPQVTWFREG--HKIIPSNRIAITLENQLVILAAAASDSGPYYVQ 167

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYPV 428
             ++ +   +  P   L V       +   P         +  AG  +V LEC+A   PV
Sbjct: 168 AVNERNGENKTSPLIYLSVARDVGTPETMAPVIVITPGNRSVVAGSSEVTLECIANARPV 227

Query: 429 P--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVTI 483
              S +W R G  +   +   +F R LTI N    D G Y+C A+   SA E   +   +
Sbjct: 228 EDLSVSWKRNGVRI--TSGLHSFGRHLTISNPTSSDTGVYVCEATLRGSAFEPARAKAFL 285

Query: 484 SIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           SI   P FT  P +   ++ +  +   C+A GVP  T  W+++   ++     L++    
Sbjct: 286 SIIEPPYFTAEPESRILVEVEETVDIVCQAMGVPLPTLQWYKDAISISK----LQNPRYK 341

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            +    L I+ L PE D  ++QC A N+     +   L V  + P+F + P++  T   +
Sbjct: 342 VLSSGGLRIQKLRPE-DSGIFQCFATNEGGEIQTHTYLDVTNVAPAFTQLPVD--TTVTD 398

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSC 658
           G    + C    APKP  +WK+  +I+ SG  R     + E+G L I+PV   D+G Y+C
Sbjct: 399 GMTAILKCEVSGAPKPAIMWKRGNHILASGSVRIPRFMLLESGGLQITPVFIQDAGNYTC 458

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N  G   +   L V +  S       ++ I       L C A  +  + + Y+W  +
Sbjct: 459 YAANTEGSLNASAALTVWNRTSIINPPEDRVVIKG-TTATLDCGATHDPRISLRYVWKKD 517

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
            V I     + +    +  DG LL I+     D G+Y C + S  G  S    + V   P
Sbjct: 518 NVVITPSSSSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIISEGGNDSRMARLEVIELP 573

Query: 779 GLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
             P  +   +   H  +  + W        P+ +Y I+  +  NS W  V    +G E+ 
Sbjct: 574 HSPQNLLASLNSAHSHTVMLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSNVGPEMT 631

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
               R        L P  TY+F+V A N++G G+ S+ + +   P + P   P  I   G
Sbjct: 632 GVAVRG-------LTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASG 684

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 955
                + + W+P P  + N     Y + +R      E+Q   +    +  +    +    
Sbjct: 685 RTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTELI 741

Query: 956 YYTEYEVKVQAINDVGPG 973
            +T+YE++V A N  G G
Sbjct: 742 IWTQYEIQVAAYNGAGLG 759



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  + V +   +  T+QWT+G     P T Y I AR +    W      +  K+
Sbjct: 1805 EGSPGAPRHISVTKA-ASELTLQWTEGDAGKAPTTGYVIEARPSDEGLW-----DMFAKD 1858

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A N++GYGEPS PS   +   + P+
Sbjct: 1859 IPRSATSYTVSLDR-LRQGVTYEFRVVAVNQVGYGEPSRPSTAVSAQVETPF 1909



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 36/213 (16%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            EV   S  +QW  G+    PI ++ +    + R  W +   ++S      EV+R      
Sbjct: 1394 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACEVER------ 1447

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
                  L P+++Y+ ++ A N++G  + S  +    T  D P + PS I         + 
Sbjct: 1448 ------LRPFTSYKLRLKATNDIGDSDFSVETEAVTTLQDVPGEPPSFISVTPHTTSSVL 1501

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIA 947
            I W+P   E  N     Y+I++R+   +  +  +S+TLK              +  V  +
Sbjct: 1502 IQWQPPRDESLNGLLQGYRIYYRELEYEAASATESKTLKTPSALRAELTAQSSFKTVNSS 1561

Query: 948  VVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
                  E      Y  YEV + A N +G  P S
Sbjct: 1562 STLTTYELTHLRKYRRYEVVMTAYNIIGESPAS 1594



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 22/230 (9%)

Query: 766  ISTKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIAR-TNWN 820
            + T+    ++  PG P     V  H TS+  IQW    D + NG  +  Y+I  R   + 
Sbjct: 1471 VETEAVTTLQDVPGEPPSFISVTPHTTSSVLIQWQPPRDESLNGL-LQGYRIYYRELEYE 1529

Query: 821  STWFNVSEHVIGKEVDRYTGRKEASIENV-------------LVPWSTYEFKVIAGNELG 867
            +     S+ +      R     ++S + V             L  +  YE  + A N +G
Sbjct: 1530 AASATESKTLKTPSALRAELTAQSSFKTVNSSSTLTTYELTHLRKYRRYEVVMTAYNIIG 1589

Query: 868  YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
                S+P   +   A  P  AP  +         L ++W+P P E QN     YKI++ +
Sbjct: 1590 ESPASAPVEVFVGEA-APALAPQNVQVNPLTASQLEVTWDPPPPESQNGNIQGYKIYYWE 1648

Query: 928  KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              D+  ++E +K       A V++ +   +T+Y V + A N  G GP+S+
Sbjct: 1649 A-DSRNETEKMKVLFLPETA-VKLKNLTSHTKYLVSISAFNAAGDGPKSD 1696



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 39/230 (16%)

Query: 768  TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + I  +        
Sbjct: 962  TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIIEGQVG------ 1015

Query: 825  NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                  IG E   V  Y    E   + +    L P++ Y F++   N +G    S  S  
Sbjct: 1016 -----AIGDEEEWVSLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRV 1070

Query: 878  YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 934
              T    P  AP+ +         L + W PLP  + N    ++ Y+I +WR     + Q
Sbjct: 1071 IQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRP----DLQ 1126

Query: 935  SETLKEYGNVGIAVVRIPSEFYYTEYE------VKVQAINDVGPGPESEV 978
            S  L +  N      R+  EF   E E      +++QA N +G GP SEV
Sbjct: 1127 SPALTQVIND-----RLEREFTIEELEEWTEYELQMQAFNAIGAGPWSEV 1171


>gi|40254254|ref|NP_766388.2| protein sidekick-2 precursor [Mus musculus]
 gi|81893041|sp|Q6V4S5.1|SDK2_MOUSE RecName: Full=Protein sidekick-2; Flags: Precursor
 gi|34101308|gb|AAQ57661.1| sidekick 2 [Mus musculus]
          Length = 2176

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 206/839 (24%), Positives = 342/839 (40%), Gaps = 97/839 (11%)

Query: 164 LHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPN 223
           L  LL   R +  G      D +P  PYF  +P      L      N + L+C A G   
Sbjct: 10  LWTLLALHRIHSAGAQ----DDVP--PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWP 59

Query: 224 PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSI 283
             ++W   +                 RF+L    +I +  R     G Y C   N+ G++
Sbjct: 60  LEFKWLHNNR-------------ELTRFSLEYRYMITSLDRT--HAGFYRCIVRNRMGAL 104

Query: 284 ISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEE 341
           +    ++   ++G F  +   +  + N G+A     P  +++P     W RD     +  
Sbjct: 105 LQRQTEVQVAYMGSF--EEGEKRQSVNHGEAAVIRAPRISSFPRPQVTWFRDG--RKIPP 160

Query: 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN 401
             R+ ++ +  L   +    DAG Y   VQ+     G N    P+ +      + +  P 
Sbjct: 161 SSRIAITLENTLVILSTVAPDAGRY--YVQAVNDKNGDNKTSQPITL----AVENVGGPA 214

Query: 402 NFPKTF-------PEAPKAGDKVRLECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRI 452
           +                    +V +ECVA   P+   +  W + G+PL  ++   ++NR 
Sbjct: 215 DPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPL--SSGISDYNRR 272

Query: 453 LTIPNVKVEDQGEYICRA---SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQAD--LT 507
           LTI N  V D G Y C A   S+  + +     +S+   P F +   ++H+  + +  + 
Sbjct: 273 LTIANPTVSDAGYYECEAMLRSSSVAPVTRGAYLSVLEPPQF-VREPERHITAEMEKVVD 331

Query: 508 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567
             C A GVP  + +W+++  L+    L    Q      D  L I  L P+ D  M QC A
Sbjct: 332 IPCRAKGVPPPSITWYKDAALVEVGKLTRFKQR----SDGGLQISGLLPD-DTGMLQCFA 386

Query: 568 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 627
            N      +S  L V ++ P+  + PL+S     +G +V + C    AP+P   W+K   
Sbjct: 387 HNAAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGER 444

Query: 628 IIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 683
           I+ SG     R  + E+G+LLISP    D+G Y+C ATN  G+DE+   L+V    +   
Sbjct: 445 ILASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRIT 503

Query: 684 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGL 741
           + P   ++       + C    +  + V Y+W  +G  +       +ET P I +D  G 
Sbjct: 504 KPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGS 557

Query: 742 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWT 799
           L I+     D G Y C V S  G  S    + V   P  P      +  V + +  + W 
Sbjct: 558 LHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTWA 617

Query: 800 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYE 857
                  P+  Y +    N N+ W      ++   VD      EA+   V  LVP  +Y+
Sbjct: 618 KPFDGNSPLMRYVLEMSEN-NAPW-----TILLASVD-----PEATSVMVKGLVPARSYQ 666

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917
           F++ A N++G G+ S  + + + P + P   P  +   G     + I W+P P   QN  
Sbjct: 667 FRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGI 726

Query: 918 NIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
              Y I +         +F++ T  +  N+ +  + I     +T YE++V A N  G G
Sbjct: 727 LKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLG 780



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 35/262 (13%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 951  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1007

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+         W  + +  +G E D     +   
Sbjct: 1008 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQ--LGNEPDA----RSME 1061

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1062 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLR 1120

Query: 906  WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 956
            W PLP  + N    ++ YKI + R     +  S T+++         R+  E+       
Sbjct: 1121 WMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQD---------RVEREYTIEDLEE 1171

Query: 957  YTEYEVKVQAINDVGPGPESEV 978
            +TEY V+VQA N +G GP S+ 
Sbjct: 1172 WTEYRVQVQAFNAIGSGPWSQA 1193



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1836 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1892

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1893 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1926



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G P SP  +       P  AP  +         L ++WEP P + QN
Sbjct: 1599 YEIRMSIYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1657

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  +++N TE + +TL    N     V++ +   YT Y V V A N  G 
Sbjct: 1658 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1712

Query: 973  GPES 976
            GP S
Sbjct: 1713 GPRS 1716



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R   +  W     +VS +   
Sbjct: 1406 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1464

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1465 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1512

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1513 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELT 1572

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1573 SLYSMRNLTRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLS 1615



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +T    +  V+     +
Sbjct: 1305 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1363

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            Y       +   L P S Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1364 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1415

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY I  R+     +   +     N     V     F
Sbjct: 1416 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1473

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1474 --TSYKFRVKATNDIG 1487



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI   R++ +    +  
Sbjct: 1096 LQAPPDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLS-- 1153

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             H +   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1154 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 1205

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1206 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1264

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1265 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1293


>gi|354467816|ref|XP_003496364.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1-like [Cricetulus
           griseus]
          Length = 2126

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 197/805 (24%), Positives = 319/805 (39%), Gaps = 73/805 (9%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W   D       + L    S+
Sbjct: 13  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWIHND-------SELTTYSSE 61

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 62  YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGNFMDTDQRKTVS 113

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P  + P     W R+   + +    R+ ++ +  L   A +  DAG Y  
Sbjct: 114 QGHAALLNLVPIISCPRPQVTWFREG--HKIIPSSRIAITLENQLVILATKASDAGAYYV 171

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYP 427
              ++ +   +  PF  L +   +   +   P         +  AG  +  LEC+A   P
Sbjct: 172 QAVNERNGENKTSPFIHLSIARDTGTPEAMAPVIVVAPGNRSVVAGSSETTLECIANARP 231

Query: 428 VP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVT 482
           V   S  W R G  L   +   +F R LTI N    D G Y+C A+   S  E   +   
Sbjct: 232 VEELSLYWKRNGVRL--TSGLHSFGRRLTISNPTSADTGLYVCEATLRGSTFEPARAKAF 289

Query: 483 ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           +SI   P FT  P +    + +  +   C A GVP  T  W+++   LN     L++   
Sbjct: 290 LSIIEPPYFTAEPESRILGEVEESVDIPCRAMGVPLPTLQWYKDAVPLNK----LQNLRY 345

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +    L I+ L+PE D  ++QC A N+     +   L V  + P+F +RP++  T   
Sbjct: 346 RVLPSGSLHIQKLSPE-DSGIFQCFANNEGGEIQTHTYLDVTNIAPAFTQRPVD--TTVT 402

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 657
           +G    + C    APKP   WK+   I+ SG  R     + E+G L I+PV   D+G Y+
Sbjct: 403 DGMTAVLKCEVSGAPKPAITWKRGNLILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYT 462

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N      +   L V +  S       ++ I       L C A  +    + Y+W  
Sbjct: 463 CYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTTLRYVWKK 521

Query: 718 NGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
           +     NM +    +  I +  DG LL I+     D G+Y C + S  G  S    + V 
Sbjct: 522 D-----NMVITPSSSSRIVVEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRTARLEVI 575

Query: 776 GPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW----FNVSEH 829
             P  P  +   +  VH  S T+ W        P+ +Y I+  +  NS W     NVS  
Sbjct: 576 ELPHPPQNLLASLSPVHSHSVTLSWVRPFDGNSPVLYY-IVQLSENNSPWKVHLSNVSPE 634

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
           + G  V              L P  TY+F+V A N++G G+ S+ + +   P + P   P
Sbjct: 635 MTGITVSG------------LTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPP 682

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAV 948
             I   G     + + W+P P  + N     Y + +R      E Q   +    +  +  
Sbjct: 683 KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNY 739

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPG 973
             +     +T+YE++V A N  G G
Sbjct: 740 CLVTDLIIWTQYEIQVAAYNGAGLG 764



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G     P T Y I AR +    W      +  K
Sbjct: 1809 AEGSPGSPRNVLVTK-STSELTLQWTEGNAGNTPTTGYVIEARPSDEGLW-----DMFAK 1862

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R        ++  L    TYEF+V+A N+ G+GEPS PS   +  A+ P+
Sbjct: 1863 DIPRSATSYTVGLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSTAVSAQAEAPF 1914



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 16/148 (10%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 839
            V   EV   S  +QW  G+    PI ++ +  R      W +   ++S       V+R  
Sbjct: 1395 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1452

Query: 840  GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
                      L P+++Y+ ++ A N++G  + S+ +    T  D P + P  +       
Sbjct: 1453 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1502

Query: 900  GDLSISWEPLPREKQNAPNIYYKIFWRK 927
              + I W+P   E  N     Y+I++R+
Sbjct: 1503 SSVLIQWQPPRDESLNGLLQGYRIYYRE 1530



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1583 YEVIMTAYNIIGESPASVPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1641

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YKI++ +  D+  ++E +K    +   VV+I +   +T+Y+V + A N  G GP+
Sbjct: 1642 GNIQGYKIYYWEA-DSRNETEKMKVL-FLPEPVVKIKNLTSHTKYQVSISAFNAAGDGPK 1699

Query: 976  SE 977
            S+
Sbjct: 1700 SD 1701



 Score = 40.0 bits (92), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 28/235 (11%)

Query: 757  CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 813
             V  + VG ++T +T+    PP LPG    + +  +   SAT+Q+  G      I  + +
Sbjct: 957  AVTAAGVG-LTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIV 1015

Query: 814  IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 866
              +              IG E   V  Y    E   + +    L P++ Y F++   N +
Sbjct: 1016 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMRQVNIV 1064

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 923
            G    S  S    T    P  AP+ I         L + W PLP  + N    ++ Y++ 
Sbjct: 1065 GPSPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRVK 1124

Query: 924  FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            +WR    +   ++ + +     +    I     +TEYE+++QA N +G GP SE+
Sbjct: 1125 YWRSDQPSSVLAQVVNDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSEL 1176


>gi|301755691|ref|XP_002913689.1| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion
           molecule-like [Ailuropoda melanoleuca]
          Length = 1304

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 217/875 (24%), Positives = 350/875 (40%), Gaps = 108/875 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALDVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV   + P S        G L IN   + + 
Sbjct: 65  VIQCEAKGKPAPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLTINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++   I  +N G+++          
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQSLILPCRPPLGL 173

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKVFP-------------HSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLNDTEFYSAKSSRERPPTFLTPEGNASHKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P   W +    LP N  +++NF + L I  V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIYWIKEDGTLPINRTFYKNFKKTLQIIQVSEADSGNYQCIAKNSLGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           ++++++A P + +   +  +    D    C A G P    SW  NG  +  E  P +D  
Sbjct: 353 ISVTVKAAPYWIMAPQNLVLSPGEDGRLICRANGNPKPRISWLSNGVPI--EIAP-DDPS 409

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           R    D ++       ER   +YQC A N+     ++A + VL   P        +  Y 
Sbjct: 410 RKIDGDTIIFSSVQ--ERSSVVYQCNASNEYGYLLANAFVNVLAEPPRILT--AANTLYQ 465

Query: 601 GEGGNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                  +  C    +P P   W K     G+  R   +   +NG+L I    +D +G Y
Sbjct: 466 VIADRPALLDCAFFGSPLPTIEWFKGAK--GNALREDSYVFHKNGSLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +       +Q P    +     +   C  + +  L     W 
Sbjct: 524 TCVARNKLGMAKNEVHLEIKDATRIIKQ-PEYAVVQRGGTVSFECRVNHDHTLIPTITWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +   + N            +D   L + +    D G Y CV  +T+  +S    + V  
Sbjct: 583 KDNGELPN-------DGRFTVDKDHLVVADVRDDDGGTYTCVANTTLDNVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WF 824
           P          P  P  +++ +    S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPIYDVPNPPFDLELTDQLDKSVQLSWTPGNDNNSPITKFIIEYEDAMHEAGLWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E              + + +  L P+  Y F+V+A N LG   PS  S QY T A +
Sbjct: 696 HQTE----------VSGMQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAE 745

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P   P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 746 PDTNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 802

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 803 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 835


>gi|291244142|ref|XP_002741959.1| PREDICTED: sidekick 2-like [Saccoglossus kowalevskii]
          Length = 2107

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 213/826 (25%), Positives = 332/826 (40%), Gaps = 98/826 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P   +QP D +   S  +     TL+C A G P   Y+W K      +       PL++ 
Sbjct: 35  PNIYQQPQDRLIAESGAA-----TLTCTASGSPPIKYQWKKGSSYVSQPSPVSYHPLNNV 89

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
                             D G Y+C  SN  GS+IS +  +   +I E+         N 
Sbjct: 90  ---------------DTFDSGEYYCVVSNPVGSVISSAAVVQVAYIREYQGGPTTFSVNA 134

Query: 310 NWGKAMFCDP----PTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 365
            +   + C      P + P  +  W +D FP        V +S D  L   +  + + G 
Sbjct: 135 GYSIELECPQLDTLPDSSPDFHLTWKKDNFP---INGGNVVISLDHKLVILSASESNEGQ 191

Query: 366 YSCNVQSKVSDTG-RNGPFFPLKV---FPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLE 420
           Y C+  + V   G R  P   L V    P S   ++  P   PK        GD  V+LE
Sbjct: 192 YHCSALNTVVGNGMRESPTINLYVNGNRPSSVGPRIIVP---PKD--TVFTQGDPTVQLE 246

Query: 421 CVAFGYPV--PSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRAS---NDRS 475
           C+A   P+      W R G  + ++A     N+++   N    D+G Y C  S   +  S
Sbjct: 247 CIASATPLDLKITLWKRNGMTISQSA-----NKLILF-NPSSIDEGVYECEVSLQYHSYS 300

Query: 476 ALESSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
           ++ ++ TIS++ EP + + P+     D    +   C+A GVP+  Y W++NG  ++  TL
Sbjct: 301 SVRATATISMRTEPVWMLSPVAVTTGDVNEPIEIPCKASGVPEPMYKWYQNG--IDVSTL 358

Query: 535 PLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
                +R+ +     L I  L+ E D AM+QC A N +     S  L+V  L P+    P
Sbjct: 359 ---GNNRFIVLSTGSLQITSLHAE-DQAMFQCFASNVVADISVSTWLQVERLAPNITNPP 414

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG----SGGRRKI---------FEN 640
            ++   AG      + C    +P P  +WKKD  ++G    SG    I           N
Sbjct: 415 NDTSVLAGSTAR--LHCGYSGSPAPDVIWKKDDTVVGRWNGSGSGLGIIPVSSTINVMSN 472

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G+L+IS     DSG+Y+CT  N      +   L V    +     P  + +        +
Sbjct: 473 GDLIISTAKVADSGLYTCTVVNNVASVTASATLTV-QVKTRISDPPKDMEVIKGSTGIFQ 531

Query: 701 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
           C    +  + V  +W  N V I   DL+     ++  DG L +I  A   D G Y C V 
Sbjct: 532 CGVLHDSNVAVRILWLMNNVEI---DLSSSNRISVLYDGSL-KIAGARSDDIGNYTCTVT 587

Query: 761 STVGKIS-TKTTVIVEGP--PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 817
           S  G  + T + V++E P  P     V  ++  + S  +QW +     + I  YK+  + 
Sbjct: 588 SPGGNDARTASLVVIELPFAPQFLHAVLSID-QRRSIDLQWLESFDGNKAILRYKVFRKE 646

Query: 818 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENV-----LVPWSTYEFKVIAGNELGYGEPS 872
           N    W  +  +V               +EN+     L P   Y F V A NELG G  S
Sbjct: 647 NAEIVWTLIMSNV------------APGVENIVTIPDLTPSYQYAFAVSAVNELGEGPLS 694

Query: 873 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
            PS     P + P  AP  +         + I W+  P++K N P   Y+I +R K  + 
Sbjct: 695 DPSNNVTLPVEPPDAAPQGVVASPRSSSSIRIQWQAPPQDKWNGPLTGYRIRYRLKGYSS 754

Query: 933 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
               + ++  N       +     +  YE+++ A N +GPG  S V
Sbjct: 755 -SPYSYQDIYNPQQQSYELTDLITWDTYEIQIAANNSMGPGVYSLV 799



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 108/239 (45%), Gaps = 27/239 (11%)

Query: 755  YECVVKST--VGKISTKTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPI 808
            YE +V ++  +G   T  + I  G PP LP     V +  V   S  IQ+T G      I
Sbjct: 982  YEIMVSASTQMGAGPTVVSTISSGVPPELPTNPVNVVISNVQARSVNIQFTPGYNGKTSI 1041

Query: 809  THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
              +K+ A+ N    W    EH        +       +   L+P++ Y  +V A N +G 
Sbjct: 1042 NTWKVEAQINGAEQWVTHYEH--------HDPDALGFVVPDLLPYTKYILRVTAINVVGA 1093

Query: 869  GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
              PS P+ ++ T  D P  AP+ +         L+ISW PL RE+ N   + Y++ WR K
Sbjct: 1094 SHPSDPTSEFETLQDYPSTAPASVTVRANSETSLTISWIPLTREQWNGVPLGYRVSWRSK 1153

Query: 929  --------NDTEFQSETLKEYGNVG-IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                    ++  FQS  + +Y  +G   V+    E+ +  YEVKV A N  G GP S++
Sbjct: 1154 PTVVKRSLSNGYFQSVNIDDY--IGRTYVIEDLEEWMW--YEVKVLAYNAKGNGPYSDI 1208



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 113/292 (38%), Gaps = 43/292 (14%)

Query: 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF 543
           ++   PN      D+ +      T TC A G P + Y W + G    S+  P+     Y 
Sbjct: 30  AVLVPPNIYQQPQDRLIAESGAATLTCTASGSPPIKYQW-KKGSSYVSQPSPVS----YH 84

Query: 544 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 603
             +NV T        D   Y C   N + +  SSA +  +     ++  P      AG  
Sbjct: 85  PLNNVDTF-------DSGEYYCVVSNPVGSVISSAAVVQVAYIREYQGGPTTFSVNAGY- 136

Query: 604 GNVTIFCN-----PEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
            ++ + C      P+++P     WKKD N   +GG   I  +  L+I   S  + G Y C
Sbjct: 137 -SIELECPQLDTLPDSSPDFHLTWKKD-NFPINGGNVVISLDHKLVILSASESNEGQYHC 194

Query: 659 TATNV---HGMDESKGRLIVLHG--PSYYEQ---LPPKITIAAHRN--LQLRCSAHTEEL 708
           +A N    +GM ES    + ++G  PS       +PPK T+    +  +QL C A    L
Sbjct: 195 SALNTVVGNGMRESPTINLYVNGNRPSSVGPRIIVPPKDTVFTQGDPTVQLECIASATPL 254

Query: 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
                +W  NG+ I                   L + N S  D G YEC V 
Sbjct: 255 DLKITLWKRNGMTISQ-------------SANKLILFNPSSIDEGVYECEVS 293



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 84/424 (19%), Positives = 135/424 (31%), Gaps = 76/424 (17%)

Query: 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL--PRNA 444
            +FP ++   L  PN + +             L C A G P   Y W +  S +  P   
Sbjct: 22  SIFPITSNAVLVPPNIYQQPQDRLIAESGAATLTCTASGSPPIKYQWKKGSSYVSQPSPV 81

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI--------------SIQAEPN 490
            +   N      NV   D GEY C  SN   ++ SS  +              +      
Sbjct: 82  SYHPLN------NVDTFDSGEYYCVVSNPVGSVISSAAVVQVAYIREYQGGPTTFSVNAG 135

Query: 491 FTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT 550
           ++I L    +D   D +        PD   +W +       +  P+   +     D+ L 
Sbjct: 136 YSIELECPQLDTLPDSS--------PDFHLTWKK-------DNFPINGGNVVISLDHKLV 180

Query: 551 IRYLNPERDPAMYQCRAKNQL----------------KTRYSSAQLRVLTLKPSFKKRPL 594
           I   + E +   Y C A N +                  R SS   R++         P 
Sbjct: 181 ILSAS-ESNEGQYHCSALNTVVGNGMRESPTINLYVNGNRPSSVGPRIIV--------PP 231

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSGGRRKIFENGNLLISPVSRDD 652
           +   +      V + C   A P    +  WK++G  I     + I  N        S  D
Sbjct: 232 KDTVFTQGDPTVQLECIASATPLDLKITLWKRNGMTISQSANKLILFNP-------SSID 284

Query: 653 SGIYSC-TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 711
            G+Y C  +   H     +    +         L P        N  +        + + 
Sbjct: 285 EGVYECEVSLQYHSYSSVRATATISMRTEPVWMLSPVAVTTGDVNEPIEIPCKASGVPEP 344

Query: 712 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            Y W  NG+ +  +  N      I +  G L+IT+    D   ++C   + V  IS  T 
Sbjct: 345 MYKWYQNGIDVSTLGNNRF----IVLSTGSLQITSLHAEDQAMFQCFASNVVADISVSTW 400

Query: 772 VIVE 775
           + VE
Sbjct: 401 LQVE 404



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 90/223 (40%), Gaps = 27/223 (12%)

Query: 767  STKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNW 819
            S   T + + P   P    V+    TS  + W        +G  NG  I  YKI+ + ++
Sbjct: 1484 SEPITTLQDFPEDSPTITDVIPYTATSLRVIWRPPASEDINGILNGFKI-QYKILRQISY 1542

Query: 820  NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 879
                    EHVI     R     + SI      +  YE  +   N +G G PS+P   Y 
Sbjct: 1543 -------MEHVISDTRLRQFDLTDLSI------YENYEIVMRVFNIIGEGPPSAPYTIYV 1589

Query: 880  TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND----TEFQS 935
              A  P  AP  +         + ++W+  P   QN     YKIF+ K +D     + + 
Sbjct: 1590 GEA-IPTAAPDDVSAVPIGPTQIRVTWKEPPENTQNGGLQGYKIFYWKVSDEGDNIDNEH 1648

Query: 936  ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
            + ++  G V +  V +     YT Y+++V   N  G GP+S V
Sbjct: 1649 QMMRPVG-VELTEVLLDQLVSYTNYKIQVLGFNAAGDGPKSAV 1690



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 82/212 (38%), Gaps = 23/212 (10%)

Query: 777  PPGLPGGVQVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
            P   P  V V    +TS TI W   T    NG P+ +     R +W S    V   +   
Sbjct: 1110 PSTAPASVTVRANSETSLTISWIPLTREQWNGVPLGY-----RVSWRSKPTVVKRSLSNG 1164

Query: 834  -----EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
                  +D Y GR    IE+ L  W  YE KV+A N  G G P S   +  T    P   
Sbjct: 1165 YFQSVNIDDYIGRTYV-IED-LEEWMWYEVKVLAYNAKGNG-PYSDIIEERTGDSVPSAG 1221

Query: 889  PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV---G 945
            P  +         + I+W  +P+  QN   + YK+ + +     F      EY ++    
Sbjct: 1222 PQNVVAVSTGSTTIDIAWVDIPQSDQNGEILGYKVLYCES----FADVDSCEYYDITDNS 1277

Query: 946  IAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
                R+ +   Y  Y+++V     +G G  SE
Sbjct: 1278 SRSTRLSNLKKYVTYDIQVLGYTRIGNGVLSE 1309



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 13/132 (9%)

Query: 850  LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 909
            L P+STY+F+V A N++G    S PS    T  D P  +P+           L + W P 
Sbjct: 1459 LSPYSTYQFRVQAHNDVGASYYSIPSEPITTLQDFPEDSPTITDVIPYTATSLRVIWRPP 1518

Query: 910  PREKQNAP----NIYYKIFWRKKNDTEFQSET-LKEYGNVGIAVVRIPSEFYYTEYEVKV 964
              E  N       I YKI  +        S+T L+++    +++        Y  YE+ +
Sbjct: 1519 ASEDINGILNGFKIQYKILRQISYMEHVISDTRLRQFDLTDLSI--------YENYEIVM 1570

Query: 965  QAINDVGPGPES 976
            +  N +G GP S
Sbjct: 1571 RVFNIIGEGPPS 1582


>gi|345801458|ref|XP_547004.3| PREDICTED: protein sidekick-1 [Canis lupus familiaris]
          Length = 2114

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 187/798 (23%), Positives = 320/798 (40%), Gaps = 61/798 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   D       + L    S+ 
Sbjct: 8   PYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMHND-------SELTTYTSEY 56

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +Q
Sbjct: 57  KYIIPS--------LQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGNFMDTDQRKTVSQ 108

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 369
                +   P T+ P     W R+   + +    R+ ++ +  L   A    D G Y   
Sbjct: 109 GHAAVLNLLPITSCPRPQVTWFREG--HKIIPSHRIAITLENQLVILATTAGDTGAYYAQ 166

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYPV 428
             ++ +   +  P   L +       +   P         +  AG  ++ LEC+A   P+
Sbjct: 167 AVNERNGENKTSPLIHLSIARDVGTPETMAPVIVVPPGNRSVVAGSSEITLECIANARPI 226

Query: 429 PSY--NWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT---I 483
                NW R G  +  +    +F R LTI N    D G Y+C A+   S  +++     +
Sbjct: 227 QELHVNWKRNGVRI--SGGLHSFGRHLTISNPTSADTGLYVCEATLSGSTFDAATAKAFL 284

Query: 484 SIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           SI   P FT  P +   ++ +  +   C A GVP  T  W+++   ++     L++    
Sbjct: 285 SIIEPPYFTAEPESRILVEVEETVDIVCRAMGVPLPTLQWYKDAISISK----LQNPRYK 340

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            +    L I+ L PE D  ++QC A N+     +   L V  + P+F + P++  T   +
Sbjct: 341 MLSSGGLRIQKLRPE-DSGIFQCFASNEGGEIQTYTYLDVTNVAPAFTQLPVD--TTVTD 397

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSC 658
           G   T+ C    APKP   W++  +I+ SG  R     + E+G L I+PVS  D+G Y+C
Sbjct: 398 GMTATLRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLESGGLQIAPVSIQDAGNYTC 457

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N+ G   +   L V +  ++    P    +       LRC A  +  + + Y+W  +
Sbjct: 458 YAANMEGSLNASAALTVWNR-TFIINPPEDRVVIKGTTATLRCGATHDPRITLRYVWKKD 516

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
              I     + +    +  DG LL I+     D G+Y C + S  G  S    + V   P
Sbjct: 517 NTVITPSSSSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIISEGGNDSRTARLEVIELP 572

Query: 779 GLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
             P  +       H  +  + W        P+ +Y I+  +  NS W  V    +G E+ 
Sbjct: 573 HSPQNLLATLNSSHSHTVMLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSNVGPEMT 630

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
             T R        L P  TY+F+V A N++G G+ S+ + +   P + P   P  I   G
Sbjct: 631 GITVRG-------LTPARTYQFRVCAVNQVGRGQYSAETSRLMLPEEPPSAPPKNIVASG 683

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 955
                + + W+P P  + N     Y + +R      E Q   +    +  +    +    
Sbjct: 684 RTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIT---SPEVNYCLVTELI 740

Query: 956 YYTEYEVKVQAINDVGPG 973
            +T+YE++V A N  G G
Sbjct: 741 IWTQYEIQVAAYNGAGLG 758



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G     P T Y I AR +    W      +  K+
Sbjct: 1804 EGSPGSPRDVLVTK-SASELTLQWTEGNAGRTPTTGYVIEARPSDEGLW-----DMFVKD 1857

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A N+ GYGEPSSPS   +T  + P+
Sbjct: 1858 IPRSATSYSVSLDK-LRQGVTYEFRVVAVNQAGYGEPSSPSMAVSTQVETPF 1908



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 39/239 (16%)

Query: 757  CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 813
              V +    ++T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +
Sbjct: 950  AAVTTAGAGLATSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1009

Query: 814  IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 866
              +              IG E   V  Y    E   + +    L P++ Y F++   N +
Sbjct: 1010 EGQVG-----------AIGDEEEWVSLYEEENEPDAQTLEIPNLTPYTHYRFRMRQVNIV 1058

Query: 867  GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 923
            G    S  S    T    P  AP+ +         L + W PLP  + N    ++ Y+I 
Sbjct: 1059 GSSPVSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1118

Query: 924  FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPES 976
            +WR     + Q+ +L +  N      R+  EF       +TEYE+++QA N +G GP S
Sbjct: 1119 YWRP----DLQAPSLTQVIN-----DRLEREFTIEGLEEWTEYELQMQAFNAIGAGPWS 1168



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 20/223 (8%)

Query: 758  VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYK 812
            +V S+    S++    ++ PP + P  V V    +TS  ++W    D   NG P +  Y+
Sbjct: 1057 IVGSSPVSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYR 1116

Query: 813  IIARTNWNSTWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            I     W       S   VI   ++R     E +IE  L  W+ YE ++ A N +G G P
Sbjct: 1117 I---KYWRPDLQAPSLTQVINDRLER-----EFTIEG-LEEWTEYELQMQAFNAIGAG-P 1166

Query: 872  SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-D 930
             S + +  T    P  AP  +         + ++W  +P + QN   + YK+ +R K+ D
Sbjct: 1167 WSVAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLFRAKDLD 1226

Query: 931  TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
             E +S  ++  GN   + + +     +  YE++V A   +G G
Sbjct: 1227 PEPRSHVVR--GNHSQSAL-LAGLRKFVLYELQVLAFTRIGNG 1266



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 36/213 (16%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            EV   S  +QW  G+    PI ++ +    + R  W +   ++S       V+R      
Sbjct: 1393 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACAVER------ 1446

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
                  L P+++Y+ ++ A N++G  + S+ +    T  D P + PS I         + 
Sbjct: 1447 ------LRPFTSYKLRLKATNDIGDSDFSAETDAVTTLQDVPGEPPSFISVTPHTTSSVL 1500

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIA 947
            I W P   E  N     Y+I++R+   +      S+TLK              +  V  +
Sbjct: 1501 IQWRPPRDESLNGLLQGYRIYYRELESEASAATVSKTLKTPSALRAELTAQSSFKTVNSS 1560

Query: 948  VVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
                  E      Y  YEV + A N +G  P S
Sbjct: 1561 STLTTYELTHLKKYRRYEVILTAYNIIGESPAS 1593



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 19/130 (14%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  I         L ++W+P P E QN
Sbjct: 1577 YEVILTAYNIIGESPASAPVEVFVGEA-APAMAPQNIQVTPLTASQLEVTWDPPPPESQN 1635

Query: 916  APNIYYKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
                 YK+++     +N+TE     F  ET+          V++ +   +T+Y V + A 
Sbjct: 1636 GNIQGYKVYYWEAESQNETEKMKVLFLPETM----------VKLKNLTSHTQYLVSISAF 1685

Query: 968  NDVGPGPESE 977
            N  G GP+S+
Sbjct: 1686 NAAGDGPQSD 1695


>gi|350591360|ref|XP_003132375.3| PREDICTED: contactin-3 [Sus scrofa]
          Length = 840

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 193/709 (27%), Positives = 288/709 (40%), Gaps = 74/709 (10%)

Query: 312 GKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNV 370
           G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GNY+C V
Sbjct: 21  GVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVETSDVGNYTCVV 80

Query: 371 QSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
            S V++    G   PL +       +   K    FP+T P A   G  V+LEC A G PV
Sbjct: 81  TSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFALGNPV 138

Query: 429 PSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487
           P  NW R  G P         F+ +L IPN + ED G Y C A N R    +   ++   
Sbjct: 139 PQINWRRSDGLPFSNKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYG 198

Query: 488 EPN--------FTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
           EP+        F + + D + +         +A   P V  +   + E   +  L L   
Sbjct: 199 EPSLECIGFLAFALSI-DCYREIDELFLRIGDADVSPAVHSTCIMHCEFRKTSHL-LNLD 256

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           +R  I++  LTI  LN   D  M+QC A+N+    YSSA+L+V+   P F K P++    
Sbjct: 257 ERIQIENGALTISNLN-VTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKTPMKKLIQ 315

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---------------NGNLL 644
              G  V++ C P A+P+    WKK   ++    R  + +               +G+L+
Sbjct: 316 VQVGSEVSLDCKPRASPRALSSWKKGDVLVQETDRYSVVQKDDGPHLCREEGQESSGDLM 375

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I  +    SG Y C          S   LIV   P   E +  K+        QL     
Sbjct: 376 IRNIQLKHSGRYVCMVQTEVDSVSSAADLIVRGSPGPPENV--KVDEITDTTAQLSWKEG 433

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKST 762
           T+    V                     P + IDG     T        EYE   V  + 
Sbjct: 434 TDNHSPVISYSVQARTPFSVGWQTATTVPEV-IDGKTHTATVVELNPWVEYEFRVVASNK 492

Query: 763 VG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP--- 807
           +G         K+ T+  V    P  + GG       ++   I W    +   NG     
Sbjct: 493 IGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEELQNGEGFGY 548

Query: 808 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 867
           +  ++ +  TNW      +   V   +  RY  R ++     ++P+S YE KV   N  G
Sbjct: 549 VVAFRPLGVTNW------IQTVVTSPDTPRYVFRNDS-----ILPFSLYEVKVGVYNNKG 597

Query: 868 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            G P SP     +  ++P  APS++        ++ +SW  +P +  N   + Y++ +  
Sbjct: 598 EG-PFSPVTAVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAVPWKLSNGHLLGYELRYWN 656

Query: 928 KNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGP 974
               E  S  LK  GNV  A +R + S   YYT     V+A N  G GP
Sbjct: 657 NGGEEESSSKLKVAGNVTSARLRGLKSNLAYYT----AVRAFNSAGTGP 701



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 172/366 (46%), Gaps = 16/366 (4%)

Query: 622 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
           ++K  +++    R +I ENG L IS ++  DSG++ C A N HG+  S   L V+     
Sbjct: 246 FRKTSHLLNLDERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPD 304

Query: 682 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD----LNELETPNI-- 735
           + + P K  I      ++               W    V +   D    + + + P++  
Sbjct: 305 FSKTPMKKLIQVQVGSEVSLDCKPRASPRALSSWKKGDVLVQETDRYSVVQKDDGPHLCR 364

Query: 736 ---NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 792
                  G L I N     +G Y C+V++ V  +S+   +IV G PG P  V+V E+  T
Sbjct: 365 EEGQESSGDLMIRNIQLKHSGRYVCMVQTEVDSVSSAADLIVRGSPGPPENVKVDEITDT 424

Query: 793 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 852
           +A + W +G  N  P+  Y + ART ++  W   +   + + +D   G+   +    L P
Sbjct: 425 TAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNP 479

Query: 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 912
           W  YEF+V+A N++G GEPS PS +  T    P   PS + GGGG   +L I+W+P+P E
Sbjct: 480 WVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEE 539

Query: 913 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
            QN     Y + +R    T +  +T+    +    V R  S   ++ YEVKV   N+ G 
Sbjct: 540 LQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNDSILPFSLYEVKVGVYNNKGE 598

Query: 973 GPESEV 978
           GP S V
Sbjct: 599 GPFSPV 604



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 80/205 (39%), Gaps = 24/205 (11%)

Query: 591 KRPLESETYAGEGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLIS 646
           K  + S     EG  V + C P          +++ +  + +    RR +  E G+L I+
Sbjct: 7   KTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIA 66

Query: 647 PVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRN 696
            V   D G Y+C    T TN   +      ++   G      P    Q P  +  A    
Sbjct: 67  KVETSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGST 126

Query: 697 LQLRCSAHTEELLDVAYIWTHNGVRIGN-MDLNELETPNINIDGGLLEITNASFADAGEY 755
           ++L C A    +  + +    +G+   N + L +          G+LEI N    DAG Y
Sbjct: 127 VKLECFALGNPVPQINW-RRSDGLPFSNKIKLRKF--------SGVLEIPNFQQEDAGSY 177

Query: 756 ECVVKSTVGKISTKTTVIVEGPPGL 780
           EC+ +++ GK   +  +   G P L
Sbjct: 178 ECIAENSRGKNVARGRLTYYGEPSL 202


>gi|395533097|ref|XP_003768600.1| PREDICTED: protein sidekick-2 [Sarcophilus harrisii]
          Length = 2153

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 196/809 (24%), Positives = 327/809 (40%), Gaps = 83/809 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 8   PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 50

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 51  KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 106

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P  +++P     W RD     +    R+ ++ D  L   +    DAG Y 
Sbjct: 107 SHGEAAVIKAPRISSFPQPQVTWFRDG--RKIPPSSRIAITLDNTLVILSTVAPDAGRY- 163

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-------PEAPKAGDKVRLE 420
             VQ+     G N    P+ +      + +  P +                    +V +E
Sbjct: 164 -YVQAVNDKNGDNKTSQPITL----TVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTME 218

Query: 421 CVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           CVA   P+   +   +   +P +    + NR LTI N K  + G Y C A    S++ S 
Sbjct: 219 CVANARPLIKLHIIWKKDGVPVSGGISDHNRRLTILNPKGSNTGYYECEAVLRSSSVPSV 278

Query: 481 V---TISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           V    +S+   P F I   ++H+  + +  +   C+A GVP    +W+++  +++ + L 
Sbjct: 279 VRGAVLSVLEPPQF-IKEPERHITAEMEKVVDIPCQAKGVPSPITTWYKDAAVIDVKKL- 336

Query: 536 LEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
                R+ +  D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + PL
Sbjct: 337 ----SRFRLHGDGSLQISGLVPD-DTGMFQCFARNSAGEVQTSTYLAVTSIAPNITRGPL 391

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSR 650
           +S     +G +V + C    AP+P   W+K   I+ SG     R  + E+G+LLISP   
Sbjct: 392 DSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSIQLPRFTLLESGSLLISPTRI 449

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D+G Y+C ATN  G+DE+   LIV    +     P   ++       + C    +  + 
Sbjct: 450 SDAGSYTCLATNSRGVDEASADLIVW-ARTRITMAPQDQSVIKGTKAFMTCGVTHDPSVS 508

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTK 769
           + YIW  +G  I    +     P + +D  G L I+     D G Y C V S  G  S  
Sbjct: 509 IRYIWEKDGAVISVDSI-----PRMRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSKS 563

Query: 770 TTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
             + V   P  P      +    + S  + W        P+ HY +    N N+ W    
Sbjct: 564 AYLRVRQLPHAPEHPMATLSTAERRSINLTWAKPFDGNSPLIHYVLEMSEN-NAPW---- 618

Query: 828 EHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
             V+   VD      EA+   V  LVP  +Y+F++ A N++G G+ S  + + + P + P
Sbjct: 619 -TVLLPSVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPP 672

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNV 944
              P  +   G     + I W+P P   QN     Y I F        +Q    +   N 
Sbjct: 673 TAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRFCLAGLPVGYQ---FRNITNA 729

Query: 945 GIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            +  + +     +T YE+ V A N  G G
Sbjct: 730 DVNNLLLEELIIWTNYEISVAAYNSAGLG 758



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 33/261 (12%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 929  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 985

Query: 789  VHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + +   +A       W  +  H +  E D     +   
Sbjct: 986  IGPRSVTLQFRPGYDGKTSISRWLVEAQVAVVGEGEEWLLI--HQLTNEPDA----RSME 1039

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + N L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1040 VPN-LNPYTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1098

Query: 906  WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 957
            W PLP  + N    ++ YKI   K   ++   +TL       +   RI  E+       +
Sbjct: 1099 WMPLPEMEYNGNPESVGYKI---KYTRSDGHGKTLSH-----VVHDRIEREYTIEDLEEW 1150

Query: 958  TEYEVKVQAINDVGPGPESEV 978
            TEY V+VQA N +G GP S++
Sbjct: 1151 TEYRVQVQAFNAIGTGPWSQI 1171



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G  SSP   +   A  P   P  +   G     L ++WEP P E QN
Sbjct: 1577 YEIRMSVYNAVGEGPSSSPQEVFVGEA-VPTAPPQNVAVHGATATQLDVTWEPPPLEAQN 1635

Query: 916  APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW  +++N TE  ++  L E G      V++ +   YT Y V V A N  G
Sbjct: 1636 GDIQGYKIYFWEAQRRNSTERLKTLFLPENG------VKLKNLTGYTAYLVSVAAFNAAG 1689

Query: 972  PGPES 976
             GP S
Sbjct: 1690 DGPRS 1694



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1814 IIIRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1870

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L    +Y+F+VIA N+ GYG PSSPS   + PA K
Sbjct: 1871 ---ILKHGVSYDFRVIAVNDYGYGTPSSPS--QSVPAQK 1904



 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   +     I  Y+I  R N  +T    S  V+     +
Sbjct: 1283 PGPPMGILFPEVRPTSVRLIWQPPSAPNGIILAYQITHRLN-TTTANTASVEVLTPSARQ 1341

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F+++A    G+GE +          D+P Q PS+  I   
Sbjct: 1342 YTATG-------LKPESIYLFRIMAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVINQE 1393

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY I  R+  + ++   +     N    VV     F
Sbjct: 1394 NVKARSVLLSWE--PGSDGLSPVRYYTIQSRELPNGKWALHSSSVTHNATSFVVDRLKPF 1451

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V++ ND+G
Sbjct: 1452 --TSYKFRVKSTNDIG 1465



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 27/207 (13%)

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 848
            V   S  + W  G+    P+ +Y I +R   N  W   S  V        T    + + +
Sbjct: 1395 VKARSVLLSWEPGSDGLSPVRYYTIQSRELPNGKWALHSSSV--------THNATSFVVD 1446

Query: 849  VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
             L P+++Y+F+V + N++G  E S  S    T    P +AP+ +         + ISW+P
Sbjct: 1447 RLKPFTSYKFRVKSTNDIGDSEYSEESESLTTLQAAPEEAPTILSVTPHTTTSVLISWQP 1506

Query: 909  LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------------ 956
               +K N   + ++I +R+      +  T++   N       + S +             
Sbjct: 1507 PAEDKINGILLGFRIRYRELLYEGLRGFTMRNINNPSTKWAELTSMYAVRNLSRPSLTQY 1566

Query: 957  -------YTEYEVKVQAINDVGPGPES 976
                   +  YE+++   N VG GP S
Sbjct: 1567 ELDNLSKHKRYEIRMSVYNAVGEGPSS 1593



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 18/209 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI   R++ +    +  
Sbjct: 1074 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYTRSDGHGKTLS-- 1131

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   ++R     E +IE+ L  W+ Y  +V A N +G G P S      T    P  
Sbjct: 1132 -HVVHDRIER-----EYTIED-LEEWTEYRVQVQAFNAIGTG-PWSQIVVGRTRESVPSS 1183

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q +     GN  ++
Sbjct: 1184 GPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVVYKEK-DSDTQPQFWLVEGNSSLS 1242

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPES 976
              ++     Y  YE++V A   +G G  S
Sbjct: 1243 -AQLTGLGRYVLYEIQVLAFTRIGDGTPS 1270


>gi|324502734|gb|ADY41201.1| Neuroglian [Ascaris suum]
          Length = 1047

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 185/678 (27%), Positives = 298/678 (43%), Gaps = 50/678 (7%)

Query: 317 CDPPTNYPGVNYYWA-RDYF-PNFVEEDKRVFVSYD--GALYFSALEQIDAGN---YSCN 369
           C+ P   P  + +W  RD    + +E  +R  ++ D  G L+F+ + Q D      Y C 
Sbjct: 13  CNVPHGIPSPSVFWLYRDTVQTSIIETIRRPHIAVDPQGTLHFTEVRQHDGRTNLLYQCA 72

Query: 370 VQSKV-SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
             S V     R G    L V P      +     +        +AG +++L C+  G P+
Sbjct: 73  ATSPVLHGEYRAGDEVQLVVTPSPTDVGVAVHKLWFSPDEVNVRAGSRLKLMCIFGGRPL 132

Query: 429 PSYNWTRRGSPLPRNAYFE------NFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482
           PS  W+R    LP+    +      +F + L + NV  +D G Y CR+ +    L   + 
Sbjct: 133 PSVTWSRIDGELPKKRMKDLTSPESDFGKALIVDNVHPDDAGIYECRSQH----LFHQMH 188

Query: 483 ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           + + A P +   P +D     ++     C A G P     W+ NG+ L+     + + +R
Sbjct: 189 VYVTAAPYWDFEPPSDIDQAEESTAELHCIASGSPTPIIQWYMNGKPLHE----VAENER 244

Query: 542 YFIQD--NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
             I D   +L I  L+ + D A+YQC A N L   +++A + V    P FK  P      
Sbjct: 245 RLILDGGRILRINNLDHDVDTAVYQCNASNSLGYIFANAFVNVRAHAPRFKM-PDRRIWK 303

Query: 600 AGEGGNVTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 657
                 V + C+ +AAP+    W    D +I    G+ ++F N  L I+ V+  D G+Y 
Sbjct: 304 VVRKTTVEMSCDVDAAPEAVVRWVDANDQSIAIIPGKIQLFPNHTLRITQVNSADEGLYY 363

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIW 715
           C  +N +G++ +  +L V + P+++ ++P   K  + AH +  L C A T+  L+  Y W
Sbjct: 364 CNVSNKYGINRAYNKLEVFN-PTHFVRVPSPKKSVVEAHESFNLFCEAVTDPRLNADYTW 422

Query: 716 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
           THNGV I   D     T N       L + +     +G  +CVV + V    +   +IV 
Sbjct: 423 THNGVPIN--DSEHFRTTNTT-----LHLEDVRGWHSGSIDCVVVTDVDVKVSGIELIVL 475

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKE 834
             P  P  +  V+ ++  A I+W   + +G  IT + +   T++    W  V E     E
Sbjct: 476 DVPARP-ILSEVDCNERRAMIRWQRSSDHGDKITSFLVQMHTDFEKGKWQTVLE-----E 529

Query: 835 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAPSRIG 893
            +  T   +A I   L PW  Y F+VIA N  G  +P         T    PY  PS + 
Sbjct: 530 ENTSTDFYQADI--TLSPWVNYTFRVIAKNSHGESDPGYKDGAICRTKESFPYGNPSNVT 587

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 953
             G +  +L I W P+ + + NAP+++Y + +R         ET  E       V+R   
Sbjct: 588 AEGNEPNNLVIRWIPMDKYEWNAPDLHYIVRYRLNQQGAQWKETHIEDPLANHTVIRDQP 647

Query: 954 EFYYTEYEVKVQAINDVG 971
            F   EY V+V+A+N VG
Sbjct: 648 TF--KEYIVQVEAVNRVG 663



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 98/253 (38%), Gaps = 26/253 (10%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLI-INDPRQVEDRGSY 272
           L C A G P P  +W+        +  N      ++R  L GG ++ IN+     D   Y
Sbjct: 215 LHCIASGSPTPIIQWYMNGKPLHEVAEN------ERRLILDGGRILRINNLDHDVDTAVY 268

Query: 273 HCKASNKFGSIISESVQLAFGFIGEFNL--KRAPEIGNQNWGKAMFCDPPTNYPGVNYYW 330
            C ASN  G I + +          F +  +R  ++  +     M CD     P     W
Sbjct: 269 QCNASNSLGYIFANAFVNVRAHAPRFKMPDRRIWKVVRKT-TVEMSCDVDAA-PEAVVRW 326

Query: 331 --ARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
             A D     +    ++F ++   L  + +   D G Y CNV +K    G N  +  L+V
Sbjct: 327 VDANDQSIAIIPGKIQLFPNH--TLRITQVNSADEGLYYCNVSNKY---GINRAYNKLEV 381

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRNAYF 446
           F  ++F ++  P           +A +   L C A   P     Y WT  G P+  + +F
Sbjct: 382 FNPTHFVRVPSPKK------SVVEAHESFNLFCEAVTDPRLNADYTWTHNGVPINDSEHF 435

Query: 447 ENFNRILTIPNVK 459
              N  L + +V+
Sbjct: 436 RTTNTTLHLEDVR 448


>gi|351701670|gb|EHB04589.1| Protein sidekick-2, partial [Heterocephalus glaber]
          Length = 2137

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 204/821 (24%), Positives = 341/821 (41%), Gaps = 104/821 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 5   PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 47

Query: 250 RFTLSGGNLIINDPRQVE------DR---GSYHCKASNKFGSIISESVQLAFGFIGEFNL 300
           +F+L        + RQVE      DR   G Y C   N+ G+++    ++   ++G F  
Sbjct: 48  KFSL--------EYRQVEYMITSLDRTHAGFYRCVVRNRMGALLQRQTEVQVAYMGSF-- 97

Query: 301 KRAPEIGNQNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSAL 358
           +   +  + + G+A     P   ++P     W RD     +    R+ ++ +  L   + 
Sbjct: 98  EEGEKHQSISHGEAAVIRAPRIASFPRPQVTWFRDG--RKIPPSSRIAITLENTLVILST 155

Query: 359 EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN-FPKTFPEAPK----- 412
              DAG Y   VQ+     G N    P+ +      + +  P +    T    PK     
Sbjct: 156 VAPDAGRY--YVQAVNDKNGDNKTSQPITL----AVENVGGPADPIAPTIIVPPKNTSVV 209

Query: 413 AG-DKVRLECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           AG  +V +ECVA   P+   +  W + G+ +  ++   ++NR LTIPN  V D G Y C 
Sbjct: 210 AGTSEVTMECVANARPLTKLHIIWKKGGAQV--SSGLSDYNRRLTIPNPTVGDAGYYQCE 267

Query: 470 ASNDRSALESSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFR 524
           A    S++  +V    +S+   P F +   ++H+  + +  +   C A GVP  + +W++
Sbjct: 268 AVLRSSSVAPAVRGAHLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPAPSITWYK 326

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           +  ++  E L    Q      D  L I  L P+ D  M+QC A+N      +S  L V +
Sbjct: 327 DAAVVEVEKLARFRQR----GDGGLQISGLVPD-DTGMFQCFARNSAGEVQTSTYLAVTS 381

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFEN 640
           + P+  + PL+S     +G +V + C    AP+P   W+K   I+ SG     R  + E+
Sbjct: 382 IAPNITRGPLDSTVI--DGTSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLES 439

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G+LLISP    D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + 
Sbjct: 440 GSLLISPTHISDAGSYTCLATNSRGVDEASADLVVW-ARTRITRPPQDQSVIKGTQASMV 498

Query: 701 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVV 759
           C    +  + + Y+W  +G  +  M+ N    P I +D  G L IT     D G Y C V
Sbjct: 499 CGVAHDPRVTIRYVWEKDGATL-TMESN----PRIRLDKNGSLHITQTWSGDIGTYTCRV 553

Query: 760 KSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIART 817
            S  G  S    + V   P  P      +    + +  + W        P+  Y +    
Sbjct: 554 LSAGGNDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTWAKPFDGNSPLIRYVLEMSE 613

Query: 818 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPS 875
           N N+ W  +   V            EA+   V  LVP  +Y+F++ A N++G G+ S  +
Sbjct: 614 N-NAPWTTLLASV----------DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDT 662

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTE 932
            + + P + P   P  +   G     + I W+P P   QN     Y I +         +
Sbjct: 663 ERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQ 722

Query: 933 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           F++ T  +  N+ +  + I     +T YE++V A N  G G
Sbjct: 723 FKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLG 758



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G  SSP   +   A  P  AP  +   G     L ++WEP P + QN
Sbjct: 1577 YEIRMSVYNAVGEGPLSSPQEVFVGEA-VPTAAPRNVAVHGATATQLDVTWEPPPLDSQN 1635

Query: 916  APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW  ++KN TE  ++  L E G      V++ +   YT Y V V A N  G
Sbjct: 1636 GDIQGYKIYFWEAQRKNLTERVKTLFLAENG------VKLKNLTGYTAYMVSVAAFNAAG 1689

Query: 972  PGPES 976
             GP S
Sbjct: 1690 DGPRS 1694



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R      W     +VS +   
Sbjct: 1384 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASS 1442

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1443 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEDSESLTTLQAAPDEAPTVL 1490

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL++  N G     + 
Sbjct: 1491 SVTPHTTTSVLIRWQPPAEDKVNGILLGFRIRYRELLYEGLRGFTLRDINNPGAKWAELT 1550

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1551 SLYSMRNLSRPSLTQYELENLNKHRRYEIRMSVYNAVGEGPLS 1593



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1814 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1870

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1871 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1904



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 39/262 (14%)

Query: 733  PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 785
            PN+ ++    GL  +T  +     E   +     G++S  T  I  G PP LPG    + 
Sbjct: 929  PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 982

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 842
            +  +   S T+Q+  G      I+ + + A+         W  +  H +  E D     +
Sbjct: 983  ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLL--HQLSNEPDA----R 1036

Query: 843  EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
               + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L
Sbjct: 1037 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1095

Query: 903  SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 956
             + W PLP  + N    ++ YKI   K + ++   +TL       +   R+  E+     
Sbjct: 1096 WLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVPDRVEREYTIEDL 1147

Query: 957  --YTEYEVKVQAINDVGPGPES 976
              +TEY V+VQA N +G GP S
Sbjct: 1148 EEWTEYRVQVQAFNAIGSGPWS 1169



 Score = 46.2 bits (108), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1074 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1131

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P SP+    T    P  
Sbjct: 1132 -HVVPDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSPAVLGRTRESVPSS 1183

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1184 GPTNVSALATTSSSMLVRWNEIPEADRNGLILGYKVRYKEK-DSDSQPRFWLVEGNASRS 1242

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              +I     Y  YEV+V A   +G    S+
Sbjct: 1243 -AQITGLGKYVLYEVQVLAFTRIGAASPSQ 1271



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A+    I  Y+I  R N  +T    +  V+     +
Sbjct: 1283 PGPPMGILFPEVRTTSVRLIWQPPASPNGIILAYQITHRLN-ATTANTAAVEVLAPSARQ 1341

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            +T          L P S Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1342 FTASG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1393

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY I  R+     +   +     N     V     F
Sbjct: 1394 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASSFTVDRLKPF 1451

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1452 --TSYKFRVKATNDIG 1465


>gi|334348529|ref|XP_003342072.1| PREDICTED: neuronal cell adhesion molecule [Monodelphis domestica]
          Length = 1186

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 218/859 (25%), Positives = 348/859 (40%), Gaps = 107/859 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+                +  +D+  P  I R     + P D + D  +     +I
Sbjct: 20  ILFLCQVM-----------SALEVPLDLVQPPTITR-----QSPKDYIIDPRE-----NI 58

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV  L +           G L+I+   + + 
Sbjct: 59  EIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPN----------SGTLVISITIEGKA 108

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++  +I     G+++          
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILK-GQSLVLPCRPPLGL 167

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 168 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 226

Query: 383 FFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK-------VRLECVAFGYPVPSYNWTR 435
             P+ V  HS    ++ P   PK      +   K       + LEC+A G P PS NWT+
Sbjct: 227 --PISVKVHSTKSYIERP---PKLLTPEGRTSHKEELRENVLSLECIAEGLPTPSINWTK 281

Query: 436 RGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIP 494
               LP N  +++NF + L I +V   D G+Y C A N    +E +++++++A P +   
Sbjct: 282 EDGELPINRTFYKNFKKTLNIIHVSEADSGKYKCTARNSLGFVEHTISVTVKAAPYWITA 341

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554
             +  +    D T  C A G P    SW  NG  +  E  P +D  R    D +L     
Sbjct: 342 PRNLVLSPGEDGTLICRANGNPKPNISWLINGVPI--EMAP-DDPSRKIDGDTILFSDVQ 398

Query: 555 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 614
             E   A+YQC A N+     ++A + VL   P      ++            + C    
Sbjct: 399 --ESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTE-VDLRYQVITDRPAMLDCAFFG 455

Query: 615 APKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
           +P P   W K   G+++         +NG L I    +D +  Y+C   N  GM ++   
Sbjct: 456 SPIPTIEWFKGTKGSVLQEN-TYVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVH 514

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 732
           L V       +Q   KI     R +   C+   +  L     W          D  EL  
Sbjct: 515 LEVKDPTRIIKQPEYKIVQRGGR-VSFECTVKHDPTLIATLTWLK--------DYGEL-- 563

Query: 733 PN---INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PG 779
           PN    +ID   L I N S  D   Y CV  +++  +S    + V G           P 
Sbjct: 564 PNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPN 623

Query: 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 837
            P  +++    + S  + W  G  N  PIT + I     ++    W + ++ V G +   
Sbjct: 624 PPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTD-VPGIQ--- 679

Query: 838 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                  + E  L P+  Y F+VIA N +G   PS  S  Y T A +P + P+ + G G 
Sbjct: 680 ------TTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGS 733

Query: 898 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 956
           +  +L I+W+PL     N P + YK+ WR+K+ D E+ S  +    NV   +V     F 
Sbjct: 734 EPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF- 789

Query: 957 YTEYEVKVQAINDVGPGPE 975
              Y VKVQA+N+VG  PE
Sbjct: 790 -VPYLVKVQALNNVGFAPE 807


>gi|222352127|ref|NP_001138424.1| protein sidekick-2 precursor [Homo sapiens]
 gi|296452966|sp|Q58EX2.3|SDK2_HUMAN RecName: Full=Protein sidekick-2; Flags: Precursor
          Length = 2172

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 197/810 (24%), Positives = 330/810 (40%), Gaps = 85/810 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 26  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 68

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 69  KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 124

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y 
Sbjct: 125 SHGEAAVIRAPRIASFPQPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY- 181

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-------PEAPKAGDKVRLE 420
             VQ+     G N    P+ +      + +  P +                    +V LE
Sbjct: 182 -YVQAVNDKNGDNKTSQPITL----TVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLE 236

Query: 421 CVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           CVA   P+   +  W + G  L  +    + NR LTIPN    D G Y C A    S++ 
Sbjct: 237 CVANARPLIKLHIIWKKDGVLL--SGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVP 294

Query: 479 SSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSET 533
           S V    +S+   P F +   ++H+  + +  +   C+A GVP  + +W+++  ++  E 
Sbjct: 295 SVVRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCQAKGVPPPSITWYKDAAVVEVEK 353

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L    Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + P
Sbjct: 354 LTRFRQR----NDGGLQISGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGP 408

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVS 649
           L+S     +G +V + C    AP+P   W+K   I+ SG     R    E+G+LLISP  
Sbjct: 409 LDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTH 466

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  +
Sbjct: 467 ISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRV 525

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 768
            + YIW  +G  +G         P I +D  G L I+     D G Y C V S  G  S 
Sbjct: 526 TIRYIWEKDGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSR 580

Query: 769 KTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
              + V   P  P      +  V + +  + WT       P+  Y I+  +  N+ W   
Sbjct: 581 SAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW--- 636

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
              V+   VD    +  +     LVP  +Y+F++ A N++G G+ S  + + + P + P 
Sbjct: 637 --TVLLASVD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPT 691

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGN 943
             P  +   G     + I W+P P   QN     Y I +         +F++ T  +  N
Sbjct: 692 APPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNN 751

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           + +  + I     +T YE++V A N  G G
Sbjct: 752 LLLEDLII-----WTNYEIEVAAYNSAGLG 776



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 33/260 (12%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 947  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+         W  +  H +  E D     +   
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1058 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116

Query: 906  WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 957
            W PLP  + N    ++ YKI   K + ++   +TL       +   R+  ++       +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1168

Query: 958  TEYEVKVQAINDVGPGPESE 977
            TEY V+VQA N +G GP S+
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQ 1188



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  ++ N TE + +TL    N     V++ +   YT Y V V A N  G 
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708

Query: 973  GPES 976
            GP S
Sbjct: 1709 GPRS 1712



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R   +  W     +VS +   
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +      E V+     +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q PSR  +   
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1411

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              +   + +SWE  P     +P  YY I  R+     +   +     N    +V     F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1469

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483



 Score = 43.1 bits (100), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     + +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1150 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289


>gi|90183174|sp|Q8AV57.2|SDK2_CHICK RecName: Full=Protein sidekick-2; Flags: Precursor
          Length = 2177

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 195/833 (23%), Positives = 328/833 (39%), Gaps = 102/833 (12%)

Query: 177 GMDIENPDKIPR---GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           G+    P  +P     PYF  +P      L      N + L+C A G     ++W     
Sbjct: 15  GLSALLPPSLPADDVSPYFKTEPVRSQVHLEG----NRLVLTCMAEGSWPLEFKWLHNSR 70

Query: 234 VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                           +F+L    +I +  R     G Y C   N+ G+++    ++   
Sbjct: 71  -------------ELTKFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVA 115

Query: 294 FIGEFNLKRAPEIGNQNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
           ++G F      +  + + G+A     P   ++P     W RD     +    R+ ++ + 
Sbjct: 116 YMGSFEDSETQQ--SVSHGEAAVIRAPRIASFPQPQVTWFRDG--RKISPSSRIAITLEN 171

Query: 352 ALYFSALEQIDAGNYSCN-VQSKVSDT--------------GRNGPFFPLKVFPHSNFQQ 396
            L   +    DAG Y    V  K  D               G   P  P  + P  N   
Sbjct: 172 TLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVANVGGPADPIAPTIIVPPRNTSV 231

Query: 397 LKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILT 454
           +                  +V +ECVA   P+   +  W + G P+  ++   +++R LT
Sbjct: 232 VA--------------GTSEVTMECVANARPLIKLHIIWKKDGVPI--SSGISDYSRRLT 275

Query: 455 IPNVKVEDQGEYICRA---SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQAD--LTWT 509
           I N  + D G Y C A   S+   A+     +S+   P F +   ++H+  + +  +   
Sbjct: 276 ILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLEPPQF-VKEPERHITAEMEKVVAIP 334

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 568
           C+A GVP    +W+++  L++ E L      R+  + D  L I  L P+ D  M+QC A+
Sbjct: 335 CQAKGVPPPDMAWYKDASLIHPEQL-----SRFQLLADGSLQISGLLPD-DTGMFQCFAR 388

Query: 569 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
           N      ++  L V ++ P+  + P +S     +G +V + C    AP+P   W+K   I
Sbjct: 389 NAAGEVQTTTYLAVTSIAPNITRGPQDSTVI--DGMSVILNCETSGAPRPAITWQKGERI 446

Query: 629 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
           + SG     R  + E+G+LL+SP    D+G Y+C ATN  G+DE+   L+V    +    
Sbjct: 447 LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVVW-ARTRITD 505

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 743
            P   ++       + C    +  +DV YIW  +G  +G         P + +D  G L 
Sbjct: 506 PPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEKDGAPLGTES-----GPRLRLDETGTLH 560

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 801
           I+     D G Y C V S  G  S    + V   P  P     V   + K +  + W   
Sbjct: 561 ISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQLPHAPESPVAVLSPLEKRAINLTWAKP 620

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
                P+  Y +    N N+ W  V    +  E+     R        LVP  +Y+F++ 
Sbjct: 621 FDGNSPLLRYLVEISEN-NAPW-TVLLASVDPELTWVVVRG-------LVPARSYQFRLC 671

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N++G  + S  + + + P + P+  P  +   G     + I W+P P   QN     Y
Sbjct: 672 AVNDVGRSQFSKDTERVSLPEEPPFAPPQNVIASGRTNQSIMIQWQPPPESHQNGVLKGY 731

Query: 922 KI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            I +        +Q    K   N  +  + +     +T YE++V A N  G G
Sbjct: 732 IIRYCLAGLPVGYQ---FKNITNADVNNLLLEDLIIWTNYEIEVAAYNSAGLG 781



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 787  VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            +  + ++ TI WT G     PIT Y I AR +    W ++    I KEV  YT   +   
Sbjct: 1838 ISRYGSAITIHWTSGDPGQGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMDILK 1896

Query: 847  ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + V     +Y+F+VIA N+ GYG PS+PSP  +     P+
Sbjct: 1897 QGV-----SYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1931



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 54/125 (43%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PS P   +   A  P  AP  +         L ++WEP P E QN
Sbjct: 1600 YEIRMSVYNAVGEGPPSPPQEVFVGEA-MPTGAPQNVAVKAATATQLDVTWEPPPTESQN 1658

Query: 916  APNIYYKI-FW---RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW   R+      ++  L E G      V++ +   YT Y V + A N  G
Sbjct: 1659 GDIQGYKIHFWEAQRQNESARVKTLFLPETG------VKLKNLTGYTSYWVSIAAFNAAG 1712

Query: 972  PGPES 976
             GP S
Sbjct: 1713 DGPRS 1717



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 37/263 (14%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 788
            PN+ ++     +T  +       E    ++ G+    ++ I  G PP LPG    + +  
Sbjct: 952  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSSSTISSGVPPELPGAPTNLGISN 1008

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNWNST---WFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ +++ A+   N     W  V  H +  E D     +   
Sbjct: 1009 IGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLV--HQLANEPDA----RSLE 1062

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + N L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1063 VPN-LNPYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRTASETSLWLR 1121

Query: 906  WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV--RIPSEFY----- 956
            W PL  ++ N    ++ Y+I + + +            G   + V+  R+  E+      
Sbjct: 1122 WMPLLEQEYNGNPDSVGYRIRYLRSDGQ----------GRAVVHVIHDRVEREYTIEDLE 1171

Query: 957  -YTEYEVKVQAINDVGPGPESEV 978
             +TEY V+VQA N +G GP S +
Sbjct: 1172 EWTEYRVQVQAFNAIGSGPWSHL 1194



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W         I  Y++  R N  +    VSE V+G    +
Sbjct: 1306 PGPPVGMLFPEVRTTSVRLIWQPPTAPNGIILAYQLTHRLNTTTANAAVSE-VLGPSTRQ 1364

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P +TY F + A    G+GE +          D+P Q PS+  +   
Sbjct: 1365 YTATG-------LQPEATYLFSITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPLVRQE 1416

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              +   + +SWEP       +P  +Y +  R+    E+         N    VV     F
Sbjct: 1417 DVRARSVLLSWEP--GSDGLSPVRFYTVQTRELPSGEWALHPASISHNATAFVVDRLKPF 1474

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1475 --TSYKFRVKATNDIG 1488



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  V+  +V   S  + W  G+    P+  Y +  R   +  W     ++S +   
Sbjct: 1407 PPSKPL-VRQEDVRARSVLLSWEPGSDGLSPVRFYTVQTRELPSGEWALHPASISHNATA 1465

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1466 FVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESESLTTLQAAPEEAPTIL 1513

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG------- 945
                     + I W+P   +K N   + +++ +R+      +  TL   GN G       
Sbjct: 1514 SVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYRELLYDSLRGFTLHGIGNPGATWAELT 1573

Query: 946  -IAVVRIPSEFYYTE-----------YEVKVQAINDVGPGPES 976
             +  V   SE   T+           YE+++   N VG GP S
Sbjct: 1574 PVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVYNAVGEGPPS 1616



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 24/253 (9%)

Query: 726  DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGV 784
            D   LE PN+N        T  SF        +V ++   + ++    ++ PP + P  V
Sbjct: 1057 DARSLEVPNLN------PYTYYSFR--MRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANV 1108

Query: 785  QVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
             +    +TS  ++W    +   NG P +  Y+I  R   +        HVI   V+R   
Sbjct: 1109 TLRTASETSLWLRWMPLLEQEYNGNPDSVGYRI--RYLRSDGQGRAVVHVIHDRVER--- 1163

Query: 841  RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
              E +IE+ L  W+ Y  +V A N +G G P S      T    P   PS +        
Sbjct: 1164 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHLVLGRTRESVPSSGPSNVSAQATSSS 1219

Query: 901  DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
            ++ + W  +P    N   + YK+ +++K D+E +++     GN   +  ++     +  Y
Sbjct: 1220 NMLVRWSDIPEADCNGLILGYKVMFKEK-DSEARAQFWLAEGNTSRS-AQLTGLGKFMLY 1277

Query: 961  EVKVQAINDVGPG 973
            E++V A   +G G
Sbjct: 1278 EIRVLAFTRIGDG 1290


>gi|224070363|ref|XP_002190771.1| PREDICTED: protein sidekick-1 [Taeniopygia guttata]
          Length = 2194

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 192/783 (24%), Positives = 310/783 (39%), Gaps = 67/783 (8%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
           N + L+C A G     ++W   D       + +    S+ ++ +           Q  D 
Sbjct: 95  NRLVLTCLAEGSWPLEFKWLHND-------SEITSYSSEYKYIIPA--------LQRADA 139

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP--TNYPGVN 327
           G Y C   N+ G+++    Q+   ++G+F      +   +  G+A   + P   ++P   
Sbjct: 140 GFYQCVVRNRMGALLQRRSQVQVAYMGDFMGTDQRKTVTE--GQAAVLNFPHILSHPRPQ 197

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
             W RD   + +    R+ ++ +  L    + + DAG Y     ++ +   +  PF  L 
Sbjct: 198 VTWFRDG--HKIIPSSRIAITLENQLVILGVSETDAGGYYVQAVNEKNGENKTSPFIHLS 255

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYPVP--SYNWTRRGSPLPRNA 444
           V   S+      P    +    +  AG  +  LECVA   P+   S  W R G  +   +
Sbjct: 256 VARASSPPASAAPAMVIRPHNTSVVAGSSEATLECVANARPLERLSVTWKRNGIKI--TS 313

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVTISIQAEPNFTI-PLTDKHM 500
              +F R LTI N    D G Y C A    S  E   +   +SI   P FT  P      
Sbjct: 314 GISSFGRRLTITNPTSADVGMYFCEAKLRESTEEPARAKAFLSILEPPYFTAEPQNVILA 373

Query: 501 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
           + + D+   C+A GVP  T  W+++   L+     LE+     +    L I  L P+ D 
Sbjct: 374 EVEKDVDILCQAMGVPIPTLVWYKDSVPLSR----LENPRYKVLLSGGLRIHALRPQ-DA 428

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 620
            ++QC A NQ    ++   L V  +KP+F + P   +T   EG    + C    AP+P  
Sbjct: 429 GIFQCFASNQAGEIHTYTYLDVTNIKPAFIQPP--EDTTVTEGMTAVLTCEVSGAPRPAI 486

Query: 621 VWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676
            WKK   I+ SG     R  + E+G L I+PV   D+G Y+C A N  G   +   L V 
Sbjct: 487 SWKKGEQILASGSVQIPRFVLLESGGLQIAPVFLQDAGNYTCCAANSEGALNAFVMLTVW 546

Query: 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
           +  S     P   T+       LRC A  +  + + Y+W  +   I     + +    + 
Sbjct: 547 NRTSIVHP-PEDSTVIKGTTATLRCEATHDPRISIRYLWKKDSAVINPSSSSRI---TVE 602

Query: 737 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSA 794
            DG LL I+     D G+Y C V S+ G  S    + V   P  P  +       +  S 
Sbjct: 603 KDGTLL-ISQTWSGDIGDYTCEVVSSGGNDSRTARLEVIELPHSPQNLVATLNSSYSRSV 661

Query: 795 TIQWTDGATNGRPITHYKIIARTN---WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 851
            + W        P+ +Y +    N   W     N+   + G  V              L 
Sbjct: 662 VLSWVRPFDGNSPVLYYVVELSENNSPWKVHLSNLDPKMTGVTVSG------------LT 709

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P  TY+F+V A N++G G  S+ + +   P + P   P  I   G     + + W+P P 
Sbjct: 710 PARTYQFRVCAVNQVGKGRYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPE 769

Query: 912 EKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            + N     Y + +R      E+Q    K   +  I    +     +T+YE++V + N  
Sbjct: 770 SEHNGVLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLVKDLIIWTQYEIQVASYNGA 826

Query: 971 GPG 973
           G G
Sbjct: 827 GLG 829



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 8/117 (6%)

Query: 773  IVEGPP-GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
            I  GP  G PG  Q + V K+++  T+QWT+G +  +P T Y I AR +    W      
Sbjct: 1869 ITAGPAEGSPGSPQEILVTKSASGLTLQWTEGDSGEKPTTGYIIEARPSDEGLW-----D 1923

Query: 830  VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            +  K++ R          + L    TYEF+V+A NE GYGEPS PS   +   + P+
Sbjct: 1924 MFVKDIPRSATSYTVVGLDKLRQGVTYEFRVVAVNEFGYGEPSVPSVAVSAQTEAPF 1980



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 22/246 (8%)

Query: 738  DGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVI--VEGPPGL-PGGVQVVEVHKT 792
            D  +LE+ N +      +     + VG   +S  + VI  ++ PP + PG V V    +T
Sbjct: 1104 DAQMLEVPNLTPYTHYRFRMRQVNVVGPSPLSQPSRVIQTLQAPPDVAPGSVTVRTASET 1163

Query: 793  SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 848
            S  ++W    D   NG P +  Y+I A   W +     +  ++    DR    +E ++E 
Sbjct: 1164 SLWLRWVPLPDTQYNGNPESVGYRIRA---WRADL--PAPALLKVLADRLA--RECTLEE 1216

Query: 849  VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 908
             L  W+ YE ++ A N +G G P S + +  T    P   P  +         + ++W  
Sbjct: 1217 -LQEWTEYELQIQAFNAIGAG-PWSEAVRGRTRESVPSAPPENVSAEAVSSTQILLTWAA 1274

Query: 909  LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
            +P  +QN   + YKI ++ K+ D+E +S+T++  GN   +V+ +     +  YE++V A 
Sbjct: 1275 VPESEQNGLILGYKILYKAKDLDSEPKSQTVR--GNHTQSVL-LSGLRKFVLYELQVLAF 1331

Query: 968  NDVGPG 973
              +G G
Sbjct: 1332 TRIGDG 1337



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 13/216 (6%)

Query: 768  TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +        
Sbjct: 1032 TSSTISSGVPPELPGAPTNLVISNISPRSATLQFRPGYDGKTSISKWIVEGQVG---VLG 1088

Query: 825  NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
            +  E V   EV+     +   + N L P++ Y F++   N +G    S PS    T    
Sbjct: 1089 DEEEWVTLHEVENEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGPSPLSQPSRVIQTLQAP 1147

Query: 885  PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEY 941
            P  AP  +         L + W PLP  + N    ++ Y+I  WR         + L + 
Sbjct: 1148 PDVAPGSVTVRTASETSLWLRWVPLPDTQYNGNPESVGYRIRAWRADLPAPALLKVLADR 1207

Query: 942  GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
                  +  +     +TEYE+++QA N +G GP SE
Sbjct: 1208 LARECTLEELQE---WTEYELQIQAFNAIGAGPWSE 1240



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 41/209 (19%), Positives = 81/209 (38%), Gaps = 28/209 (13%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            +V   S  + W  G+    PI ++ +  R   +  W   S  +        +    + I 
Sbjct: 1464 DVSSRSLVLTWLPGSDGSSPIRYFTVQVRELPHGDWQTYSSSI--------SHEATSCII 1515

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
              L P+++Y+ +V A N++G  + S+ +    T  D P + PS +         + + W+
Sbjct: 1516 ESLNPFTSYKLRVKATNDIGDSDFSAETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQ 1575

Query: 908  PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEY------GNVGIA 947
            P   E  N   + Y+I++R+              +N +  ++E   +        +  + 
Sbjct: 1576 PPKAESVNGLLLGYRIYYRELDYDTGPGTESKTIQNPSALRAELTPQSSFKTVNSSSALT 1635

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPES 976
               +     Y  YEV + A N +G  P S
Sbjct: 1636 TYELTQLKKYKRYEVLMTAYNVIGESPTS 1664



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 13/126 (10%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  I         L ++W+P P + QN
Sbjct: 1648 YEVLMTAYNVIGESPTSTPVEVFVGEA-APALAPQNIQVNSLSASQLELTWDPPPADSQN 1706

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGI-----AVVRIPSEFYYTEYEVKVQAINDV 970
                 YKI++       ++S+TL +   V +       VR+ +   +T Y V + A N  
Sbjct: 1707 GIIQGYKIYY-------WESDTLNDTEKVKVLFLPETSVRLKNLTSHTRYLVCISAFNAA 1759

Query: 971  GPGPES 976
            G GP S
Sbjct: 1760 GDGPRS 1765


>gi|345320160|ref|XP_001521777.2| PREDICTED: contactin-1-like, partial [Ornithorhynchus anatinus]
          Length = 354

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 170/352 (48%), Gaps = 20/352 (5%)

Query: 326 VNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
           ++Y W  + FP F+  DKR FVS  +G LY + +E  D GNYSC V S          F 
Sbjct: 20  LSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDRGNYSCFVSSPSITKSVFSKFI 79

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPK-AGDKVRLECVAFGYPVPSYNWTRRGSPLPRN 443
           PL   P S+     +P +    F +     G  V LEC A G PVP   W +   P+P +
Sbjct: 80  PL--IPLSDRTTKGYPADIKVQFKDTSALVGQNVTLECFALGNPVPEIRWRKVLEPMPGS 137

Query: 444 AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQ 503
           A       +L I N+++ED+G Y C A N +   +    I +QA P +   + D   D  
Sbjct: 138 AEISMSGSVLKIFNIQLEDEGTYECEAENSKGKDKHQARIYVQAFPEWVEYINDTERDIG 197

Query: 504 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563
           +DL W C A G P  T  W +NG               +  Q   + I  L  +    MY
Sbjct: 198 SDLYWPCVATGKPIPTIRWLKNG---------------FPYQKGEMRIYGLTFDH-AGMY 241

Query: 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 623
           QC A+N     Y++A+L++L L P+F+  P++ +  A +GG V + C P+AAPK KF W 
Sbjct: 242 QCIAENTHGAIYANAELKILALPPTFELNPMKKKFLAAKGGRVLMECKPKAAPKAKFSWS 301

Query: 624 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675
           K    + +  R  ++E+G+L I  ++R D G Y+C A N  G   S   L +
Sbjct: 302 KGTEWLVNSSRISLWEDGSLEIRNITRMDGGTYTCFAENNRGKANSSATLSI 353



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 138/365 (37%), Gaps = 52/365 (14%)

Query: 430 SYNWTRRGSP----LPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485
           SY W     P    + +  +    N  L I NV+  D+G Y C  S+       S+T S+
Sbjct: 21  SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDRGNYSCFVSS------PSITKSV 74

Query: 486 QAEPNFTIPLTDKHM------------DNQA----DLTWTCEAFGVPDVTYSWFRNGELL 529
            ++    IPL+D+              D  A    ++T  C A G P     W +  E  
Sbjct: 75  FSKFIPLIPLSDRTTKGYPADIKVQFKDTSALVGQNVTLECFALGNPVPEIRWRKVLE-- 132

Query: 530 NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
                P+       +  +VL I  +  E D   Y+C A+N        A++ V    P +
Sbjct: 133 -----PMPGSAEISMSGSVLKIFNIQLE-DEGTYECEAENSKGKDKHQARIYVQAF-PEW 185

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVS 649
            +    ++T    G ++   C     P P   W K+G           ++ G + I  ++
Sbjct: 186 VE--YINDTERDIGSDLYWPCVATGKPIPTIRWLKNGFP---------YQKGEMRIYGLT 234

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
            D +G+Y C A N HG   +   L +L  P  +E  P K    A +  ++      +   
Sbjct: 235 FDHAGMYQCIAENTHGAIYANAELKILALPPTFELNPMKKKFLAAKGGRVLMECKPKAAP 294

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769
              + W+     + N     L       + G LEI N +  D G Y C  ++  GK ++ 
Sbjct: 295 KAKFSWSKGTEWLVNSSRISL------WEDGSLEIRNITRMDGGTYTCFAENNRGKANSS 348

Query: 770 TTVIV 774
            T+ +
Sbjct: 349 ATLSI 353



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 124/304 (40%), Gaps = 57/304 (18%)

Query: 196 PTDVVFDLSKRSIL--NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL-SDKRFT 252
           P D+       S L   ++TL C+A G P P   W K           +++P+      +
Sbjct: 93  PADIKVQFKDTSALVGQNVTLECFALGNPVPEIRWRK-----------VLEPMPGSAEIS 141

Query: 253 LSGGNLIINDPRQVEDRGSYHCKASNKFGSIISES---VQLAFGFIGEFNLKRAPEIGNQ 309
           +SG  L I +  Q+ED G+Y C+A N  G    ++   VQ AF    E+      +IG+ 
Sbjct: 142 MSGSVLKIFNI-QLEDEGTYECEAENSKGKDKHQARIYVQ-AFPEWVEYINDTERDIGSD 199

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF-VSYDGALYFSALEQIDAGNYSC 368
            +   +     T  P     W ++ FP + + + R++ +++D A  +  + +   G    
Sbjct: 200 LYWPCV----ATGKPIPTIRWLKNGFP-YQKGEMRIYGLTFDHAGMYQCIAENTHGAIYA 254

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428
           N + K+           L + P      +K      K F  A   G +V +EC     P 
Sbjct: 255 NAELKI-----------LALPPTFELNPMK------KKFLAA--KGGRVLMECKPKAAPK 295

Query: 429 PSYNWTRRGSPLPRNAYFENFNRI-------LTIPNVKVEDQGEYICRASNDRSALESSV 481
             ++W++         +  N +RI       L I N+   D G Y C A N+R    SS 
Sbjct: 296 AKFSWSK------GTEWLVNSSRISLWEDGSLEIRNITRMDGGTYTCFAENNRGKANSSA 349

Query: 482 TISI 485
           T+SI
Sbjct: 350 TLSI 353


>gi|332848956|ref|XP_511658.3| PREDICTED: protein sidekick-2 [Pan troglodytes]
          Length = 2172

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 197/810 (24%), Positives = 329/810 (40%), Gaps = 85/810 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 26  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 68

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 69  KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 124

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y 
Sbjct: 125 SHGEAAVIRAPRIASFPQPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY- 181

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-------PEAPKAGDKVRLE 420
             VQ+     G N    P+ +      + +  P +                    +V LE
Sbjct: 182 -YVQAVNDKNGDNKTSQPITL----TVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLE 236

Query: 421 CVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           CVA   P+   +  W + G  L  +    + NR LTIPN    D G Y C A    S++ 
Sbjct: 237 CVANARPLIKLHIIWKKDGVLL--SGGISDHNRRLTIPNPTSSDAGYYECEAVLRSSSVP 294

Query: 479 SSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSET 533
           S V    +S+   P F +   ++H+  + +  +   C A GVP  + +W+++  ++  E 
Sbjct: 295 SVVRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAVVEVEK 353

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L    Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + P
Sbjct: 354 LTRFRQR----SDGGLQISGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGP 408

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVS 649
           L+S     +G +V + C    AP+P   W+K   I+ SG     R    E+G+LLISP  
Sbjct: 409 LDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTH 466

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  +
Sbjct: 467 ISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRV 525

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 768
            + YIW  +G  +G         P I +D  G L I+     D G Y C V S  G  S 
Sbjct: 526 TIRYIWEKDGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSR 580

Query: 769 KTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
              + V   P  P      +  V + +  + WT       P+  Y I+  +  N+ W   
Sbjct: 581 SAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW--- 636

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
              V+   VD    +  +     LVP  +Y+F++ A N++G G+ S  + + + P + P 
Sbjct: 637 --TVLLASVD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPT 691

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGN 943
             P  +   G     + I W+P P   QN     Y I +         +F++ T  +  N
Sbjct: 692 APPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNN 751

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           + +  + I     +T YE++V A N  G G
Sbjct: 752 LLLEDLII-----WTNYEIEVAAYNSAGLG 776



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 108/260 (41%), Gaps = 33/260 (12%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 947  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+         W  +  H +  E D     +   
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1058 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116

Query: 906  WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 957
            W PLP  + N    ++ YKI   K + ++   +TL       +   R+  E+       +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEW 1168

Query: 958  TEYEVKVQAINDVGPGPESE 977
            TEY V+VQA N +G GP S+
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQ 1188



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  ++ N TE + +TL    N     V++ +   YT Y V V A N  G 
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708

Query: 973  GPES 976
            GP S
Sbjct: 1709 GPRS 1712



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R   +  W     +VS +   
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611



 Score = 44.3 bits (103), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289



 Score = 43.1 bits (100), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +      E V+     +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q PSR  +   
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1411

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              +   + +SWE  P     +P  YY I  R+     +   +     N    +V     F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1469

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483


>gi|45383103|ref|NP_989869.1| protein sidekick-2 [Gallus gallus]
 gi|23194256|gb|AAN15076.1| sidekick-2 [Gallus gallus]
          Length = 2217

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 195/833 (23%), Positives = 328/833 (39%), Gaps = 102/833 (12%)

Query: 177 GMDIENPDKIPR---GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY 233
           G+    P  +P     PYF  +P      L      N + L+C A G     ++W     
Sbjct: 55  GLSALLPPSLPADDVSPYFKTEPVRSQVHLEG----NRLVLTCMAEGSWPLEFKWLHNSR 110

Query: 234 VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFG 293
                           +F+L    +I +  R     G Y C   N+ G+++    ++   
Sbjct: 111 -------------ELTKFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVA 155

Query: 294 FIGEFNLKRAPEIGNQNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
           ++G F      +  + + G+A     P   ++P     W RD     +    R+ ++ + 
Sbjct: 156 YMGSFEDSETQQ--SVSHGEAAVIRAPRIASFPQPQVTWFRDG--RKISPSSRIAITLEN 211

Query: 352 ALYFSALEQIDAGNYSCN-VQSKVSDT--------------GRNGPFFPLKVFPHSNFQQ 396
            L   +    DAG Y    V  K  D               G   P  P  + P  N   
Sbjct: 212 TLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVANVGGPADPIAPTIIVPPRNTSV 271

Query: 397 LKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILT 454
           +                  +V +ECVA   P+   +  W + G P+  ++   +++R LT
Sbjct: 272 VA--------------GTSEVTMECVANARPLIKLHIIWKKDGVPI--SSGISDYSRRLT 315

Query: 455 IPNVKVEDQGEYICRA---SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQAD--LTWT 509
           I N  + D G Y C A   S+   A+     +S+   P F +   ++H+  + +  +   
Sbjct: 316 ILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLEPPQF-VKEPERHITAEMEKVVAIP 374

Query: 510 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 568
           C+A GVP    +W+++  L++ E L      R+  + D  L I  L P+ D  M+QC A+
Sbjct: 375 CQAKGVPPPDMAWYKDASLIHPEQL-----SRFQLLADGSLQISGLLPD-DTGMFQCFAR 428

Query: 569 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 628
           N      ++  L V ++ P+  + P +S     +G +V + C    AP+P   W+K   I
Sbjct: 429 NAAGEVQTTTYLAVTSIAPNITRGPQDSTVI--DGMSVILNCETSGAPRPAITWQKGERI 486

Query: 629 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
           + SG     R  + E+G+LL+SP    D+G Y+C ATN  G+DE+   L+V    +    
Sbjct: 487 LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVVW-ARTRITD 545

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 743
            P   ++       + C    +  +DV YIW  +G  +G         P + +D  G L 
Sbjct: 546 PPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEKDGAPLGTES-----GPRLRLDETGTLH 600

Query: 744 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 801
           I+     D G Y C V S  G  S    + V   P  P     V   + K +  + W   
Sbjct: 601 ISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQLPHAPESPVAVLSPLEKRAINLTWAKP 660

Query: 802 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 861
                P+  Y +    N N+ W  V    +  E+     R        LVP  +Y+F++ 
Sbjct: 661 FDGNSPLLRYLVEISEN-NAPW-TVLLASVDPELTWVVVRG-------LVPARSYQFRLC 711

Query: 862 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 921
           A N++G  + S  + + + P + P+  P  +   G     + I W+P P   QN     Y
Sbjct: 712 AVNDVGRSQFSKDTERVSLPEEPPFAPPQNVIASGRTNQSIMIQWQPPPESHQNGVLKGY 771

Query: 922 KI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            I +        +Q    K   N  +  + +     +T YE++V A N  G G
Sbjct: 772 IIRYCLAGLPVGYQ---FKNITNADVNNLLLEDLIIWTNYEIEVAAYNSAGLG 821



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 787  VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            +  + ++ TI WT G     PIT Y I AR +    W ++    I KEV  YT   +   
Sbjct: 1878 ISRYGSAITIHWTSGDPGQGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMDILK 1936

Query: 847  ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + V     +Y+F+VIA N+ GYG PS+PSP  +     P+
Sbjct: 1937 QGV-----SYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1971



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 54/125 (43%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PS P   +   A  P  AP  +         L ++WEP P E QN
Sbjct: 1640 YEIRMSVYNAVGEGPPSPPQEVFVGEA-MPTGAPQNVAVKAATATQLDVTWEPPPTESQN 1698

Query: 916  APNIYYKI-FW---RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW   R+      ++  L E G      V++ +   YT Y V + A N  G
Sbjct: 1699 GDIQGYKIHFWEAQRQNESARVKTLFLPETG------VKLKNLTGYTSYWVSIAAFNAAG 1752

Query: 972  PGPES 976
             GP S
Sbjct: 1753 DGPRS 1757



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 37/263 (14%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 788
            PN+ ++     +T  +       E    ++ G+    ++ I  G PP LPG    + +  
Sbjct: 992  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSSSTISSGVPPELPGAPTNLGISN 1048

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNWNST---WFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ +++ A+   N     W  V  H +  E D     +   
Sbjct: 1049 IGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLV--HQLANEPDA----RSLE 1102

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + N L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1103 VPN-LNPYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRTASETSLWLR 1161

Query: 906  WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV--RIPSEFY----- 956
            W PL  ++ N    ++ Y+I + + +            G   + V+  R+  E+      
Sbjct: 1162 WMPLLEQEYNGNPDSVGYRIRYLRSDGQ----------GRAVVHVIHDRVEREYTIEDLE 1211

Query: 957  -YTEYEVKVQAINDVGPGPESEV 978
             +TEY V+VQA N +G GP S +
Sbjct: 1212 EWTEYRVQVQAFNAIGSGPWSHL 1234



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W         I  Y++  R N  +    VSE V+G    +
Sbjct: 1346 PGPPVGMLFPEVRTTSVRLIWQPPTAPNGIILAYQLTHRLNTTTANAAVSE-VLGPSTRQ 1404

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P +TY F + A    G+GE +          D+P Q PS+  +   
Sbjct: 1405 YTATG-------LQPEATYLFSITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPLVRQE 1456

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              +   + +SWEP       +P  +Y +  R+    E+         N    VV     F
Sbjct: 1457 DVRARSVLLSWEP--GSDGLSPVRFYTVQTRELPSGEWALHPASISHNATAFVVDRLKPF 1514

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1515 --TSYKFRVKATNDIG 1528



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  V+  +V   S  + W  G+    P+  Y +  R   +  W     ++S +   
Sbjct: 1447 PPSKPL-VRQEDVRARSVLLSWEPGSDGLSPVRFYTVQTRELPSGEWALHPASISHNATA 1505

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1506 FVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESESLTTLQAAPEEAPTIL 1553

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG------- 945
                     + I W+P   +K N   + +++ +R+      +  TL   GN G       
Sbjct: 1554 SVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYRELLYDSLRGFTLHGIGNPGATWAELT 1613

Query: 946  -IAVVRIPSEFYYTE-----------YEVKVQAINDVGPGPES 976
             +  V   SE   T+           YE+++   N VG GP S
Sbjct: 1614 PVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVYNAVGEGPPS 1656



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 24/253 (9%)

Query: 726  DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGV 784
            D   LE PN+N        T  SF        +V ++   + ++    ++ PP + P  V
Sbjct: 1097 DARSLEVPNLN------PYTYYSFR--MRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANV 1148

Query: 785  QVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 840
             +    +TS  ++W    +   NG P +  Y+I  R   +        HVI   V+R   
Sbjct: 1149 TLRTASETSLWLRWMPLLEQEYNGNPDSVGYRI--RYLRSDGQGRAVVHVIHDRVER--- 1203

Query: 841  RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
              E +IE+ L  W+ Y  +V A N +G G P S      T    P   PS +        
Sbjct: 1204 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHLVLGRTRESVPSSGPSNVSAQATSSS 1259

Query: 901  DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
            ++ + W  +P    N   + YK+ +++K D+E +++     GN   +  ++     +  Y
Sbjct: 1260 NMLVRWSDIPEADCNGLILGYKVMFKEK-DSEARAQFWLAEGNTSRS-AQLTGLGKFMLY 1317

Query: 961  EVKVQAINDVGPG 973
            E++V A   +G G
Sbjct: 1318 EIRVLAFTRIGDG 1330


>gi|397484478|ref|XP_003813403.1| PREDICTED: protein sidekick-2 [Pan paniscus]
          Length = 2172

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 197/810 (24%), Positives = 329/810 (40%), Gaps = 85/810 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 26  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 68

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 69  KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 124

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y 
Sbjct: 125 SHGEAAVIRAPRIASFPQPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY- 181

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-------PEAPKAGDKVRLE 420
             VQ+     G N    P+ +      + +  P +                    +V LE
Sbjct: 182 -YVQAVNDKNGDNKTSQPITL----TVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLE 236

Query: 421 CVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           CVA   P+   +  W + G  L  +    + NR LTIPN    D G Y C A    S++ 
Sbjct: 237 CVANARPLIKLHIIWKKDGVLL--SGGISDHNRRLTIPNPTSSDAGYYECEAVLRSSSVP 294

Query: 479 SSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSET 533
           S V    +S+   P F +   ++H+  + +  +   C A GVP  + +W+++  ++  E 
Sbjct: 295 SVVRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAVVEVEK 353

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L    Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + P
Sbjct: 354 LTRFRQR----SDGGLQISGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGP 408

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVS 649
           L+S     +G +V + C    AP+P   W+K   I+ SG     R    E+G+LLISP  
Sbjct: 409 LDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTH 466

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  +
Sbjct: 467 ISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRV 525

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 768
            + YIW  +G  +G         P I +D  G L I+     D G Y C V S  G  S 
Sbjct: 526 TIRYIWEKDGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSR 580

Query: 769 KTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
              + V   P  P      +  V + +  + WT       P+  Y I+  +  N+ W   
Sbjct: 581 SAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW--- 636

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
              V+   VD    +  +     LVP  +Y+F++ A N++G G+ S  + + + P + P 
Sbjct: 637 --TVLLASVD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPT 691

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGN 943
             P  +   G     + I W+P P   QN     Y I +         +F++ T  +  N
Sbjct: 692 APPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNN 751

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           + +  + I     +T YE++V A N  G G
Sbjct: 752 LLLEDLII-----WTNYEIEVAAYNSAGLG 776



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 33/260 (12%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 947  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+         W  +  H +  E D     +   
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1058 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116

Query: 906  WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 957
            W PLP  + N    ++ YKI   K + ++ + +TL +     +   R+  E+       +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGRGKTLSQ-----VVQDRVEREYTIEDLEEW 1168

Query: 958  TEYEVKVQAINDVGPGPESE 977
            TEY V+VQA N +G GP S+
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQ 1188



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  ++ N TE + +TL    N     V++ +   YT Y V V A N  G 
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708

Query: 973  GPES 976
            GP S
Sbjct: 1709 GPRS 1712



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R   +  W     +VS +   
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +      E V+     +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q PSR  +   
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1411

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              +   + +SWE  P     +P  YY I  R+     +   +     N    +V     F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1469

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++      +  
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGRGKTLS-- 1149

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
              V+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1150 -QVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289


>gi|326914464|ref|XP_003203545.1| PREDICTED: contactin-5-like, partial [Meleagris gallopavo]
          Length = 779

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 177/670 (26%), Positives = 279/670 (41%), Gaps = 52/670 (7%)

Query: 328 YYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPL 386
           Y W  + FP+FV ED R F+S + G LY S +++ D G+Y C V++ V++     P  PL
Sbjct: 3   YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQKSDVGSYICLVKNTVTNARVLSPPTPL 62

Query: 387 KVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
            +       +   K   +FP T   A   G  V++EC A G PVP+ +W +     P  A
Sbjct: 63  TLRNDGVMGEYEPKIEVHFPYTVTAA--RGTTVKMECFALGNPVPTISWKKVNGHNPSKA 120

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQA 504
                  +L IPNV++ED G Y C+A N R        + +   P +   L D  +D+  
Sbjct: 121 RLRKSQAVLEIPNVQLEDAGMYECKAENSRGRNVFRGQLQVYTYPQWVEKLNDTELDSGE 180

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
            L W C+A G P  TY W +NG        PL  Q R  + ++VL IR +N   D  MYQ
Sbjct: 181 QLRWECKATGKPRPTYRWLKNGA-------PLWPQSRIEMVNSVLMIRTVNIS-DAGMYQ 232

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A+N+  T Y+SA+L++L   P+F    +       +G  V I C P+A+PKP   WKK
Sbjct: 233 CLAENKYGTIYASAELKILASAPTFPLNQMRKTIIITKGQEVVIECKPQASPKPTITWKK 292

Query: 625 DGNIIGSGGRRKI---FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681
               +    R +      + +L+I  +    +G Y C           +  L+V   P  
Sbjct: 293 GDKALRESKRSEACSQASSADLMIRNILLMHAGRYGCRVQTAADTVSDETELLVRGPPG- 351

Query: 682 YEQLPPKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736
               PP + I          L     A     + +  +   +   +G   +  +  P++ 
Sbjct: 352 ----PPGVVIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGWQTVKTV--PDV- 404

Query: 737 IDGGLLEITNASFADAGEYECVVKST----VGKISTKTTVIVEG---PPGLPGGVQVVEV 789
           I G +            EYE  V +T     G  S  + +I      P   P  V     
Sbjct: 405 ISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSGRSG 464

Query: 790 HKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            +    I W   ++   NG     Y +  R N    W    + V   +  ++  R E+  
Sbjct: 465 RRHELVIAWEPVSEEFQNGEGF-GYIVAFRPNGTRGWKE--KMVTSSDASKFIYRDES-- 519

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
              + P + +E KV   N  G G P SP     +   +P  AP  +      + ++ ++W
Sbjct: 520 ---VPPLTPFEVKVGVYNNKGDG-PFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAW 575

Query: 907 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
           + + +E    P  +   +W K  + E  +E +K  GN   + + +      T Y + V+A
Sbjct: 576 KHI-KESLGRPQGFEIGYW-KDMEQEEAAEKVKTAGNE--SSLLLTGLEGNTLYHLTVRA 631

Query: 967 INDVGPGPES 976
            N  G GP S
Sbjct: 632 YNAAGYGPPS 641



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 154/542 (28%), Positives = 239/542 (44%), Gaps = 42/542 (7%)

Query: 453 LTIPNVKVEDQGEYICRASN---DRSALESSVTISI-------QAEPNFTI--PLTDKHM 500
           L I  V+  D G YIC   N   +   L     +++       + EP   +  P T    
Sbjct: 29  LYISKVQKSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYTVTAA 88

Query: 501 DNQADLTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 559
                +   C A G P  T SW + NG            + R      VL I  +  E D
Sbjct: 89  RG-TTVKMECFALGNPVPTISWKKVNGHN--------PSKARLRKSQAVLEIPNVQLE-D 138

Query: 560 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 619
             MY+C+A+N         QL+V T  P + ++  ++E  +GE   +   C     P+P 
Sbjct: 139 AGMYECKAENSRGRNVFRGQLQVYTY-PQWVEKLNDTELDSGE--QLRWECKATGKPRPT 195

Query: 620 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-HG 678
           + W K+G  +    R ++  N  L+I  V+  D+G+Y C A N +G   +   L +L   
Sbjct: 196 YRWLKNGAPLWPQSRIEMV-NSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASA 254

Query: 679 PSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 737
           P++   Q+   I I   + + + C         +   W      +     +E  +   + 
Sbjct: 255 PTFPLNQMRKTIIITKGQEVVIECKPQASPKPTIT--WKKGDKALRESKRSEACSQASSA 312

Query: 738 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797
           D   L I N     AG Y C V++    +S +T ++V GPPG PG V V E+  T+AT+ 
Sbjct: 313 D---LMIRNILLMHAGRYGCRVQTAADTVSDETELLVRGPPGPPGVVIVEEITDTTATLS 369

Query: 798 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTY 856
           W+ GA N  PI+ Y + AR+ ++  W  V      K V D  +G  E+++   L PW  Y
Sbjct: 370 WSPGADNHSPISLYNLQARSPFSLGWQTV------KTVPDVISGDMESAMAVELNPWVEY 423

Query: 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 916
           EF+V+A N++G G+PS+PS    T    P   P+ + G  G+  +L I+WEP+  E QN 
Sbjct: 424 EFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQNG 483

Query: 917 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
               Y + +R  N T    E +    +    + R  S    T +EVKV   N+ G GP S
Sbjct: 484 EGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFS 542

Query: 977 EV 978
            +
Sbjct: 543 PI 544



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 112/310 (36%), Gaps = 43/310 (13%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271
           + + C+A G P P+  W K          N  +P S  R   S   L I +  Q+ED G 
Sbjct: 93  VKMECFALGNPVPTISWKK---------VNGHNP-SKARLRKSQAVLEIPN-VQLEDAGM 141

Query: 272 YHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ------NWGKAMFCD-PPTNYP 324
           Y CKA N  G  +         F G+  +   P+   +      + G+ +  +   T  P
Sbjct: 142 YECKAENSRGRNV---------FRGQLQVYTYPQWVEKLNDTELDSGEQLRWECKATGKP 192

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
              Y W ++  P + +    +    +  L    +   DAG Y C  ++K      +    
Sbjct: 193 RPTYRWLKNGAPLWPQSRIEMV---NSVLMIRTVNISDAGMYQCLAENKYGTIYASAELK 249

Query: 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA 444
            L   P     Q++      K        G +V +EC     P P+  W +    L  + 
Sbjct: 250 ILASAPTFPLNQMRKTIIITK--------GQEVVIECKPQASPKPTITWKKGDKALRESK 301

Query: 445 YFENFNRI----LTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFT-IPLTDKH 499
             E  ++     L I N+ +   G Y CR       +     + ++  P    + + ++ 
Sbjct: 302 RSEACSQASSADLMIRNILLMHAGRYGCRVQTAADTVSDETELLVRGPPGPPGVVIVEEI 361

Query: 500 MDNQADLTWT 509
            D  A L+W+
Sbjct: 362 TDTTATLSWS 371


>gi|380805053|gb|AFE74402.1| protein sidekick-2 precursor, partial [Macaca mulatta]
          Length = 905

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 198/810 (24%), Positives = 330/810 (40%), Gaps = 85/810 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W                     
Sbjct: 24  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNSR-------------ELT 66

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 67  KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 122

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y 
Sbjct: 123 SHGEAAVIHAPRIASFPRPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY- 179

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-------PEAPKAGDKVRLE 420
             VQ+     G N    P+ +      + +  P +                    +V LE
Sbjct: 180 -YVQAVNDKNGDNKTSQPITL----AVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLE 234

Query: 421 CVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           CVA   P+   +  W + G  L  +    + NR LTIPN    D G Y C A    S++ 
Sbjct: 235 CVANARPLIKLHIIWKKDGMLL--SGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVP 292

Query: 479 SSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSET 533
           S V    +S+   P F +   ++H+  + +  +   C A GVP  + +W+++  ++  E 
Sbjct: 293 SVVRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAVVEVEK 351

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L    Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + P
Sbjct: 352 LARFRQR----SDGGLQISGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGP 406

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVS 649
           L+S     +G +V + C    AP+P   W+K   I+ SG     R    E+G+LLISP  
Sbjct: 407 LDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTH 464

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  +
Sbjct: 465 ISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVSHDPRV 523

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 768
            V YIW  +G  +G ++ N    P I +D  G L I+     D G Y C V S  G  S 
Sbjct: 524 TVRYIWEKDGATLG-VESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSR 578

Query: 769 KTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
              + V   P  P      +  V + +  + WT       P+  Y +    N N+ W   
Sbjct: 579 SAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLLRYVLEMSEN-NAPWT-- 635

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
              ++   VD    +  +     LVP  +Y+F++ A N++G G+ S  + + + P + P 
Sbjct: 636 ---ILLASVD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPT 689

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGN 943
             P  +   G     + I W+P P   QN     Y I +         +F++ T  +  N
Sbjct: 690 APPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNN 749

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           + +  + I     +T YE++V A N  G G
Sbjct: 750 LLLEDLII-----WTNYEIEVAAYNSAGLG 774


>gi|338711348|ref|XP_001916955.2| PREDICTED: protein sidekick-2 [Equus caballus]
          Length = 2162

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 202/811 (24%), Positives = 334/811 (41%), Gaps = 85/811 (10%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W             L +    
Sbjct: 15  APYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKW-------------LHNSREL 57

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  +
Sbjct: 58  TKFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQS 113

Query: 309 QNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNY 366
            + G+A     P   ++P     W R+     +    R+ ++ +  L   +    DAG Y
Sbjct: 114 VSHGEAAVIRAPRIASFPRPQVTWFREG--RKIPPSSRIAITLENTLVILSTVAPDAGRY 171

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK------AG-DKVRL 419
              VQ+     G N    P+ +      + +  P +        P       AG  +V L
Sbjct: 172 --YVQAVNDKNGDNKTSQPITL----AVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTL 225

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           ECVA   P+   +   R   L  +    ++NR LTIPN    D G Y C A    S++ S
Sbjct: 226 ECVANARPLIRLHIIWRKDGLLLSGGISDYNRRLTIPNPTGSDSGYYECEAVLRSSSVPS 285

Query: 480 SVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSETL 534
            +    +S+   P F +   ++H+  + +  +   C A GVP  + +W+++   +  E L
Sbjct: 286 VIRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAAVEVERL 344

Query: 535 PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
               Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + PL
Sbjct: 345 SRFRQR----ADGGLQISALVPD-DTGMFQCFARNAAGEAQTSTYLAVTSIAPNITRGPL 399

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSR 650
           +S     +G +V + C    AP+P   W+K   I+ SG     R  + E+G+LLISP   
Sbjct: 400 DSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHI 457

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D+G Y+C ATN  G+DE+   LIV    +   + P   ++       + C    +  + 
Sbjct: 458 SDAGTYTCLATNSRGVDEASADLIVW-ARTRITKSPQDQSVIKGTQASMVCGVTHDPRVT 516

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTK 769
           V Y+W  +G  +G M+ N    P I +D  G L I+     D G Y C V S  G  S  
Sbjct: 517 VRYVWEKDGAALG-MESN----PRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRS 571

Query: 770 TTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
             + V   P  P      +    + +  + W        P+  Y +    N N+ W    
Sbjct: 572 AHLRVRQLPHAPEHPVATLSTTERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPW---- 626

Query: 828 EHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
             V+   VD      EA+   V  LVP  +Y+F++ A N++G G+ S  + + + P + P
Sbjct: 627 -TVLLASVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPP 680

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYG 942
              P  +   G     + I W+P P   QN     Y I +         +F++ T  +  
Sbjct: 681 TAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYVIRYCLAGLPVGYQFKNITDADVN 740

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           N+ +  + I     +T YE++V A N  G G
Sbjct: 741 NLLLEDLII-----WTNYEIEVAAYNSAGLG 766



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y +  R   +  W     +VS +   
Sbjct: 1392 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPSGRWALHSASVSHNAST 1450

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ I
Sbjct: 1451 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTII 1498

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI- 951
                     + I W+P P +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1499 SVTPHTTTSVLIRWQPPPEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1558

Query: 952  ----------PSEFYYT--------EYEVKVQAINDVGPGPES 976
                      PS  +Y          YE+++   N VG GP S
Sbjct: 1559 SMYSMRNLSRPSLTHYELDNLNKHRRYEIRMSVYNAVGEGPLS 1601



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G P SP  +       P  AP  +   G     L ++WEP P E QN
Sbjct: 1585 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1643

Query: 916  APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW  +++N TE  ++  L E G      V++ +   YT Y V V A N  G
Sbjct: 1644 GDIQGYKIYFWEAQRQNVTERVKTLFLAESG------VKLKNLTGYTAYMVSVAAFNAAG 1697

Query: 972  PGPES 976
             GP S
Sbjct: 1698 DGPRS 1702



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 53/288 (18%)

Query: 718  NGVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKIST 768
            +G RI   + N   T      PN+ ++    GL  +T  +     E   +     G++S 
Sbjct: 916  SGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSA 971

Query: 769  KTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
             T  I  G PP LPG    + +  +   S T+Q+  G      I+ + + A+        
Sbjct: 972  ST--ISSGVPPELPGAPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVG------ 1023

Query: 825  NVSEHVIGKE-----VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                 V+G+      + + T   +A    V  L P++ Y F++   N +G   PS PS +
Sbjct: 1024 -----VVGEGEEWLLIHQLTNEPDARSLEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRK 1078

Query: 878  YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQS 935
              T    P  AP+ +         L + W PLP  + N    ++ YKI   K +  +   
Sbjct: 1079 IQTLQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRADGHG 1135

Query: 936  ETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESE 977
            +TL       +   R+  E+       +TEY V+VQA N +G GP S 
Sbjct: 1136 KTLSH-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSH 1178



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  + W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1822 IIVRYSSAIAVHWSSGDPGRGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1878

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PS PS   + PA K
Sbjct: 1879 ---ILKPGVSYDFRVIAVNDYGFGTPSGPS--QSVPAQK 1912



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 78/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +T    +  V+     +
Sbjct: 1291 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANAATVEVLAPSARQ 1349

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1350 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1401

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY +  R+     +   +     N    VV     F
Sbjct: 1402 DVKARSVLLSWE--PGSDGLSPVRYYTVQTRELPSGRWALHSASVSHNASTFVVDRLKPF 1459

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1460 --TSYKFRVKATNDIG 1473



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R + +    +  
Sbjct: 1082 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1139

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1140 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHTVMGRTRESVPSS 1191

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1192 GPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS 1250

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1251 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1279


>gi|410984299|ref|XP_003998467.1| PREDICTED: protein sidekick-1 [Felis catus]
          Length = 2117

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 191/798 (23%), Positives = 315/798 (39%), Gaps = 61/798 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   D       + L    S+ 
Sbjct: 11  PYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMHND-------SELTTYSSEY 59

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +Q
Sbjct: 60  KYIIPS--------LQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGNFMDTDQRKTVSQ 111

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 369
                +   P ++ P     W R+   + +    R+ ++ +  L   A    DA  Y   
Sbjct: 112 GHAAVLDFLPISSCPRPQVTWFREG--HKIVPSSRIAITLENQLVILAATAGDARVYYAQ 169

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAFGYPV 428
             ++ +   +  P   L V   +   +   P    P           ++ LECVA   PV
Sbjct: 170 AVNERNGDSKTSPLVHLSVAGDAGAPETVAPVIVIPPGNRSVVAGSSEITLECVANARPV 229

Query: 429 PSY--NWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT---I 483
            S   NW R G  +   +    F R LTI N    D G Y+C A+   S  E +     +
Sbjct: 230 ESLSVNWKRNGVRV--TSGLHGFGRRLTISNPTSADTGAYVCEATLTGSTFEPATAKAFL 287

Query: 484 SIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           SI   P FT  P     +D +  +   C A GVP  T  W+++   +      L +    
Sbjct: 288 SIIEPPYFTAEPERRILVDVEETVDIVCRAMGVPLPTLQWYKDAVSIGK----LHNPRYK 343

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            +    L I++L PE D  ++QC A N      +   L V  + P+F + P++  T   +
Sbjct: 344 MLASGGLRIQHLRPE-DSGIFQCFASNDGGEIQTYTYLDVTNVAPAFTQLPVD--TTVTD 400

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSC 658
           G   T+ C    APKP   W++  +I+ SG  R     + E+G L I+PV   D+G Y+C
Sbjct: 401 GMTATLRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLESGGLQITPVFIQDAGNYTC 460

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            ATN  G   +   L V +  S       ++ I       L C A  +  + + Y+W  +
Sbjct: 461 YATNTEGSLSASAALTVWNRTSIVNPPEDRVVIKG-TTATLHCGATHDPRITLRYVWKKD 519

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
              I     + +    +  DG L+ I+     D G+Y C + S  G  S    + V   P
Sbjct: 520 NAIITPSGSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEILSEGGNDSRTARLEVIELP 575

Query: 779 GLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
             P  +   +   H  + T+ W        P+ +Y I+  +  NS W  V    +G E+ 
Sbjct: 576 HSPQNLLASLNSSHSHTVTLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSNVGPEMT 633

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
             T R        L P  TY+F+V A N++G G+ S+ + +   P + P   P  I   G
Sbjct: 634 GVTVRG-------LTPARTYQFRVCAVNQVGKGQYSAETSRLVLPEEPPSAPPKNIVASG 686

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 955
                + + W+P P  + N     Y + +R      E Q   +    +  +    +    
Sbjct: 687 RTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIT---SPEVNYCLVTELI 743

Query: 956 YYTEYEVKVQAINDVGPG 973
            +T+YE++V A N  G G
Sbjct: 744 IWTQYEIQVAAYNGAGLG 761



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G+    P T Y I  R +    W      +  K
Sbjct: 1806 AEGSPGSPRDVSVSK-SASELTLQWTEGSVGRTPTTGYVIEVRPSDEGLW-----DMFAK 1859

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R       S++  L    TYEF+V+A N+ GYGEPSSPS   +   + P+
Sbjct: 1860 DIPRSATSYTVSLDT-LRQGVTYEFRVVAVNQAGYGEPSSPSTAVSAQVETPF 1911



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 39/230 (16%)

Query: 768  TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +        
Sbjct: 964  TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG------ 1017

Query: 825  NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                  IG+E   V  Y    E   + +    L P++ Y F++   N +G    S  S  
Sbjct: 1018 -----AIGEEEEWVSLYEEENEPDAQTLEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRV 1072

Query: 878  YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 934
              T    P  AP+ I         L + W PLP  + N    ++ Y+I +WR     +  
Sbjct: 1073 IQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRPDLRPQAL 1132

Query: 935  SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEV 978
            ++ + +         R+  EF       +TEYE+++QA N +G GP SE 
Sbjct: 1133 AQVIND---------RLEREFTIEGLEEWTEYELQMQAFNAIGAGPWSEA 1173



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 36/217 (16%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 839
            V   EV   S  +QW  G+    PI ++ +  R      W++   ++S       V+R  
Sbjct: 1392 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWHTYSSSISHEATACAVER-- 1449

Query: 840  GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
                      L P+++Y+ ++ A N++G  + S+ +    T  D P + PS I       
Sbjct: 1450 ----------LRPFTSYKLRLKATNDIGDSDFSAETDAVTTLQDVPGEPPSSISVTPHTT 1499

Query: 900  GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGN 943
              + I W+P   E  N     Y+I++R+   +      S+TLK              +  
Sbjct: 1500 SSVLIQWQPPRDESLNGLLQGYRIYYRELESEASAATASKTLKTPSALRAELTAQSSFKT 1559

Query: 944  VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
            V  +      E      Y  YEV + A N +G  P S
Sbjct: 1560 VNSSSTLTTYELTHLKKYRRYEVVLTAYNIIGESPAS 1596



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 20/214 (9%)

Query: 767  STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 821
            S++    ++ PP + P  + V    +TS  ++W    D   NG P +  Y+I     W  
Sbjct: 1069 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRI---KYWRP 1125

Query: 822  TWF-NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
                     VI   ++R     E +IE  L  W+ YE ++ A N +G G P S + +  T
Sbjct: 1126 DLRPQALAQVINDRLER-----EFTIEG-LEEWTEYELQMQAFNAIGAG-PWSEAVRGRT 1178

Query: 881  PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 939
                P  AP  +         + ++W  +P + QN   + YKI +R K  D E +S  ++
Sbjct: 1179 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKELDPEPRSHVVR 1238

Query: 940  EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
              GN   + + +     +  YE++V A   +G G
Sbjct: 1239 --GNHTQSAL-LTGLRKFVLYELQVLAFTRIGNG 1269



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  +         L ++WEP P E QN
Sbjct: 1580 YEVVLTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWEPPPPESQN 1638

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YK+++ +  D++ ++E +K    +   V+++ +   +T Y V + A N  G GP 
Sbjct: 1639 GNIQGYKVYYWEA-DSQNETEKMKVL-FLPETVLKLKNLTGHTPYRVSISAFNAAGDGPR 1696

Query: 976  SE 977
            S+
Sbjct: 1697 SD 1698


>gi|301781638|ref|XP_002926235.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2-like [Ailuropoda
           melanoleuca]
          Length = 2167

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 198/814 (24%), Positives = 338/814 (41%), Gaps = 91/814 (11%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W   +                
Sbjct: 28  APYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------EL 70

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  +
Sbjct: 71  TKFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQS 126

Query: 309 QNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNY 366
            + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y
Sbjct: 127 VSHGEAAVIRAPRIASFPRPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY 184

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK------AG-DKVRL 419
              VQ+     G N    P+ +      + +  P +        P       AG  +V +
Sbjct: 185 --YVQAVNDKNGDNKTSQPVTL----AVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTM 238

Query: 420 ECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477
           ECVA   P+   +  W + G PL  +    ++NR LTIP+    D G Y C A    S++
Sbjct: 239 ECVANARPLIKLHIIWKKDGVPL--SGGLSDYNRRLTIPSPMGSDAGYYECEAVLRSSSV 296

Query: 478 ESSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSE 532
            S +    +S+   P F +   ++H+  + +  +   C A GVP  + SW+++  ++  +
Sbjct: 297 PSVIRGAFLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSISWYKDAAVVEVD 355

Query: 533 TLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
            L      R++ + D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  +
Sbjct: 356 KL-----SRFWQRSDGGLQISGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITR 409

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISP 647
            PL+S     +G +V + C    AP+P   W+K   I+ SG     R  + E+G+LL+SP
Sbjct: 410 GPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSP 467

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
               D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    + 
Sbjct: 468 THISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDP 526

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKI 766
            + V Y+W  +G  +G  +      P I +D  G L I+     D G Y C V S  G  
Sbjct: 527 RVTVRYVWEKDGATLGTEN-----NPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGND 581

Query: 767 STKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
           S    + V   P  P      +    + +  + W        P+  Y +    N N+ W 
Sbjct: 582 SRSAHLRVRQLPHAPEHPVATLSTAERRAINLTWAKPFDGNSPLLRYVLEMSEN-NAPW- 639

Query: 825 NVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
                V+   VD      EA+   V  LVP  +Y+F++ A N++G G+ S  + + + P 
Sbjct: 640 ----TVLLASVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 690

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLK 939
           + P   P  +   G     + I W+P P   QN     Y I +         +F++ T  
Sbjct: 691 EPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDA 750

Query: 940 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           +  N+ +  + I     +T YE++V A N  G G
Sbjct: 751 DVNNLLLEDLII-----WTNYEIEVAAYNSAGLG 779



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P E QN
Sbjct: 1598 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1656

Query: 916  APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW  +++N TE  ++  L E G      V++ +   YT Y V V A N  G
Sbjct: 1657 GDIQGYKIYFWEAQRRNLTERVKTLFLAENG------VKLKNLTGYTAYMVSVAAFNAAG 1710

Query: 972  PGPES 976
             GP S
Sbjct: 1711 DGPRS 1715



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 832
            PPG P  VQ  +V   S  + W  G+    P+ +Y +  R      W     +VS +   
Sbjct: 1405 PPGKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPGGRWALHSASVSHNASA 1463

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1464 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIV 1511

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1512 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1571

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1572 SLYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1614



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1828 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1884

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1885 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1918



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 109/263 (41%), Gaps = 39/263 (14%)

Query: 733  PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 785
            PN+ ++    GL  +T  +     E   +     G++S  T  I  G PP LPG    + 
Sbjct: 950  PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 1003

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 842
            +  +   S T+Q+  G      I+ + + A+         W  V  H +  E D    R 
Sbjct: 1004 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLTNEPD---ARS 1058

Query: 843  EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
                E  L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L
Sbjct: 1059 MEVPE--LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1116

Query: 903  SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 956
             + W PLP  + N    ++ YKI   K +  +   +TL       +   R+  E+     
Sbjct: 1117 WLRWVPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH-----VVQDRVEREYTIEDL 1168

Query: 957  --YTEYEVKVQAINDVGPGPESE 977
              +TEY V+VQA N +G GP S+
Sbjct: 1169 EEWTEYRVQVQAFNAIGSGPWSQ 1191



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y++  R N  +T    +  V+     +
Sbjct: 1304 PGPPVGILFPEVRTTSVRLIWQPPAAPNGIILAYQVTHRLN-ATTANTATVEVLAPSARQ 1362

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q P +  +   
Sbjct: 1363 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPGKPVVQQE 1414

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY +  R+     +   +     N    VV     F
Sbjct: 1415 DVKARSVLLSWE--PGSDGLSPVRYYTVQTRELPGGRWALHSASVSHNASAFVVDRLKPF 1472

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1473 --TSYKFRVKATNDIG 1486



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R + +    +  
Sbjct: 1095 LQAPPDMAPANVTLRTASETSLWLRWVPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1152

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1153 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1204

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1205 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVIYKEK-DSDSQPRFWLVEGNSSRS 1263

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1264 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1292


>gi|426346933|ref|XP_004041123.1| PREDICTED: protein sidekick-2 [Gorilla gorilla gorilla]
          Length = 2172

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 196/810 (24%), Positives = 329/810 (40%), Gaps = 85/810 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 26  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 68

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 69  KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 124

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y 
Sbjct: 125 SHGEAAVIRAPRIASFPQPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY- 181

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-------PEAPKAGDKVRLE 420
             VQ+     G N    P+ +      + +  P +                    +V LE
Sbjct: 182 -YVQAVNDKNGDNKTSQPITL----TVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLE 236

Query: 421 CVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           CVA   P+   +  W + G  L  +    + NR LTIPN    D G Y C A    S++ 
Sbjct: 237 CVANARPLIKLHIIWKKDGVLL--SGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVP 294

Query: 479 SSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSET 533
           S V    +S+   P F +   ++H+  + +  +   C A GVP  + +W+++  ++  E 
Sbjct: 295 SVVRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAVVEVEK 353

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L    Q      D  L +  L P+ D  M+QC A+N      +S  L V ++ P+  + P
Sbjct: 354 LTRFRQR----SDGGLQVSGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGP 408

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVS 649
           L+S     +G +V + C    AP+P   W+K   I+ SG     R    E+G+LLISP  
Sbjct: 409 LDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTH 466

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  +
Sbjct: 467 ISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRV 525

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 768
            + YIW  +G  +G         P I +D  G L I+     D G Y C V S  G  S 
Sbjct: 526 TIRYIWEKDGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSR 580

Query: 769 KTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
              + V   P  P      +  V + +  + WT       P+  Y I+  +  N+ W   
Sbjct: 581 SAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW--- 636

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
              V+   VD    +  +     LVP  +Y+F++ A N++G G+ S  + + + P + P 
Sbjct: 637 --TVLLASVD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPT 691

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGN 943
             P  +   G     + I W+P P   QN     Y I +         +F++ T  +  N
Sbjct: 692 APPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNN 751

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           + +  + I     +T YE++V A N  G G
Sbjct: 752 LLLEDLII-----WTNYEIEVAAYNSAGLG 776



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 35/261 (13%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 947  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+         W  +  H +  E D     +   
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1058 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116

Query: 906  WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 956
            W PLP  + N    ++ YKI + R     +  S  +++         R+  E+       
Sbjct: 1117 WMPLPEMEYNGNPESVGYKIKYSRSDGHGKMLSHVVQD---------RVEREYTIEDLEE 1167

Query: 957  YTEYEVKVQAINDVGPGPESE 977
            +TEY V+VQA N +G GP S+
Sbjct: 1168 WTEYRVQVQAFNAIGSGPWSQ 1188



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  ++ N TE + +TL    N     V++ +   YT Y V V A N  G 
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYVVSVAAFNAAGD 1708

Query: 973  GPES 976
            GP S
Sbjct: 1709 GPRS 1712



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 87/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R      W     +VS +   
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASS 1460

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1461 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 78/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   AT    I  Y+I  R N  +      E V+     +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPATPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q PSR  +   
Sbjct: 1360 YTATS-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1411

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              +   + +SWE  P     +P  YY I  R+     +   +     N    VV     F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASSFVVDRLKPF 1469

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKMLS-- 1149

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289


>gi|383857080|ref|XP_003704034.1| PREDICTED: protein sidekick-like [Megachile rotundata]
          Length = 2176

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 203/789 (25%), Positives = 313/789 (39%), Gaps = 74/789 (9%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYH 273
           L C A GYP P Y+WFK+             PLS++    S     I   R+ ED G YH
Sbjct: 66  LQCQARGYPQPKYKWFKDGV-----------PLSNE--LTSEPYFRIQSTRR-EDAGVYH 111

Query: 274 CKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPT-NYPGVNYYWAR 332
           C A+N  GSI SE +  A  ++G F       +  ++   A+   PP  ++P  +  W  
Sbjct: 112 CVATNDVGSIFSERITFAVAYMGVFEDLTERIVSVKSGSAAVLTLPPIESHPAPDVTW-- 169

Query: 333 DYFPNFVEEDKRVF----VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
                F  +   ++     S    L      + D G Y     +       N PFF L+V
Sbjct: 170 -----FASDGSLLYGIKYASVHHTLLILNASESDQGLYRARAINTQLGKEENSPFFKLQV 224

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYN--WTRRGSPLPRN--- 443
              +N          P+   +  K  D   + C+A    +      WT+ G P+  +   
Sbjct: 225 TGDANADVAPAIIVKPQDT-QIIKDQDVTYIHCIANARSLHELRTLWTKDGIPIENSRIS 283

Query: 444 -AYFENFNRILTIPNVKVEDQGEYICRA---SNDRSALESSVTISIQAEPNFTIPLTDKH 499
            ++ +++NR L + +  +   G Y C     S     + +S  + +  +P F   L  + 
Sbjct: 284 YSFNDSWNRTLALMSANITYTGVYSCHVDLRSGGYPTVNASAKVVVYEKPAFITELKRET 343

Query: 500 M-DNQADLTWTCEAFGVPDVTYSWFRNGE----LLNSETLPLEDQDRYFIQ-DNVLTIRY 553
           + D  + +T  C+A GVP    SWFRN E    LL S         RY ++ D  LTI+ 
Sbjct: 344 LSDYGSTVTLPCDAVGVPPPNISWFRNAEPVDHLLGS---------RYAMEEDGSLTIKK 394

Query: 554 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
           L  + D  M+QC A N++    S   L+  T  P  +  P        +G + T+ CN  
Sbjct: 395 LTMD-DSGMFQCLAANEVGEASSYTWLKAKTSGPIMENGPQNLTIL--DGKDATLSCNAV 451

Query: 614 AAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
           AAP P   W  +  I +   GR ++ +NG+LLI+ V  +D+G Y+C   N  G       
Sbjct: 452 AAPIPNTTWIYNDTIPVEIAGRVQVLDNGDLLIAAVKPNDAGKYTCIRANEAGSVNGSAY 511

Query: 673 LIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           L VL      +  PP    + +     LQ + S     L D+A  W HN   I       
Sbjct: 512 LTVLVRTQIVQ--PPVDTSVLLGYTAELQCKVSNDPSVLYDIA--WFHNSQVINTQASQR 567

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 789
           ++  +     G LEI     +D GEY C V S  G  +    + V   P  P  V    V
Sbjct: 568 VKMRS----DGTLEIVAVRASDVGEYMCSVVSPGGNETRSARLSVIELPFAPINVMADRV 623

Query: 790 HKTS---ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            + S     + W  G     P   + +  R   +      S      E D  + +    +
Sbjct: 624 ERISPRTINVSWVPGFDGNSPTKKFIVQRREVSDLGPIPDSALNWITECDNVSAQSRWVL 683

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
            N L   + Y+F+V A N +G G PS PS     P + P   P    G      ++   W
Sbjct: 684 LNNLKAAAAYQFRVSAENSVGEGPPSDPSNVVALPQEPPSGPPVGFVGSARSSSEIITQW 743

Query: 907 EPLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 964
           +    E +N   + Y + +R    ND+ +   T++   N       I     + +Y V++
Sbjct: 744 QLPLEEYRNGHILGYVLRYRLYGYNDSPW---TIQNITNEAQRNYLITDLITWKDYIVQI 800

Query: 965 QAINDVGPG 973
            A ND G G
Sbjct: 801 AAYNDKGVG 809



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 19/250 (7%)

Query: 728  NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----PGLPGG 783
            + L   N   +  L +I +       ++E V  +++G    K  VI  G     P  P  
Sbjct: 977  DSLRVENFTANDLLAKIEHLQAMTHYKFEVVAWTSIGPGKPKVAVIQSGVEPVLPEPPTK 1036

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            + +  +   S  +Q+T G      IT + + A+T  N+TW+N+ E              +
Sbjct: 1037 LALSNIDAFSVVLQFTPGFDGNSSITKWTVQAQTTRNTTWYNIYE----------VSDPD 1086

Query: 844  ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            AS   V  L+P+  Y+ ++IA N +G  +PS P+ ++ T    P   P  +        +
Sbjct: 1087 ASTITVGGLIPFMQYKLRLIANNVVGASQPSEPTKEFQTIQAPPSHPPRNVTVRAMSATE 1146

Query: 902  LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 961
            L + W PL + +       Y + + +      +S T++++      +  +     Y  YE
Sbjct: 1147 LRVRWIPLQQVEWYGNPRGYNVTYTEVRTNTSKSITIEDHTANSYILENVEE---YALYE 1203

Query: 962  VKVQAINDVG 971
            V +QA NDVG
Sbjct: 1204 VVMQAFNDVG 1213



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 77/198 (38%), Gaps = 13/198 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            E  PG P  V   +V  T+A I W         I  YK++   N      N  +H   KE
Sbjct: 1328 EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEILAYKVMFHLN------NSQDHQFSKE 1381

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
               +           L P   Y F V A   LG+G+ +          ++P QAPS    
Sbjct: 1382 ---FPASDRTFRATGLEPEKYYMFSVTAQTRLGWGKTAYAIVFTTNNRERP-QAPSMPQV 1437

Query: 895  GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
               ++    I++   P     AP  YY +  + +N   FQ  T+ E     +      + 
Sbjct: 1438 SRSQVQSRQITFSWTPGRDGFAPLRYYTV-QQSENSGPFQ--TIPERVEPTLTSYTANNL 1494

Query: 955  FYYTEYEVKVQAINDVGP 972
              +T Y+ ++QA ND+GP
Sbjct: 1495 KPFTLYQFRIQATNDIGP 1512



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 770  TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
            TT   EG P  P  + V +   +S  +QWT+GA+   PI  Y I  R   +S W  +   
Sbjct: 1832 TTGPQEGSPMAPSNLAVTKT-VSSVELQWTNGASGKGPILGYYIETRRKDDSRWQTIVRS 1890

Query: 830  VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
              G  +  Y+     S +N L+P ++Y F+VI+ N  G   P+  +    TP+
Sbjct: 1891 SNGP-LTEYS----VSYQN-LLPSTSYLFRVISYNRYGISYPAYSTETILTPS 1937



 Score = 40.4 bits (93), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 645
           +P F  +P  S     E     + C     P+PK+ W KDG  + +    ++       I
Sbjct: 44  EPRFTTQPSSSGNILSENRTKFLQCQARGYPQPKYKWFKDGVPLSN----ELTSEPYFRI 99

Query: 646 SPVSRDDSGIYSCTATNVHG 665
               R+D+G+Y C ATN  G
Sbjct: 100 QSTRREDAGVYHCVATNDVG 119


>gi|164518930|ref|NP_808547.3| protein sidekick-1 [Mus musculus]
 gi|90183173|sp|Q3UH53.1|SDK1_MOUSE RecName: Full=Protein sidekick-1; Flags: Precursor
 gi|74188487|dbj|BAE28004.1| unnamed protein product [Mus musculus]
          Length = 2193

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 191/799 (23%), Positives = 318/799 (39%), Gaps = 61/799 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W + D       + L    S+
Sbjct: 85  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWIRND-------SELTTYSSE 133

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 134 YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVS 185

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P  + P     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 186 QGHAALLNLLPIVSCPQPQVTWFREG--HKIIPSSRIAITLENQLVILATTASDAGAYYV 243

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYP 427
              ++ +   +  PF  L V   +   +   P         +  AG  +  LEC+A   P
Sbjct: 244 QAVNEKNGENKTSPFIHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARP 303

Query: 428 VP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVT 482
           V   S +W R G  L   +   ++ R LTI N    D G Y+C A+   S  E   +   
Sbjct: 304 VEELSVHWKRNGVRL--TSGLHSYGRRLTITNPTSADTGMYVCEATLRGSTFEPARARAF 361

Query: 483 ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           +SI   P FT  P +    + +  +   C A GVP  T  W+++   L+     L++   
Sbjct: 362 LSIIEPPYFTAEPESRILGEVEETMDIPCRAMGVPLPTLQWYKDAVPLSK----LQNPRY 417

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +    L I+ L+PE D  ++QC A N+     +   L V  + P+F +RP++  T   
Sbjct: 418 KVLPSGGLHIQKLSPE-DSGIFQCFASNEGGEVQTHTYLDVTNIAPAFTQRPVD--TTVT 474

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 657
           +G    + C    APKP   WK+  +I+ SG  R     + E+G L I+PV   D+G Y+
Sbjct: 475 DGMTAVLRCEVSGAPKPAITWKRGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYT 534

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N      +   L V +  S       ++ I       L C A  +    + Y+W  
Sbjct: 535 CYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTSLRYVWKK 593

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           + V I     + +    +  DG L+ I+     D G+Y C + S  G  S    + V   
Sbjct: 594 DNVVITASSSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEIISEGGSDSRTARLEVIEL 649

Query: 778 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           P  P  +   +      S T+ W        P+ +Y +    N NS W  V    +G E+
Sbjct: 650 PHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEM 707

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
              T        + L P  TY+F+V A N++G G+ S+ + +   P + P   P  I   
Sbjct: 708 TGVT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 760

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 954
           G     + + W+P P  + N     Y + +R      E Q   +    +  +    +   
Sbjct: 761 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDL 817

Query: 955 FYYTEYEVKVQAINDVGPG 973
             +T+YE++V A N  G G
Sbjct: 818 IIWTQYEIQVAAYNGAGLG 836



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G     P T Y I AR +    W      +  K
Sbjct: 1881 AEGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAK 1934

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R        ++  L    TYEF+V+A N+ G+GEPS PS   +  A+ P+
Sbjct: 1935 DIPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1986



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 21/158 (13%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 839
            V   EV   S  +QW  G+    PI ++ +  R      W +   ++S       V+R  
Sbjct: 1467 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1524

Query: 840  GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
                      L P+++Y+ ++ A N++G  + S+ +    T  D P + P  +       
Sbjct: 1525 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1574

Query: 900  GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 937
              + I W+P   E  N     Y+I++R     E +SET
Sbjct: 1575 SSVLIQWQPPRDESLNGLLQGYRIYYR-----ELESET 1607



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1655 YEVIMTAYNIIGESPASVPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1713

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YK+++ +  D+  ++E +K    +   VV+I     +T+Y + + A N  G GP+
Sbjct: 1714 GNIQGYKVYYWEA-DSRNETEKMKVL-FLPEPVVKIKDLTSHTKYLISISAFNAAGDGPK 1771

Query: 976  SE 977
            S+
Sbjct: 1772 SD 1773


>gi|126340549|ref|XP_001362992.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Monodelphis
           domestica]
          Length = 1183

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 217/863 (25%), Positives = 346/863 (40%), Gaps = 106/863 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+                +  +D+  P  I R     + P D + D  +     +I
Sbjct: 20  ILFLCQVM-----------SALEVPLDLVQPPTITR-----QSPKDYIIDPRE-----NI 58

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV  L +           G L+I+   + + 
Sbjct: 59  EIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPN----------SGTLVISITIEGKA 108

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++  +I     G+++          
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILK-GQSLVLPCRPPLGL 167

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 168 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 226

Query: 383 FFPLKV-------------FPHSNFQQLK-FPNNFPKTFPEAPKAGDK-------VRLEC 421
              +KV                S F   K +    PK      +   K       + LEC
Sbjct: 227 PISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLTPEGRTSHKEELRENVLSLEC 286

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P PS NWT+    LP N  +++NF + L I +V   D G+Y C A N    +E +
Sbjct: 287 IAEGLPTPSINWTKEDGELPINRTFYKNFKKTLNIIHVSEADSGKYKCTARNSLGFVEHT 346

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           ++++++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 347 ISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLINGVPI--EMAP-DDPS 403

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           R    D +L       E   A+YQC A N+     ++A + VL   P      ++     
Sbjct: 404 RKIDGDTILFSDVQ--ESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTE-VDLRYQV 460

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
                  + C    +P P   W K   G+++         +NG L I    +D +  Y+C
Sbjct: 461 ITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQEN-TYVFHDNGTLEIPVAQKDSADTYTC 519

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
              N  GM ++   L V       +Q   KI     R +   C+   +  L     W   
Sbjct: 520 VVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VSFECTVKHDPTLIATLTWLK- 577

Query: 719 GVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
                  D  EL  PN    +ID   L I N S  D   Y CV  +++  +S    + V 
Sbjct: 578 -------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 628

Query: 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGK 833
             P  P  +++    + S  + W  G  N  PIT + I     ++    W + ++ V G 
Sbjct: 629 DRPNPPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIWHHQTD-VPGI 687

Query: 834 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 893
           +          + E  L P+  Y F+VIA N +G   PS  S  Y T A +P + P+ + 
Sbjct: 688 Q---------TTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAEPEENPTAVE 738

Query: 894 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 952
           G G +  +L I+W+PL     N P + YK+ WR+K+ D E+ S  +    NV   +V   
Sbjct: 739 GIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 795

Query: 953 SEFYYTEYEVKVQAINDVGPGPE 975
             F    Y VKVQA+N+VG  PE
Sbjct: 796 PTF--VPYLVKVQALNNVGFAPE 816


>gi|38614294|gb|AAH60237.1| Sdk1 protein, partial [Mus musculus]
          Length = 2159

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 191/799 (23%), Positives = 318/799 (39%), Gaps = 61/799 (7%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W + D       + L    S+
Sbjct: 51  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWIRND-------SELTTYSSE 99

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +
Sbjct: 100 YKYIIPS--------LQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVS 151

Query: 309 QNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           Q     +   P  + P     W R+   + +    R+ ++ +  L   A    DAG Y  
Sbjct: 152 QGHAALLNLLPIVSCPQPQVTWFREG--HKIIPSSRIAITLENQLVILATTASDAGAYYV 209

Query: 369 NVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGYP 427
              ++ +   +  PF  L V   +   +   P         +  AG  +  LEC+A   P
Sbjct: 210 QAVNEKNGENKTSPFIHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARP 269

Query: 428 VP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVT 482
           V   S +W R G  L   +   ++ R LTI N    D G Y+C A+   S  E   +   
Sbjct: 270 VEELSVHWKRNGVRL--TSGLHSYGRRLTITNPTSADTGMYVCEATLRGSTFEPARARAF 327

Query: 483 ISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541
           +SI   P FT  P +    + +  +   C A GVP  T  W+++   L+     L++   
Sbjct: 328 LSIIEPPYFTAEPESRILGEVEETMDIPCRAMGVPLPTLQWYKDAVPLSK----LQNPRY 383

Query: 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 601
             +    L I+ L+PE D  ++QC A N+     +   L V  + P+F +RP++  T   
Sbjct: 384 KVLPSGGLHIQKLSPE-DSGIFQCFASNEGGEVQTHTYLDVTNIAPAFTQRPVD--TTVT 440

Query: 602 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 657
           +G    + C    APKP   WK+  +I+ SG  R     + E+G L I+PV   D+G Y+
Sbjct: 441 DGMTAVLRCEVSGAPKPAITWKRGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYT 500

Query: 658 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717
           C A N      +   L V +  S       ++ I       L C A  +    + Y+W  
Sbjct: 501 CYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTSLRYVWKK 559

Query: 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
           + V I     + +    +  DG L+ I+     D G+Y C + S  G  S    + V   
Sbjct: 560 DNVVITASSSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEIISEGGSDSRTARLEVIEL 615

Query: 778 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 835
           P  P  +   +      S T+ W        P+ +Y +    N NS W  V    +G E+
Sbjct: 616 PHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEM 673

Query: 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895
              T        + L P  TY+F+V A N++G G+ S+ + +   P + P   P  I   
Sbjct: 674 TGVT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 726

Query: 896 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 954
           G     + + W+P P  + N     Y + +R      E Q   +    +  +    +   
Sbjct: 727 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDL 783

Query: 955 FYYTEYEVKVQAINDVGPG 973
             +T+YE++V A N  G G
Sbjct: 784 IIWTQYEIQVAAYNGAGLG 802



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+QWT+G     P T Y I AR +    W      +  K
Sbjct: 1847 AEGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAK 1900

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R        ++  L    TYEF+V+A N+ G+GEPS PS   +  A+ P+
Sbjct: 1901 DIPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1952



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 21/158 (13%)

Query: 784  VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 839
            V   EV   S  +QW  G+    PI ++ +  R      W +   ++S       V+R  
Sbjct: 1433 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1490

Query: 840  GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 899
                      L P+++Y+ ++ A N++G  + S+ +    T  D P + P  +       
Sbjct: 1491 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1540

Query: 900  GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 937
              + I W+P   E  N     Y+I++R     E +SET
Sbjct: 1541 SSVLIQWQPPRDESLNGLLQGYRIYYR-----ELESET 1573



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S P   +   A  P  AP  +         L ++W+P P E QN
Sbjct: 1621 YEVIMTAYNIIGESPASVPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1679

Query: 916  APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
                 YK+++ +  D+  ++E +K    +   VV+I     +T+Y + + A N  G GP+
Sbjct: 1680 GNIQGYKVYYWEA-DSRNETEKMKVL-FLPEPVVKIKDLTSHTKYLISISAFNAAGDGPK 1737

Query: 976  SE 977
            S+
Sbjct: 1738 SD 1739


>gi|194387752|dbj|BAG61289.1| unnamed protein product [Homo sapiens]
          Length = 715

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 167/605 (27%), Positives = 256/605 (42%), Gaps = 45/605 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +    +K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 130 PMDLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 185

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 186 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 243

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 244 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 300

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 301 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDL 360

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 361 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 420

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 421 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 477

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 478 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 534

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 535 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 592

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +  
Sbjct: 593 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTV 651

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + IGN    E ++         L I   +  D G Y CV  + + +   K  
Sbjct: 652 SWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAY 702

Query: 772 VIVEG 776
           + V G
Sbjct: 703 LTVLG 707



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 120/300 (40%), Gaps = 30/300 (10%)

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN- 555
           D  +D + ++   CEA G P  ++ W RN    N    P     R   +   L I + + 
Sbjct: 146 DHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSG 202

Query: 556 --PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
             PE     YQC A+N+  T  S+     ++  P + K  L+      EG  +T+ CNP 
Sbjct: 203 GRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPP 261

Query: 614 AA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATN--VHGMDE 668
              P P   W       I    R     NG+L  S V   D    YSC A     H + +
Sbjct: 262 PGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 321

Query: 669 SKG-RLIVLHGPSYYEQLP----PKITIAAHR-----NLQLRCSAHTEELLDVAYIWTHN 718
                L VL      E+ P    P+ T ++       +L L C A      D+A  W   
Sbjct: 322 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKK 379

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           G   G++  ++ +  N N     L ITN S  D+GEY C+  + +G I    +V V+  P
Sbjct: 380 G---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 433



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL   C A GVP    +W++ G  L S+    E+ ++     NV        E D   Y 
Sbjct: 359 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 411

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A N++ +   +  +RV    P +   P       GE G   + C     PKP   W  
Sbjct: 412 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 468

Query: 625 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +G  + S      +      ++          +Y C  +N HG   +   + VL      
Sbjct: 469 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 522

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 734
             +PP++   + RN  +R   +    LD  +         W  NG +  N+D        
Sbjct: 523 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 576

Query: 735 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
              + G LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 577 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 617


>gi|237858682|ref|NP_001153805.1| neurofascin isoform 6 precursor [Homo sapiens]
          Length = 613

 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 167/605 (27%), Positives = 256/605 (42%), Gaps = 45/605 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +    +K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 319 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 375

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 376 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 432

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 433 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 490

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +  
Sbjct: 491 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTV 549

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + IGN    E ++         L I   +  D G Y CV  + + +   K  
Sbjct: 550 SWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAY 600

Query: 772 VIVEG 776
           + V G
Sbjct: 601 LTVLG 605



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 120/300 (40%), Gaps = 30/300 (10%)

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN- 555
           D  +D + ++   CEA G P  ++ W RN    N    P     R   +   L I + + 
Sbjct: 44  DHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSG 100

Query: 556 --PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
             PE     YQC A+N+  T  S+     ++  P + K  L+      EG  +T+ CNP 
Sbjct: 101 GRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPP 159

Query: 614 AA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATN--VHGMDE 668
              P P   W       I    R     NG+L  S V   D    YSC A     H + +
Sbjct: 160 PGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 219

Query: 669 SKG-RLIVLHGPSYYEQLP----PKITIAAHR-----NLQLRCSAHTEELLDVAYIWTHN 718
                L VL      E+ P    P+ T ++       +L L C A      D+A  W   
Sbjct: 220 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKK 277

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           G   G++  ++ +  N N     L ITN S  D+GEY C+  + +G I    +V V+  P
Sbjct: 278 G---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 331



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 145/397 (36%), Gaps = 51/397 (12%)

Query: 408 PEAPKAGDKVRLEC-VAFGYPVPSYNWTRRG-SPLPRNAYF-ENFNRILTIPNVKVED-Q 463
           P   + G  + L+C    G P P   W      P+ ++    +  N  L   NV ++D Q
Sbjct: 143 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQ 202

Query: 464 GEYICRA---------SNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTC 510
            +Y C A           +   L+   T  + +  P+F  P    + + +    DL   C
Sbjct: 203 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLEC 262

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQ 570
            A GVP    +W++ G  L S+    E+ ++     NV        E D   Y C A N+
Sbjct: 263 IASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYFCLASNK 315

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 630
           + +   +  +RV    P +   P       GE G   + C     PKP   W  +G  + 
Sbjct: 316 MGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMVNGEPLQ 372

Query: 631 SG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
           S      +      ++          +Y C  +N HG   +   + VL        +PP+
Sbjct: 373 SAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL-------DVPPR 425

Query: 689 ITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPNINIDGG 740
           +   + RN  +R   +    LD  +         W  NG +  N+D           + G
Sbjct: 426 ML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV----YENG 478

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
            LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 479 SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515


>gi|119611930|gb|EAW91524.1| hCG16415, isoform CRA_a [Homo sapiens]
          Length = 690

 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 167/605 (27%), Positives = 256/605 (42%), Gaps = 45/605 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +    +K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 105 PMDLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 160

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 161 VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 218

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 219 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 275

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 276 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDL 335

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 336 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 395

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 396 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 452

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 453 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 509

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 510 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 567

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +  
Sbjct: 568 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTV 626

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + IGN    E ++         L I   +  D G Y CV  + + +   K  
Sbjct: 627 SWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAY 677

Query: 772 VIVEG 776
           + V G
Sbjct: 678 LTVLG 682



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 120/300 (40%), Gaps = 30/300 (10%)

Query: 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN- 555
           D  +D + ++   CEA G P  ++ W RN    N    P     R   +   L I + + 
Sbjct: 121 DHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSG 177

Query: 556 --PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
             PE     YQC A+N+  T  S+     ++  P + K  L+      EG  +T+ CNP 
Sbjct: 178 GRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPP 236

Query: 614 AA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATN--VHGMDE 668
              P P   W       I    R     NG+L  S V   D    YSC A     H + +
Sbjct: 237 PGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 296

Query: 669 SKG-RLIVLHGPSYYEQLP----PKITIAAHR-----NLQLRCSAHTEELLDVAYIWTHN 718
                L VL      E+ P    P+ T ++       +L L C A      D+A  W   
Sbjct: 297 KNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKK 354

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
           G   G++  ++ +  N N     L ITN S  D+GEY C+  + +G I    +V V+  P
Sbjct: 355 G---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 408



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL   C A GVP    +W++ G  L S+    E+ ++     NV        E D   Y 
Sbjct: 334 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 386

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A N++ +   +  +RV    P +   P       GE G   + C     PKP   W  
Sbjct: 387 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 443

Query: 625 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +G  + S      +      ++          +Y C  +N HG   +   + VL      
Sbjct: 444 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 497

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 734
             +PP++   + RN  +R   +    LD  +         W  NG +  N+D        
Sbjct: 498 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 551

Query: 735 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
              + G LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 552 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 592


>gi|119611931|gb|EAW91525.1| hCG16415, isoform CRA_b [Homo sapiens]
          Length = 718

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 168/610 (27%), Positives = 258/610 (42%), Gaps = 45/610 (7%)

Query: 185 KIPRGPYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVAN 241
           +IP     + QP  +    +K  I++   +I + C A G P PS+ W +      R    
Sbjct: 128 EIPMDRESLTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNI 183

Query: 242 LIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FI 295
             DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L        
Sbjct: 184 AKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLW 241

Query: 296 GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYF 355
            + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G LYF
Sbjct: 242 PKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYF 298

Query: 356 S-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA- 413
           S  + Q    +YSCN +   + T +    F LKV       +      +P+    +    
Sbjct: 299 SNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVL 358

Query: 414 -GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRAS 471
            G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C AS
Sbjct: 359 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS 418

Query: 472 NDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNS 531
           N   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S
Sbjct: 419 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS 478

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
                 + +R    D ++        R  A+YQC   N+     ++A + VL + P    
Sbjct: 479 AP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS 533

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPV 648
            P              + C    +P P   W K+G   GS   GG   ++ENG+L I  +
Sbjct: 534 -PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMI 590

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
            ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  
Sbjct: 591 RKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPS 649

Query: 709 LDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 766
           L +   W  +   + IGN    E ++         L I   +  D G Y CV  + + + 
Sbjct: 650 LKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQD 700

Query: 767 STKTTVIVEG 776
             K  + V G
Sbjct: 701 LAKAYLTVLG 710



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 129/324 (39%), Gaps = 37/324 (11%)

Query: 473 DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE 532
           DR +L    TI+ Q+         D  +D + ++   CEA G P  ++ W RN    N  
Sbjct: 132 DRESLTQPPTITKQSA-------KDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIA 184

Query: 533 TLPLEDQDRYFIQDNVLTIRYLN---PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589
             P     R   +   L I + +   PE     YQC A+N+  T  S+     ++  P +
Sbjct: 185 KDPRVSMRR---RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLW 241

Query: 590 KKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISP 647
            K  L+      EG  +T+ CNP    P P   W       I    R     NG+L  S 
Sbjct: 242 PKENLDP-VVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSN 300

Query: 648 VSRDDSGI-YSCTATN--VHGMDESKG-RLIVLHGPSYYEQLP----PKITIAAHR---- 695
           V   D    YSC A     H + +     L VL      E+ P    P+ T ++      
Sbjct: 301 VMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRG 360

Query: 696 -NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 754
            +L L C A      D+A  W   G   G++  ++ +  N N     L ITN S  D+GE
Sbjct: 361 MDLLLECIASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGE 412

Query: 755 YECVVKSTVGKISTKTTVIVEGPP 778
           Y C+  + +G I    +V V+  P
Sbjct: 413 YFCLASNKMGSIRHTISVRVKAAP 436



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL   C A GVP    +W++ G  L S+    E+ ++     NV        E D   Y 
Sbjct: 362 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 414

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A N++ +   +  +RV    P +   P       GE G   + C     PKP   W  
Sbjct: 415 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 471

Query: 625 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +G  + S      +      ++          +Y C  +N HG   +   + VL      
Sbjct: 472 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 525

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 734
             +PP++   + RN  +R   +    LD  +         W  NG +  N+D        
Sbjct: 526 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 579

Query: 735 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
              + G LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 580 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 620


>gi|344291041|ref|XP_003417245.1| PREDICTED: protein sidekick-1 [Loxodonta africana]
          Length = 2262

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 197/811 (24%), Positives = 330/811 (40%), Gaps = 87/811 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 226 PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 268

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F      +I + 
Sbjct: 269 KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGNFEEGEKRQIVSH 326

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 369
                +      ++P     W RD     +    R+ ++ +  L   +    DAG Y   
Sbjct: 327 GEAAVIRAPRIASFPQPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY--Y 382

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK-------AGDKVRLECV 422
           VQ+     G N    P+ +      + +  P +        P           +V LECV
Sbjct: 383 VQAVNDKNGDNKTSQPVTL----AVENVGGPADPIAPTIIIPPKNTSVVVGTSEVTLECV 438

Query: 423 AFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA---SNDRSAL 477
           A   P+   +  W + G  L  +    + NR LTIPN    D G Y C A   S+   A+
Sbjct: 439 ANARPLIKLHIIWKKDGVLL--SGGVSDHNRRLTIPNPTSSDAGYYECEAVLRSSSVPAV 496

Query: 478 ESSVTISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
                +S+   P F +   ++H+  + +  +   C A GVP  + +W+++  ++  E L 
Sbjct: 497 VRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAVVEVERL- 554

Query: 536 LEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594
                R+ +  D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + PL
Sbjct: 555 ----SRFRLHGDGGLQISGLLPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGPL 609

Query: 595 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSR 650
           +S     +G +V + C    AP+P   W+K   I+ SG     R  + E+G+LL+SP   
Sbjct: 610 DSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPTHI 667

Query: 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 710
            D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  + 
Sbjct: 668 SDAGTYACLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVT 726

Query: 711 VAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTK 769
           V Y+W  +G  +  M+ N    P I +D  G L I+     D G Y C V S  G  S  
Sbjct: 727 VRYVWEKDGATLA-MESN----PRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRS 781

Query: 770 TTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827
             + V   P  P     +   + K +  + W        P+  Y +    N N+ W    
Sbjct: 782 AHLRVRQLPHAPEHPVAILSTMEKRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPW---- 836

Query: 828 EHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
             V+   VD      EA+   V  LVP  +Y+F++ A N++G G+ S  + + + P + P
Sbjct: 837 -TVLLASVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPP 890

Query: 886 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYG 942
              P  +   G     + I W+P P   QN     Y I +         +F++ T  +  
Sbjct: 891 TAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDADVN 950

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           N+ +  + I     +T YE++V A N  G G
Sbjct: 951 NLLLEDLII-----WTNYEIEVAAYNSAGLG 976



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y + AR +    W ++    I KEV  YT   +  
Sbjct: 1922 IIVRYSSAIAIHWSSGDPGKGPITRYVLEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1978

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1979 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 2012



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 41/264 (15%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 1147 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1203

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD---RYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+             VIG+  +    Y    E  
Sbjct: 1204 IGPRSVTLQFRPGYDGKTSISRWLVEAQMG-----------VIGEGEEWQLVYQLHNEPD 1252

Query: 846  IENVLVP----WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
              ++ VP    ++ Y F++   N +G   PS PS +  T    P  AP+ +         
Sbjct: 1253 ARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETS 1312

Query: 902  LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 956
            L + W PLP  + N    ++ YKI   K + ++   +TL       +   R+  E+    
Sbjct: 1313 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDSHGKTLSH-----VVHDRVEREYTIED 1364

Query: 957  ---YTEYEVKVQAINDVGPGPESE 977
               +TEY V+VQA N +G GP S+
Sbjct: 1365 LEEWTEYRVQVQAFNAIGSGPWSQ 1388



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 85/224 (37%), Gaps = 47/224 (20%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y +  R   +  W     +VS +   
Sbjct: 1602 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQMRELPSGRWALHSASVSHNASS 1660

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ I
Sbjct: 1661 FMVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTII 1708

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKI-------------FWRKKN-------DTE 932
                     + I W+ L R+ Q  P   +               FW  +         T 
Sbjct: 1709 SVTPHTTTSVLIRWQMLMRQVQAEPETPFLTSSQGMLKLLALIYFWEAQRWNLTERVKTL 1768

Query: 933  FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            F +ET           V++ +   YT Y V V A N  G GP S
Sbjct: 1769 FLAET----------SVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1802



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 16/209 (7%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSE 828
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  + + + +      
Sbjct: 1292 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKI--KYSRSDSHGKTLS 1349

Query: 829  HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 888
            HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P   
Sbjct: 1350 HVVHDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSSG 1402

Query: 889  PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 948
            P+ +         + + W  +P   +N   + YK+ +++K+        L E GN   + 
Sbjct: 1403 PTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVVYKEKDSDAHPRFWLVE-GNASRS- 1460

Query: 949  VRIPSEFYYTEYEVKVQAINDVGPGPESE 977
             ++     Y  YEV+V A   +G G  S 
Sbjct: 1461 AQLTGLGKYVLYEVQVLAFTRIGDGSRSH 1489



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W         I  Y+I  R N  +T    +  V+     +
Sbjct: 1501 PGPPVGILFPEVRTTSVRLIWQPPTAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1559

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P + Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1560 YTATG-------LKPEAVYLFRITAQTRKGWGEAAEALVVTTERRDRP-QPPSKPVVQQE 1611

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY +  R+     +   +     N    +V     F
Sbjct: 1612 DVKARSVLLSWE--PGSDGLSPVRYYTVQMRELPSGRWALHSASVSHNASSFMVDRLKPF 1669

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1670 --TSYKFRVKATNDIG 1683


>gi|332248120|ref|XP_003273210.1| PREDICTED: neurofascin-like isoform 2 [Nomascus leucogenys]
          Length = 715

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 171/616 (27%), Positives = 259/616 (42%), Gaps = 48/616 (7%)

Query: 177 GMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 235
           G  IE P  + + P   KQ   D + D       ++I + C A G P PS+ W +     
Sbjct: 124 GGAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNPAPSFHWTR----N 174

Query: 236 DRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAF 292
            R      DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L  
Sbjct: 175 SRFFNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQV 232

Query: 293 G---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                  + NL   P +  +     + C+PP   P    +W        + +DKRV   +
Sbjct: 233 SKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGH 289

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFP 408
           +G LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+   
Sbjct: 290 NGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTA 349

Query: 409 EAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGE 465
            +     G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GE
Sbjct: 350 SSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGE 409

Query: 466 YICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRN 525
           Y C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  N
Sbjct: 410 YFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVN 469

Query: 526 GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL 585
           GE L S      + +R    D ++        R  A+YQC   N+     ++A + VL +
Sbjct: 470 GEPLQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDV 524

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGN 642
            P     P              + C    +P P   W K+G   GS   GG   ++ENG+
Sbjct: 525 PPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGS 581

Query: 643 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 702
           L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C 
Sbjct: 582 LEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECR 640

Query: 703 AHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760
              +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  
Sbjct: 641 VKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVAS 691

Query: 761 STVGKISTKTTVIVEG 776
           + + +   K  + V G
Sbjct: 692 TELDQDLAKAYLTVLG 707



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 121/302 (40%), Gaps = 30/302 (9%)

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554
           + D  +D + ++   CEA G P  ++ W RN    N    P     R   +   L I + 
Sbjct: 144 VKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFR 200

Query: 555 N---PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN 611
           +   PE     YQC A+N+  T  S+     ++  P + K  L+      EG  +T+ CN
Sbjct: 201 SGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCN 259

Query: 612 PEAA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATN--VHGM 666
           P    P P   W       I    R     NG+L  S V   D    YSC A     H +
Sbjct: 260 PPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTI 319

Query: 667 DESKG-RLIVLHGPSYYEQLP----PKITIAAHR-----NLQLRCSAHTEELLDVAYIWT 716
            +     L VL      E+ P    P+ T ++       +L L C A      D+A  W 
Sbjct: 320 QQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WY 377

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
             G   G++  ++ +  N N     L ITN S  D+GEY C+  + +G I    +V V+ 
Sbjct: 378 KKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 431

Query: 777 PP 778
            P
Sbjct: 432 AP 433



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 106/284 (37%), Gaps = 36/284 (12%)

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL   C A GVP    +W++ G  L S+    E+ ++     NV        E D   Y 
Sbjct: 359 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 411

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A N++ +   +  +RV    P +   P       GE G   + C     PKP   W  
Sbjct: 412 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 468

Query: 625 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +G  + S      +      ++          +Y C  +N HG   +   + VL      
Sbjct: 469 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 522

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 734
             +PP++   + RN  +R   +    LD  +         W  NG        + L+  N
Sbjct: 523 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG------QGSNLDGGN 573

Query: 735 INI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
            ++ + G LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 574 YHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 617


>gi|237858680|ref|NP_001005389.2| neurofascin isoform 5 precursor [Homo sapiens]
 gi|193786880|dbj|BAG52203.1| unnamed protein product [Homo sapiens]
          Length = 619

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 169/613 (27%), Positives = 259/613 (42%), Gaps = 48/613 (7%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +    +K  I++   +I + C A G P PS+ W +      R 
Sbjct: 26  EIPMDPSIQNELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 81

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 82  FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 139

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 140 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 196

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 197 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 256

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 257 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 316

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 317 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 376

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 377 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 431

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 432 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 488

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 489 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKH 547

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 548 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 598

Query: 764 GKISTKTTVIVEG 776
            +   K  + V G
Sbjct: 599 DQDLAKAYLTVLG 611



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 130/326 (39%), Gaps = 35/326 (10%)

Query: 476 ALESSVTISIQAE----PNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
           A+E  +  SIQ E    P  T      H+ D + ++   CEA G P  ++ W RN    N
Sbjct: 24  AIEIPMDPSIQNELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFN 83

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLN---PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
               P     R   +   L I + +   PE     YQC A+N+  T  S+     ++  P
Sbjct: 84  IAKDPRVSMRR---RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSP 140

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLI 645
            + K  L+      EG  +T+ CNP    P P   W       I    R     NG+L  
Sbjct: 141 LWPKENLDP-VVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYF 199

Query: 646 SPVSRDDSGI-YSCTATN--VHGMDESKG-RLIVLHGPSYYEQLP----PKITIAAHR-- 695
           S V   D    YSC A     H + +     L VL      E+ P    P+ T ++    
Sbjct: 200 SNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVL 259

Query: 696 ---NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 752
              +L L C A      D+A  W   G   G++  ++ +  N N     L ITN S  D+
Sbjct: 260 RGMDLLLECIASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDS 311

Query: 753 GEYECVVKSTVGKISTKTTVIVEGPP 778
           GEY C+  + +G I    +V V+  P
Sbjct: 312 GEYFCLASNKMGSIRHTISVRVKAAP 337



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 145/397 (36%), Gaps = 51/397 (12%)

Query: 408 PEAPKAGDKVRLEC-VAFGYPVPSYNWTRRG-SPLPRNAYF-ENFNRILTIPNVKVED-Q 463
           P   + G  + L+C    G P P   W      P+ ++    +  N  L   NV ++D Q
Sbjct: 149 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQ 208

Query: 464 GEYICRA---------SNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTC 510
            +Y C A           +   L+   T  + +  P+F  P    + + +    DL   C
Sbjct: 209 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLEC 268

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQ 570
            A GVP    +W++ G  L S+    E+ ++     NV        E D   Y C A N+
Sbjct: 269 IASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYFCLASNK 321

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 630
           + +   +  +RV    P +   P       GE G   + C     PKP   W  +G  + 
Sbjct: 322 MGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMVNGEPLQ 378

Query: 631 SG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
           S      +      ++          +Y C  +N HG   +   + VL        +PP+
Sbjct: 379 SAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL-------DVPPR 431

Query: 689 ITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPNINIDGG 740
           +   + RN  +R   +    LD  +         W  NG +  N+D           + G
Sbjct: 432 ML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV----YENG 484

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
            LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 485 SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521


>gi|410261560|gb|JAA18746.1| neurofascin [Pan troglodytes]
          Length = 613

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 167/605 (27%), Positives = 255/605 (42%), Gaps = 45/605 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S     
Sbjct: 319 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP--- 375

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 376 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 432

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 433 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 490

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +  
Sbjct: 491 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTV 549

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + IGN    E ++         L I   +  D G Y CV  + + +   K  
Sbjct: 550 SWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAY 600

Query: 772 VIVEG 776
           + V G
Sbjct: 601 LTVLG 605



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 121/302 (40%), Gaps = 30/302 (9%)

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554
           + D  +D + ++   CEA G P  ++ W RN    N    P     R   +   L I + 
Sbjct: 42  VKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFR 98

Query: 555 N---PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN 611
           +   PE     YQC A+N+  T  S+     ++  P + K  L+      EG  +T+ CN
Sbjct: 99  SGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCN 157

Query: 612 PEAA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATN--VHGM 666
           P    P P   W       I    R     NG+L  S V   D    YSC A     H +
Sbjct: 158 PPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTI 217

Query: 667 DESKG-RLIVLHGPSYYEQLP----PKITIAAHR-----NLQLRCSAHTEELLDVAYIWT 716
            +     L VL      E+ P    P+ T ++       +L L C A      D+A  W 
Sbjct: 218 QQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WY 275

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
             G   G++  ++ +  N N     L ITN S  D+GEY C+  + +G I    +V V+ 
Sbjct: 276 KKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 329

Query: 777 PP 778
            P
Sbjct: 330 AP 331



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 145/397 (36%), Gaps = 51/397 (12%)

Query: 408 PEAPKAGDKVRLEC-VAFGYPVPSYNWTRRG-SPLPRNAYF-ENFNRILTIPNVKVED-Q 463
           P   + G  + L+C    G P P   W      P+ ++    +  N  L   NV ++D Q
Sbjct: 143 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQ 202

Query: 464 GEYICRA---------SNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTC 510
            +Y C A           +   L+   T  + +  P+F  P    + + +    DL   C
Sbjct: 203 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLEC 262

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQ 570
            A GVP    +W++ G  L S+    E+ ++     NV        E D   Y C A N+
Sbjct: 263 IASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYFCLASNK 315

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 630
           + +   +  +RV    P +   P       GE G   + C     PKP   W  +G  + 
Sbjct: 316 MGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMVNGEPLQ 372

Query: 631 SG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
           S      +      ++          +Y C  +N HG   +   + VL        +PP+
Sbjct: 373 SAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL-------DVPPR 425

Query: 689 ITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPNINIDGG 740
           +   + RN  +R   +    LD  +         W  NG +  N+D           + G
Sbjct: 426 ML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV----YENG 478

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
            LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 479 SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515


>gi|410341803|gb|JAA39848.1| neurofascin [Pan troglodytes]
          Length = 715

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 169/618 (27%), Positives = 261/618 (42%), Gaps = 52/618 (8%)

Query: 177 GMDIENPDKIPRGPYFIKQPT-DVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ 235
           G  IE P  + + P   KQ   D + D       ++I + C A G P PS+ W +     
Sbjct: 124 GGAIEIPMDLTQPPTITKQSVKDHIVDPR-----DNILIECEAKGNPAPSFHWTRN---- 174

Query: 236 DRLVANLIDPLSDKRFTLS--GGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQL 290
               +   +   D R ++    G L+I+     R  E  G Y C A NKFG+ +S  ++L
Sbjct: 175 ----SRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRL 230

Query: 291 AFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347
                    + NL   P +  +     + C+PP   P    +W        + +DKRV  
Sbjct: 231 QVSKSPLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQ 287

Query: 348 SYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKT 406
            ++G LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+ 
Sbjct: 288 GHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQG 347

Query: 407 FPEAPKA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQ 463
              +     G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED 
Sbjct: 348 TASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDS 407

Query: 464 GEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWF 523
           GEY C ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W 
Sbjct: 408 GEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWM 467

Query: 524 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583
            NGE L    L   + +R    D ++        R  A+YQC   N+     ++A + VL
Sbjct: 468 VNGEPLQ---LAPPNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVL 522

Query: 584 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFEN 640
            + P     P              + C    +P P   W K+G   GS   GG   ++EN
Sbjct: 523 DVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYEN 579

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G+L I  + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL 
Sbjct: 580 GSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLE 638

Query: 701 CSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 758
           C    +  L +   W  +   + IGN    E ++         L I   +  D G Y CV
Sbjct: 639 CRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCV 689

Query: 759 VKSTVGKISTKTTVIVEG 776
             + + +   K  + V G
Sbjct: 690 ASTELDQDLAKAYLTVLG 707



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 121/302 (40%), Gaps = 30/302 (9%)

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554
           + D  +D + ++   CEA G P  ++ W RN    N    P     R   +   L I + 
Sbjct: 144 VKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFR 200

Query: 555 N---PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN 611
           +   PE     YQC A+N+  T  S+     ++  P + K  L+      EG  +T+ CN
Sbjct: 201 SGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCN 259

Query: 612 PEAA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATN--VHGM 666
           P    P P   W       I    R     NG+L  S V   D    YSC A     H +
Sbjct: 260 PPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTI 319

Query: 667 DESKG-RLIVLHGPSYYEQLP----PKITIAAHR-----NLQLRCSAHTEELLDVAYIWT 716
            +     L VL      E+ P    P+ T ++       +L L C A      D+A  W 
Sbjct: 320 QQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WY 377

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
             G   G++  ++ +  N N     L ITN S  D+GEY C+  + +G I    +V V+ 
Sbjct: 378 KKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 431

Query: 777 PP 778
            P
Sbjct: 432 AP 433



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 103/283 (36%), Gaps = 34/283 (12%)

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL   C A GVP    +W++ G  L S+    E+ ++     NV        E D   Y 
Sbjct: 359 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 411

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A N++ +   +  +RV    P +   P       GE G   + C     PKP   W  
Sbjct: 412 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 468

Query: 625 DGN--IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +G    +      +      ++          +Y C  +N HG   +   + VL      
Sbjct: 469 NGEPLQLAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 522

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 734
             +PP++   + RN  +R   +    LD  +         W  NG +  N+D        
Sbjct: 523 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 576

Query: 735 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
              + G LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 577 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 617


>gi|348537072|ref|XP_003456019.1| PREDICTED: protein sidekick-1-like [Oreochromis niloticus]
          Length = 2128

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 177/736 (24%), Positives = 296/736 (40%), Gaps = 72/736 (9%)

Query: 210 NDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDR 269
           N + L+C AGG     Y W   +       +N+ D     R ++           +  D 
Sbjct: 27  NRLMLTCLAGGSWPLQYRWTLNN-------SNITDWTPQYRLSMPS--------LKRTDA 71

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP--TNYPGVN 327
           G Y C   N+ G++I    ++   F+G F+ +   +   Q  G+A   +PP   ++P   
Sbjct: 72  GLYQCMVRNRMGAVIHRRTEVQVAFLGNFSAEEQRKTVTQ--GRAALINPPPLASFPQPL 129

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
             W +D   + +  + R+ ++ D  L   A    DAG Y     ++++      P   L 
Sbjct: 130 VTWYKDG--HKIIPNNRITITLDNQLVVLATAATDAGRYHVEAVNELTGETVTSPAVYLS 187

Query: 388 VFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSY--NWTRRGSPLPRNAY 445
           +   S+  +   P            AG++  LEC+A   PV     +W R G  L     
Sbjct: 188 ISGESDPSEPVVPAIVIGPKDTTVVAGNEAILECIANARPVDRLLVSWKRDGRRL----- 242

Query: 446 FENFNRILTIPNVKVEDQGEYICRASNDRSA---LESSVTISIQAEPNFTIPLTDK---H 499
             +  + L IP     D G Y+C AS   S    +E+   +++   P+ T     K    
Sbjct: 243 --SSGQRLIIPAPTSSDTGLYVCEASFSNSTAKPVEAKAHLTVMEPPSLTAQPKSKIFGE 300

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED--QDRYFIQD-NVLTIRYLNP 556
           +D  A++   C A GVP     W++       +T+PL      RY +   N LT+R + P
Sbjct: 301 LDRNAEIP--CLAAGVPQPRIEWYK-------DTVPLSKLANPRYKVSAANGLTVRRVQP 351

Query: 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 616
             D  ++QC A+N      +  QL V ++ P+F   P  S+    +G      C    AP
Sbjct: 352 G-DGGIFQCFARNPAGEAQAQTQLFVSSVAPTFASPP--SDQTVTDGNTALFTCQTNGAP 408

Query: 617 KPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
           KP   W+K   ++ SG  +     + ++G L + PVS  DSG Y+C A+N  G   +   
Sbjct: 409 KPAITWRKGSQVLASGSVQVPSFTLLQSGGLQVQPVSFQDSGEYTCIASNTEGTINATAT 468

Query: 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 732
           L V +  +     P    +       L+C A  +  + ++Y W  +G     M +     
Sbjct: 469 LTVWNR-TVISVPPTDQRVIKGTTATLKCDATHDPRISISYKWERSG-----MPVLPTSG 522

Query: 733 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVH 790
             +++  GLL I+     D G+Y C V S  G  S    + V   P  P  +  ++ +  
Sbjct: 523 GRVSVRQGLLTISQTWSGDIGDYTCTVTSQAGNDSRPARLEVIELPHSPRSLTARLNDSD 582

Query: 791 KTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 850
             S  + W        P+ +Y +    N NS W      V   EVD    +        L
Sbjct: 583 SRSVLLSWLRPFDGNSPLLYYVLELSEN-NSPW-----KVYLSEVDPAVTKVSV---GGL 633

Query: 851 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 910
            P  TY+F++ A N++G G+ S+ + +     + P   P  I   G     + + W+P P
Sbjct: 634 TPARTYQFRLCAVNQVGRGQYSAETQRLMLREEAPSAPPKNIVASGRTNQSIMVQWQPPP 693

Query: 911 REKQNAPNIYYKIFWR 926
             + N     Y + +R
Sbjct: 694 EPQLNGVLRGYVLRYR 709



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/380 (21%), Positives = 139/380 (36%), Gaps = 48/380 (12%)

Query: 414 GDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASND 473
           G+++ L C+A G     Y WT   S    N         L++P++K  D G Y C   N 
Sbjct: 26  GNRLMLTCLAGGSWPLQYRWTLNNS----NITDWTPQYRLSMPSLKRTDAGLYQCMVRNR 81

Query: 474 RSA-LESSVTISIQAEPNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELL-- 529
             A +     + +    NF+     K +   +A L         P    +W+++G  +  
Sbjct: 82  MGAVIHRRTEVQVAFLGNFSAEEQRKTVTQGRAALINPPPLASFPQPLVTWYKDGHKIIP 141

Query: 530 -NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK-- 586
            N  T+ L++Q           +       D   Y   A N+L     ++    L++   
Sbjct: 142 NNRITITLDNQ----------LVVLATAATDAGRYHVEAVNELTGETVTSPAVYLSISGE 191

Query: 587 --------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 638
                   P+    P ++   AG    +    N     +    WK+DG  + SG R    
Sbjct: 192 SDPSEPVVPAIVIGPKDTTVVAGNEAILECIANARPVDRLLVSWKRDGRRLSSGQR---- 247

Query: 639 ENGNLLISPVSRDDSGIYSCTATNVHGMD---ESKGRLIVLHGPSYYEQLPPKITIAAHR 695
               L+I   +  D+G+Y C A+  +      E+K  L V+  PS   Q   KI     R
Sbjct: 248 ----LIIPAPTSSDTGLYVCEASFSNSTAKPVEAKAHLTVMEPPSLTAQPKSKIFGELDR 303

Query: 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG-LLEITNASFADAGE 754
           N ++ C A       +   W  + V      L++L  P   +     L +      D G 
Sbjct: 304 NAEIPCLAAGVPQPRIE--WYKDTV-----PLSKLANPRYKVSAANGLTVRRVQPGDGGI 356

Query: 755 YECVVKSTVGKISTKTTVIV 774
           ++C  ++  G+   +T + V
Sbjct: 357 FQCFARNPAGEAQAQTQLFV 376



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 850  LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 909
            L P++ Y F++   N +G    S+PS    T    P   PS +         L  SW+PL
Sbjct: 1039 LTPFTQYRFRMQQVNIVGSSPMSAPSRLIQTLQAAPDTHPSDLSLLSATQTSLRFSWKPL 1098

Query: 910  PREKQNAP--NIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
               + N+    + Y++   R     E ++E +K  G    A +   + F  T+Y+V++QA
Sbjct: 1099 SESEYNSSPETVGYRLRVSRTDGQGENRNEDVKGTGATSEATLEGLNPF--TQYQVQIQA 1156

Query: 967  INDVGPGPESEV 978
             N +GPGP S+ 
Sbjct: 1157 FNSIGPGPWSQT 1168



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 31/148 (20%)

Query: 758  VVKSTVGKISTKTTVIVEGPP-----------GLPGGVQVVEVHKTSA--TIQWTDGATN 804
            ++K      S +   +  GPP           G PG    + + KTS+  TIQW++G   
Sbjct: 1769 LIKGATYTFSVQALTVNYGPPIQANITAQPVKGSPGSPMDMSITKTSSDLTIQWSEGDVG 1828

Query: 805  GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS------TYEF 858
              P+T Y I AR +    W            D +      S  +  VP        +YEF
Sbjct: 1829 EAPVTGYTIEARPSDEGVW------------DSFIKFLPPSSRSASVPLERLRSGISYEF 1876

Query: 859  KVIAGNELGYGEPSSPSPQYNTPADKPY 886
            +VIA N  GYG+PS+PS      +D+P+
Sbjct: 1877 RVIAVNSYGYGQPSAPSAALAAMSDRPF 1904



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 843  EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
            EA++E  L P++ Y+ ++ A N +G G P S +    T    P  +P  +         +
Sbjct: 1138 EATLEG-LNPFTQYQVQIQAFNSIGPG-PWSQTVAAQTAESVPSGSPVNVTAEAVSSSKI 1195

Query: 903  SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE-YGNVGIAVVRIPSEFYYTEYE 961
             + W  LP+ ++N   + YK+ + KK+     S  + E  G+V + +  +     YT Y 
Sbjct: 1196 LLMWSALPQSQKNGVILGYKVLYSKKDSEGPPSVQVAEGEGSVSLLLGALQK---YTVYV 1252

Query: 962  VKVQAINDVGPGPES 976
            ++V A   +G GP S
Sbjct: 1253 LQVLAYTRMGDGPPS 1267



 Score = 39.7 bits (91), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            Y+  + + N +G   PS+P  + +     P  AP  I         L ++W+  P E QN
Sbjct: 1573 YQIVMTSYNIIGESPPSNPV-EVSVGEAAPSVAPQSITVSAVSPSTLEVTWDTPPLETQN 1631

Query: 916  APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
                 YKI +W +  D + QSE +K    V    V + +   YT Y V + A N  G GP
Sbjct: 1632 GLIQGYKIHYWER--DQQNQSEKVKVI-FVPDTRVHLTNLSSYTSYLVTLTAFNTAGDGP 1688

Query: 975  ESE 977
             S+
Sbjct: 1689 PSD 1691


>gi|395539191|ref|XP_003771556.1| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion molecule
           [Sarcophilus harrisii]
          Length = 1306

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 221/872 (25%), Positives = 348/872 (39%), Gaps = 106/872 (12%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  +  L   L  DR Y     +  P  I R     + P D + D  +     +I
Sbjct: 20  ILFLCQL-MSALEVPL--DRKYXCFKTLVQPPTITR-----QSPKDYIIDPRE-----NI 66

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV  L +           G L+I+   + + 
Sbjct: 67  EIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPN----------SGTLVISITIEGKA 116

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++  +I     G+++          
Sbjct: 117 ETYEGVYQCTARNERGAAISNNIIIRPSRSPLWTKEKLEQITILK-GQSLVLPCRPPLGL 175

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 176 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYVCYARFNHTQTIQQKQ 234

Query: 383 FFPLKV-------------FPHSNFQQLK-FPNNFPKTFPEAPKAGDK-------VRLEC 421
              +KV                S F   K +    PK      +   K       + LEC
Sbjct: 235 PISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLSPEGRTSHKEELRENVLSLEC 294

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P PS  WT+    LP N   + NF + L I  V   D G+Y C A N    +E +
Sbjct: 295 IAEGLPTPSITWTKEDGELPINRTSYTNFRKTLNINLVSEADSGKYKCTARNPLGFVEHT 354

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           ++++++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 355 ISVTVKAAPYWITAPKNLVLSPGEDGTLICRANGNPKPKISWLTNGVPI--EMAP-DDPS 411

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS-FKKRPLESETY 599
           R    D +L       E   A+YQC A N+     ++A + VL   P       L  +  
Sbjct: 412 RKIDGDTILFSDVQ--ESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTDANLHYQVI 469

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIY 656
                   + C    +P P F W K   G+++       IF +NG L I    +D +G Y
Sbjct: 470 TDRPA--MLDCAFFGSPIPTFKWFKGTKGSVLQEN--TYIFHDNGTLEIPVAQKDSAGTY 525

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C   N  GM ++   L +   P+   + P    +     +   C    +  L     W 
Sbjct: 526 TCVVRNKLGMAKNDVHLEI-KDPTRIIKHPEYKVVQRGGKVSFECKVKHDPTLIATLTWL 584

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +   + N           +ID   L I N S  D   Y CV  +++  +S    + V  
Sbjct: 585 KDNGELPN-------DGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAVLRVVA 637

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++  + + S  + W  G  N  PIT + I    + +    W 
Sbjct: 638 PSPTPAPVYDRPNPPFDLELTSLLERSVQLSWIPGDENNSPITDFIIEYEDSLHEPGIWH 697

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + S+ V G +          + E  L P+  Y F+VIA N +G   PS  S  Y T A +
Sbjct: 698 HHSD-VPGTQ---------TTAELKLSPYVKYSFRVIAVNSIGRSLPSEVSEYYMTKAAE 747

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL     N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 748 PEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---AN 804

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           V   +V     F    Y VKVQA+NDVG  PE
Sbjct: 805 VSKYIVSGTPTF--VPYLVKVQALNDVGFAPE 834


>gi|354466537|ref|XP_003495730.1| PREDICTED: protein sidekick-2 isoform 1 [Cricetulus griseus]
          Length = 2172

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 199/819 (24%), Positives = 335/819 (40%), Gaps = 93/819 (11%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D +P  PYF  +P      L      N + L+C A G     ++W   +           
Sbjct: 22  DDVP--PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR---------- 65

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
                 RF+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +  
Sbjct: 66  ---ELTRFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEG 118

Query: 304 PEIGNQNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQI 361
            +  + + G+A     P  +++P     W RD     +    R+ ++ +  L   +    
Sbjct: 119 EKHQSVSHGEAAVIRAPRISSFPRPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAP 176

Query: 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-------PEAPKAG 414
           DAG Y   VQ+     G N    P+ +      + +  P +                   
Sbjct: 177 DAGRY--YVQAVNDKNGDNKTSQPITL----AVENVGGPADPIAPTIIIPPKNTSVVAGT 230

Query: 415 DKVRLECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA-- 470
            +V +ECVA   P+   +  W + G+ L       ++NR LTI N  + D G Y C A  
Sbjct: 231 SEVTMECVANARPLIKLHIIWRKDGALLSNG--ISDYNRRLTITNPTLSDAGYYECEAVL 288

Query: 471 -SNDRSALESSVTISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGE 527
            S+  S +     +S+   P F +   ++H+  + +  +   C A GVP  + +W+++  
Sbjct: 289 RSSSVSPVTRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAA 347

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
           L+  E L    Q      D  L I  L P+ D  M QC A N      +S  L V ++ P
Sbjct: 348 LVEVEKLTRFKQR----NDGGLQISGLLPD-DTGMLQCFAHNAAGEAQTSTYLAVTSIAP 402

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNL 643
           +  + PL+S     +G +V + C    AP+P   W+K   I+ SG     R  + E+G+L
Sbjct: 403 NITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSL 460

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LISP    D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C  
Sbjct: 461 LISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGV 519

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLEITNASFADAGEYECVVKS 761
             +  + V Y+W  +G  +       +ET P I +D  G L I+     D G Y C V S
Sbjct: 520 THDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLS 573

Query: 762 TVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 819
             G  S    + V   P  P      +  + + +  + W        P+  Y I+  +  
Sbjct: 574 AGGNDSRNAHLRVRQLPHAPEHPVATLSTMERRAINLTWAKPFDGNSPLMRY-ILEMSEN 632

Query: 820 NSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
           N+ W      ++   VD      EA+   V  LVP  +Y+F++ A N++G G+ S  + +
Sbjct: 633 NAPW-----TILLASVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTER 682

Query: 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQ 934
            + P + P   P  +   G     + I W+P P   QN     Y I +         +F+
Sbjct: 683 VSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFK 742

Query: 935 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           + T  +  N+ +  + I     +T YE++V A N  G G
Sbjct: 743 NITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLG 776



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1888

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 41/265 (15%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 947  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1003

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE-----VDRYTGRKE 843
            +   S T+Q+  G      I+ + + A+             VIG+      + + +   +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWVVEAQVG-----------VIGEGEEWLLIYQLSNEPD 1052

Query: 844  ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            A    V  L P++ Y F++   N +G   PS PS +  T    P  AP+ +         
Sbjct: 1053 ARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETS 1112

Query: 902  LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 956
            L + W PLP  + N    ++ YKI   K + ++   +TL       +   R+  E+    
Sbjct: 1113 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIED 1164

Query: 957  ---YTEYEVKVQAINDVGPGPESEV 978
               +TEY V+VQA N +G GP S+ 
Sbjct: 1165 LEEWTEYRVQVQAFNAIGSGPWSQA 1189



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R   +  W     +VS +   
Sbjct: 1402 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1460

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1461 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1568

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1569 SLYSMRNLTRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPLS 1611



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G P SP  +       P  AP  +         L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQN 1653

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  +++N TE + +TL    N     V++ +   YT Y V + A N  G 
Sbjct: 1654 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSIAAFNAAGD 1708

Query: 973  GPES 976
            GP S
Sbjct: 1709 GPRS 1712



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +T    +  V+     +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1359

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            Y       +   L P S Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1360 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1411

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY I  R+     +   +     N     V     F
Sbjct: 1412 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1469

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1092 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVMGRTRESVPSS 1201

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1260

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289


>gi|332248118|ref|XP_003273209.1| PREDICTED: neurofascin-like isoform 1 [Nomascus leucogenys]
          Length = 721

 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 169/613 (27%), Positives = 258/613 (42%), Gaps = 48/613 (7%)

Query: 185 KIPRGPYF---IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRL 238
           +IP  P     + QP  +     K  I++   +I + C A G P PS+ W +      R 
Sbjct: 128 EIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRF 183

Query: 239 VANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG-- 293
                DP    R     G L+I+     R  E  G Y C A NKFG+ +S  ++L     
Sbjct: 184 FNIAKDPRVSMR--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 241

Query: 294 -FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA 352
               + NL   P +  +     + C+PP   P    +W        + +DKRV   ++G 
Sbjct: 242 PLWPKENLD--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGD 298

Query: 353 LYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAP 411
           LYFS  + Q    +YSCN +   + T +    F LKV       +      +P+    + 
Sbjct: 299 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 358

Query: 412 KA--GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYIC 468
               G  + LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C
Sbjct: 359 MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFC 418

Query: 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
            ASN   ++  ++++ ++A P +     +  +    D    C A G P  T  W  NGE 
Sbjct: 419 LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 478

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           L S      + +R    D ++        R  A+YQC   N+     ++A + VL + P 
Sbjct: 479 LQSAP---PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPR 533

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLI 645
               P              + C    +P P   W K+G   GS   GG   ++ENG+L I
Sbjct: 534 MLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEI 590

Query: 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705
             + ++D GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    
Sbjct: 591 KMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKH 649

Query: 706 EELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
           +  L +   W  +   + IGN    E ++         L I   +  D G Y CV  + +
Sbjct: 650 DPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTEL 700

Query: 764 GKISTKTTVIVEG 776
            +   K  + V G
Sbjct: 701 DQDLAKAYLTVLG 713



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 130/326 (39%), Gaps = 35/326 (10%)

Query: 476 ALESSVTISIQAE----PNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
           A+E  +  SIQ E    P  T      H+ D + ++   CEA G P  ++ W RN    N
Sbjct: 126 AIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFN 185

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLN---PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
               P     R   +   L I + +   PE     YQC A+N+  T  S+     ++  P
Sbjct: 186 IAKDPRVSMRR---RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSP 242

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLI 645
            + K  L+      EG  +T+ CNP    P P   W       I    R     NG+L  
Sbjct: 243 LWPKENLDP-VVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYF 301

Query: 646 SPVSRDDSGI-YSCTATN--VHGMDESKG-RLIVLHGPSYYEQLP----PKITIAAHR-- 695
           S V   D    YSC A     H + +     L VL      E+ P    P+ T ++    
Sbjct: 302 SNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVL 361

Query: 696 ---NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 752
              +L L C A      D+A  W   G   G++  ++ +  N N     L ITN S  D+
Sbjct: 362 RGMDLLLECIASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDS 413

Query: 753 GEYECVVKSTVGKISTKTTVIVEGPP 778
           GEY C+  + +G I    +V V+  P
Sbjct: 414 GEYFCLASNKMGSIRHTISVRVKAAP 439



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)

Query: 505 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564
           DL   C A GVP    +W++ G  L S+    E+ ++     NV        E D   Y 
Sbjct: 365 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 417

Query: 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 624
           C A N++ +   +  +RV    P +   P       GE G   + C     PKP   W  
Sbjct: 418 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 474

Query: 625 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
           +G  + S      +      ++          +Y C  +N HG   +   + VL      
Sbjct: 475 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 528

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 734
             +PP++   + RN  +R   +    LD  +         W  NG +  N+D        
Sbjct: 529 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 582

Query: 735 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
              + G LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 583 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 623


>gi|45383896|ref|NP_989436.1| protein sidekick-1 precursor [Gallus gallus]
 gi|82242600|sp|Q8AV58.1|SDK1_CHICK RecName: Full=Protein sidekick-1; Flags: Precursor
 gi|23194254|gb|AAN15075.1| sidekick-1 [Gallus gallus]
          Length = 2169

 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 197/802 (24%), Positives = 308/802 (38%), Gaps = 67/802 (8%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W   D                
Sbjct: 55  APYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWLHND---------------S 95

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEF---NLKRAPE 305
           +  T S     I    Q  D G Y C   N+ G+++    ++   ++G F   N K+   
Sbjct: 96  EITTYSSEYKYIIPALQRSDAGFYQCIVRNRMGALLQRRSEVQVAYMGNFMDANQKKTVT 155

Query: 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 365
            G       M      +YP     W RD   + +    R+ ++ +  L   A    DAG 
Sbjct: 156 EGEAAVLNFMHI---FSYPRPQVTWFRD--GHKIIPSSRIAITLENQLVILATSVADAGG 210

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAF 424
           Y     ++ +   +  P   L +   ++      P    P           +V LECVA 
Sbjct: 211 YYAQAVNEKNGENKTSPLIHLSIASATDPSDPTAPIIVIPPQNKSVVVGTSEVTLECVAS 270

Query: 425 GYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---S 479
             PV   S  W R G  +   +   +F R LTI N    D G Y C A    S  E   +
Sbjct: 271 ARPVERLSIMWKRNGIKI--TSGISSFGRRLTITNPTSADVGMYFCEAKLRDSTEEPARA 328

Query: 480 SVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538
              IS+   P FT  P      + + D+   C+A GVP  +  W+++   L+     L++
Sbjct: 329 KAFISLMVPPYFTAEPEGVILAEVEKDVDILCQAMGVPIPSLVWYKDSVPLSK----LQN 384

Query: 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 598
                +    L I  L P+ D  ++QC A N+     +   L V  +KP+F + P   +T
Sbjct: 385 PRYKVLLSGGLRIHALRPQ-DAGIFQCFASNKAGEIQTYTYLDVTNIKPAFIQPP--EDT 441

Query: 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSG 654
              EG    + C    APKP   WKK   I+ SG     R  + E+G L I+PV   D+G
Sbjct: 442 TVTEGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRFVLLESGGLQITPVFLQDAG 501

Query: 655 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 714
            Y+C A N  G   +   L V +  ++    P   T+       LRC A  +  + + Y+
Sbjct: 502 NYTCHAVNSEGALNAFVMLTVWNR-TFIVHPPENSTVIKGTTATLRCEATHDPRISIRYV 560

Query: 715 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
           W  + V I     + +    +  DG LL I+     D G+Y C V S  G  S    + V
Sbjct: 561 WKKDSVVINPSSSSRI---TVEKDGTLL-ISQTWSGDIGDYTCEVISFGGNDSRMARLEV 616

Query: 775 EGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
              P  P  +       +  S  + W        P+ +Y +    N NS W         
Sbjct: 617 IELPHSPQNLLATLNSSYSRSVVLSWVRPFDGNSPVLYYMVELSEN-NSPW--------K 667

Query: 833 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
             +     +  +   + L P  TY+F+V A N++G G+ SS + +   P + P   P  I
Sbjct: 668 VHLSNLDPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNI 727

Query: 893 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRI 951
              G     + + W+P P  + N     Y + +R      E+Q    K   +  I    +
Sbjct: 728 VASGRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLV 784

Query: 952 PSEFYYTEYEVKVQAINDVGPG 973
                +T+YE++V + N  G G
Sbjct: 785 TDLIIWTQYEIQVASYNGAGLG 806



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  + V +   +  T+QWT+G +  +P T Y I AR +    W      +  K+
Sbjct: 1852 EGSPGSPHEILVTK-SASGLTVQWTEGDSGEKPTTGYIIEARPSDEGLW-----DMFVKD 1905

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A NE GYGEPS PS   +   + P+
Sbjct: 1906 IPRSATSYTVSLDK-LKQGVTYEFRVVAVNEFGYGEPSVPSVAVSAQTEAPF 1956



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 91/218 (41%), Gaps = 15/218 (6%)

Query: 768  TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            T +T+    PP LPG    + +  +   SAT+Q+  G      I  + +  +        
Sbjct: 1009 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSICKWIVEGQVG---VLG 1065

Query: 825  NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               E V   EVD     +   + N L P++ Y F++   N +G    S PS    T    
Sbjct: 1066 EEEEWVSLHEVDNEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAP 1124

Query: 885  PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ-SETLKE 940
            P  AP  +         L + W PLP  + N    ++ Y+I FWR     + Q S  LK 
Sbjct: 1125 PDVAPGSVSVRTASESSLRMRWVPLPDTQYNGNPESVGYRIKFWR----VDLQPSALLKV 1180

Query: 941  YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
              +       I     +TEYE+++QA N +G GP +EV
Sbjct: 1181 ISDRLERECTIQDLEEWTEYELQIQAFNAIGAGPWNEV 1218



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 25/253 (9%)

Query: 738  DGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVI--VEGPPGL-PGGVQVVEVHKT 792
            D  +LE+ N +      +     + VG   +S  + VI  ++ PP + PG V V    ++
Sbjct: 1081 DAQMLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPGSVSVRTASES 1140

Query: 793  SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            S  ++W    D   NG P +  Y+I   R +   +       VI   ++R     E +I+
Sbjct: 1141 SLRMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSAL---LKVISDRLER-----ECTIQ 1192

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
            + L  W+ YE ++ A N +G G P +      T    P   P  +         + ++W 
Sbjct: 1193 D-LEEWTEYELQIQAFNAIGAG-PWNEVVGVRTRESVPSAPPENVSAEAVSSTQILLTWS 1250

Query: 908  PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
             +P  +QN   + YKI ++ K+ D+E +S+T++  GN   + + +     Y  YE++V A
Sbjct: 1251 AVPESEQNGLILGYKILYKAKDLDSEPRSQTVR--GNHTQSCL-LSGLRKYVLYEIRVLA 1307

Query: 967  INDVGPG-PESEV 978
               +G G P S V
Sbjct: 1308 FTRIGDGVPSSPV 1320



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 28/209 (13%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            +V   S  + W  G+    PI ++ +  R   N  W   S  +        +    + I 
Sbjct: 1441 DVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSI--------SHEATSCII 1492

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
              L P+++Y+ +V A N++G  + S+ +    T  D P + PS +         + + W+
Sbjct: 1493 ESLNPFTSYKLRVKATNDIGDSDYSAETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQ 1552

Query: 908  PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEY------GNVGIA 947
            P   E  N   + Y+I++R+              KN +  ++E   +        +  + 
Sbjct: 1553 PPKAESLNGLLLGYRIYYRELDYDAGSATESKAVKNPSALRAELTPQSSFKTVNSSSALT 1612

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPES 976
               +     Y  YEV + A N +G  P S
Sbjct: 1613 TYELTQLKKYKRYEVLMTAYNVIGESPTS 1641


>gi|296203082|ref|XP_002806914.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Callithrix
           jacchus]
          Length = 2108

 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 197/807 (24%), Positives = 328/807 (40%), Gaps = 78/807 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 45  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 87

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 88  KFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 143

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y 
Sbjct: 144 SHGEAAVIRAPRIASFPRPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY- 200

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKTFPEAPKAGDKVRLECVA 423
             VQ+     G N    P+ +    +       +      P           +V LECVA
Sbjct: 201 -YVQAVNDKNGDNKTSQPITLAVERDVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVA 259

Query: 424 FGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSV 481
              P+   +  W + G  L  +    + NR LTIPN    D G Y C A    S++ S V
Sbjct: 260 NARPLIKLHIIWKKDGVLL--SGGISDHNRRLTIPNPTASDAGYYECEAVLRSSSVPSVV 317

Query: 482 T---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
               +S+   P F +   ++H+  + +  +   C A GVP  + SW+++  ++  E L  
Sbjct: 318 RGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSISWYKDAAVVEVEKLAR 376

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
             Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + PL+S
Sbjct: 377 FRQR----SDGGLQISGLVPD-DTGMFQCFARNSAGEVQTSTYLAVTSIAPNITRGPLDS 431

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDD 652
                +G +V + C    AP+P   W+K   I+ SG     R    E+G+LLISP    D
Sbjct: 432 TVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISD 489

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712
           +G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  + + 
Sbjct: 490 AGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIR 548

Query: 713 YIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
           Y+W  +G  +G M+ N    P I +D  G L I+     D G Y C V S  G  S    
Sbjct: 549 YVWEKDGATLG-MESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAH 603

Query: 772 VIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
           + V   P  P      +  V + +  + W        P+  Y +    N N+ W      
Sbjct: 604 LRVRQLPHAPEHPVATLSTVERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPWT----- 657

Query: 830 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889
           V+   VD    +  +     LVP  +Y+F++ A N++G G+ S  + + + P + P   P
Sbjct: 658 VLLASVD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPP 714

Query: 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGI 946
             +   G     + I W+P     QN     Y I +         +F++ T  +  N+ +
Sbjct: 715 QNVIASGRTNQSIMIQWQPPAESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLL 774

Query: 947 AVVRIPSEFYYTEYEVKVQAINDVGPG 973
             + I     +T YE++V A N  G G
Sbjct: 775 EDLII-----WTNYEIEVAAYNSAGLG 796



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 39/284 (13%)

Query: 715  WTHNGVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768
            W   G RI   + N   T      PN+ ++     +T  +       E    ++ G+   
Sbjct: 858  WHLTGYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQV 914

Query: 769  KTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NS 821
              + I  G PP LPG    + +  +   S T+Q+  G      I+ + + A+        
Sbjct: 915  SASTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGE 974

Query: 822  TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
             W  +  H +  E D     +   + + L P++ Y F++   N +G   PS PS +  T 
Sbjct: 975  EWLLI--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTL 1027

Query: 882  ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLK 939
               P  AP+ +         L + W PLP  + N    ++ YKI   K + ++   +TL 
Sbjct: 1028 QAPPDMAPANVSLPTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLS 1084

Query: 940  EYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESE 977
                  +   R+  E+       +TEY V+VQA N +G GP S+
Sbjct: 1085 H-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQ 1123



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1768 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1824

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1825 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1858



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P + QN
Sbjct: 1531 YEIRMSVYNAVGEG-PSSPPHEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1589

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  +++N TE + +TL    N     V++ +   YT Y V V A N  G 
Sbjct: 1590 GDIQGYKIYFWEAQRQNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1644

Query: 973  GPES 976
            GP S
Sbjct: 1645 GPRS 1648



 Score = 44.3 bits (103), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1027 LQAPPDMAPANVSLPTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1084

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1085 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1136

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1137 GPTNVSALATTSSSMLVRWSDVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS 1195

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPG 973
              ++     Y  YEV+V A   +G G
Sbjct: 1196 -AQLTGLGKYVLYEVQVLAFTRIGDG 1220


>gi|350590168|ref|XP_003131297.2| PREDICTED: protein sidekick-2, partial [Sus scrofa]
          Length = 2201

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 202/821 (24%), Positives = 341/821 (41%), Gaps = 91/821 (11%)

Query: 181 ENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVA 240
           E  D +P  PYF  +P      L      N + L+C A G     ++W   +        
Sbjct: 48  EAKDDVP--PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR------- 94

Query: 241 NLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNL 300
                    +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  
Sbjct: 95  ------ELTKFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF-- 144

Query: 301 KRAPEIGNQNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSAL 358
           +   +  + + G+A     P   ++P     W RD     +    R+ ++ +  L   + 
Sbjct: 145 EEGEKHQSVSHGEAAVIHAPRIASFPRPQVTWFRDG--RKIPPSSRIAITLENTLVILST 202

Query: 359 EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK------ 412
              DAG Y   VQ+     G N    P+ +      + +  P +        P       
Sbjct: 203 VAPDAGRY--YVQAVNDKNGDNKTSQPITL----AVENVGGPADPIAPTIIIPPKNTSVV 256

Query: 413 AG-DKVRLECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICR 469
           AG  +V +ECVA   P+   +  W + G+ L  +    ++NR LTIPN    D G Y C 
Sbjct: 257 AGTSEVTMECVANARPLIKLHIIWKKDGALL--SGGISDYNRRLTIPNPTGSDAGYYECE 314

Query: 470 ASNDRSALESSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFR 524
           A    S++ S V    +S+   P F +   ++H+  + +  +   C A GVP  + +W++
Sbjct: 315 AVLRSSSVPSVVRGAYLSVLEPPQF-VKEPERHITAEMEKVVDVPCRAKGVPPPSITWYK 373

Query: 525 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584
           +  ++  E L    Q      D  L I  L P+ D  M+QC A+N      +S  L V +
Sbjct: 374 DAAVVEVERLSRFRQR----GDGGLQISGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTS 428

Query: 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFEN 640
           + P+  + PL+S     +G +V + C    AP+P   W+K   I+ SG     R  + E+
Sbjct: 429 IAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLES 486

Query: 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700
           G+LLISP    D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + 
Sbjct: 487 GSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMV 545

Query: 701 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVV 759
           C    +  +   Y+W  +G  + +++ N    P + +D  G L I+     D G Y C V
Sbjct: 546 CGVTHDPRVTTRYVWEKDGTTL-SLEGN----PRLRLDKSGSLHISQTWSGDIGTYTCRV 600

Query: 760 KSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIART 817
            S  G  S    + V   P  P      +    + +  + W        P++ Y +    
Sbjct: 601 LSAGGNDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTWGKPFDGNSPLSRYILEVSE 660

Query: 818 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPS 875
           N N+ W      V+   VD      EA+   V  LVP  TY+F++ A N++G G+ S  +
Sbjct: 661 N-NAPW-----AVLLASVD-----PEATSVTVKGLVPARTYQFRLCAVNDVGKGQFSKDT 709

Query: 876 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTE 932
            + + P + P   P  +   G     + I W+P P   QN     Y I +         +
Sbjct: 710 ERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQ 769

Query: 933 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
           F++ T  +  N+ +  + I     +T YE++V A N  G G
Sbjct: 770 FKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLG 805



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P E QN
Sbjct: 1624 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1682

Query: 916  APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW  +++N TE  ++  L E G      V+I +   YT Y V V A N  G
Sbjct: 1683 GDIQGYKIYFWEAQRRNLTERVKTLFLAENG------VKIKNLTGYTAYMVSVAAFNAAG 1736

Query: 972  PGPES 976
             GP S
Sbjct: 1737 DGPRS 1741



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W  G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1861 IIARYSSAIAIHWASGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1917

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1918 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1951



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 39/263 (14%)

Query: 733  PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 785
            PN+ ++    GL  +T  +     E   +     G++S  T  I  G PP LPG    + 
Sbjct: 976  PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 1029

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 842
            +  +   S T+Q+  G      I+ + + A+         W  +  H +  E D     +
Sbjct: 1030 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLTNEPDT----R 1083

Query: 843  EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
               + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L
Sbjct: 1084 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1142

Query: 903  SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 956
             + W PLP  + N    ++ YKI   K +  +   +TL       +   R+  E+     
Sbjct: 1143 WLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH-----VVQDRVEREYTIEDL 1194

Query: 957  --YTEYEVKVQAINDVGPGPESE 977
              +TEY V+VQA N +G GP S+
Sbjct: 1195 EEWTEYRVQVQAFNAIGSGPWSQ 1217



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 87/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R      W     +VS +   
Sbjct: 1431 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNAST 1489

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1490 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPAIV 1537

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI- 951
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1538 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1597

Query: 952  ----------PSEFYYT--------EYEVKVQAINDVGPGPES 976
                      PS   Y          YE+++   N VG GP S
Sbjct: 1598 PLYSVRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1640



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +T    +  V+     +
Sbjct: 1330 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1388

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1389 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1440

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY I  R+     +   +     N    VV     F
Sbjct: 1441 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASTFVVDRLKPF 1498

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1499 --TSYKFRVKATNDIG 1512



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 18/206 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R + +    +  
Sbjct: 1121 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1178

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1179 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1230

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1231 GPTNVSALATTSSSMLVRWNEVPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS 1289

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPG 973
              ++     Y  YEV+V A   +G G
Sbjct: 1290 -AQLTGLGKYVLYEVQVLAFTRIGDG 1314


>gi|358419039|ref|XP_003584107.1| PREDICTED: protein sidekick-1 [Bos taurus]
          Length = 2114

 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 190/798 (23%), Positives = 317/798 (39%), Gaps = 61/798 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   D       + L    S+ 
Sbjct: 10  PYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWTHND-------SELTTYTSEY 58

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           ++ +           Q  D G Y C   N+ G+++    ++   ++G+F       + ++
Sbjct: 59  KYVIPS--------LQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGDFTDADERRVVSE 110

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 369
                +   P ++ P     W RD   + +    R+ ++ +  L   A    DAG Y   
Sbjct: 111 GRAAVLSLPPISSCPRPQVTWFRDG--HKIIPSSRIAITLENQLVILAAAASDAGAYYVQ 168

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAFGYPV 428
             ++ +   +  P   L +   +   +   P    P +         +  LEC+A   P 
Sbjct: 169 AVNERNGENKTSPPVHLSIARDTGMPEAVAPVIVVPPSNRSVVAGSSETTLECIANARPA 228

Query: 429 P--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVTI 483
              S  W R G  +        F R LTI N    D G YIC A+   SA E   +   +
Sbjct: 229 EELSVTWKRNGVRV--TTGLHGFGRRLTISNPTSSDTGVYICEAALPGSAFEPARARAFL 286

Query: 484 SIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           SI   P F   P +    + + ++   CEA GVP     WF++   +N     L++    
Sbjct: 287 SIIEPPYFIAEPKSRILAEVEENVDIVCEAMGVPPPALQWFKDAISINK----LQNPRYQ 342

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            +    L +R L PE D  ++QC A N      +   L V  + P+F + P+++    G 
Sbjct: 343 VLAGGGLRVRQLRPE-DSGIFQCLASNAGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGT 401

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSC 658
                + C    AP+P  VW +  +I+ SG  R     + E+G L I+PVS  D+G Y+C
Sbjct: 402 --TAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTC 459

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N  G  ++   L V +  S     P  + +       L C A  +  + + Y+W  +
Sbjct: 460 HAANSEGSLDASATLTVWNRTSIVTP-PEDLVVIKGTTATLHCGATHDPRISLRYVWKKD 518

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
            V I     + +    +  DG LL I+     D G+Y C V S  G  S    + V   P
Sbjct: 519 NVVIAPSSSSRVV---VEKDGSLL-ISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELP 574

Query: 779 GLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
             P  +   +   H  +  + W        P+ +Y I+  +  NS W  V    +G E+ 
Sbjct: 575 HSPQNLVASLNPAHSHAVVLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSDVGPEMT 632

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
             T R        L P  TY+F+V A N++G G+ S+ + +   P + P   P  I   G
Sbjct: 633 GVTVRG-------LTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASG 685

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 955
                + + W+P P  + N     Y + +R      E+Q   +    +  ++   +    
Sbjct: 686 RTNQSIMVQWQPPPEPEHNGVLRGYILRYRLAGLPGEYQQRNIS---SPEVSYCLVTELI 742

Query: 956 YYTEYEVKVQAINDVGPG 973
            +T+YE++V A N  G G
Sbjct: 743 IWTQYEIQVAAYNGAGLG 760



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+ WT+G     P T Y I AR +    W      +  K
Sbjct: 1805 AEGSPGSPRDVSVTK-STSELTLHWTEGRAGRTPTTGYVIEARPSDEGLW-----DMFAK 1858

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R       S++  L    TYEF+V+A N+ GYGEPSSPS   +   + P+
Sbjct: 1859 DIPRGATAYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 1910



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 58/130 (44%), Gaps = 19/130 (14%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G G  S+P   +   A  P QAP R+         L ++WEP P E QN
Sbjct: 1579 YEVVLTAYNVIGEGPASAPVEVFVGEA-APAQAPQRVHVNPLTASQLEVAWEPPPPESQN 1637

Query: 916  APNIYYKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
                 YKI++     +NDTE     F  ET  +  N+            +T+Y V + A 
Sbjct: 1638 GIIQGYKIYYWEADSQNDTEKMRVLFLPETTAKLKNL----------TSHTKYLVSISAF 1687

Query: 968  NDVGPGPESE 977
            N  G GP SE
Sbjct: 1688 NAAGDGPRSE 1697



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 93/228 (40%), Gaps = 39/228 (17%)

Query: 768  TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +        
Sbjct: 963  TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTAISRWIVQGQVG------ 1016

Query: 825  NVSEHVIGKEVDRYTGRKEASIENV-------LVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                  IG E +  T  +E +  +        L P++ Y F++   N +G G  S  S  
Sbjct: 1017 -----AIGDEEEWVTLCEEENEPDAQMLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRV 1071

Query: 878  YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 934
              T    P  AP+ I         L + W PLP  + N    ++ Y+I +W     +   
Sbjct: 1072 IQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVL 1131

Query: 935  SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPES 976
            ++ + +         R+  EF       +TEYE+++QA N +G GP S
Sbjct: 1132 TQVISD---------RLEREFTVEGLEEWTEYELQMQAFNAIGAGPWS 1170



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 38/225 (16%)

Query: 778  PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVI 831
            P  P  +QV   +V   S  ++W  G+    PI ++ +    + R  W +   ++S    
Sbjct: 1383 PAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEAT 1442

Query: 832  GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
               V+R            L P+++Y+ ++ A N++G  + S+ +    T  D P + P  
Sbjct: 1443 ACVVER------------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRS 1490

Query: 892  IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK--------- 939
            +         + + W+P   E  N     Y+I++R+   +     +S+TLK         
Sbjct: 1491 VSVTPRTTSSVRVQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAEL 1550

Query: 940  ----EYGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
                 +  V  +      E      Y  YEV + A N +G GP S
Sbjct: 1551 TAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPAS 1595



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 18/213 (8%)

Query: 767  STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 821
            S++    ++ PP + P  + V    +TS  ++W    D   NG P +  Y+I        
Sbjct: 1068 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRI-------K 1120

Query: 822  TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
             W       +  +V      +E ++E  L  W+ YE ++ A N +G G P S + +  T 
Sbjct: 1121 YWCPDLPSAVLTQVISDRLEREFTVEG-LEEWTEYELQMQAFNAIGAG-PWSAAVRGRTR 1178

Query: 882  ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKE 940
               P  AP  +         + ++W  +P   QN   + YKI +R K+ D E +S  ++ 
Sbjct: 1179 ESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEPRSHVVR- 1237

Query: 941  YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
             GN   + + +     +  YE++V A   +G G
Sbjct: 1238 -GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNG 1268


>gi|449667583|ref|XP_002165052.2| PREDICTED: contactin-4-like [Hydra magnipapillata]
          Length = 1330

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 217/829 (26%), Positives = 326/829 (39%), Gaps = 122/829 (14%)

Query: 212 ITLSCYAGGYPNPSYEWFKED--YVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE-- 267
           + L C A G P P  EW   +  +V  +    + +  +  R T+ GG L I + +     
Sbjct: 62  LKLECTASGNPVPKIEWSFNNVKFVPGQPFNGIEN--APIRHTIQGGKLTITNIKGKSEF 119

Query: 268 -----DRGSYHCKASNKFGSIISE---SVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDP 319
                D G Y C A+N+ G++ +E   +V++   F   F  +  P       G+      
Sbjct: 120 DNNNYDTGRYRCIATNEIGTVFAEIFINVRVMGVFSPGFQFENEPTKHRPVIGQKFIVPC 179

Query: 320 PTNYPG--------------VNYYWARDYFPNFVEEDKRVFVSYDGALYFSAL------E 359
           P +  G              V  YW   Y P       RVF + +GAL FS +      E
Sbjct: 180 PNHKKGYGTTIRWGTVSNERVIDYWLPGYNP-------RVFQTSNGALVFSVVLEDDIKE 232

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV-R 418
             ++G   C + +       N          + N Q+ + P       P+     +    
Sbjct: 233 SRNSGGPRCILMNYGLTRFSNQQVL---YESYDNKQETRKPELLALLDPQMIAPIESTYS 289

Query: 419 LECVAFGYPVPSYNWTRRG------SPLPRNAYFENF----NRI-LTIPNVKVEDQGEYI 467
           + C A G+PVP+Y W  +G       P      FE F    NR+ L I  V     G + 
Sbjct: 290 MICGALGFPVPTYRWEYQGVELVPLRPGGNELNFEFFEFLPNRLELRIRRVTQYSGGTFK 349

Query: 468 CRASNDRSALESSVTISIQAEPNFTIPLTDK-HMDNQADLTWTCEAFGVPDVTYSWFRNG 526
           C ASN    + +   +S+   P F I   D+ ++  +      C A G P   + W+ N 
Sbjct: 350 CYASNSLGEIWTIGQLSVAFPPVFNIFFPDEINVPFENAFEIRCNASGFPVPKFEWYHN- 408

Query: 527 ELLNSETLPLEDQDRYFI-----QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581
               S  L ++D  R +      Q +VL+   +    D  +Y C A N   T   S  ++
Sbjct: 409 ----STQLSVKDARRSWTENTDNQGSVLSFTKM-AFSDNGIYICIAINSQDTITQSTFIK 463

Query: 582 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641
           V  + P F+  P+E   Y     ++ I C+P A P P F W KD  +I  GGR  ++ NG
Sbjct: 464 VRAMAPLFEI-PVEDPIYLFRTADMMIHCSPSAGPIPTFTWSKDNVVIADGGRYTVYSNG 522

Query: 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR----NL 697
            LLI  V   DSG+Y C+A N  G  ES+G  IVL  P+     P       H+     +
Sbjct: 523 TLLIKGVLATDSGLYKCSAENPLGKAESQGTAIVLE-PTVITHPP---ISQGHQIGFYGI 578

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
           QL C A  +  L++   W   GVR+   D              +L I N +  DAG Y C
Sbjct: 579 QLFCGASWDTRLELRIEWYKGGVRMAKFDDRIYIEKRSAGPPRILYINNLTIDDAGNYSC 638

Query: 758 VVKSTVGKISTKTT----VIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGRPITHYK 812
              + VG + ++ T    + V GPP  P GV+V        A IQWT G   G     + 
Sbjct: 639 HAFTKVGNVVSEQTAFAILTVRGPPQPPAGVRVTGNCGNYDALIQWTRGEELGAETRGFS 698

Query: 813 IIARTN---WNSTWFNVSEHVIGKEVDRYTGRKEASIENVL---VPWSTYEFKVIAGNEL 866
           +   TN    N  W              Y G  +    N L    P +   FK+   N +
Sbjct: 699 VEFSTNVTAANGIW--------------YGGIGDFLNPNQLYHAYPGTRISFKLTRENLV 744

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI-GDLSISWEPLPREKQNAPNIYYKIFW 925
                  P+P  N         P  + G    + G L ISW  +      AP+ +Y++ +
Sbjct: 745 -------PAPPMN---------PLNVTGITKMMPGVLFISWTAITDVYYGAPDFFYEVGF 788

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974
           R      F   T+ +  ++ +   +IP+     EYE  VQ+ N +G GP
Sbjct: 789 RLVGAPSF---TVNQIRDLNVTEFQIPTPGINKEYEFYVQSKNSLGEGP 834



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 29/179 (16%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD-KRFTL-SGGNLIINDPRQVED 268
           D+ + C     P P++ W K++ V           ++D  R+T+ S G L+I       D
Sbjct: 486 DMMIHCSPSAGPIPTFTWSKDNVV-----------IADGGRYTVYSNGTLLIKG-VLATD 533

Query: 269 RGSYHCKASNKFGSIISESVQLAF--GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-- 324
            G Y C A N  G   S+   +      I    + +  +IG   +G  +FC    +    
Sbjct: 534 SGLYKCSAENPLGKAESQGTAIVLEPTVITHPPISQGHQIG--FYGIQLFCGASWDTRLE 591

Query: 325 -GVNYYWARDYFPNFVEEDKRVFVSYDGA-----LYFSALEQIDAGNYSCNVQSKVSDT 377
             + +Y        F   D R+++    A     LY + L   DAGNYSC+  +KV + 
Sbjct: 592 LRIEWYKGGVRMAKF---DDRIYIEKRSAGPPRILYINNLTIDDAGNYSCHAFTKVGNV 647


>gi|444727882|gb|ELW68360.1| Protein sidekick-2 [Tupaia chinensis]
          Length = 2167

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 198/812 (24%), Positives = 333/812 (41%), Gaps = 91/812 (11%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +    R     +    D+
Sbjct: 26  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNRELTRFSLEYMITSLDR 81

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
                               G Y C   N+ G+++    ++   ++G F  +   +  + 
Sbjct: 82  THA-----------------GFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSV 122

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W R+     +    R+ ++ +  L   +    DAG Y 
Sbjct: 123 SHGEAAVIRAPRIASFPRPQVTWFREG--RKIPPSSRIAITLENPLVILSTVAPDAGRY- 179

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK------AG-DKVRLE 420
             VQ+     G N    P+ +      + +  P +        P       AG  +V +E
Sbjct: 180 -YVQAVNDKNGDNKTSQPITL----AVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTME 234

Query: 421 CVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           CVA   P+   +  W + G+ +  +    +FNR LTIPN    D G Y C A    S++ 
Sbjct: 235 CVANARPLIKLHIVWKKDGALV--SGGMSDFNRRLTIPNPTSSDAGYYECEAVLRSSSVA 292

Query: 479 SSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSET 533
             V    +S+   P F +   ++H+  + +  +   C A GVP  + +W+++  ++  E 
Sbjct: 293 PVVRGAYLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAVVEVEK 351

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L    Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + P
Sbjct: 352 LTRFRQR----GDGGLQISGLVPD-DTGMFQCFARNTAGEVQTSTYLAVTSIAPNITRGP 406

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVS 649
           L+S     +G +V + C    AP+P   W+K   I+ SG     R  + E+G+LL+SP  
Sbjct: 407 LDSTVI--DGMSVVLVCETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPTH 464

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C ATN  G+DE+   L+V    +   + P    +       + C A  +  +
Sbjct: 465 ISDAGTYTCLATNSRGVDEASADLVVW-ARTRITRPPQDQNVIKGTQASMVCGATHDPRV 523

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 768
            V Y+W  +G  +G +D N    P I +D  G L I+     D G Y C V S  G  S 
Sbjct: 524 TVRYVWEKDGATLG-VDSN----PRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSR 578

Query: 769 KTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
              + V   P  P      +    + +  + W        P+  Y I+  +  N+ W   
Sbjct: 579 SAHLRVRQLPHAPEHPVATLSTTERRAINLTWAKPFDGNSPLIRY-ILEMSENNAPW--- 634

Query: 827 SEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
              V+   VD      EA+   V  LVP  +Y+F++ A N++G G+ S  + + + P + 
Sbjct: 635 --TVLLASVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEP 687

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEY 941
           P   P  +   G     + I W+P P   QN     Y I +         +F++ T  + 
Sbjct: 688 PTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDADV 747

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            N+ +  + I     +T YE++V A N  G G
Sbjct: 748 NNLLLEDLII-----WTNYEIEVAAYNGAGLG 774



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P + QN
Sbjct: 1591 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLDSQN 1649

Query: 916  APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW  +++N TE  ++  L E G      V++ +   YT Y V V A N  G
Sbjct: 1650 GDIQGYKIYFWEAQRRNLTERVKTLFLAENG------VKLKNLTGYTAYMVSVAAFNAAG 1703

Query: 972  PGPES 976
             GP S
Sbjct: 1704 DGPRS 1708



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 108/260 (41%), Gaps = 33/260 (12%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 945  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1001

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+         W  +  H +  E D     +   
Sbjct: 1002 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVIGEGEEWLLI--HQLANEPDA----RSME 1055

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1056 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1114

Query: 906  WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 957
            W PLP  + N    ++ YKI   K + ++   +TL       +   R+  E+       +
Sbjct: 1115 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEW 1166

Query: 958  TEYEVKVQAINDVGPGPESE 977
            TEY V+VQA N +G GP S+
Sbjct: 1167 TEYRVQVQAFNAIGSGPWSQ 1186



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1828 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1884

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1885 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1918



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1090 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1147

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1148 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1199

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P    N   + YK+ +R+K D++ Q       GN   +
Sbjct: 1200 GPANVSALATTSSSMLVRWSEVPEADHNGLVLGYKVMYREK-DSDSQPRFWLVEGNSSRS 1258

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1259 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1287



 Score = 39.7 bits (91), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 84/219 (38%), Gaps = 38/219 (17%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
            PP  P  VQ  +V   S  + W  G+    P+ +Y +  R           E   G+   
Sbjct: 1408 PPSKPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTVQTR-----------ELPSGR--- 1452

Query: 837  RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
               GR  AS    L P+++Y+F+V A N++G  E S  S    T    P  AP  +    
Sbjct: 1453 --GGRHPAS--GRLKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDDAPIILSVTP 1508

Query: 897  GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 956
                 + I W+P   +K N   + ++I +R+      +  TL+   N G     + S + 
Sbjct: 1509 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSMYS 1568

Query: 957  -------------------YTEYEVKVQAINDVGPGPES 976
                               +  YE+++   N VG GP S
Sbjct: 1569 IRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1607


>gi|301616394|ref|XP_002937635.1| PREDICTED: protein sidekick-2-like [Xenopus (Silurana) tropicalis]
          Length = 2174

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 192/814 (23%), Positives = 325/814 (39%), Gaps = 83/814 (10%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D +P  PYF  +P      L      N + L+C A G     ++W +             
Sbjct: 25  DDVP--PYFKTEPVRSQVHLEG----NRLVLTCMAEGSWPLEFKWLR------------- 65

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           D     +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F     
Sbjct: 66  DHKELTKFSLEYRYMITSLDRT--HAGYYCCIVRNRMGALLQRKTEVQVAYMGNF----- 118

Query: 304 PEIGNQNW----GKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSA 357
            E G+ +     G A   + P   ++P     W RD     +    R+ ++ +  L   +
Sbjct: 119 -EDGDTSLSVSHGDAAVINAPNIASFPQPQVTWFRDG--RKIPPTNRIAITKNNTLVILS 175

Query: 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS---NFQQLKFPNNFPKTFPEAPKAG 414
               D G Y   VQ+     G N    P+ +   +       +      P          
Sbjct: 176 SVAPDTGRYY--VQAVNDKNGDNKTSQPITLTVENVGGPADPIAPIIIIPPQNTSVVTGT 233

Query: 415 DKVRLECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASN 472
            +V +ECVA   P+   N  W + G PL  N   E F R LTI N  + D G Y C A+ 
Sbjct: 234 SEVSMECVANARPLTKLNIVWKKNGVPL-SNGVTE-FGRFLTILNPVLSDAGYYSCEATL 291

Query: 473 DRSAL---ESSVTISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGE 527
             S++    +   +++   P F +   D+H+  + +  +   C+A GVP    SW+++  
Sbjct: 292 RSSSVPPVSAGAYLTVLEPPQF-VKEPDRHLTAEMEKVVEIPCQAKGVPQPIISWYKDAV 350

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
           L++       D     +    L I  L P+ D  M+QC A+N+     +S  L V ++ P
Sbjct: 351 LIDIR----RDARFRLVSSGSLRISGLIPD-DTGMFQCFARNEAGEVQTSTYLAVTSIAP 405

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNL 643
           +  + P   +T   +G  V + C    AP+P   W+K   ++ SG     R  + E+G+L
Sbjct: 406 NITRAP--QDTTVIDGTAVVLQCETSGAPRPAITWQKGDRVLASGSIQLPRFTLLESGSL 463

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LISP    D+G Y+C+ATN  G D++   +IV    +     P   ++       + C  
Sbjct: 464 LISPAHISDTGTYTCSATNSRGADDASADIIVW-ARTRITNPPSDQSVIKGTKASMSCGV 522

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKST 762
             +  + + Y+W  +G  +   +     +P I +D  G L I+     D G Y C V S 
Sbjct: 523 SHDSSVAIRYVWEKDGFPVSVEN-----SPRIQLDKNGTLHISQTWSGDIGTYTCRVLSV 577

Query: 763 VGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
            G  S    + V   P  P      +  V   +  + W        P+  Y +    N N
Sbjct: 578 GGNDSRSAHLRVRQLPHAPENPVATLSLVESRAINLTWVKPFDGNSPLLRYIVEVSEN-N 636

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
           + W      ++   +D     + A +   LVP  +Y+F++ A N++G G+ S  + + + 
Sbjct: 637 APW-----TILLGSLD---PEQTALVVRNLVPARSYQFRLCAANDVGKGQFSKDTQRVSL 688

Query: 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLK 939
           P + P   P  +   G     + I W+P P   QN     Y + +        +Q   L 
Sbjct: 689 PEEPPSAPPQNVMASGRTNQSIMIQWQPAPENHQNGILKGYVVRYCLSGLPVGYQYRNLS 748

Query: 940 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
              N  I  + +     +T YE++V A N  G G
Sbjct: 749 ---NPSINHLLLEDLIIWTNYEIEVAAFNSAGVG 779



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 787  VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            +  + ++ TI W+ G     PIT Y I AR +    W ++    I KE   YT   +   
Sbjct: 1836 ISRYSSAITIHWSSGDPGKSPITRYIIEARPSDEGLW-DILIKDIPKEATSYTFSIDILK 1894

Query: 847  ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + V     +Y+F+VIA N+ GYG PS+PSP  +     P+
Sbjct: 1895 QGV-----SYDFRVIAVNDYGYGTPSAPSPSVSAQKANPF 1929



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 55/126 (43%), Gaps = 11/126 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE +V   N  G G  S P   +   A  P   P  I         L ++WEP P E QN
Sbjct: 1598 YEIRVSMYNAAGEGPSSIPQEVFVGEA-VPTAPPQNIAIASTTAVQLDVTWEPPPLEAQN 1656

Query: 916  APNIYYKIFW---RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKIF+    +KN+TE  ++  L E G      V++ +   YT Y + V A N  G
Sbjct: 1657 GDIQGYKIFYWEILRKNETEKVRTLFLPETG------VKLKNLTGYTTYLISVAAFNAAG 1710

Query: 972  PGPESE 977
             GP  +
Sbjct: 1711 DGPRGQ 1716



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 18/225 (8%)

Query: 758  VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYK 812
            +V ++   + ++    ++ PP + P    +    +TS  ++W    +   NG P +  YK
Sbjct: 1079 IVGTSPPSLPSRRIQTLQAPPSMFPANETLRTASQTSLWVRWVPLPEMEYNGNPDSVGYK 1138

Query: 813  I-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871
            I  AR +     F    HVI   ++R     E +IE+ L  W+ Y  ++ A N +G G P
Sbjct: 1139 IRYARLDKKGKPFT---HVIYDRIER-----EYTIED-LEEWTEYAVQIQAFNAIGAG-P 1188

Query: 872  SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931
             SP     T    P   P+ +         + + W  +P  ++N   + YK+ +++K D+
Sbjct: 1189 WSPVITARTRESVPSSGPTNVSALATTSSSILVRWSEIPEPERNGLILGYKVLYKEK-DS 1247

Query: 932  EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
            +  +      GN   +  ++     Y  YE++V A   +G G  S
Sbjct: 1248 DTSTHFWLVEGNSSRS-AQLSGLGKYVLYEIQVLAFTRIGDGAAS 1291



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIG 832
            PP  P  +Q  +V   +  + W  G+    P+ +Y I    + +  W      +S +   
Sbjct: 1405 PPSKPTVLQE-DVKARTVLLSWDPGSDGLSPVRYYTIQTLELPKGKWVVHSATISHNSTS 1463

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1464 AVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESEALTTLQAAPGEAPTIL 1511

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+    ++ N   + + I +R+      +S T++   N G     + 
Sbjct: 1512 SVNPHTTTSVLIRWQAPAEDRINGILLGFCIRFRELAYDGLRSFTMQSINNPGAKWAELT 1571

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            + +                    +  YE++V   N  G GP S
Sbjct: 1572 ASYMMRNLSEPTLTQYELDNLNKHKRYEIRVSMYNAAGEGPSS 1614



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 19/230 (8%)

Query: 754  EYECVVKSTVGKISTKTTVIVEGP----PGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 809
            E + +  + +G  +  T  I+E      PG P G+   EV  TS  + W   A     I 
Sbjct: 1276 EIQVLAFTRIGDGAASTPAILERTLDDVPGPPVGILFPEVRTTSVRLIWQPPAAPNGIIL 1335

Query: 810  HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 869
             Y+I  R N  +     +  V+   V +YT          L P S Y F++ A    G+G
Sbjct: 1336 AYQITHRLNATNA-NTATVEVLNPSVRQYTA-------TALRPESIYLFRITAQTRKGWG 1387

Query: 870  EPSSPSPQYNTPADKPYQAPSR--IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
            E +          D+P Q PS+  +     K   + +SW+  P     +P  YY I   +
Sbjct: 1388 EAAEALVVTTEKRDRP-QPPSKPTVLQEDVKARTVLLSWD--PGSDGLSPVRYYTIQTLE 1444

Query: 928  KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
                ++   +     N   AVV     F  T Y+ +V+A ND+G    SE
Sbjct: 1445 LPKGKWVVHSATISHNSTSAVVDRLKPF--TSYKFRVKATNDIGDSEYSE 1492



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 41/283 (14%)

Query: 718  NGVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKIST 768
             G +I   + N+  T      PN+ ++    GL  +T  +   AG     + S    + +
Sbjct: 929  TGYKISWEEFNQTNTRVTHYLPNVTLEYRVTGLTSLTTYTIQVAG-----MTSKGQGVVS 983

Query: 769  KTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 825
             +T+    PP LPG    + +  +   S T+Q+  G      I+ + + A+   N T   
Sbjct: 984  SSTISSGVPPELPGAPSNLGISNIGSRSVTLQFRPGFDGKTSISKWLVEAQVG-NPT--E 1040

Query: 826  VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 885
              + V+  ++      +   +   L P++ Y F++   N +G   PS PS +  T    P
Sbjct: 1041 SDDWVLIYQLANEPNARSLGVSG-LRPYNYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPP 1099

Query: 886  YQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGN 943
               P+           L + W PLP  + N    ++ YKI + +          L + G 
Sbjct: 1100 SMFPANETLRTASQTSLWVRWVPLPEMEYNGNPDSVGYKIRYAR----------LDKKGK 1149

Query: 944  VGIAVV--RIPSEFY------YTEYEVKVQAINDVGPGPESEV 978
                V+  RI  E+       +TEY V++QA N +G GP S V
Sbjct: 1150 PFTHVIYDRIEREYTIEDLEEWTEYAVQIQAFNAIGAGPWSPV 1192


>gi|68534652|gb|AAH98401.1| NRCAM protein [Homo sapiens]
          Length = 771

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 197/779 (25%), Positives = 317/779 (40%), Gaps = 83/779 (10%)

Query: 180 IENPDKIPRGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKE----DYV 234
           +E P  + + P   +Q P D + D  +     +I + C A G P PS+ W +     D  
Sbjct: 30  LEVPLDLVQPPTITQQSPKDYIIDPRE-----NIVIQCEAKGKPPPSFSWTRNGTHFDID 84

Query: 235 QDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLA 291
           +D LV                G LIIN   + +     G Y C A N+ G+ +S ++ + 
Sbjct: 85  KDPLVT----------MKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR 134

Query: 292 FGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349
                 +  ++   I  Q+ G+++   C PP   P    +W  + F   + + +RV    
Sbjct: 135 PSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGLPPPIIFWMDNSF-QRLPQSERVSQGL 192

Query: 350 DGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV-------------FPHSNFQ 395
           +G LYFS  L +    +Y C  +   + T +      +KV                + F 
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFY 252

Query: 396 QLKFPNNFPKTF--PEAPKA------GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYF 446
             K     P TF  PE   +      G+ + LEC+A G P P   W +    LP+N   +
Sbjct: 253 GAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVY 312

Query: 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADL 506
           +NF + L I +V   D G Y C A N   A+  ++++ ++A P +     +  +    D 
Sbjct: 313 KNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDG 372

Query: 507 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 565
           T  C A G P    SW  NG  +  E  P +D  R    D   TI + N  ER  A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 426

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625
            A N+     ++A + VL   P     P  +           + C    +P P   W K 
Sbjct: 427 NASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWFKG 485

Query: 626 GNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 682
               GS     I+   ENG L I    +D +G Y+C A N  GM +++  L +       
Sbjct: 486 AK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDATWIV 543

Query: 683 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742
           +Q P    +     +   C    +  L +  +W  +     N +L   E     +D   L
Sbjct: 544 KQ-PEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKDHL 595

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 802
            + + S  D+G Y CV  +T+  +S    + V   P  P  +++ +    S  + WT G 
Sbjct: 596 VVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTPGD 655

Query: 803 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 860
            N  PIT + I      +    W + +E              + + +  L P+  Y F+V
Sbjct: 656 DNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSFRV 705

Query: 861 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919
           +A N +G   PS  S QY T A +P + P+ + G G +  +L I+W+PL   + N P +
Sbjct: 706 MAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGL 764


>gi|193783619|dbj|BAG53530.1| unnamed protein product [Homo sapiens]
          Length = 591

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 165/602 (27%), Positives = 254/602 (42%), Gaps = 45/602 (7%)

Query: 193 IKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           + QP  +    +K  I++   +I + C A G P PS+ W +      R      DP    
Sbjct: 9   LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPRVSM 64

Query: 250 RFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNLKRA 303
           R     G L+I+     R  E  G Y C A NKFG+ +S  ++L         + NL   
Sbjct: 65  R--RRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLD-- 120

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQID 362
           P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + Q  
Sbjct: 121 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVMLQDM 179

Query: 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKVRLE 420
             +YSCN +   + T +    F LKV       +      +P+    +     G  + LE
Sbjct: 180 QTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLE 239

Query: 421 CVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           C+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   ++  
Sbjct: 240 CIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRH 299

Query: 480 SVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ 539
           ++++ ++A P +     +  +    D    C A G P  T  W  NGE L S      + 
Sbjct: 300 TISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP---PNP 356

Query: 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           +R    D ++        R  A+YQC   N+     ++A + VL + P     P      
Sbjct: 357 NREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRHQLIR 413

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D GIY
Sbjct: 414 VILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIY 471

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C ATN+ G  E++ RL V   P+   ++P          + L C    +  L +   W 
Sbjct: 472 TCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVARRGTTVHLECRVKHDPSLKLTVSWL 530

Query: 717 HNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
            +   + IGN    E ++         L I   +  D G Y CV  + + +   K  + V
Sbjct: 531 KDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTV 581

Query: 775 EG 776
            G
Sbjct: 582 LG 583



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 127/321 (39%), Gaps = 31/321 (9%)

Query: 477 LESSVTISIQAEPNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP 535
           ++ S+   +   P  T      H+ D + ++   CEA G P  ++ W RN    N    P
Sbjct: 1   MDPSIQNELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDP 60

Query: 536 LEDQDRYFIQDNVLTIRYLN---PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 592
                R   +   L I + +   PE     YQC A+N+  T  S+     ++  P + K 
Sbjct: 61  RVSMRR---RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKE 117

Query: 593 PLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSR 650
            L+      EG  +T+ CNP    P P   W       I    R     NG+L  S V  
Sbjct: 118 NLDP-VVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVML 176

Query: 651 DDSGI-YSCTATN--VHGMDESKG-RLIVLHGPSYYEQLP----PKITIAAHR-----NL 697
            D    YSC A     H + +     L VL      E+ P    P+ T ++       +L
Sbjct: 177 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDL 236

Query: 698 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 757
            L C A      D+A  W   G   G++  ++ +  N N     L ITN S  D+GEY C
Sbjct: 237 LLECIASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFC 288

Query: 758 VVKSTVGKISTKTTVIVEGPP 778
           +  + +G I    +V V+  P
Sbjct: 289 LASNKMGSIRHTISVRVKAAP 309



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 144/397 (36%), Gaps = 51/397 (12%)

Query: 408 PEAPKAGDKVRLEC-VAFGYPVPSYNWTRRG-SPLPRNAYF-ENFNRILTIPNVKVED-Q 463
           P   + G  + L+C    G P P   W      P+ ++    +  N  L   NV ++D Q
Sbjct: 121 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQ 180

Query: 464 GEYICRA---------SNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTC 510
            +Y C A           +   L+   T  + +  P+F  P    + + +    DL   C
Sbjct: 181 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLEC 240

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQ 570
            A GVP    +W++ G  L S+    E+ ++     NV        E D   Y C A N+
Sbjct: 241 IASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYFCLASNK 293

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 630
           + +   +  +RV    P +   P       GE G   + C     PKP   W  +G  + 
Sbjct: 294 MGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMVNGEPLQ 350

Query: 631 SG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
           S      +      ++          +Y C  +N HG   +   + VL        +PP+
Sbjct: 351 SAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL-------DVPPR 403

Query: 689 ITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPNINIDGG 740
           +    H+   +R   +    LD  +         W  NG +  N+D           + G
Sbjct: 404 MLSPRHQ--LIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV----YENG 456

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
            LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 457 SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 493


>gi|297490638|ref|XP_002698210.1| PREDICTED: protein sidekick-1 [Bos taurus]
 gi|296473045|tpg|DAA15160.1| TPA: sidekick homolog 1, cell adhesion molecule (chicken) [Bos
           taurus]
          Length = 2194

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 190/798 (23%), Positives = 317/798 (39%), Gaps = 61/798 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   D       + L    S+ 
Sbjct: 10  PYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWTHND-------SELTTYTSEY 58

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           ++ +           Q  D G Y C   N+ G+++    ++   ++G+F       + ++
Sbjct: 59  KYVIPS--------LQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGDFTDADERRVVSE 110

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 369
                +   P ++ P     W RD   + +    R+ ++ +  L   A    DAG Y   
Sbjct: 111 GRAAVLSLPPISSCPRPQVTWFRDG--HKIIPSSRIAITLENQLVILAAAASDAGAYYVQ 168

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAFGYPV 428
             ++ +   +  P   L +   +   +   P    P +         +  LEC+A   P 
Sbjct: 169 AVNERNGENKTSPPVHLSIARDTGMPEAVAPVIVVPPSNRSVVAGSSETTLECIANARPA 228

Query: 429 P--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE---SSVTI 483
              S  W R G  +        F R LTI N    D G YIC A+   SA E   +   +
Sbjct: 229 EELSVTWKRNGVRV--TTGLHGFGRRLTISNPTSSDTGVYICEAALPGSAFEPARARAFL 286

Query: 484 SIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           SI   P F   P +    + + ++   CEA GVP     WF++   +N     L++    
Sbjct: 287 SIIEPPYFIAEPKSRILAEVEENVDIVCEAMGVPPPALQWFKDAISINK----LQNPRYQ 342

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            +    L +R L PE D  ++QC A N      +   L V  + P+F + P+++    G 
Sbjct: 343 VLAGGGLRVRQLRPE-DSGIFQCLASNAGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGT 401

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSC 658
                + C    AP+P  VW +  +I+ SG  R     + E+G L I+PVS  D+G Y+C
Sbjct: 402 --TAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTC 459

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N  G  ++   L V +  S     P  + +       L C A  +  + + Y+W  +
Sbjct: 460 HAANSEGSLDASATLTVWNRTSIVTP-PEDLVVIKGTTATLHCGATHDPRISLRYVWKKD 518

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
            V I     + +    +  DG LL I+     D G+Y C V S  G  S    + V   P
Sbjct: 519 NVVIAPSSSSRVV---VEKDGSLL-ISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELP 574

Query: 779 GLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
             P  +   +   H  +  + W        P+ +Y I+  +  NS W  V    +G E+ 
Sbjct: 575 HSPQNLVASLNPAHSHAVVLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSDVGPEMT 632

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
             T R        L P  TY+F+V A N++G G+ S+ + +   P + P   P  I   G
Sbjct: 633 GVTVRG-------LTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASG 685

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 955
                + + W+P P  + N     Y + +R      E+Q   +    +  ++   +    
Sbjct: 686 RTNQSIMVQWQPPPEPEHNGVLRGYILRYRLAGLPGEYQQRNIS---SPEVSYCLVTELI 742

Query: 956 YYTEYEVKVQAINDVGPG 973
            +T+YE++V A N  G G
Sbjct: 743 IWTQYEIQVAAYNGAGLG 760



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 774  VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 833
             EG PG P  V V +   +  T+ WT+G     P T Y I AR +    W      +  K
Sbjct: 1805 AEGSPGSPRDVSVTK-STSELTLHWTEGRAGRTPTTGYVIEARPSDEGLW-----DMFAK 1858

Query: 834  EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            ++ R       S++  L    TYEF+V+A N+ GYGEPSSPS   +   + P+
Sbjct: 1859 DIPRGATAYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 1910



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 58/130 (44%), Gaps = 19/130 (14%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G G  S+P   +   A  P QAP R+         L ++WEP P E QN
Sbjct: 1579 YEVVLTAYNVIGEGPASAPVEVFVGEA-APAQAPQRVHVNPLTASQLEVAWEPPPPESQN 1637

Query: 916  APNIYYKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
                 YKI++     +NDTE     F  ET  +  N+            +T+Y V + A 
Sbjct: 1638 GIIQGYKIYYWEADSQNDTEKMRVLFLPETTAKLKNL----------TSHTKYLVSISAF 1687

Query: 968  NDVGPGPESE 977
            N  G GP SE
Sbjct: 1688 NAAGDGPRSE 1697



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 93/228 (40%), Gaps = 39/228 (17%)

Query: 768  TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +        
Sbjct: 963  TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTAISRWIVQGQVG------ 1016

Query: 825  NVSEHVIGKEVDRYTGRKEASIENV-------LVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                  IG E +  T  +E +  +        L P++ Y F++   N +G G  S  S  
Sbjct: 1017 -----AIGDEEEWVTLCEEENEPDAQMLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRV 1071

Query: 878  YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 934
              T    P  AP+ I         L + W PLP  + N    ++ Y+I +W     +   
Sbjct: 1072 IQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVL 1131

Query: 935  SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPES 976
            ++ + +         R+  EF       +TEYE+++QA N +G GP S
Sbjct: 1132 TQVISD---------RLEREFTVEGLEEWTEYELQMQAFNAIGAGPWS 1170



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 38/225 (16%)

Query: 778  PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVI 831
            P  P  +QV   +V   S  ++W  G+    PI ++ +    + R  W +   ++S    
Sbjct: 1383 PAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEAT 1442

Query: 832  GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
               V+R            L P+++Y+ ++ A N++G  + S+ +    T  D P + P  
Sbjct: 1443 ACVVER------------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRS 1490

Query: 892  IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK--------- 939
            +         + I W+P   E  N     Y+I++R+   +     +S+TLK         
Sbjct: 1491 VSVTPRTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAEL 1550

Query: 940  ----EYGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
                 +  V  +      E      Y  YEV + A N +G GP S
Sbjct: 1551 TAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPAS 1595



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 18/213 (8%)

Query: 767  STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 821
            S++    ++ PP + P  + V    +TS  ++W    D   NG P +  Y+I        
Sbjct: 1068 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRI-------K 1120

Query: 822  TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 881
             W       +  +V      +E ++E  L  W+ YE ++ A N +G G P S + +  T 
Sbjct: 1121 YWCPDLPSAVLTQVISDRLEREFTVEG-LEEWTEYELQMQAFNAIGAG-PWSAAVRGRTR 1178

Query: 882  ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKE 940
               P  AP  +         + ++W  +P   QN   + YKI +R K+ D E +S  ++ 
Sbjct: 1179 ESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEPRSHVVR- 1237

Query: 941  YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
             GN   + + +     +  YE++V A   +G G
Sbjct: 1238 -GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNG 1268


>gi|348531930|ref|XP_003453460.1| PREDICTED: protein sidekick-2-like [Oreochromis niloticus]
          Length = 2174

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 185/809 (22%), Positives = 322/809 (39%), Gaps = 73/809 (9%)

Query: 184 DKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLI 243
           D +P  PYF  +P      L +    N + L+C A G     ++W               
Sbjct: 2   DDVP--PYFKTEPVRSQLHLER----NRLVLTCMAEGSWPLEFKWIH------------- 42

Query: 244 DPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRA 303
           +     RF+L    LI +  R     G Y C   N+ G+++    ++   F+G F     
Sbjct: 43  NSTELTRFSLEYRYLIPSLDRS--HAGFYRCIVRNRVGALLQRRTEVQVAFMGSFEEGER 100

Query: 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDA 363
            +  +Q  G  +      ++P     W RD     +    R+ ++ D  L   +    DA
Sbjct: 101 TQSVSQGEGAVIPAPRIRSFPQPQVTWFRDG--RKIPPSSRIAITLDNTLVILSTVAPDA 158

Query: 364 GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-------PEAPKAGDK 416
           G Y   VQ+     G N    P+ +    + + +  P +                    +
Sbjct: 159 GRY--YVQAVNDKNGENKTSQPITL----SVENVGGPADPIAPTIIIPPRNTSVVTGTSE 212

Query: 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRA---SND 473
           V +ECVA   P+   + + R + +  N+   +FNR LTI +  V D G Y C A   S+ 
Sbjct: 213 VTMECVANARPLIKLSISWRKNGVLVNSGLSDFNRRLTILSPVVSDAGYYECEAILRSSS 272

Query: 474 RSALESSVTISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNS 531
             ++ +   + +   P F I   +KH+  + +  +   C+A GVP     W+++   ++ 
Sbjct: 273 VPSVSAGAYLHVLEPPQF-IKEPEKHITAEMEKVVDIPCQARGVPQPDIVWYKDALPID- 330

Query: 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
              P+       +    L +  L P+ D  M+QC A+N      ++  L V ++ P+   
Sbjct: 331 ---PVRTPRYRVLVGGSLQVNGLLPD-DTGMFQCFARNSAGEVQTNTYLAVTSIAPNITA 386

Query: 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISP 647
            P  S++   +G +V + C    AP+P   W+K   ++ SG     R  + E+G+LLISP
Sbjct: 387 GP--SDSTVIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISP 444

Query: 648 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 707
               D+G Y+C A+N  G+DE+   L+V    +     P   ++       + C    + 
Sbjct: 445 SHISDAGTYTCMASNSRGIDEASADLVVW-ARTRITTPPQDQSVIKGTKAIMNCGVTHDP 503

Query: 708 LLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKI 766
            + V ++W   G  I     N    P + +D  G L I+     D G Y C V S  G  
Sbjct: 504 SVTVRHVWEKEGSVI-----NVQSIPRMRLDADGTLHISQTWSGDIGTYTCRVTSVGGND 558

Query: 767 STKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
           S    + V   P  P     V  +  K +  + W        P+  Y +    N N+ W 
Sbjct: 559 SRSAHLRVRQLPHAPENPTAVLSKSEKRAIDLAWAKPFDGNSPLIRYILEVSEN-NAPWA 617

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
            +  ++  +          A   N L+P  +Y+F++ A N++G G+ S  + + + P + 
Sbjct: 618 ILLANIEPEST--------AVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEP 669

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 944
           P   P  +   G     + I W+P P   QN     Y + +R           +K   + 
Sbjct: 670 PSAPPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYIVRYRLTGLP--VDNQIKNISSP 727

Query: 945 GIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            +  + +     +T YE++V A N  G G
Sbjct: 728 DVTTLLLEDLIIWTNYEIEVAAYNGAGLG 756



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 134/591 (22%), Positives = 217/591 (36%), Gaps = 64/591 (10%)

Query: 417 VRLECVAFGYPVPSYNWTRRGSPL-----PRNAYFENFNRILTIPNVKVEDQGEYICRAS 471
           V + C A G P P   W +   P+     PR  Y       L +  +  +D G + C A 
Sbjct: 306 VDIPCQARGVPQPDIVWYKDALPIDPVRTPR--YRVLVGGSLQVNGLLPDDTGMFQCFAR 363

Query: 472 NDRSALESSVTISIQA-EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLN 530
           N    ++++  +++ +  PN T   +D  + +   +   CE  G P    +W +   +L 
Sbjct: 364 NSAGEVQTNTYLAVTSIAPNITAGPSDSTVIDGMSVILHCETSGAPRPAITWQKGERVLA 423

Query: 531 SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590
           S ++ L    R+ + ++   +   +   D   Y C A N      +SA L V+  +    
Sbjct: 424 SGSVQLP---RFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEASADL-VVWARTRIT 479

Query: 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPV 648
             P +     G    +      + +   + VW+K+G++I   S  R ++  +G L IS  
Sbjct: 480 TPPQDQSVIKGTKAIMNCGVTHDPSVTVRHVWEKEGSVINVQSIPRMRLDADGTLHISQT 539

Query: 649 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 708
              D G Y+C  T+V G D     L V        QLP      A  N     S   +  
Sbjct: 540 WSGDIGTYTCRVTSVGGNDSRSAHLRV-------RQLP-----HAPENPTAVLSKSEKRA 587

Query: 709 LDVAYIWTHNG----VRIGNMDLNELETP----NINIDGGLLEITNASFADAGEYE---C 757
           +D+A+    +G    +R   ++++E   P      NI+     +T      A  Y+   C
Sbjct: 588 IDLAWAKPFDGNSPLIRY-ILEVSENNAPWAILLANIEPESTAVTVNGLIPARSYQFRLC 646

Query: 758 VV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI 813
            V    K    K + + ++  E P   P  V        S  IQW        P +H   
Sbjct: 647 AVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQSIMIQW-----QPPPESHQNG 701

Query: 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV-------LVPWSTYEFKVIAGNEL 866
           I R       + V   + G  VD     K  S  +V       L+ W+ YE +V A N  
Sbjct: 702 ILRG------YIVRYRLTGLPVDNQI--KNISSPDVTTLLLEDLIIWTNYEIEVAAYNGA 753

Query: 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF-W 925
           G G  S    ++ T    P  AP  +         +  +W     +  N  N  YK+  W
Sbjct: 754 GLGTFSHKVTEW-TLQGVPTIAPGNVQAEAVNSTTIRFTWTAPNPQFINGINQGYKLLAW 812

Query: 926 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
               D E    T++      + V  +     +TEY   V      G GP S
Sbjct: 813 EPGKDDEVAMVTVRPNFQDSVHVGYVTGLKKFTEYYTSVLCFTTPGDGPRS 863



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 43/265 (16%)

Query: 733  PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQ 785
            PN+ ++    GL  +T  +   AG       ++ G+    ++ I  G PP LPG    + 
Sbjct: 927  PNVTLEYRVTGLTALTTYTIEVAG------MTSKGQGMLSSSTISSGVPPELPGPPTNMA 980

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 842
            +  +   S  +Q+  G      I+ + + A+      N  W  V  H +  E        
Sbjct: 981  ISNIGPRSINLQFKPGYDGKTSISRWLVEAQVGAVGENEDWLMV--HQVFNE-------P 1031

Query: 843  EASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 900
            EA    V  L P++ Y F++   N +G   PS PS +  T    P  AP+ +        
Sbjct: 1032 EARSLEVPGLNPYTFYRFRMRQVNIVGTSPPSQPSRKIQTLPAPPDMAPANVTLRTASET 1091

Query: 901  DLSISWEPLPREK--QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-- 956
             L + W PLP  +   NA  + Y++ + +      Q   L       +   R+  EF   
Sbjct: 1092 SLWLRWMPLPEWEYNGNAEQVGYRVQYSRAGS---QGHPLTH-----VITDRLEREFTIE 1143

Query: 957  ----YTEYEVKVQAINDVGPGPESE 977
                +TEYEV+VQA+N +G GP S+
Sbjct: 1144 DLEEWTEYEVRVQAVNGIGVGPWSQ 1168



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 81/206 (39%), Gaps = 25/206 (12%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
             V      + W  G+    P+ +Y +  R    S W  V    +  E   Y       I 
Sbjct: 1392 HVQARQVLLSWEPGSDGLSPVRYYTVQLRELPESNW-TVHSASVSHEATTY-------IV 1443

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
            + L P+++Y+F++ A N++G  E S  S    T  D P +APS +         + I W+
Sbjct: 1444 SRLKPFTSYQFRIKATNDIGDSEYSQESEAITTLQDVPDEAPSILSVTPHTTTSVLIRWQ 1503

Query: 908  PLPREKQNAPNIYYKIFWRK------------KNDTEFQSE-----TLKEYGNVGIAVVR 950
            P   EK N   + ++I +R+             N     +E     +L+   +  +    
Sbjct: 1504 PPSEEKINGILLGFRIRYRELLYDRLRSYIHTVNSASAWAELSAPYSLRNLSDSTLTQYE 1563

Query: 951  IPSEFYYTEYEVKVQAINDVGPGPES 976
            +     +  YE+++   N VG GP S
Sbjct: 1564 LDKLSKHKRYEIRMSVYNAVGEGPTS 1589



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G P+SP  +       P   P  +         L ++W+P P + QN
Sbjct: 1573 YEIRMSVYNAVGEG-PTSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVDAQN 1631

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  ++KN+TE         G      V++ +   YT Y + V   N  G 
Sbjct: 1632 GDIQGYKIYFWEFQRKNETERMRTLFMPEGG-----VKLKNLTGYTTYMISVAPFNAAGD 1686

Query: 973  GPES 976
            GP S
Sbjct: 1687 GPRS 1690



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 30/179 (16%)

Query: 796  IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855
            +Q++   + G P+TH                   VI   ++R     E +IE+ L  W+ 
Sbjct: 1116 VQYSRAGSQGHPLTH-------------------VITDRLER-----EFTIED-LEEWTE 1150

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE +V A N +G G  S P  +  T    P   P+ +         + + W  +P   +N
Sbjct: 1151 YEVRVQAVNGIGVGPWSQPV-RGRTRESVPSSGPTNVSAFATTSSSILVRWFEVPEPDRN 1209

Query: 916  APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
               + YK+ +++K+ D+     T++  GN     V++     Y  YE++V A   +G G
Sbjct: 1210 GLILGYKVVYKEKDSDSPVHFWTVE--GN-ATHSVQLTGLGKYVLYEIQVLAFTRIGDG 1265


>gi|432097796|gb|ELK27832.1| Neural cell adhesion molecule L1 [Myotis davidii]
          Length = 1206

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 198/830 (23%), Positives = 335/830 (40%), Gaps = 78/830 (9%)

Query: 180 IENPDKIPRGPYFIKQPTDVVFDLSKRSIL----NDITLSCYAGGYPNPSYEWFKEDY-- 233
           I+ PD+   G + ++ P  V+ + S R ++    ++I+L C A G P   + W ++    
Sbjct: 20  IQIPDEY-EGQHVMEPP--VITEQSPRRLVVFPTDEISLKCEASGKPEVMFRWTRDGVHF 76

Query: 234 -VQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAF 292
              + L   +        FT++G N       Q    G+Y C ASN  G+ +S  +QL  
Sbjct: 77  KPNEELDVTVKQAPHSGSFTIAGNNSNFAQRFQ----GTYRCFASNDLGTAMSHEIQLMA 132

Query: 293 GFIGEFNLKRAPEIGNQNWGKAMF-CDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG 351
               ++  +    +  +     +  C PP +   +  YW      + +++D+RV +  +G
Sbjct: 133 EGAPKWPKETVKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKIMH-IKQDERVTMGQNG 191

Query: 352 ALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----QQLKFPNNFPKT 406
            LYF+  L   +  +Y C+     + T        L+V   ++      +L FP N    
Sbjct: 192 NLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNASSH 251

Query: 407 FPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEY 466
                  G  + LEC+A G                               NV  ED GEY
Sbjct: 252 L--VALQGQPLVLECIAEGLTTTRLCTCXXXXXXXXXXXXXXXXXXXXXXNVGEEDDGEY 309

Query: 467 ICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526
            C A N   +   +  ++++A P +      +           C+  G P+   +W  NG
Sbjct: 310 RCLAENSLGSDRHAYYVTVEAAPYWLHKPQSRLYGPGETARLDCQVQGRPEPEVTWRING 369

Query: 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586
             +  E L  +DQ +Y IQ   L +  + P  D  + QC A+N+     ++A + V+ L 
Sbjct: 370 --IPVEELLAKDQ-KYRIQHGALILSNVQPS-DTMVTQCEARNRHGLLLANAYIYVVQL- 424

Query: 587 PSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLL 644
           P+    P ++ETY A EG    + C    AP P   W  K+G  +    R   + NG L 
Sbjct: 425 PAKILTP-DNETYLAVEGSTAYLLCKVFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLG 483

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRC 701
           I  +  +D+G Y C A N    D++   ++    +   +   Q P          +   C
Sbjct: 484 IRDLQANDTGHYFCQAAN----DQNNVTIVANLQVKDATRITQGPQSTIKKKGSRVTFTC 539

Query: 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN----IDGGLLEITNASFADAGEYEC 757
            A  +  L  +  W  +G          L+ P  +    I+ G L I +  ++D G Y C
Sbjct: 540 QATFDPSLQQSITWRRDG--------RSLQEPGDSDKYFIEDGHLVIHSLDYSDQGNYSC 591

Query: 758 VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI- 813
           V  + +  + ++  + V G PG    +++ + H   ++   + W+    +  PI  Y I 
Sbjct: 592 VASTKLDVVESRAELQVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIE 651

Query: 814 -----IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868
                +A   W S         +GK         + S    L P+  Y F+V A N+ G 
Sbjct: 652 FEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGP 697

Query: 869 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
           GEPS  S    TP   P + P  + G G +  ++ I+W+PL     NAP + Y++ WR +
Sbjct: 698 GEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQ 757

Query: 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
                  E +     V    + + +   +  YE+KVQ IN  G GPE +V
Sbjct: 758 GTRGAWQEQI-----VSDPFLVVSNTSTFVPYEIKVQTINSQGKGPEPQV 802


>gi|348558216|ref|XP_003464914.1| PREDICTED: protein sidekick-2 [Cavia porcellus]
          Length = 2159

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 192/812 (23%), Positives = 328/812 (40%), Gaps = 89/812 (10%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   +                 
Sbjct: 13  PYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKWLHNNR-------------ELT 55

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           +F+L    +I +  R     G Y C   N+ G+++    ++   ++G  N +   +  + 
Sbjct: 56  KFSLEYRYMITSLDRT--HAGFYRCVVRNRMGALLQRQTEVQVAYMG--NFEEGEKYQSV 111

Query: 310 NWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y 
Sbjct: 112 SHGEAAVIRAPRIASFPRPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY- 168

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF-------PEAPKAGDKVRLE 420
             VQ+     G N    P+ +      + +  P +                    +V +E
Sbjct: 169 -YVQAVNDKNGDNKTSQPITL----AVENVGGPADPIAPTIIIPPKNTSVVAGTSEVIME 223

Query: 421 CVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALE 478
           CVA   P+   +  W + G  +  ++   ++NR LTIP+  V D G Y C A    S++ 
Sbjct: 224 CVANARPLIKLHIIWKKDGVQV--SSGLSDYNRRLTIPSPTVSDAGYYECEAVLRSSSVA 281

Query: 479 SSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSET 533
             V    +S+   P F +   ++H+  + +  +   C A GVP  + +W+++  ++  E 
Sbjct: 282 PVVRGAHLSVLEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAAVVEVEK 340

Query: 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
           L    Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + P
Sbjct: 341 LARFRQR----GDGGLQISGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGP 395

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVS 649
           L+S     +G +V + C    AP+P   W+K   I+ SG     R  + E+G+LLISP  
Sbjct: 396 LDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTH 453

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  +
Sbjct: 454 ISDAGTYTCLATNSRGVDEASADLVVW-ARTRITRPPQDQSVIKGTQASMVCGVTHDPRV 512

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 768
            + Y+W  +G  +          P I +D  G L IT     D G Y C V S  G  S 
Sbjct: 513 TIRYVWEKDGATLATES-----NPRIRLDKNGSLHITQTWSGDIGTYTCRVLSAGGNDSR 567

Query: 769 KTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
              + V   P  P      +    + +  + W        P+  Y +    N N+ W  +
Sbjct: 568 SAHLRVRQLPHAPEHPVATLSTTERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPWTTL 626

Query: 827 SEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
              V            EA+   V  LVP  +Y+F++ A N++G G+ S  + + + P + 
Sbjct: 627 LASV----------DPEATSVMVKGLVPARSYQFRLCAVNDVGRGQFSKDTERVSLPEEP 676

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEY 941
           P   P  +   G     + I W+P P   QN     Y I +         +F++ T  + 
Sbjct: 677 PTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADV 736

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            N+ +  + I     +T YE++V A N  G G
Sbjct: 737 NNLLLEDLII-----WTNYEIEVAAYNSAGLG 763



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 33/261 (12%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 934  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 990

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 845
            +   S T+Q+  G      I+ + + A+         W  +  H +  E D     +   
Sbjct: 991  IGPRSVTLQFRPGYDGKTSISRWLVEAQVGMVGEGEEWLLI--HQLSNEPDA----RSME 1044

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 905
            + + L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L + 
Sbjct: 1045 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1103

Query: 906  WEPLPREKQNAP--NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 957
            W PLP  + N    ++ YKI   K + ++   +TL       + + R+  E+       +
Sbjct: 1104 WMPLPEMEYNGSPESVGYKI---KYSRSDGHGKTLSH-----VVLDRVEREYTIEDLEEW 1155

Query: 958  TEYEVKVQAINDVGPGPESEV 978
             EY V+VQA N +G GP S V
Sbjct: 1156 MEYRVQVQAFNAIGSGPWSPV 1176



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1819 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1875

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1876 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1909



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 11/125 (8%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G P SP  +       P  AP  +   G     L ++WEP P + QN
Sbjct: 1582 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPRNVVVHGTTATQLDVTWEPPPLDSQN 1640

Query: 916  APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                 YKI FW  +++N TE  ++  L E G      V++ +   YT Y V V A N  G
Sbjct: 1641 GNIQGYKIYFWEAQRQNLTERVKTLFLAENG------VKLKNLTGYTAYMVTVAAFNAAG 1694

Query: 972  PGPES 976
             GP S
Sbjct: 1695 DGPRS 1699



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1079 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGSPESVGYKIKYSRSDGHGKTLS-- 1136

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W  Y  +V A N +G G P SP     T    P  
Sbjct: 1137 -HVVLDRVER-----EYTIED-LEEWMEYRVQVQAFNAIGSG-PWSPVVLGRTRESVPSS 1188

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1189 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVRYKEK-DSDSQPHFWLVEGNASRS 1247

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
             V++     Y  YEV+V A   +G G  S 
Sbjct: 1248 -VQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1276



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R   +  W     +V+ +   
Sbjct: 1389 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVNHNTSS 1447

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1448 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTVL 1495

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1496 SVTPHTTTSVLIRWQPPAEDKVNGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1555

Query: 953  SEFYYTE-------------------YEVKVQAINDVGPGPES 976
            S +                       YE+++   N VG GP S
Sbjct: 1556 SLYSMRNLSRPSLTQYELDNLNKHRWYEIRMSVYNAVGEGPLS 1598



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 76/196 (38%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +      E V+     +
Sbjct: 1288 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNATAANTAAVE-VLAPSARQ 1346

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1347 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1398

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY I  R+     +   +     N     V     F
Sbjct: 1399 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVNHNTSSFTVDRLKPF 1456

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1457 --TSYKFRVKATNDIG 1470


>gi|410304160|gb|JAA30680.1| neurofascin [Pan troglodytes]
          Length = 613

 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 166/605 (27%), Positives = 254/605 (41%), Gaps = 45/605 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILN---DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPL 246
           P  + QP  +     K  I++   +I + C A G P PS+ W +      R      DP 
Sbjct: 28  PMDLTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTR----NSRFFNIAKDPR 83

Query: 247 SDKRFTLSGGNLIIN---DPRQVEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNL 300
              R     G L+I+     R     G Y C A NKFG+ +S  ++L         + NL
Sbjct: 84  VSMR--RRSGTLVIDFRSGGRPEGYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENL 141

Query: 301 KRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALE 359
              P +  +     + C+PP   P    +W        + +DKRV   ++G LYFS  + 
Sbjct: 142 D--PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM-EPITQDKRVSQGHNGDLYFSNVML 198

Query: 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA--GDKV 417
           Q    +YSCN +   + T +    F LKV       +      +P+    +     G  +
Sbjct: 199 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDL 258

Query: 418 RLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
            LEC+A G P P   W ++G  LP + A FENFN+ L I NV  ED GEY C ASN   +
Sbjct: 259 LLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGS 318

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
           +  ++++ ++A P +     +  +    D    C A G P  T  W  NGE L    L  
Sbjct: 319 IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQ---LAP 375

Query: 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
            + +R    D ++        R  A+YQC   N+     ++A + VL + P     P   
Sbjct: 376 PNPNREVAGDTIIFRDTQISSR--AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQ 432

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDS 653
                      + C    +P P   W K+G   GS   GG   ++ENG+L I  + ++D 
Sbjct: 433 LIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQ 490

Query: 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 713
           GIY+C ATN+ G  E++ RL V   P+   ++P          +QL C    +  L +  
Sbjct: 491 GIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTV 549

Query: 714 IWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771
            W  +   + IGN    E ++         L I   +  D G Y CV  + + +   K  
Sbjct: 550 SWLKDDEPLYIGNRMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAY 600

Query: 772 VIVEG 776
           + V G
Sbjct: 601 LTVLG 605



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 121/302 (40%), Gaps = 30/302 (9%)

Query: 495 LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554
           + D  +D + ++   CEA G P  ++ W RN    N    P     R   +   L I + 
Sbjct: 42  VKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFR 98

Query: 555 N---PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN 611
           +   PE     YQC A+N+  T  S+     ++  P + K  L+      EG  +T+ CN
Sbjct: 99  SGGRPEGYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCN 157

Query: 612 PEAA-PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATN--VHGM 666
           P    P P   W       I    R     NG+L  S V   D    YSC A     H +
Sbjct: 158 PPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTI 217

Query: 667 DESKG-RLIVLHGPSYYEQLP----PKITIAAHR-----NLQLRCSAHTEELLDVAYIWT 716
            +     L VL      E+ P    P+ T ++       +L L C A      D+A  W 
Sbjct: 218 QQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WY 275

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
             G   G++  ++ +  N N     L ITN S  D+GEY C+  + +G I    +V V+ 
Sbjct: 276 KKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 329

Query: 777 PP 778
            P
Sbjct: 330 AP 331



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 144/397 (36%), Gaps = 51/397 (12%)

Query: 408 PEAPKAGDKVRLEC-VAFGYPVPSYNWTRRG-SPLPRNAYF-ENFNRILTIPNVKVED-Q 463
           P   + G  + L+C    G P P   W      P+ ++    +  N  L   NV ++D Q
Sbjct: 143 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQ 202

Query: 464 GEYICRA---------SNDRSALESSVTISI-QAEPNFTIP---LTDKHMDNQADLTWTC 510
            +Y C A           +   L+   T  + +  P+F  P    + + +    DL   C
Sbjct: 203 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLEC 262

Query: 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQ 570
            A GVP    +W++ G  L S+    E+ ++     NV        E D   Y C A N+
Sbjct: 263 IASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYFCLASNK 315

Query: 571 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--I 628
           + +   +  +RV    P +   P       GE G   + C     PKP   W  +G    
Sbjct: 316 MGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMVNGEPLQ 372

Query: 629 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 688
           +      +      ++          +Y C  +N HG   +   + VL        +PP+
Sbjct: 373 LAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL-------DVPPR 425

Query: 689 ITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPNINIDGG 740
           +   + RN  +R   +    LD  +         W  NG +  N+D           + G
Sbjct: 426 ML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV----YENG 478

Query: 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777
            LEI      D G Y CV  + +GK   +  + V+ P
Sbjct: 479 SLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515


>gi|440913028|gb|ELR62536.1| Protein sidekick-1, partial [Bos grunniens mutus]
          Length = 2033

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 195/823 (23%), Positives = 322/823 (39%), Gaps = 103/823 (12%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   D       + L    S+ 
Sbjct: 5   PYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWTHND-------SELTTYTSEY 53

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           ++ +           Q  D G Y C   N+ G+++    ++   ++G+F       + ++
Sbjct: 54  KYVIPS--------LQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGDFTDADERRVVSE 105

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGAL-------------YFS 356
                +   P ++ P     W RD   + +    R+ ++ +  L             Y  
Sbjct: 106 GRAAVLSLPPISSCPRPQVTWFRDG--HKIIPSSRIAITLENQLVILAAAASDAGAYYVQ 163

Query: 357 ALEQIDAGN-YSCNVQSKVS-DTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG 414
           A+ + +  N  S  V   ++ DTG      P+ V P SN   +                 
Sbjct: 164 AVNERNGENKTSPPVHLSIARDTGMPEAVAPIIVVPPSNRSVVA--------------GS 209

Query: 415 DKVRLECVAFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASN 472
            +  LEC+A   P    S  W R G  +        F R LTI N    D G Y+C A+ 
Sbjct: 210 SETTLECIANARPAEELSVTWKRNGVRV--TTGLHGFGRRLTISNPTSSDTGVYVCEAAL 267

Query: 473 DRSALE---SSVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGEL 528
             SA E   +   +SI   P FT  P +    + + ++   CEA GVP     WF++   
Sbjct: 268 PGSAFEPARARAFLSIIEPPYFTAEPKSRILAEVEENVDIVCEAMGVPPPALQWFKDAIS 327

Query: 529 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 588
           +N     L++     +    L +R L PE D  ++QC A N      +   L V  + P+
Sbjct: 328 INK----LQNPRYQVLAGGGLRVRQLRPE-DSGIFQCLASNAGGEVQTHTYLDVTNVAPA 382

Query: 589 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLL 644
           F + P+++    G      + C    AP+P  VW +  +I+ SG  R     + E+G L 
Sbjct: 383 FTQLPVDTTVTDGT--TAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQ 440

Query: 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 704
           I+PVS  D+G Y+C A N  G  ++   L V +  S     P  + +       L C A 
Sbjct: 441 IAPVSIQDAGSYTCHAANSEGSLDASAMLTVWNRTSIVTP-PEDLVVIKGTTATLHCGAT 499

Query: 705 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 764
            +  + + Y+W  + V I     + +    +  DG LL I+     D G+Y C V S  G
Sbjct: 500 HDPRISLRYVWKKDNVVIAPSSSSRVV---VEKDGSLL-ISQTWSGDIGDYTCGVISEGG 555

Query: 765 KISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 822
             S    + V   P  P  +   +   H  +  + W        P+ +Y I+  +  NS 
Sbjct: 556 NDSRTARLEVIELPHSPQNLVASLNPAHSHAVVLSWVRPFDGNSPVLYY-IVELSENNSP 614

Query: 823 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
           W  V    +G E+   T R        L P  TY+F+V A N++G G+ S+ + +   P 
Sbjct: 615 W-KVHLSDVGPEMTGVTVRG-------LTPARTYQFRVCAVNQVGKGQYSAETSRLMLPE 666

Query: 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN------------APNIYYKIFWRKKND 930
           + P   P  I   G     + + W+P P  + N            AP   Y++       
Sbjct: 667 EPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHNGVLRGYILRQVAAPGHAYRL---AGLP 723

Query: 931 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            E+Q   +    +  ++   +     +T+YE++V A N  G G
Sbjct: 724 GEYQQRNIS---SPEVSYCLVTELIIWTQYEIQVAAYNGAGLG 763



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+ WT+G     P T Y I AR +    W      +  K+
Sbjct: 1806 EGSPGSPRDVSVTK-STSELTLHWTEGQAGRTPTTGYVIEARPSDEGLW-----DMFAKD 1859

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A N+ GYGEPSSPS   +   + P+
Sbjct: 1860 IPRGATAYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAKVETPF 1910



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 39/228 (17%)

Query: 768  TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 824
            T +T+    PP LPG    + +  +   SAT+Q+  G      I+ + +  +        
Sbjct: 966  TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTAISRWIVQGQVG------ 1019

Query: 825  NVSEHVIGKEVDRYTGRKEASIENV-------LVPWSTYEFKVIAGNELGYGEPSSPSPQ 877
                  IG E +  T  +E +  +        L P++ Y F++   N +G G  S  S  
Sbjct: 1020 -----AIGDEEEWVTLCEEENEPDAQMLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRV 1074

Query: 878  YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 934
              T    P  AP+ I         L + W PLP  + N    ++ Y+I +WR    +   
Sbjct: 1075 IQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRLDLPSAVL 1134

Query: 935  SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPES 976
            ++ + +         R+  EF       +TEYE+++QA N +G GP S
Sbjct: 1135 TQVISD---------RLEREFTVEGLEEWTEYELQMQAFNAIGAGPWS 1173



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 38/225 (16%)

Query: 778  PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVI 831
            P  P  +QV   +V   S  ++W  G+    PI ++ +    + R  W +   ++S    
Sbjct: 1386 PAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEAT 1445

Query: 832  GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 891
               V+R            L P+++Y+ ++ A N++G  + S+ +    T  D P + P  
Sbjct: 1446 ACVVER------------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRS 1493

Query: 892  IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK--------- 939
            +         + I W+P   E  N     Y+I++R+   +     +S+TLK         
Sbjct: 1494 VSVTPRTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAEL 1553

Query: 940  ----EYGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPES 976
                 +  V  +      E      Y  YEV + A N +G GP S
Sbjct: 1554 TAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPAS 1598



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 20/214 (9%)

Query: 767  STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWN 820
            S++    ++ PP + P  + V    +TS  ++W    D   NG P +  Y+I   R +  
Sbjct: 1071 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRLDLP 1130

Query: 821  STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 880
            S    V   VI   ++R     E ++E  L  W+ YE ++ A N +G G P S + +  T
Sbjct: 1131 SA---VLTQVISDRLER-----EFTVEG-LEEWTEYELQMQAFNAIGAG-PWSAAVRGRT 1180

Query: 881  PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 939
                P  AP  +         + ++W  +P   QN   + YKI +R K+ D E +S  ++
Sbjct: 1181 RESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEPRSHVVR 1240

Query: 940  EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
              GN   + + +     +  YE++V A   +G G
Sbjct: 1241 --GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNG 1271


>gi|350417616|ref|XP_003491509.1| PREDICTED: protein sidekick-like [Bombus impatiens]
          Length = 2168

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 208/809 (25%), Positives = 323/809 (39%), Gaps = 70/809 (8%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P F  QP+     LS+        L C A G P P Y+WFK+             PLS++
Sbjct: 38  PRFTTQPSSSGNILSENRTK---FLQCQARGNPQPKYKWFKDGV-----------PLSNE 83

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
               S     I   R+ ED G YHC A+N  GSI SE +  A  ++G F       +  +
Sbjct: 84  --LTSEPYFRIQSTRR-EDAGVYHCVATNDVGSIFSERITFAVAYMGVFEDLTERMVSVK 140

Query: 310 NWGKAMFCDPPT-NYPGVNYYWARDYFPNFVEEDKRVFVSYDGA----LYFSALEQIDAG 364
           +   A+   PP  ++P  +  W       F  +     + Y       L  +A E  D G
Sbjct: 141 SGSAAVLTLPPIESHPAPDVTW-------FTSDGSLYGIKYASVHHTLLILNASES-DQG 192

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
            Y     +       N PFF L+V   +N +        P+   +  K  D   + C+A 
Sbjct: 193 LYRARAINTQLGKEENSPFFKLQVTGDANAEVAPSIIVKPQDT-QIIKDQDVTYIHCIAN 251

Query: 425 GYPVPSYN--WTRRGSPLPRN----AYFENFNRILTIPNVKVEDQGEYICRA---SNDRS 475
              +      WT+ G P+  +    ++ +++NR L + +  +   G Y C     S    
Sbjct: 252 ARSLHELRTLWTKDGIPIENSRISYSFNDSWNRTLALISANITYTGVYSCHVDLRSGGYP 311

Query: 476 ALESSVTISIQAEPNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
            + +S  + +  +P F   L  + + D  + +T  C+A GVP    +WFRN E ++   L
Sbjct: 312 TVNASANVVVYEKPTFITELKRETLSDYGSTVTLPCDAVGVPPPKITWFRNAEPVD-HLL 370

Query: 535 PLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
                 RY + +D  LTI+ L  + D  M+QC A N      S   L+  T  P  +  P
Sbjct: 371 GF----RYALEEDGSLTIKKLTMD-DSGMFQCLASNDAGEASSYTWLKAKTSGPIMENGP 425

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDD 652
            +++T   +G + T+ CN  AAP P   W  +  I +   GR ++ +NG+LLI+ V  +D
Sbjct: 426 -QNQTIL-DGKDATLTCNAVAAPIPNTTWIYNDTIPVEIAGRVQVLDNGDLLIAAVKPND 483

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEELL 709
           +G Y+C   N  G       L VL      +  PP    + +     LQ + S     L 
Sbjct: 484 AGKYTCIRANEAGSVNGSAYLTVLVRTQIIQ--PPVDTSVLLGYTAELQCKVSNDPSVLY 541

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769
           D+A  W HN   I       ++  N     G LEI     +D GEY C V S  G  +  
Sbjct: 542 DIA--WFHNSQVINTQASQRVKMRN----DGTLEIAAVRASDVGEYMCSVVSPGGNETRS 595

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTS---ATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
             + V   P  P  V    V + S     + W  G     P   + +  R   +      
Sbjct: 596 ARLSVIELPFAPINVMASRVERISPRTINVSWVPGFDGNSPTKKFIVQRREVSDLGPIPD 655

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
           S      E +  + +    + N L   + Y+F+V A N +G G PS PS     P + P 
Sbjct: 656 SALNWITECNNVSAQNRWVLLNNLKAAAAYQFRVTAENSVGEGPPSDPSNVVVLPQEPPS 715

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNV 944
             P    G      ++   W+    E +N   + Y + +R    ND  +   T++   N 
Sbjct: 716 GPPVGFVGSARSSSEIITQWQLPLEEYRNGHILGYVLRYRLYGYNDNPW---TIQNITNE 772

Query: 945 GIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
                 I     + +Y V++ A ND G G
Sbjct: 773 AQRNYLITDLITWKDYIVQIAAYNDKGVG 801



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 19/224 (8%)

Query: 754  EYECVVKSTVGKISTKTTVIVEGP----PGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 809
            ++E V  +++G       VI  G     P  P  + +  +   S  +Q+T G      I 
Sbjct: 995  KFEVVAWTSIGPGKPAVAVIQSGVEPVLPEPPTKLALSNIDAFSVVLQFTPGFDGNSSII 1054

Query: 810  HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELG 867
             + + A+T  N+TW+N+ E              +AS   V  L+P+  Y+ ++IA N +G
Sbjct: 1055 KWTVQAQTTRNTTWYNIYE----------VSDPDASTITVGGLIPFMQYKLRLIANNVVG 1104

Query: 868  YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
              +PS P+ ++ T    P   P  +        +L + W PL + +       Y + + +
Sbjct: 1105 ASQPSEPTKEFQTIQAPPSHPPRNVTVRAMSATELRVRWIPLQQIEWYGNPRGYNVTYTE 1164

Query: 928  KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                + +S T++++      +  +     Y  Y++ +QA+NDVG
Sbjct: 1165 VRTNKSKSITIEDHTANSYILENMEE---YALYKIVMQALNDVG 1205



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 770  TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
            TT   EG P  P  + V +   +S  +QWT+GA+   PI  Y I  R   +S W  +   
Sbjct: 1824 TTGPQEGSPMAPSNLAVTKT-VSSVELQWTNGASGKGPILGYYIETRRKDDSRWQTIVRS 1882

Query: 830  VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
              G  +  Y+     S +N L+P ++Y F+VI+ N  G   P+  +    TP+
Sbjct: 1883 SNGP-LTEYS----VSYQN-LLPSTSYLFRVISYNRYGISYPAYSTETILTPS 1929



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 645
           +P F  +P  S     E     + C     P+PK+ W KDG  + +    ++       I
Sbjct: 37  EPRFTTQPSSSGNILSENRTKFLQCQARGNPQPKYKWFKDGVPLSN----ELTSEPYFRI 92

Query: 646 SPVSRDDSGIYSCTATNVHG 665
               R+D+G+Y C ATN  G
Sbjct: 93  QSTRREDAGVYHCVATNDVG 112



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 76/198 (38%), Gaps = 13/198 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            E  PG P  V   +V  T+A I W         I  YK++   N      N  +H   KE
Sbjct: 1320 EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEILAYKVMFHLN------NSQDHQFSKE 1373

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
               +           L P   Y F V A   LG+G+ +          ++P Q+PS    
Sbjct: 1374 ---FPASDRTFRATGLEPEKYYMFSVTAQTRLGWGKTAYALVFTTNNRERP-QSPSMPQI 1429

Query: 895  GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
               +I    I++   P     AP  YY +  + +N   FQ  T+ E     +        
Sbjct: 1430 SRSQIQSRQITFNWTPGRDGFAPLRYYTV-QQSENSGPFQ--TIPERVEPTLTSYTANDL 1486

Query: 955  FYYTEYEVKVQAINDVGP 972
              +T Y+ ++QA ND+GP
Sbjct: 1487 KPFTFYQFRIQATNDIGP 1504


>gi|410981644|ref|XP_003997176.1| PREDICTED: protein sidekick-2 [Felis catus]
          Length = 2247

 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 199/812 (24%), Positives = 336/812 (41%), Gaps = 87/812 (10%)

Query: 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSD 248
            PYF  +P      L      N + L+C A G     ++W             L +    
Sbjct: 98  APYFKTEPVRTQVHLEG----NRLVLTCMAEGSWPLEFKW-------------LHNSREL 140

Query: 249 KRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGN 308
            +F+L    +I +  R     G Y C   N+ G+++    ++   ++G F  +   +  +
Sbjct: 141 TKFSLEYRYMITSLDRT--HAGFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKYQS 196

Query: 309 QNWGKAMFCDPP--TNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNY 366
            + G+A     P   ++P     W RD     +    R+ ++ +  L   +    DAG Y
Sbjct: 197 VSHGEAAVIRAPRIASFPRPQVTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY 254

Query: 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPK------AG-DKVRL 419
              VQ+     G N    P+ +      + +  P +        P       AG  +V +
Sbjct: 255 --YVQAVNDKNGDNKTSQPITL----AVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTM 308

Query: 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES 479
           ECVA   P+   + T +   +P +    ++NR LTIP     D G Y C A+   S++ S
Sbjct: 309 ECVANARPLIKLHITWKKDGVPLSGGISDYNRRLTIPGPTGSDAGYYECEAALRSSSIPS 368

Query: 480 SVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSETL 534
            V    +S+   P F +   D+H+  + +  +   C A GVP  +  W+++  ++    L
Sbjct: 369 VVRGAYLSVLEPPQF-VKEPDRHITAEMEKVMDIPCRAKGVPPPSIIWYKDAAVVEVGRL 427

Query: 535 PLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
                +R+  + D  L I  L P+ D  M+QC A+N      +S  L V ++ P+  + P
Sbjct: 428 -----NRFRQRGDGGLQISGLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGP 481

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVS 649
           L+S     +G +V + C    AP+P   W+K   I+ SG     R  + E+G+LL+SP  
Sbjct: 482 LDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPTR 539

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 709
             D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C    +  +
Sbjct: 540 ISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRV 598

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 768
            V Y    +G  +G M+ N    P I +D  G L I+     D G Y C V S  G  S 
Sbjct: 599 TVRYXXXKDGATLG-MESN----PRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSR 653

Query: 769 KTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
              + V   P  P      +    + +  + W        P+  Y +    N N+ W   
Sbjct: 654 SAHLRVRQLPHAPERPVATLSTAERRAINLTWAKPFDGNSPLLRYVLEMSEN-NAPW--- 709

Query: 827 SEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
              V+   VD      EA+   V  LVP  +Y+F++ A N++G G+ S  + + + P + 
Sbjct: 710 --TVLLASVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEP 762

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEY 941
           P   P  +   G     + I W+P P   QN     Y I +         +F++ T  + 
Sbjct: 763 PTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDADV 822

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            N+ +  + I     +T YE++V A N  G G
Sbjct: 823 NNLLLEDLII-----WTNYEIEVAAYNSAGLG 849



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 59/127 (46%), Gaps = 13/127 (10%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PSSP  +       P  AP  +   G     L ++WEP P E QN
Sbjct: 1668 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1726

Query: 916  APNIYYKI-FW----RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
                 YKI FW    +++N TE  ++  L E G      VR+ +   YT Y V V A N 
Sbjct: 1727 GDIQGYKIYFWEAQAQRRNVTERVKTLFLAENG------VRLKNLTGYTAYMVSVAAFNA 1780

Query: 970  VGPGPES 976
             G GP S
Sbjct: 1781 AGDGPRS 1787



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 109/264 (41%), Gaps = 39/264 (14%)

Query: 733  PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 785
            PN+ ++    GL  +T  +     E   +     G++S  T  I  G PP LPG    + 
Sbjct: 1020 PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 1073

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 842
            +  +   S T+Q+  G      I+ + + A+         W  V  H +  E D    R 
Sbjct: 1074 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLTNEPD---ARS 1128

Query: 843  EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 902
                E  L P++ Y F++   N +G   PS PS +  T    P  AP+ +         L
Sbjct: 1129 MEVPE--LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1186

Query: 903  SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 956
             + W PLP  + N    ++ YKI   K +  +   +TL       +   R+  E+     
Sbjct: 1187 WLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH-----VVQDRVEREYTIEDL 1238

Query: 957  --YTEYEVKVQAINDVGPGPESEV 978
              +TEY V+VQA N +G GP S+ 
Sbjct: 1239 EEWTEYRVQVQAFNAIGSGPWSQT 1262



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1907 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1963

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1964 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1997



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y +  R   +  W     +VS +   
Sbjct: 1475 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPSGRWALHSASVSHNASA 1533

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1534 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIV 1581

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1582 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1641

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1642 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1684



 Score = 47.0 bits (110), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y++  R N  +T    +  V+     +
Sbjct: 1374 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQVTHRLN-ATTANTATVEVLAPSARQ 1432

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1433 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1484

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY +  R+     +   +     N    VV     F
Sbjct: 1485 DVKARSVLLSWE--PGSDGLSPVRYYTVQTRELPSGRWALHSASVSHNASAFVVDRLKPF 1542

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1543 --TSYKFRVKATNDIG 1556



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R + +    +  
Sbjct: 1165 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1222

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1223 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1274

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1275 GPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS 1333

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1334 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1362


>gi|354502214|ref|XP_003513182.1| PREDICTED: contactin-3-like, partial [Cricetulus griseus]
          Length = 315

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/292 (37%), Positives = 151/292 (51%), Gaps = 17/292 (5%)

Query: 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLS 247
           +GP FIK+P++ VF +        ITL+C A   P P Y W        +L  + ID   
Sbjct: 24  QGPVFIKEPSNSVFHVGSED--KKITLNCEARSNPAPHYRW--------QLNGSDIDTSL 73

Query: 248 DKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEI 306
           D R+ L+GGNL++ +P +  D GSY C A+N  G+I+S   +L F ++  F  + R+   
Sbjct: 74  DHRYKLNGGNLVVINPNRNWDTGSYQCFATNSIGTIVSREAKLQFAYLENFKTRIRSTVS 133

Query: 307 GNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYD-GALYFSALEQIDAGN 365
             +  G  + C PP +   ++Y W  + +P+FVEED R FVS + G LY + +E  D GN
Sbjct: 134 VREGQGVVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGN 193

Query: 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL--KFPNNFPKTFPEAPKAGDKVRLECVA 423
           Y+C V S V++    G   PL +       +   K    FP+T P A   G  V+LEC A
Sbjct: 194 YTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAA--KGSTVKLECFA 251

Query: 424 FGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR 474
            G PVP  NW R  G P P       FN +L IPN + ED G Y C A N R
Sbjct: 252 LGNPVPQINWRRSDGMPFPNKIKLRKFNGVLEIPNFQQEDTGSYECIAENSR 303



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 114/278 (41%), Gaps = 36/278 (12%)

Query: 506 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 563
           +T  CEA   P   Y W  NG  +++         RY +    L +  +NP R  D   Y
Sbjct: 46  ITLNCEARSNPAPHYRWQLNGSDIDTSL-----DHRYKLNGGNLVV--INPNRNWDTGSY 98

Query: 564 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 619
           QC A N + T  S  A+L+   L+ +FK R + S     EG  V + C P          
Sbjct: 99  QCFATNSIGTIVSREAKLQFAYLE-NFKTR-IRSTVSVREGQGVVLLCGPPPHSGELSYA 156

Query: 620 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 674
           +V+ +  + +    RR +  E G+L I+ V   D G Y+C    T TN   +      ++
Sbjct: 157 WVFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTVTNARVLGSPTPLVL 216

Query: 675 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 727
              G      P    Q P  +  A    ++L C A    +  +      N  R   M   
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQI------NWRRSDGMPFP 270

Query: 728 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 765
           N+++    N   G+LEI N    D G YEC+ +++ GK
Sbjct: 271 NKIKLRKFN---GVLEIPNFQQEDTGSYECIAENSRGK 305



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 12/188 (6%)

Query: 582 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFE 639
           +L   P F K P  S  + G E   +T+ C   + P P + W+ +G+ I +    R    
Sbjct: 21  LLLQGPVFIKEPSNSVFHVGSEDKKITLNCEARSNPAPHYRWQLNGSDIDTSLDHRYKLN 80

Query: 640 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 697
            GNL++   +R+ D+G Y C ATN  G   S+  +L   +  ++  ++   +++   + +
Sbjct: 81  GGNLVVINPNRNWDTGSYQCFATNSIGTIVSREAKLQFAYLENFKTRIRSTVSVREGQGV 140

Query: 698 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 755
            L C    H+ EL   +Y W  N        + E     ++ + G L I     +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWVFNEYP---SFVEEDSRRFVSQETGHLYIAKVESSDVGNY 194

Query: 756 ECVVKSTV 763
            CVV STV
Sbjct: 195 TCVVTSTV 202


>gi|334348524|ref|XP_003342070.1| PREDICTED: neuronal cell adhesion molecule [Monodelphis domestica]
          Length = 1205

 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 218/873 (24%), Positives = 347/873 (39%), Gaps = 116/873 (13%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+                +  +D+  P  I R     + P D + D  +     +I
Sbjct: 20  ILFLCQVM-----------SALEVPLDLVQPPTITR-----QSPKDYIIDPRE-----NI 58

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV  L +           G L+I+   + + 
Sbjct: 59  EIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPN----------SGTLVISITIEGKA 108

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++  +I     G+++          
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILK-GQSLVLPCRPPLGL 167

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 168 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 226

Query: 383 FFPLKV-------------FPHSNFQQLK-FPNNFPKTFPEAPKAGDK-------VRLEC 421
              +KV                S F   K +    PK      +   K       + LEC
Sbjct: 227 PISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLTPEGRTSHKEELRENVLSLEC 286

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P PS NWT+    LP N  +++NF + L I +V   D G+Y C A N    +E +
Sbjct: 287 IAEGLPTPSINWTKEDGELPINRTFYKNFKKTLNIIHVSEADSGKYKCTARNSLGFVEHT 346

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           ++++++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 347 ISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLINGVPI--EMAP-DDPS 403

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           R    D +L       E   A+YQC A N+     ++A + VL   P      ++     
Sbjct: 404 RKIDGDTILFSDVQ--ESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTE-VDLRYQV 460

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
                  + C    +P P   W K   G+++         +NG L I    +D +  Y+C
Sbjct: 461 ITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQEN-TYVFHDNGTLEIPVAQKDSADTYTC 519

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
              N  GM ++   L V       +Q   KI     R +   C+   +  L     W   
Sbjct: 520 VVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VSFECTVKHDPTLIATLTWLK- 577

Query: 719 GVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
                  D  EL  PN    +ID   L I N S  D   Y CV  +++  +S    + V 
Sbjct: 578 -------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 628

Query: 776 GP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TW 823
           G           P  P  +++    + S  + W  G  N  PIT + I     ++    W
Sbjct: 629 GKTPTPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIW 688

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
            + ++ V G +          + E  L P+  Y F+VIA N +G   PS  S  Y T A 
Sbjct: 689 HHQTD-VPGIQ---------TTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAA 738

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYG 942
           +P + P+ + G G +  +L I+W+PL     N P + YK+ WR+K+ D E+ S  +    
Sbjct: 739 EPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---A 795

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           NV   +V     F    Y VKVQA+N+VG  PE
Sbjct: 796 NVSKYIVSGTPTF--VPYLVKVQALNNVGFAPE 826


>gi|340712319|ref|XP_003394709.1| PREDICTED: protein sidekick-like [Bombus terrestris]
          Length = 2169

 Score =  182 bits (462), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 207/812 (25%), Positives = 324/812 (39%), Gaps = 75/812 (9%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P F  QP+     LS+        L C A G P P Y+WFK+             PLS++
Sbjct: 38  PRFTTQPSSSGNILSENRTK---FLQCQARGNPQPKYKWFKDGV-----------PLSNE 83

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
               S     I   R+ ED G YHC A+N  GSI SE +  A  ++G F       +  +
Sbjct: 84  --LTSEPYFRIQSTRR-EDAGVYHCVATNDVGSIFSERITFAVAYMGVFEDLTERMVSVK 140

Query: 310 NWGKAMFCDPPT-NYPGVNYYWARDYFPNFVEEDKRV----FVSYDGALYFSALEQIDAG 364
           +   A+   PP  ++P  +  W       F  +   +    + S    L      + D G
Sbjct: 141 SGSAAVLTLPPIESHPAPDVTW-------FTSDGSLLYGIKYASVHHTLLILNASENDQG 193

Query: 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424
            Y     +       N PFF L+V   +N +        P+   +  K  D   + C+A 
Sbjct: 194 LYRARAINTQLGKEENSPFFKLQVTGDANAEVAPSIIVKPQDT-QIIKDQDVTYIHCIAN 252

Query: 425 GYPVPSYN--WTRRGSPLPRN----AYFENFNRILTIPNVKVEDQGEYICRA---SNDRS 475
              +      WT+ G P+  +    ++ +++NR L + +  +   G Y C     S    
Sbjct: 253 ARSLHELRTLWTKDGIPIENSRISYSFNDSWNRTLALISANITYTGVYSCHVDLRSGGYP 312

Query: 476 ALESSVTISIQAEPNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534
            + +S  + +  +P F   L  + + D  + +T  C+A GVP    +WFRN E ++   L
Sbjct: 313 TVNASANVVVYEKPTFITELKRETLSDYGSTVTLPCDAVGVPPPKITWFRNAEPVD-HLL 371

Query: 535 PLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593
                 RY + +D  LTI+ L  + D  M+QC A N      S   L+  T  P  +  P
Sbjct: 372 GF----RYALEEDGSLTIKKLTMD-DSGMFQCLASNDAGEASSYTWLKAKTSGPIMENGP 426

Query: 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDD 652
            +++T   +G + T+ CN  AAP P   W  +  I +   GR ++ +NG+LLI+ V  +D
Sbjct: 427 -QNQTIL-DGKDATLTCNAVAAPIPNTTWIYNDTIPVEIAGRVQVLDNGDLLIAAVKPND 484

Query: 653 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEELL 709
           +G Y+C   N  G       L VL      +  PP    + +     LQ + S     L 
Sbjct: 485 AGKYTCIRANEAGSVNGSAYLTVLVRTQIIQ--PPVDTSVLLGYTAELQCKVSNDPSVLY 542

Query: 710 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769
           D+A  W HN   I       ++  N     G LEI     +D GEY C V S  G  +  
Sbjct: 543 DIA--WFHNSQVINTQASQRVKMRN----DGTLEIAAVRASDVGEYMCSVVSPGGNETRS 596

Query: 770 TTVIVEGPPGLPGGVQVVEVHKTS---ATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 826
             + V   P  P  V    V + S     + W  G     P   + +  R   +      
Sbjct: 597 ARLSVIELPFAPINVMASRVERISPRTINVSWVPGFDGNSPTKKFIVQRREVSDLGPIPD 656

Query: 827 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
           S      E +  + +    + N L   + Y+F+V A N +G G PS PS     P + P 
Sbjct: 657 SALNWITECNNVSAQNRWVLLNNLKAAAAYQFRVTAENSVGEGPPSDPSNVVVLPQEPPS 716

Query: 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY-----YKIFWRKKNDTEFQSETLKEY 941
             P    G      ++   W+ LP E+    +I      Y+++    N    Q+ T +  
Sbjct: 717 GPPVGFVGSARSSSEIITQWQ-LPLEEYRNGHILGYVLRYRLYGYSDNPWTIQNITNEAQ 775

Query: 942 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            N  I  +       + +Y V++ A ND G G
Sbjct: 776 RNYLITDL-----ITWKDYIVQIAAYNDKGVG 802



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 19/224 (8%)

Query: 754  EYECVVKSTVGKISTKTTVIVEGP----PGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 809
            ++E V  ++VG       VI  G     P  P  + +  +   S  +Q+T G      I 
Sbjct: 996  KFEVVAWTSVGPGKPAVAVIQSGVEPVLPEPPTKLALSNIDAFSVVLQFTPGFDGNSSII 1055

Query: 810  HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELG 867
             + + A+T  N+TW+N+ E              +AS   V  L+P+  Y+ ++IA N +G
Sbjct: 1056 KWTVQAQTTRNTTWYNIYE----------VSDPDASTITVGGLIPFMQYKLRLIANNVVG 1105

Query: 868  YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 927
              +PS P+ ++ T    P   P  +        +L + W PL + +       Y + + +
Sbjct: 1106 ASQPSEPTKEFQTIQAPPSHPPRNVTVRAMSATELRVRWIPLQQIEWYGNPRGYNVTYTE 1165

Query: 928  KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
                + +S T++++      +  +     Y  Y++ +QA+NDVG
Sbjct: 1166 VRTNKSKSITIEDHTANSYILENMEE---YALYKIVMQALNDVG 1206



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 770  TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
            TT   EG P  P  + V +   +S  +QWT+GA+   PI  Y I  R   +S W  +   
Sbjct: 1825 TTGPQEGSPMAPSNLAVTKT-VSSVELQWTNGASGKGPILGYYIETRRKDDSRWQTIVRS 1883

Query: 830  VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
              G  +  Y+     S +N L+P ++Y F+VI+ N  G   P+  +    TP+
Sbjct: 1884 SNGP-LTEYS----VSYQN-LLPSTSYLFRVISYNRYGISYPAYSTETILTPS 1930



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 645
           +P F  +P  S     E     + C     P+PK+ W KDG  + +    ++       I
Sbjct: 37  EPRFTTQPSSSGNILSENRTKFLQCQARGNPQPKYKWFKDGVPLSN----ELTSEPYFRI 92

Query: 646 SPVSRDDSGIYSCTATNVHG 665
               R+D+G+Y C ATN  G
Sbjct: 93  QSTRREDAGVYHCVATNDVG 112



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 76/198 (38%), Gaps = 13/198 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            E  PG P  V   +V  T+A I W         I  YK++   N      N  +H   KE
Sbjct: 1321 EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEILAYKVMFHLN------NSQDHQFSKE 1374

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
               +           L P   Y F V A   LG+G+ +          ++P Q+PS    
Sbjct: 1375 ---FPASDRTFRATGLEPEKYYMFSVTAQTRLGWGKTAYALVFTTNNRERP-QSPSMPQI 1430

Query: 895  GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 954
               +I    I++   P     AP  YY +  + +N   FQ  T+ E     +        
Sbjct: 1431 SRSQIQSRQITFNWTPGRDGFAPLRYYTV-QQSENSGPFQ--TIPERVEPTLTSYTANDL 1487

Query: 955  FYYTEYEVKVQAINDVGP 972
              +T Y+ ++QA ND+GP
Sbjct: 1488 KPFTFYQFRIQATNDIGP 1505


>gi|334348522|ref|XP_001362906.2| PREDICTED: neuronal cell adhesion molecule isoform 2 [Monodelphis
           domestica]
          Length = 1256

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 218/873 (24%), Positives = 347/873 (39%), Gaps = 116/873 (13%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+                +  +D+  P  I R     + P D + D  +     +I
Sbjct: 20  ILFLCQVM-----------SALEVPLDLVQPPTITR-----QSPKDYIIDPRE-----NI 58

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV  L +           G L+I+   + + 
Sbjct: 59  EIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPN----------SGTLVISITIEGKA 108

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++  +I     G+++          
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILK-GQSLVLPCRPPLGL 167

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 168 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 226

Query: 383 FFPLKV-------------FPHSNFQQLK-FPNNFPKTFPEAPKAGDK-------VRLEC 421
              +KV                S F   K +    PK      +   K       + LEC
Sbjct: 227 PISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLTPEGRTSHKEELRENVLSLEC 286

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P PS NWT+    LP N  +++NF + L I +V   D G+Y C A N    +E +
Sbjct: 287 IAEGLPTPSINWTKEDGELPINRTFYKNFKKTLNIIHVSEADSGKYKCTARNSLGFVEHT 346

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           ++++++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 347 ISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLINGVPI--EMAP-DDPS 403

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           R    D +L       E   A+YQC A N+     ++A + VL   P      ++     
Sbjct: 404 RKIDGDTILFSDVQ--ESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTE-VDLRYQV 460

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
                  + C    +P P   W K   G+++         +NG L I    +D +  Y+C
Sbjct: 461 ITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQEN-TYVFHDNGTLEIPVAQKDSADTYTC 519

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
              N  GM ++   L V       +Q   KI     R +   C+   +  L     W   
Sbjct: 520 VVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VSFECTVKHDPTLIATLTWLK- 577

Query: 719 GVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
                  D  EL  PN    +ID   L I N S  D   Y CV  +++  +S    + V 
Sbjct: 578 -------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 628

Query: 776 GP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STW 823
           G           P  P  +++    + S  + W  G  N  PIT + I     ++    W
Sbjct: 629 GKTPTPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIW 688

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
            + ++ V G +          + E  L P+  Y F+VIA N +G   PS  S  Y T A 
Sbjct: 689 HHQTD-VPGIQ---------TTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAA 738

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYG 942
           +P + P+ + G G +  +L I+W+PL     N P + YK+ WR+K+ D E+ S  +    
Sbjct: 739 EPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---A 795

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           NV   +V     F    Y VKVQA+N+VG  PE
Sbjct: 796 NVSKYIVSGTPTF--VPYLVKVQALNNVGFAPE 826


>gi|334348520|ref|XP_001362822.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Monodelphis
           domestica]
          Length = 1298

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 218/873 (24%), Positives = 347/873 (39%), Gaps = 116/873 (13%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+                +  +D+  P  I R     + P D + D  +     +I
Sbjct: 20  ILFLCQVM-----------SALEVPLDLVQPPTITR-----QSPKDYIIDPRE-----NI 58

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV  L +           G L+I+   + + 
Sbjct: 59  EIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVKMLPN----------SGTLVISITIEGKA 108

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG 325
               G Y C A N+ G+ IS ++ +       +  ++  +I     G+++          
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEQITILK-GQSLVLPCRPPLGL 167

Query: 326 VN--YYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
                +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 168 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 226

Query: 383 FFPLKV-------------FPHSNFQQLK-FPNNFPKTFPEAPKAGDK-------VRLEC 421
              +KV                S F   K +    PK      +   K       + LEC
Sbjct: 227 PISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLTPEGRTSHKEELRENVLSLEC 286

Query: 422 VAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P PS NWT+    LP N  +++NF + L I +V   D G+Y C A N    +E +
Sbjct: 287 IAEGLPTPSINWTKEDGELPINRTFYKNFKKTLNIIHVSEADSGKYKCTARNSLGFVEHT 346

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           ++++++A P +     +  +    D T  C A G P    SW  NG  +  E  P +D  
Sbjct: 347 ISVTVKAAPYWITAPRNLVLSPGEDGTLICRANGNPKPNISWLINGVPI--EMAP-DDPS 403

Query: 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
           R    D +L       E   A+YQC A N+     ++A + VL   P      ++     
Sbjct: 404 RKIDGDTILFSDVQ--ESSSAVYQCNASNEYGYLLANAFVNVLAEPPRILTE-VDLRYQV 460

Query: 601 GEGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658
                  + C    +P P   W K   G+++         +NG L I    +D +  Y+C
Sbjct: 461 ITDRPAMLDCAFFGSPIPTIEWFKGTKGSVLQEN-TYVFHDNGTLEIPVAQKDSADTYTC 519

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
              N  GM ++   L V       +Q   KI     R +   C+   +  L     W   
Sbjct: 520 VVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VSFECTVKHDPTLIATLTWLK- 577

Query: 719 GVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
                  D  EL  PN    +ID   L I N S  D   Y CV  +++  +S    + V 
Sbjct: 578 -------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAMLRVV 628

Query: 776 GP----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STW 823
           G           P  P  +++    + S  + W  G  N  PIT + I     ++    W
Sbjct: 629 GKTPTPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEYEDAFHEPGIW 688

Query: 824 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
            + ++ V G +          + E  L P+  Y F+VIA N +G   PS  S  Y T A 
Sbjct: 689 HHQTD-VPGIQ---------TTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAA 738

Query: 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYG 942
           +P + P+ + G G +  +L I+W+PL     N P + YK+ WR+K+ D E+ S  +    
Sbjct: 739 EPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---A 795

Query: 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975
           NV   +V     F    Y VKVQA+N+VG  PE
Sbjct: 796 NVSKYIVSGTPTF--VPYLVKVQALNNVGFAPE 826


>gi|334333316|ref|XP_001367462.2| PREDICTED: protein sidekick-1 [Monodelphis domestica]
          Length = 2134

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 175/723 (24%), Positives = 291/723 (40%), Gaps = 48/723 (6%)

Query: 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN 327
           D G Y C   N+ G+++    ++   ++G F      +   Q     +      +YP   
Sbjct: 80  DAGFYRCVVRNRMGALLQRKSEVQVAYMGNFIDADQRKTVFQGGAAVLNLPHIISYPRPQ 139

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
             W RD   + +    R+ ++ +  L   A    D G Y     ++ +   +  PF  L 
Sbjct: 140 VTWFRDG--HKIIPSSRIAITLENQLVILATTAGDTGGYYVQAVNEKNGENKTSPFTYLS 197

Query: 388 VFPHSNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRRGSPLPRNA 444
           +   S+   +  P    P           +V LEC+A   P+   S  W R G  +    
Sbjct: 198 IESESDTPDIMAPVIVIPPGNTSVVAGTSEVTLECIANARPIEELSMTWKRNGVKITNG- 256

Query: 445 YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT---ISIQAEPNFTIPLTDK--- 498
              N  R LTI N    D G YIC A    +  E + T   +SI   P FT    ++   
Sbjct: 257 -LHNLGRRLTITNPTSSDIGMYICEAELKGTNFEPARTKAFLSIIEPPYFTAEPENRILA 315

Query: 499 HMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 558
            ++   D+T  C+A GVP     W+++   ++     L +     +    L I+ L+P+ 
Sbjct: 316 QVEKTVDIT--CQAMGVPVPNLEWYKDSVPISK----LRNSRYKVLVSGGLRIQKLHPD- 368

Query: 559 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 618
           D  ++QC A+N+     +   L V  + P+F  RP++  T   +G    + C    APKP
Sbjct: 369 DSGIFQCFARNEGGEIETHTYLDVTNIAPTFTLRPVD--TTVTDGMTAMLTCEVSGAPKP 426

Query: 619 KFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 674
              W++   I+ SG     R  + E+G L I+PV   D+G Y+C A N  G   +   L 
Sbjct: 427 AITWRRGKQILASGSVQIPRFILLESGGLQITPVFLQDAGNYTCYAVNSEGSLNAFAMLT 486

Query: 675 VLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 733
           V +    +   PP+  T+       L C A  +  + + Y+W  + + I     + +   
Sbjct: 487 VWN--RTFIVFPPEDRTVIKGTTATLHCGAIHDPRIPIRYVWKKDNIVINPATSSRIV-- 542

Query: 734 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHK 791
            +  DG LL I+     D G+Y C V S  G  S    + V   P  P  +   +   H 
Sbjct: 543 -VEKDGSLL-ISQTWSGDIGDYTCEVISEGGNDSRMARLEVIELPHSPQNLLASLNSSHS 600

Query: 792 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 851
            +  + W        P+ +Y I+  +  NS W  V    +  E+   T          L 
Sbjct: 601 RTVMLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSNVDPEMTSVTVSG-------LT 651

Query: 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 911
           P  TY+F+V A N++G G+ S+ + +   P + P   P  I   G     + + W+P P 
Sbjct: 652 PARTYQFRVCAVNQVGKGQHSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPE 711

Query: 912 EKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 970
            + N     Y + +R      E+Q   +    +  I    +     +T+YE++V A N  
Sbjct: 712 TEHNGVLHGYILRYRLAGLPGEYQHRNIT---SPEINYCLVKDLIIWTQYEIQVAAYNGA 768

Query: 971 GPG 973
           G G
Sbjct: 769 GLG 771



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QW +G    RP T Y I AR +    W      +  K+
Sbjct: 1817 EGSPGSPRDVLVTK-SASELTLQWMEGNPGDRPTTGYIIEARPSDEGLW-----DMFVKD 1870

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R        ++  L    TYEF+V+A N+ GYGEPSSPS   +  ++ P+
Sbjct: 1871 IPRSATSYTVGLDK-LRQGVTYEFRVVAVNDFGYGEPSSPSVAVSAQSETPF 1921



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 24/217 (11%)

Query: 154 LFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDIT 213
           ++ICEA ++  ++     RT  +   IE P       YF  +P + +    ++++  DIT
Sbjct: 276 MYICEAELKGTNF--EPARTKAFLSIIEPP-------YFTAEPENRILAQVEKTV--DIT 324

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPRQVEDRGSY 272
             C A G P P+ EW+K+           I  L + R+  L  G L I      +D G +
Sbjct: 325 --CQAMGVPVPNLEWYKDSVP--------ISKLRNSRYKVLVSGGLRIQK-LHPDDSGIF 373

Query: 273 HCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP-TNYPGVNYYWA 331
            C A N+ G I + +          F L+             + C+      P + +   
Sbjct: 374 QCFARNEGGEIETHTYLDVTNIAPTFTLRPVDTTVTDGMTAMLTCEVSGAPKPAITWRRG 433

Query: 332 RDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSC 368
           +    +   +  R  +   G L  + +   DAGNY+C
Sbjct: 434 KQILASGSVQIPRFILLESGGLQITPVFLQDAGNYTC 470



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 84/213 (39%), Gaps = 36/213 (16%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 843
            EV   S  +QW  G+    PI ++ +    + R  W +   ++S       ++R      
Sbjct: 1406 EVTSRSLQLQWVPGSDGSSPIRYFTVQIRELPRGEWQTYSSSISHEATAHVIER------ 1459

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
                  L P+++Y+ ++ A N++G  + S+ +    T  D P + P+ +         + 
Sbjct: 1460 ------LNPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPNCVSVTPHTTSSVL 1513

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEY------GN 943
            + W+P   E  N   + Y+I++R+              KN +  ++E   +        +
Sbjct: 1514 VQWQPPRDESLNGLLVGYRIYYRELEYETGPGTESKTVKNPSALRAELTPQSSFKTVNSS 1573

Query: 944  VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976
              +    +     Y  YEV + A N +G  P S
Sbjct: 1574 SALTTYELTHLKKYKRYEVIMTAYNIIGESPAS 1606



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 95/245 (38%), Gaps = 56/245 (22%)

Query: 768  TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 823
            T+    ++  PG P     V  H TS+  +QW    D + NG  +  Y+I         +
Sbjct: 1485 TEAVTTLQDVPGEPPNCVSVTPHTTSSVLVQWQPPRDESLNGL-LVGYRI---------Y 1534

Query: 824  FNVSEHVIGKEVDRYTGRKEASIENVLVPWST-----------------------YEFKV 860
            +   E+  G   +  T +  +++   L P S+                       YE  +
Sbjct: 1535 YRELEYETGPGTESKTVKNPSALRAELTPQSSFKTVNSSSALTTYELTHLKKYKRYEVIM 1594

Query: 861  IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920
             A N +G    S+P   +   A  P  AP  I         L + W+P P E QN     
Sbjct: 1595 TAYNIIGESPASAPVEVFVGEA-APAMAPQNIQVNPLTASQLEVIWDPPPVESQNGIIQG 1653

Query: 921  YKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
            YKI++     +NDTE     F  ET+          VR+ +   +T+Y V + A N  G 
Sbjct: 1654 YKIYYWEADSQNDTENMKVLFLPETM----------VRLKNLTSHTKYLVSISAFNAAGD 1703

Query: 973  GPESE 977
            GP+SE
Sbjct: 1704 GPKSE 1708


>gi|322789992|gb|EFZ15068.1| hypothetical protein SINV_01431 [Solenopsis invicta]
          Length = 2135

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 202/805 (25%), Positives = 325/805 (40%), Gaps = 61/805 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           P F  QP+     LS+        L C A G P P Y+WFK              PL+++
Sbjct: 6   PRFTNQPSSSGNILSENRTK---FLQCQARGNPQPKYKWFKNGM-----------PLNNE 51

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
               SG    I+  R+ ED G YHC A+N  GSI S+ +  A  ++G F+      +  +
Sbjct: 52  --LTSGPYFRIHSTRR-EDAGVYHCVATNDVGSIFSDRLAFAVAYMGTFDDLTEKVVTVE 108

Query: 310 NWGKAMFCDPPT-NYPGVNYYW-ARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYS 367
           +   A+   PP  ++P  +  W + D  P +     +   ++   +  +A E  D G Y 
Sbjct: 109 SGSAAILELPPIESHPIPDVTWFSSDGTPLY---GIKYATTHHTLIILNASEN-DEGTYR 164

Query: 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYP 427
               +         PFF L+V    N +        P+   +  K  D   + C+A    
Sbjct: 165 AKAINTQLGKEEISPFFKLQVTGDPNAEVAPTIIVKPQDT-QIVKDQDVTHINCIANARS 223

Query: 428 VPSYN--WTRRGSPLPRN----AYFENFNRILTIPNVKVEDQGEYICRA---SNDRSALE 478
           +      W + G P+  +    ++ +++NR L + +  +   G Y C     S     + 
Sbjct: 224 LHELRTLWMKDGIPIENSRISYSFNDSWNRTLALISANITYTGIYSCHVDLRSGGYPIVN 283

Query: 479 SSVTISIQAEPNFTIPLTDKHM-DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE 537
           +S  I +  +P F   L  + + D  + +T  C+A GVP  T +WFRN E ++       
Sbjct: 284 ASAKIVVYEKPTFITELKRETLSDYGSTVTLPCDANGVPSPTITWFRNAEPVDHLL---- 339

Query: 538 DQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 596
              RY I +D  LTI+ L  + D  M+QC A N+     S   L+  T  P  +  P   
Sbjct: 340 -GTRYVIEEDGSLTIKKLTMD-DSGMFQCLASNEAGESSSYTWLKAKTSGPIMENGPQNL 397

Query: 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGI 655
                +G + T+ CN  AAPKP   W  +  I +   GR ++ +NG+LLI+ V   D+G 
Sbjct: 398 TVL--DGKDATLSCNAIAAPKPNATWYYNDMIPVEIAGRVQVLDNGDLLIAAVKSYDAGK 455

Query: 656 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 715
           Y+C   N  G       L V+       Q P   ++   R  +L+C    +  +     W
Sbjct: 456 YTCIRANEAGSVNGSAYLTVMVRTQII-QPPVDTSVLLGRTAELQCKVSNDPSVVYDMAW 514

Query: 716 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            HNG  I       ++  +     G LEI     +D GEY C V S  G  +    + V 
Sbjct: 515 FHNGQVINTQASQRVKMRS----DGTLEIVTVRASDVGEYTCSVVSPGGNETRSARLSVI 570

Query: 776 GPPGLPGGVQVVEVHKTS---ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 832
             P  P  V    V + S     + W  G     P    K I +    S    + + ++ 
Sbjct: 571 ELPFPPINVVATRVERISPRTINVTWVPGFDGNSPTK--KFIVQRREVSDLGPIHDPILN 628

Query: 833 --KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 890
              E D  +      + N L   ++Y+F+V A N +G G  S+ S     P + P   P 
Sbjct: 629 WVTERDNVSATSRWVLLNNLKAAASYQFRVSAENSVGEGPSSAASNIVVLPQEPPSGPPI 688

Query: 891 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAV 948
              G      ++   W+P   E +N   + Y + +     ND+ +   T++   N     
Sbjct: 689 GFVGSARSSSEIITQWQPPLEEYRNGHILGYILRYTLFGYNDSPW---TMQNITNEAQRN 745

Query: 949 VRIPSEFYYTEYEVKVQAINDVGPG 973
             I     + +YEV++ A N+ G G
Sbjct: 746 YLITDLITWKDYEVQIAAYNEKGVG 770



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 20/265 (7%)

Query: 714  IWTHNGVRIGNMDL-NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772
            I TH  ++    D+ + L   N   D    ++ +       ++E    ++VG    K   
Sbjct: 923  ILTHYQLKYMIKDIPDSLRVENFTADVLSTKVEHLQALTHYKFEVTAWTSVGPGRAKIAT 982

Query: 773  IVEGP----PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 828
            I  G     P  P  + +  +   S  +Q+T G      IT + + A+T  NSTW+ + E
Sbjct: 983  IQSGVEPVLPEPPTKLALSNIDAFSIVLQFTPGFDGNSSITKWTVEAQTARNSTWYIIYE 1042

Query: 829  HVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
                          +AS   V  L P+  Y+ ++IA N +G  +PS P+ ++ T    P 
Sbjct: 1043 ----------VSDPDASTITVGGLTPFMQYKLRLIANNVVGASQPSEPTKEFQTIQAPPS 1092

Query: 887  QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946
              P  +        +L + W PL + +       Y + + +      +S  ++++     
Sbjct: 1093 HPPKNVTVRAMSATELRVRWIPLQQIEWYGNPRGYNVTYTEVRSNISKSSIIEDHTANSY 1152

Query: 947  AVVRIPSEFYYTEYEVKVQAINDVG 971
             +  +     Y +YE+ +QA NDVG
Sbjct: 1153 VLENMEE---YADYEIVMQAFNDVG 1174



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 770  TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 829
            TT   EG P  P  + V +   +S  +QWT+GA+   PI  Y I  R   +S W  +   
Sbjct: 1793 TTGPQEGSPMEPSNLSVTKT-VSSVELQWTNGASGKGPILGYYIETRRKDDSRWQTIIRT 1851

Query: 830  VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882
              G  +  YT     S +N L+P ++Y F+VI+ N  G   P+  +    TP+
Sbjct: 1852 SNGP-LTEYT----VSYQN-LLPSTSYLFRVISYNRYGISYPAYSTETILTPS 1898


>gi|395818872|ref|XP_003782836.1| PREDICTED: neuronal cell adhesion molecule [Otolemur garnettii]
          Length = 1285

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 222/875 (25%), Positives = 355/875 (40%), Gaps = 119/875 (13%)

Query: 153 LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDI 212
           +LF+C+  I  L   L D +  +   D+  P  I +     + P D + D  +     +I
Sbjct: 20  ILFLCQM-ISALEVPL-DPKLLE---DLVQPPTITQ-----QSPKDYIIDPRE-----NI 64

Query: 213 TLSCYAGGYPNPSYEWFKE----DYVQDRLVANLIDPLSDKRFTLSGGNLIIN---DPRQ 265
            + C A G P PS+ W +     D  +D LV   + P S        G L+IN   + + 
Sbjct: 65  VIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVT--MKPGS--------GTLVINIMSEGKA 114

Query: 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMF--CDPPTNY 323
               G Y C A N+ G+ IS ++ +       +  ++   I  +N G+++   C PP   
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQSLVLPCRPPIGL 173

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFS-ALEQIDAGNYSCNVQSKVSDTGRNGP 382
           P    +W  + F   + + +RV    +G LYFS  L +    +Y C  +   + T +   
Sbjct: 174 PPPIIFWMDNSF-QRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQ 232

Query: 383 FFPLKV-------------FPHSNFQQLKFPNNFPKTF--PEAPKA------GDKVRLEC 421
              +KV                + F   K     P TF  PE   +      G+ + LEC
Sbjct: 233 PISVKVISVDELNDTIAANLSDTEFYSAKSSRERPPTFLTPEGNASNKEELRGNVLSLEC 292

Query: 422 VAFGYPVPSYNWTRRGSPLPRNAY-FENFNRILTIPNVKVEDQGEYICRASNDRSALESS 480
           +A G P P  +W +    LP N   ++NF + L I +V   D G Y C A N   A+  +
Sbjct: 293 IAEGLPTPIIHWIKEDGTLPVNRMSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIHHT 352

Query: 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD 540
           ++++++A P + +   +  +    D T  C A G P    SW  NG  +  E  P ED  
Sbjct: 353 ISVTVKAAPYWIMAPQNLVLSPGEDGTLICRANGNPKPRISWLTNG--VPVEISP-EDPS 409

Query: 541 RYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 599
           R    D   TI + N  ER  A+YQC A N+     ++A + VL   P     P  +   
Sbjct: 410 RKIDGD---TIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRILT-PTNTLYQ 465

Query: 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIY 656
                   + C    +P P   W K     GS  R  I+   ENG L I    +D +G Y
Sbjct: 466 VIANRPALLDCAFFGSPLPTIEWFKGTK--GSALREDIYILHENGTLEIPVAQKDSTGTY 523

Query: 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716
           +C A N  GM +++  L +   P+   + P    +     +   C    +  L +   W 
Sbjct: 524 TCVARNKLGMAKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTVTWL 582

Query: 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776
            +   + + D          I+   L I + +  D+G Y CV  +T+  +S    + V  
Sbjct: 583 KDNGELPDDD-------RFTIEKDHLVIADVTDDDSGTYTCVANTTLDNVSASAVLSVVA 635

Query: 777 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN--STWF 824
           P          P  P  +++      S  + WT G  N  PIT + I      +    W 
Sbjct: 636 PTPTPAPVYDVPNPPFDLELTNQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHGAGVWH 695

Query: 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
           + +E V G +    T + + S +       T  +  +A   L                 +
Sbjct: 696 HHTE-VPGTQT---TAQLKLSPKVFHSLQKTKAYTCVAALLL-----------------E 734

Query: 885 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 943
           P + P+ + G G +  +L I+W+PL   + N P + YK+ WR+K+ D E+ S  +    N
Sbjct: 735 PDKNPTAVEGLGTEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 791

Query: 944 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978
           V   +V     F    Y +KVQA+NDVG  PE  V
Sbjct: 792 VSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPAV 824


>gi|390340359|ref|XP_003725223.1| PREDICTED: neuronal cell adhesion molecule-like [Strongylocentrotus
           purpuratus]
          Length = 1282

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 198/832 (23%), Positives = 333/832 (40%), Gaps = 107/832 (12%)

Query: 191 YFIKQPTDVVFDLSKRSILNDITLS--CYAGGYPNPSYEW-FKEDYVQDRLVANLIDPLS 247
           YF  + T       K S++ D +    C+  G P P+  W FK   + +R          
Sbjct: 15  YFPARITSYTPLTRKLSVVEDDSAKFICHVEGRPTPTITWTFKGSVLTNR---------- 64

Query: 248 DKRFTL--SGGNLIINDPRQVEDRGSYHCKASN-KFGSIISESVQLAFG-FIGEFN--LK 301
             ++T+  + G+L+IN+ ++V D G Y C+A N ++      +     G  + +F   + 
Sbjct: 65  -DKYTINETEGSLVINNVKKV-DSGEYECRAENGEYHEATGSATLTVLGTLLDDFPPFIV 122

Query: 302 RAPE--IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA-LYFSAL 358
             PE   G+Q     + C      P   YYW +D   +  + D     S DG  L   +L
Sbjct: 123 EQPESVTGDQRIPLTLMCRA-IGIPEPTYYWEKD--GSLFDVDSNDHASLDGGNLVIESL 179

Query: 359 EQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVR 418
              D G Y C  ++++           L   P          ++ P     A +     +
Sbjct: 180 TTADDGQYQCFAKNRLGTAMSQKIRTSLAYLPA--VASAAHLDSHPAASEVAIRT-QSFK 236

Query: 419 LECVAFGYPVPSYNWTRRGSPLPRNA--YFENFNRILTIPNVKVEDQGEYICRASNDRSA 476
           L+C+AFGYP P   W +    L        E   + L I  V++ D+G Y C ASN    
Sbjct: 237 LKCIAFGYPTPVITWKQGEEQLQSGGRVSIEESGQALVISAVEISDEGTYTCVASNTGGD 296

Query: 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPL 536
            E S  +++++ P F  P +++       +   C + GVP  T  W  NG+        +
Sbjct: 297 DEFSTIVTVESSPYFLAPPSNETKGPGESVDIECRSEGVPPPTVEWLVNGQTWADFESNI 356

Query: 537 EDQDRYFI-----QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 591
            D +R+ +     Q   + I  L+   D  ++QC + N+ K   +S  L V++       
Sbjct: 357 -DTERWTVVTGDPQLATIAITNLH-TTDSNLFQCISTNKYKEELASVVLNVVSFPARITS 414

Query: 592 -RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVS 649
             PL       E  +    C+    P P   W   G+++ +G +  I E  G+L+I+ V 
Sbjct: 415 FTPLTRRLSVVEDDSAKFICHSRGRPDPTITWTFKGSVLTNGIKYTINETEGSLVINNVK 474

Query: 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC------SA 703
           + D G Y C A N             + G  Y       +T+ A R    R       +A
Sbjct: 475 KVDGGEYECRAEN------------AIDGEDYEATGSATLTVLASRESISRSIVEAIQAA 522

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763
             E LL                       P     G  L I NA F  +G Y CV+++T+
Sbjct: 523 GPEGLL-----------------------PEGRTRGNSLRIANAHFTHSGTYTCVLEATI 559

Query: 764 GK-------ISTKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWTDGATNGRPITHYKIIA 815
            +       ++    +IV+G P  P  + ++   +  A  + W  G  N  PI +Y I  
Sbjct: 560 DESAATVHSVNASAQLIVKGRPESPRILMLLAKEQEFAMDLFWEPGNDNNAPIQYYIIQY 619

Query: 816 RTNW-NSTW-FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 873
            T W +  W F  +E   G  + R            L P+  Y F+VIA NE+G  EPS+
Sbjct: 620 DTKWADMHWQFQANETSGGLAIYRKV--------LYLQPFVDYRFRVIAVNEIGESEPSA 671

Query: 874 P-SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932
             +P +N     P   PS + G   +   + I W+ +        + +Y++ +R +  +E
Sbjct: 672 EVAPTFNPQVAPPSVNPSGVSGSSTRPESMVIRWQAIHPFYYGGDDFHYEVAYRPRISSE 731

Query: 933 -FQSETL--KEYGNVGIAVVR---IPSEFYYTEYEVKVQAINDVGPGPESEV 978
            F  +T+  +   +    +++   + +     E+E  V+++N  GPGPE E+
Sbjct: 732 PFTKDTVYPENTDDNPTGIIQNYIVDASKLCEEFEFSVRSMNSGGPGPEPEI 783



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 14/188 (7%)

Query: 798 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 857
           W  G  N  PI +Y I   T W    +    +     +  Y  RK   ++    P+  Y 
Sbjct: 815 WEPGNDNNAPIQYYIIQYDTKWADLHWQFQANETASGLATY--RKVLYLQ----PFVDYR 868

Query: 858 FKVIAGNELGYGEPSSPSPQYNTPADKPYQA-PSRIGGGGGKIGDLSISWEPLPREKQNA 916
           F+VIA NE+G  EPS+       P   P    PS + G       + I W+ +       
Sbjct: 869 FRVIAVNEIGESEPSAEVASGVDPQVAPPSINPSGVNGSTTPTSTV-IRWQAIHPFYYGG 927

Query: 917 PNIYYKIFWRKKNDTE-FQSETL--KEYGNVGIAVVR---IPSEFYYTEYEVKVQAINDV 970
            + +Y++ +R +  +E F  +++  +   +    +++   + +     E+E  V+++N  
Sbjct: 928 DDFHYEVAYRPRLSSEPFTKDSVYPENTDDNPTGIIQNYIVDASKLCEEFEFSVRSMNSE 987

Query: 971 GPGPESEV 978
           GPGPE E+
Sbjct: 988 GPGPEPEI 995


>gi|301762171|ref|XP_002916515.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1-like [Ailuropoda
           melanoleuca]
          Length = 2143

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 183/798 (22%), Positives = 313/798 (39%), Gaps = 61/798 (7%)

Query: 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDK 249
           PYF  +P      L      N + L+C A G     ++W   D         L    S+ 
Sbjct: 39  PYFKTEPGLPQIHLEG----NRLVLTCLAEGSWPLEFKWMHNDR-------ELTTYTSEY 87

Query: 250 RFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQ 309
           ++ +           Q  D G Y C   N+ G+++    ++   ++G F      +  +Q
Sbjct: 88  KYIIPS--------LQRLDAGFYRCVVRNRMGALLQRRSEVQVAYMGNFMDADQRKTVSQ 139

Query: 310 NWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCN 369
                +   P  + P     W R+   + +    R+ ++ +  L   A    D+G Y   
Sbjct: 140 GHAAVLNLLPIPSCPRPQVTWFREG--HKIIPSNRIAITLENQLVILATTVGDSGAYYAQ 197

Query: 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPN-NFPKTFPEAPKAGDKVRLECVAFGYPV 428
             ++ +   +  P   L +       +   P    P          +++ LEC+A   PV
Sbjct: 198 AVNERNGENKTSPLIHLSIARDVGTPETMAPVIVIPPGNRSVVAGSNEITLECIANARPV 257

Query: 429 PSY--NWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT---I 483
                NW R G  +   +   +F R LTI +    D G Y+C A+   SA  ++     +
Sbjct: 258 EELHVNWKRNGVKV--TSGLHSFGRRLTIGSPTSADTGLYVCEATLRGSAFNAATAEAFL 315

Query: 484 SIQAEPNFTIPLTDKHMDNQAD-LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY 542
           SI   P FT     + +    D +   C+A GVP  T  W+++   + +    L++    
Sbjct: 316 SIIEPPYFTAEPESRMLAEVEDTVDIACQAMGVPLPTLQWYKDAVSIGT----LQNPRYK 371

Query: 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602
            +    L I+ L PE D  ++QC A N+     +   L V  + P+F + P++  T   +
Sbjct: 372 LLSSGGLRIQGLRPE-DSGIFQCFASNEGGEIQTYTYLDVTNVAPAFTQLPVD--TTVTD 428

Query: 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSC 658
           G    + C    APKP   W++  +I+ SG  R     + E+G L I+PV   D+G Y+C
Sbjct: 429 GMTAVLRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTC 488

Query: 659 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 718
            A N  G   +   L V +  S       ++ I     + L C A  +  + + Y+W  +
Sbjct: 489 YAANTEGSLNASAALTVWNRTSIVNPPEDRVVIKGTTAM-LHCGATHDPRITLRYVWKKD 547

Query: 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778
              I     + +    +  DG LL I+     D G+Y C + S  G  S    + V   P
Sbjct: 548 NTVITPSSSSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIISEGGNDSRTARLEVIELP 603

Query: 779 GLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
             P  +   +   H  +  + W        P+ +Y +    N NS W  V    +G E+ 
Sbjct: 604 HSPQNLLASLNSSHSHTVVLSWVRPFDGNSPVLYYIVEVSEN-NSPW-KVHLSNVGPEMT 661

Query: 837 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
               R        L P  TY+F+V A N++G G+ S+ + +   P + P   P  I   G
Sbjct: 662 GVAVRG-------LTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASG 714

Query: 897 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 955
                + + W+P P  + N     Y + +R      E Q   +    +  +    +    
Sbjct: 715 RTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIT---SPEVNYCLVTELI 771

Query: 956 YYTEYEVKVQAINDVGPG 973
            +T+YE++V A N  G G
Sbjct: 772 IWTQYEIQVAAYNGAGLG 789



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            EG PG P  V V +   +  T+QWT+G     P T Y I AR +    W      +  K+
Sbjct: 1835 EGSPGSPRDVLVTK-SASELTLQWTEGNAGRTPTTGYVIEARPSDEGLW-----DMFVKD 1888

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886
            + R       S++  L    TYEF+V+A N+ GYGEPSSPS   +   + P+
Sbjct: 1889 IPRSATSYTVSLDK-LRQGVTYEFRVVAVNQAGYGEPSSPSTAVSAQVETPF 1939



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 115/283 (40%), Gaps = 47/283 (16%)

Query: 714  IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773
            ++  NG R+ +   N  +   I    GLL +T  +   A      V S    ++T +T+ 
Sbjct: 946  VYGRNGSRLTHTLSNTTQEYKIK---GLLSLTTYTIDVAA-----VXSPGAGLATSSTIS 997

Query: 774  VEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 830
               PP LPG    + +  +   SAT+Q+  G      I+ + +  +              
Sbjct: 998  SGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG-----------A 1046

Query: 831  IGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883
            IG E   V  Y    E   + +    L P++ Y F++   N +G    S  S    T   
Sbjct: 1047 IGDEEEWVSLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNVVGASPFSQSSRVIQTLQA 1106

Query: 884  KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKE 940
             P  AP+ I         L + W PLP  + N    ++ Y+I +WR     + Q+  L +
Sbjct: 1107 PPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIGYWRP----DLQAPVLAQ 1162

Query: 941  YGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESE 977
              N      R+  EF       +TEYE+++QA N +G GP SE
Sbjct: 1163 VIND-----RLEREFTIEGLEEWTEYELQMQAFNAIGAGPWSE 1200



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 24/247 (9%)

Query: 738  DGGLLEITNASFADAGEYECVVKSTVGKI----STKTTVIVEGPPGL-PGGVQVVEVHKT 792
            D  +LEI N +      +     + VG      S++    ++ PP + P  + V    +T
Sbjct: 1064 DAQMLEIPNLTPYTHYRFRMRQVNVVGASPFSQSSRVIQTLQAPPDVAPTSITVRTASET 1123

Query: 793  SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 847
            S  ++W    D   NG P +  Y+I   R +  +    V   VI   ++R     E +IE
Sbjct: 1124 SLRLRWVPLPDSQYNGNPESVGYRIGYWRPDLQAP---VLAQVINDRLER-----EFTIE 1175

Query: 848  NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 907
              L  W+ YE ++ A N +G G P S + +  T    P  AP  +         + ++W 
Sbjct: 1176 G-LEEWTEYELQMQAFNAIGAG-PWSETVRGRTRESVPSAAPENVSAEAVSSTQILLTWA 1233

Query: 908  PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966
             +P + QN   + YKI +R K+ D E +S  ++  GN   + + +     +  YE++V A
Sbjct: 1234 LVPEQDQNGLILGYKILFRAKDLDPEPRSHVVR--GNHTQSAL-LAGLRKFVLYELQVLA 1290

Query: 967  INDVGPG 973
               +G G
Sbjct: 1291 FTRIGNG 1297



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 16/144 (11%)

Query: 788  EVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYTGRKE 843
            EV   S  +QW  G+    PI ++ +  R      W +   +VS       V+R      
Sbjct: 1424 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSVSHEATACAVER------ 1477

Query: 844  ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
                  L P+++Y+ ++ A N++G  + S  +    T  D P + PS +         + 
Sbjct: 1478 ------LRPFTSYKLRLKATNDIGDSDFSGETDAVTTLQDVPGEPPSFVSVTPHTTSSVL 1531

Query: 904  ISWEPLPREKQNAPNIYYKIFWRK 927
            I W P   E  N     Y+I++R+
Sbjct: 1532 IQWRPPRDESLNGLLQGYRIYYRE 1555



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 19/129 (14%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE  + A N +G    S+P   +   A  P  AP  I         L ++W+P P E QN
Sbjct: 1608 YELILTAYNIIGESPASAPVEVFVGEA-APAMAPQNIQVTPLTASQLEVTWDPPPPESQN 1666

Query: 916  APNIYYKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 967
                 YK+++     +N+TE     F  ET          VV++ +   +T+Y V + A 
Sbjct: 1667 GNIQGYKVYYWEAGSQNETEKMKVLFLPET----------VVKLKNLTSHTQYLVSISAF 1716

Query: 968  NDVGPGPES 976
            N  G GP+S
Sbjct: 1717 NAAGDGPQS 1725


>gi|66505698|ref|XP_623565.1| PREDICTED: protein sidekick isoform 2 [Apis mellifera]
          Length = 2176

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 201/789 (25%), Positives = 313/789 (39%), Gaps = 74/789 (9%)

Query: 214 LSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYH 273
           L C A G P P Y+WFK+             PLS++    S     I   R+ ED G YH
Sbjct: 66  LQCQARGNPQPKYKWFKDGV-----------PLSNE--LTSEIYYRIQSTRR-EDAGVYH 111

Query: 274 CKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPT-NYPGVNYYWAR 332
           C A+N  GSI SE +  A  ++G F       +  ++   A+   PP  ++P  +  W  
Sbjct: 112 CVATNDVGSIFSERITFAVAYMGLFEDLTERIVSVKSGSAAVLTLPPIESHPAPDVTW-- 169

Query: 333 DYFPNFVEEDKRVF----VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388
                F  +   ++     S    L      + D G Y     +       N PFF L++
Sbjct: 170 -----FTSDGSLLYGIKYASVHHTLLILNASESDQGLYRARAINTQLGKEENSPFFKLQI 224

Query: 389 FPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYN--WTRRGSPLPRN--- 443
              +N +        P+   +  K  D   + C+A    +      WT+ G P+  +   
Sbjct: 225 TGDANAEIAPTIIVKPQDT-QIIKDQDVTYIHCIANARSLHELRTLWTKDGIPIENSRIS 283

Query: 444 -AYFENFNRILTIPNVKVEDQGEYICRA---SNDRSALESSVTISIQAEPNFTIPLTDKH 499
            ++ +++NR L + +  +   G Y C     S +   + +S  + +  +P F   L  + 
Sbjct: 284 YSFNDSWNRTLALISANITYTGVYSCHVDLRSGEYPTMNASAKVVVYEKPMFITELKRET 343

Query: 500 M-DNQADLTWTCEAFGVPDVTYSWFRNGE----LLNSETLPLEDQDRYFIQ-DNVLTIRY 553
           + D  + +T  C+  GVP    +WFRN E    LL S         RY ++ D  LTI+ 
Sbjct: 344 LSDYGSTVTLPCDVVGVPPPKITWFRNAESVDHLLGS---------RYAMEEDGSLTIKK 394

Query: 554 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
           L    D  M+QC A N+     S   L+  T  P  +  P +++T   +G + T+ CN  
Sbjct: 395 LT-MSDSGMFQCLASNEAGEASSYTWLKAKTSGPVMENGP-QNQTIL-DGKDATLTCNAV 451

Query: 614 AAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672
           AAP P   W   D   +   GR ++ +NG+LLI+ V  +D+G Y+C   N  G       
Sbjct: 452 AAPIPNTTWIYNDTMPVEIAGRVQVLDNGDLLIAAVKPNDAGKYTCIRANEAGSVNGSAY 511

Query: 673 LIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
           L VL      +  PP    + +     LQ + S     L D+A  W HN   I       
Sbjct: 512 LSVLVRTQIIQ--PPVDTSVLLGYTAELQCKVSNDPSVLYDIA--WFHNTQVINTQASQR 567

Query: 730 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 789
           ++  N     G LEI     +D GEY C V S  G  +    + V   P  P  V    V
Sbjct: 568 VKMRN----DGTLEIAAVRASDVGEYMCSVVSPGGNETRSARLSVIELPFAPINVMANRV 623

Query: 790 HKTS---ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 846
            + S     + W  G     P   + +  R   +      S      E +  + +    I
Sbjct: 624 ERISPRTINVSWVPGFDGNSPTKKFIVQRREVSDLGPIPDSALNWIIECNNVSAQSRWVI 683

Query: 847 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 906
            N L   + Y+F+V A N +G G PS PS     P + P   P    G      ++   W
Sbjct: 684 LNNLKAAAAYQFRVTAENSVGEGPPSDPSNVVVLPQEPPSGPPVGFVGSARSSSEIITQW 743

Query: 907 EPLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 964
           +    E +N   + Y + +R    ND  +   T++   N       I     + +Y V++
Sbjct: 744 QLPLEEYRNGHILGYVLRYRLYGYNDNPW---TIQNITNEAQKNYLITDLITWKDYIVQI 800

Query: 965 QAINDVGPG 973
            A ND G G
Sbjct: 801 AAYNDKGVG 809



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 19/223 (8%)

Query: 755  YECVVKSTVGKISTKTTVIVEGP----PGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 810
            +E V  +++G       VI  G     P  P  + +  +   S  +Q+T G      I  
Sbjct: 1004 FEVVAWTSIGPGKPAVAVIQSGVEPVLPEPPTKLALSNIDAFSVVLQFTPGFDGNSSIIK 1063

Query: 811  YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGY 868
            + + A+T  N+TW+N+ E              +AS   V  L+P+  Y+ ++IA N +G 
Sbjct: 1064 WTVQAQTTRNTTWYNIYE----------VSDPDASTITVGSLIPFMQYKLRLIANNVVGA 1113

Query: 869  GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928
             +PS P+ ++ T    P   P  +        +L + W PL + +       Y + + + 
Sbjct: 1114 SQPSEPTKEFQTIQAPPSHPPRNVTVRAMSATELRVRWIPLQQIEWYGNPRGYNVTYTEV 1173

Query: 929  NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971
               + +S T++++      +  +     Y  YEV +QA NDVG
Sbjct: 1174 RTKKSKSITIEDHTANSYILENMEE---YALYEVVMQAFNDVG 1213



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 645
           +P F  +P  S     E     + C     P+PK+ W KDG  + +    +I+      I
Sbjct: 44  EPRFTTQPSSSGNILSENRTKFLQCQARGNPQPKYKWFKDGVPLSNELTSEIYYR----I 99

Query: 646 SPVSRDDSGIYSCTATNVHG 665
               R+D+G+Y C ATN  G
Sbjct: 100 QSTRREDAGVYHCVATNDVG 119



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 76/204 (37%), Gaps = 25/204 (12%)

Query: 775  EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834
            E  PG P  V   +V  T+A I W         I  YK++   N      N  +H   KE
Sbjct: 1328 EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEILAYKVMFHLN------NSQDHQFSKE 1381

Query: 835  VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894
               +           L P   Y F V A   LG+G+ +          ++P QAPS    
Sbjct: 1382 ---FPASDRTFRATGLEPEKYYMFSVTAQTRLGWGKTAYALVFTTNNRERP-QAPSMPQI 1437

Query: 895  GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ------SETLKEYGNVGIAV 948
               +I    I++   P     AP  YY +  + +N   FQ        TL  Y    +  
Sbjct: 1438 SRSQIQSRQITFTWTPGRDGFAPLRYYTV-QQSENSGPFQIIPERVEPTLTSYTANNLKP 1496

Query: 949  VRIPSEFYYTEYEVKVQAINDVGP 972
                    +T Y+ ++QA ND+GP
Sbjct: 1497 --------FTFYQFRIQATNDIGP 1512


>gi|344236284|gb|EGV92387.1| Protein sidekick-2 [Cricetulus griseus]
          Length = 2103

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 181/733 (24%), Positives = 307/733 (41%), Gaps = 72/733 (9%)

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPP--TNYPGVN 327
           G Y C   N+ G+++    ++   ++G F  +   +  + + G+A     P  +++P   
Sbjct: 18  GFYRCIVRNRMGALLQRQTEVQVAYMGSF--EEGEKHQSVSHGEAAVIRAPRISSFPRPQ 75

Query: 328 YYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387
             W RD     +    R+ ++ +  L   +    DAG Y   VQ+     G N    P+ 
Sbjct: 76  VTWFRDG--RKIPPSSRIAITLENTLVILSTVAPDAGRY--YVQAVNDKNGDNKTSQPIT 131

Query: 388 VFPHSNFQQLKFPNNFPKTF-------PEAPKAGDKVRLECVAFGYPVPSYN--WTRRGS 438
           +      + +  P +                    +V +ECVA   P+   +  W + G+
Sbjct: 132 L----AVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGA 187

Query: 439 PLPRNAYFENFNRILTIPNVKVEDQGEYICRA---SNDRSALESSVTISIQAEPNFTIPL 495
            L       ++NR LTI N  + D G Y C A   S+  S +     +S+   P F +  
Sbjct: 188 LLSNG--ISDYNRRLTITNPTLSDAGYYECEAVLRSSSVSPVTRGAYLSVLEPPQF-VKE 244

Query: 496 TDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553
            ++H+  + +  +   C A GVP  + +W+++  L+  E L    Q      D  L I  
Sbjct: 245 PERHITAEMEKVVDIPCRAKGVPPPSITWYKDAALVEVEKLTRFKQR----NDGGLQISG 300

Query: 554 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613
           L P+ D  M QC A N      +S  L V ++ P+  + PL+S     +G +V + C   
Sbjct: 301 LLPD-DTGMLQCFAHNAAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETS 357

Query: 614 AAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 669
            AP+P   W+K   I+ SG     R  + E+G+LLISP    D+G Y+C ATN  G+DE+
Sbjct: 358 GAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEA 417

Query: 670 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729
              L+V    +   + P   ++       + C    +  + V Y+W  +G  +       
Sbjct: 418 SADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------ 470

Query: 730 LET-PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQ 785
           +ET P I +D  G L I+     D G Y C V S  G  S    + V   P  P      
Sbjct: 471 VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVAT 530

Query: 786 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
           +  + + +  + W        P+  Y I+  +  N+ W      ++   VD      EA+
Sbjct: 531 LSTMERRAINLTWAKPFDGNSPLMRY-ILEMSENNAPW-----TILLASVD-----PEAT 579

Query: 846 IENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 903
              V  LVP  +Y+F++ A N++G G+ S  + + + P + P   P  +   G     + 
Sbjct: 580 SVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIM 639

Query: 904 ISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 960
           I W+P P   QN     Y I +         +F++ T  +  N+ +  + I     +T Y
Sbjct: 640 IQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNY 694

Query: 961 EVKVQAINDVGPG 973
           E++V A N  G G
Sbjct: 695 EIEVAAYNSAGLG 707



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 21/188 (11%)

Query: 212 ITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL-SGGNLIINDPRQVEDRG 270
           + L+C   G P P+  W K     +R++A+    +   RFTL   G+L+I+ P  + D G
Sbjct: 350 VVLACETSGAPRPAITWQK----GERILAS--GSVQLPRFTLLESGSLLIS-PTHISDAG 402

Query: 271 SYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWG--KAMFC----DPPTNYP 324
           +Y C A+N  G +   S  L         + + P+  +   G   +M C    DP     
Sbjct: 403 TYTCLATNSRG-VDEASADLV--VWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVT-- 457

Query: 325 GVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384
            V Y W +D     VE + R+ +  +G+L+ S     D G Y+C V S   +  RN    
Sbjct: 458 -VRYVWEKDGATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNA-HL 515

Query: 385 PLKVFPHS 392
            ++  PH+
Sbjct: 516 RVRQLPHA 523



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            ++  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1763 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1819

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1820 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1853



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 41/265 (15%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 878  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 934

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE-----VDRYTGRKE 843
            +   S T+Q+  G      I+ + + A+             VIG+      + + +   +
Sbjct: 935  IGPRSVTLQFRPGYDGKTSISRWVVEAQVG-----------VIGEGEEWLLIYQLSNEPD 983

Query: 844  ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            A    V  L P++ Y F++   N +G   PS PS +  T    P  AP+ +         
Sbjct: 984  ARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETS 1043

Query: 902  LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 956
            L + W PLP  + N    ++ YKI   K + ++   +TL       +   R+  E+    
Sbjct: 1044 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIED 1095

Query: 957  ---YTEYEVKVQAINDVGPGPESEV 978
               +TEY V+VQA N +G GP S+ 
Sbjct: 1096 LEEWTEYRVQVQAFNAIGSGPWSQA 1120



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 832
            PP  P  VQ  +V   S  + W  G+    P+ +Y I  R   +  W     +VS +   
Sbjct: 1333 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1391

Query: 833  KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 892
              VDR            L P+++Y+F+V A N++G  E S  S    T    P +AP+ +
Sbjct: 1392 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1439

Query: 893  GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 952
                     + I W+P   +K N   + ++I +R+      +  TL+   N G     + 
Sbjct: 1440 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1499

Query: 953  SEFY-------------------YTEYEVKVQAINDVGPGPES 976
            S +                    +  YE+++   N VG GP S
Sbjct: 1500 SLYSMRNLTRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPLS 1542



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G P SP  +       P  AP  +         L ++WEP P + QN
Sbjct: 1526 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQN 1584

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  +++N TE + +TL    N     V++ +   YT Y V + A N  G 
Sbjct: 1585 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSIAAFNAAGD 1639

Query: 973  GPES 976
            GP S
Sbjct: 1640 GPRS 1643



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +T    +  V+     +
Sbjct: 1232 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1290

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            Y       +   L P S Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1291 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1342

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY I  R+     +   +     N     V     F
Sbjct: 1343 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1400

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1401 --TSYKFRVKATNDIG 1414



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 774  VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 827
            ++ PP + P  V +    +TS  ++W    +   NG P +  YKI  +R++ +    +  
Sbjct: 1023 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1080

Query: 828  EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 887
             HV+   V+R     E +IE+ L  W+ Y  +V A N +G G P S +    T    P  
Sbjct: 1081 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVMGRTRESVPSS 1132

Query: 888  APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 947
             P+ +         + + W  +P   +N   + YK+ +++K D++ Q       GN   +
Sbjct: 1133 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1191

Query: 948  VVRIPSEFYYTEYEVKVQAINDVGPGPESE 977
              ++     Y  YEV+V A   +G G  S 
Sbjct: 1192 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1220


>gi|395826906|ref|XP_003786654.1| PREDICTED: protein sidekick-2 [Otolemur garnettii]
          Length = 2202

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 158/578 (27%), Positives = 257/578 (44%), Gaps = 51/578 (8%)

Query: 415 DKVRLECVAFGYPVPSYN--WTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASN 472
            +V +ECVA   P+   +  W + G+PL  ++   ++NR LTIPN    D G Y C A  
Sbjct: 261 SEVTMECVANARPLIKLHIMWKKDGAPL--SSGISDYNRRLTIPNPTGSDAGYYECEAIL 318

Query: 473 DRSALESSVT---ISIQAEPNFTIPLTDKHMDNQAD--LTWTCEAFGVPDVTYSWFRNGE 527
             S++ S V    +S+   P F +   ++H+  + +  +   C A GVP    +W+++  
Sbjct: 319 RSSSVPSVVRGAYLSVWEPPQF-VKEPERHITAEMEKVVDIPCRAKGVPPPAITWYKDAA 377

Query: 528 LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 587
           ++  E LP   Q      D  L I  L P+ D  M+QC A+N      +S  L V ++ P
Sbjct: 378 VVEVEKLPRFRQR----GDGSLQISSLVPD-DTGMFQCFARNAAGEVQTSTYLAVTSIAP 432

Query: 588 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNL 643
           +  + PL+S     +G +V + C    AP+P   W+K   I+ SG     R    E+G+L
Sbjct: 433 NITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSL 490

Query: 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 703
           LISP    D+G Y+C ATN  G+DE+   L+V    +   + P   ++       + C  
Sbjct: 491 LISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITRPPQDQSVIKGTQASMVCGV 549

Query: 704 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKST 762
             +  + + Y+W  +G  +G M+ N    P I +D  G L ++     D G Y C V S 
Sbjct: 550 THDPRVTIRYVWEKDGAALG-MENN----PRIRLDKNGSLHVSQTWSGDIGTYTCRVISA 604

Query: 763 VGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 820
            G  S    + V   P  P      +    + +  + W        P+  Y +    N N
Sbjct: 605 GGNDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTWAKPFDGNSPLLRYVLEMSEN-N 663

Query: 821 STWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQY 878
           + W      V+   VD      EA+   V  LVP  +Y+F++ A N++G G+ S  + + 
Sbjct: 664 APW-----TVLLASVD-----PEATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERV 713

Query: 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQS 935
           + P + P   P  +   G     + I W+P P   QN     Y I +         +F++
Sbjct: 714 SLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKN 773

Query: 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 973
            T  +  N+ +  + I     +T YE++V A N  G G
Sbjct: 774 ITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLG 806



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 21/189 (11%)

Query: 211 DITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT-LSGGNLIINDPRQVEDR 269
            + L+C   G P P+  W K     +R++A+    +   RFT L  G+L+I+ P  + D 
Sbjct: 448 SVVLACETSGAPRPAITWQK----GERILAS--GSVQLPRFTPLESGSLLIS-PTHISDA 500

Query: 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWG--KAMFC----DPPTNY 323
           G+Y C A+N  G +   S  L         + R P+  +   G   +M C    DP    
Sbjct: 501 GTYTCLATNSRG-VDEASADLVV--WARTRITRPPQDQSVIKGTQASMVCGVTHDPRVT- 556

Query: 324 PGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPF 383
             + Y W +D     +E + R+ +  +G+L+ S     D G Y+C V S   +  R+   
Sbjct: 557 --IRYVWEKDGAALGMENNPRIRLDKNGSLHVSQTWSGDIGTYTCRVISAGGNDSRSA-H 613

Query: 384 FPLKVFPHS 392
             ++  PH+
Sbjct: 614 LRVRQLPHA 622



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 101/280 (36%), Gaps = 27/280 (9%)

Query: 330 WARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389
           W +D     VE+  R     DG+L  S+L   D G + C  ++   +   +       + 
Sbjct: 372 WYKDAAVVEVEKLPRFRQRGDGSLQISSLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIA 431

Query: 390 PHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR------RGS-PLPR 442
           P+     L                G  V L C   G P P+  W +       GS  LPR
Sbjct: 432 PNITRGPLD----------STVIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPR 481

Query: 443 NAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDN 502
               E+ +  L I    + D G Y C A+N R   E+S  + + A    T P  D+ +  
Sbjct: 482 FTPLESGS--LLISPTHISDAGTYTCLATNSRGVDEASADLVVWARTRITRPPQDQSVIK 539

Query: 503 QADLTWTCEAFGVPDVT--YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560
               +  C     P VT  Y W ++G  L      +E+  R  +  N           D 
Sbjct: 540 GTQASMVCGVTHDPRVTIRYVWEKDGAALG-----MENNPRIRLDKNGSLHVSQTWSGDI 594

Query: 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 600
             Y CR  +       SA LRV  L P   + P+ + + A
Sbjct: 595 GTYTCRVISAGGNDSRSAHLRVRQL-PHAPEHPVATLSTA 633



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 128/348 (36%), Gaps = 25/348 (7%)

Query: 441 PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA-LESSVTISIQAEPNFTIPLTDKH 499
           PR+         L I +    D G Y  +A ND++   ++S  I++  E N   P     
Sbjct: 186 PRSQLAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVE-NVGGPADPIA 244

Query: 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELL-------NSETLPLEDQDRYFIQDNVLTIR 552
                    T    G  +VT     N   L         +  PL       I D    + 
Sbjct: 245 PTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIMWKKDGAPLSSG----ISDYNRRLT 300

Query: 553 YLNPE-RDPAMYQCRAKNQLKTRYSSAQLRVLTL--KPSFKKRPLESETYAGEGGNVTIF 609
             NP   D   Y+C A  +  +  S  +   L++   P F K P E    A     V I 
Sbjct: 301 IPNPTGSDAGYYECEAILRSSSVPSVVRGAYLSVWEPPQFVKEP-ERHITAEMEKVVDIP 359

Query: 610 CNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667
           C  +  P P   W KD  ++      R +   +G+L IS +  DD+G++ C A N  G  
Sbjct: 360 CRAKGVPPPAITWYKDAAVVEVEKLPRFRQRGDGSLQISSLVPDDTGMFQCFARNAAGEV 419

Query: 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 727
           ++   L V        + P   T+    ++ L C   T      A  W   G RI  +  
Sbjct: 420 QTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LAS 474

Query: 728 NELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774
             ++ P    ++ G L I+    +DAG Y C+  ++ G       ++V
Sbjct: 475 GSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 522



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 41/265 (15%)

Query: 733  PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 788
            PN+ ++     +T  +       E    ++ G+     + I  G PP LPG    + +  
Sbjct: 977  PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1033

Query: 789  VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE-----VDRYTGRKE 843
            +   S T+Q+  G      I+ + + A+             VIG+      + + +G  +
Sbjct: 1034 IGPRSVTLQFRPGYDGKTSISRWLVEAQVG-----------VIGEGEEWLLIHQLSGEPD 1082

Query: 844  ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901
            A    V  L P++ Y F++   N +G   PS PS +  T    P  AP+ +         
Sbjct: 1083 ARSMEVPNLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETS 1142

Query: 902  LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 956
            L + W PLP  + N    ++ YKI   K + ++   +TL       +   R+  E+    
Sbjct: 1143 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----MVQDRLEREYTIED 1194

Query: 957  ---YTEYEVKVQAINDVGPGPESEV 978
               +TEY V+VQA N +G GP S++
Sbjct: 1195 LEEWTEYRVQVQAFNAIGSGPWSQM 1219



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 786  VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 845
            V+  + ++  I W+ G     PIT Y I AR +    W ++    I KEV  YT   +  
Sbjct: 1862 VIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1918

Query: 846  IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 884
               +L P  +Y+F+VIA N+ G+G PSSPS   + PA K
Sbjct: 1919 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1952



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 856  YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915
            YE ++   N +G G PS P   +   A  P  AP  +   G     L ++WEP P + QN
Sbjct: 1625 YEIRMSVYNTVGEGPPSPPQEVFVGEA-VPTAAPRNVAVHGATATQLDVTWEPPPLDSQN 1683

Query: 916  APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 972
                 YKI FW  ++ N TE + +TL    N     V++ +   YT Y V V A N  G 
Sbjct: 1684 GDIQGYKIYFWEAQRPNFTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1738

Query: 973  GPES 976
            GP S
Sbjct: 1739 GPRS 1742



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 24/260 (9%)

Query: 723  GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 782
            G  D   +E PN+N        T  SF    +   V  S   + S K   +   P   P 
Sbjct: 1079 GEPDARSMEVPNLN------PFTYYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPA 1131

Query: 783  GVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDR 837
             V +    +TS  ++W    +   NG P +  YKI  +R++ +    +   H++   ++R
Sbjct: 1132 NVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS---HMVQDRLER 1188

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 897
                 E +IE+ L  W+ Y  +V A N +G G P S      T    P   P+ +     
Sbjct: 1189 -----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQMVMSRTRESVPSSGPTNVSALAT 1241

Query: 898  KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 957
                + + W  +P   +N   + YK+ +++K D++ Q  +    GN   +  ++     Y
Sbjct: 1242 TSSSMLVRWSDVPEADRNGLVLGYKVMYKEK-DSDAQPRSWLVEGNSSRS-AQLTGLGKY 1299

Query: 958  TEYEVKVQAINDVGPGPESE 977
              Y+V+V A   VG G  S 
Sbjct: 1300 VLYQVQVLAFTRVGDGTPSH 1319



 Score = 43.5 bits (101), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 28/219 (12%)

Query: 777  PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 836
            PP  P  VQ  +V   S  + W  G+    P+ +Y +  R   +  W   S  V      
Sbjct: 1432 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPSGRWTLHSASV------ 1484

Query: 837  RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 896
              +    A I + L P+++Y+F+V A N++G  E S  S    T    P +AP+ +    
Sbjct: 1485 --SHNASAFIVDRLKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTILSVTP 1542

Query: 897  GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI----- 951
                 + I W+P   +K N   + ++I +R+      +  TL+   N       +     
Sbjct: 1543 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPAATWAELTPMYS 1602

Query: 952  ------PSEFYYT--------EYEVKVQAINDVGPGPES 976
                  PS   Y          YE+++   N VG GP S
Sbjct: 1603 VRNLSRPSLTQYELDNLNKHRRYEIRMSVYNTVGEGPPS 1641



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)

Query: 778  PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 837
            PG P G+   EV  TS  + W   A     I  Y+I  R N  +      E V+     +
Sbjct: 1331 PGPPVGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1389

Query: 838  YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 895
            YT          L P S Y F++ A    G+GE +          D+P Q PS+  +   
Sbjct: 1390 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1441

Query: 896  GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 955
              K   + +SWE  P     +P  YY +  R+     +   +     N    +V     F
Sbjct: 1442 DVKARSVLLSWE--PGSDGLSPVRYYTVQTRELPSGRWTLHSASVSHNASAFIVDRLKPF 1499

Query: 956  YYTEYEVKVQAINDVG 971
              T Y+ +V+A ND+G
Sbjct: 1500 --TSYKFRVKATNDIG 1513


>gi|390335185|ref|XP_003724086.1| PREDICTED: titin-like [Strongylocentrotus purpuratus]
          Length = 1532

 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 167/633 (26%), Positives = 271/633 (42%), Gaps = 72/633 (11%)

Query: 167 LLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSY 226
           +L D  +    M+     ++P  P FI +P   ++ +  +    D+ L C A G     Y
Sbjct: 403 ILGDRASVAQIMEELGQSELPEPPAFIVEPEPELYIVRAK----DLQLHCEASGSSVIGY 458

Query: 227 EWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE 286
            W K+           +D  SD R  L+ GNL I  P    D G Y C  SN + +I+S 
Sbjct: 459 TWLKD--------GEELDIQSDPRMILNHGNLTIQFPDS-GDIGIYRCLVSNIYTTIVSS 509

Query: 287 SVQLAFGFIGEFN----LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED 342
              +   F+G F+      R   +G       + C+PP + P     WA +     +   
Sbjct: 510 ESSVRRAFMGSFSPGPGTIREVTVG---ISVILACNPPLSVPNPLVMWALNTSAEPINYS 566

Query: 343 KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNN 402
           +RV     G L  +++E+ D G Y C V +++ +     P   L +   +   ++ +   
Sbjct: 567 RRVSQDPKGNLIIASVEEQDTGLYYCIVVNEIMERRIESPRINLIIRKPAQPPEMVY--- 623

Query: 403 FPKTFPEAPKA---GDKVRLECVAFGYPVPSYNWTRRGSPLPRN-AYFENFNRILTIPNV 458
               +PE  K    G+++ L+C+A G PVP   W +  + LP N +   +F + L I ++
Sbjct: 624 ----YPETTKVGLEGEQLSLKCLAVGSPVPQIWWEKEDAELPHNRSSHTSFGQELIISSL 679

Query: 459 KVEDQGEYICRASNDRSA-LESSVTISIQAEP-------NFTIPLTDKHMDNQADLTWTC 510
           K+ED G Y C A N      ESSVT++++A P       + T+P+        +  ++ C
Sbjct: 680 KLEDAGLYRCIADNGAGVRAESSVTLTVKASPYWESEPVSLTVPV-------GSPASFIC 732

Query: 511 EAFGVPDVTYSWFRNGELLN--SETLPLEDQDRYFIQDNVLTIRYLNPERD---PAMYQC 565
            A G P    +W  N +  +  SE L L+       +    T+R +N   D    +  QC
Sbjct: 733 VARGDPTPAITWLINNQPADEVSEALKLD----LVAEPGHGTLR-VNKTVDVDSSSAVQC 787

Query: 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV-WKK 624
            A N+  T  S+A L VL L P F++    SE    EG  V + C    AP P    W  
Sbjct: 788 VASNRYGTIISNAHLTVLALAPVFREN-APSEVLVLEGDTVHLQCQGVGAPSPTVSWWNG 846

Query: 625 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 684
            G+ + + GR ++  +G+L+I  +   D   Y C   N  G + SK +L +    +    
Sbjct: 847 LGDKVANEGRFRMRADGSLVICDIKMTDERDYKCKIENKFGYETSKTQLFIRRR-TQMTN 905

Query: 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIW-THNGVRIGNMDLNELETPNINIDG-GLL 742
            P    I A   L L C+  ++    +++ W T  G+++           ++   G G L
Sbjct: 906 PPTDTRIPAGDQLFLPCAVTSDPAHHISFTWMTPRGLQV-----------SVGSGGDGSL 954

Query: 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVE 775
            I   S  D G Y C  KS +  +S    V+VE
Sbjct: 955 RIETVSDEDQGLYTCTAKSALDSVSASALVVVE 987



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 65/129 (50%), Gaps = 5/129 (3%)

Query: 850  LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 909
            L P+ TY F+V A N +G  EP   S QY TP D+P   P  I       G + + W+PL
Sbjct: 1275 LAPYMTYRFRVTAVNGVGRSEPKMTSGQYFTPPDRPISNPKNISFSVEN-GQVVVHWKPL 1333

Query: 910  PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 969
              E+  AP   YK+ WR      +Q   ++ +         IPS     +YEV VQA+N 
Sbjct: 1334 RPEEHGAPVFSYKVLWRPLETDTWQEAAIQMFQ----YTFTIPSSQEEGQYEVGVQAVNA 1389

Query: 970  VGPGPESEV 978
            VGPGPE E+
Sbjct: 1390 VGPGPEPEI 1398


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.136    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,435,514,329
Number of Sequences: 23463169
Number of extensions: 828801017
Number of successful extensions: 2166379
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4416
Number of HSP's successfully gapped in prelim test: 13692
Number of HSP's that attempted gapping in prelim test: 1814329
Number of HSP's gapped (non-prelim): 170865
length of query: 978
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 825
effective length of database: 8,769,330,510
effective search space: 7234697670750
effective search space used: 7234697670750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)