Query psy12060
Match_columns 978
No_of_seqs 629 out of 5822
Neff 10.9
Searched_HMMs 29240
Date Fri Aug 16 17:38:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12060.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12060hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 8.1E-65 2.8E-69 589.6 63.3 548 188-775 4-569 (570)
2 1e07_A Carcinoembryonic antige 100.0 8.9E-61 3E-65 566.9 59.9 558 140-775 71-639 (642)
3 3dmk_A DOWN syndrome cell adhe 100.0 5.7E-60 1.9E-64 576.5 63.0 635 188-873 37-707 (816)
4 3dmk_A DOWN syndrome cell adhe 100.0 5.5E-59 1.9E-63 567.8 55.5 592 141-778 200-811 (816)
5 3b43_A Titin; I-SET IG fold, e 100.0 6.8E-58 2.3E-62 531.4 51.5 498 135-676 56-569 (570)
6 1e07_A Carcinoembryonic antige 100.0 6.9E-55 2.4E-59 516.4 65.3 593 207-872 12-633 (642)
7 3v2a_R Vascular endothelial gr 100.0 1.3E-54 4.3E-59 527.6 14.5 593 140-783 86-763 (772)
8 3kld_A Contactin 4, axcam, BIG 100.0 9.8E-48 3.3E-52 423.1 35.0 371 188-583 4-382 (384)
9 2ec8_A MAST/stem cell growth f 100.0 1.2E-47 4.3E-52 442.3 37.1 438 189-680 36-513 (524)
10 3v2a_R Vascular endothelial gr 100.0 2.3E-49 7.7E-54 481.4 15.9 628 189-874 31-751 (772)
11 2ec8_A MAST/stem cell growth f 100.0 1.5E-47 5.3E-52 441.5 29.5 461 286-783 27-517 (524)
12 3qs9_E FL cytokine receptor; i 100.0 2.1E-46 7.3E-51 425.1 34.3 420 207-677 61-510 (527)
13 2ocw_A Polymeric-immunoglobuli 100.0 7.6E-45 2.6E-49 425.7 46.9 456 195-679 6-548 (585)
14 3qs9_E FL cytokine receptor; i 100.0 1.4E-46 4.8E-51 426.6 31.0 440 304-777 57-511 (527)
15 1cs6_A Axonin-1; neural cell a 100.0 7.7E-45 2.6E-49 401.3 38.8 371 188-583 3-381 (382)
16 1z7z_I Intercellular adhesion 100.0 2.5E-45 8.6E-50 414.7 30.8 420 192-677 2-449 (450)
17 2rcj_C Light chain; immunoglob 100.0 5.2E-44 1.8E-48 411.9 39.8 454 194-665 5-512 (523)
18 2rcj_C Light chain; immunoglob 100.0 1.3E-43 4.6E-48 408.5 39.2 450 302-764 7-512 (523)
19 2ocw_A Polymeric-immunoglobuli 100.0 1.6E-42 5.5E-47 406.0 48.6 452 303-778 8-548 (585)
20 2jll_A NCAM2, neural cell adhe 100.0 8.6E-43 2.9E-47 386.1 42.0 357 598-977 10-379 (389)
21 2v5m_A Dscam; neurobiology SPL 100.0 6.1E-43 2.1E-47 387.1 38.4 365 189-582 3-387 (388)
22 3p3y_A Neurofascin; IG domains 100.0 7.7E-43 2.6E-47 388.9 38.9 377 188-584 15-403 (404)
23 1bih_A Hemolin; insect immunit 100.0 5.4E-43 1.9E-47 388.7 33.4 373 187-582 4-394 (395)
24 1z7z_I Intercellular adhesion 100.0 3.8E-43 1.3E-47 396.7 32.3 410 302-777 6-450 (450)
25 3qs7_E FL cytokine receptor; i 100.0 2.7E-42 9.1E-47 381.2 31.7 351 408-784 57-422 (423)
26 3laf_A Deleted in colorectal c 100.0 9.1E-41 3.1E-45 371.9 38.6 371 188-584 20-401 (403)
27 3qs7_E FL cytokine receptor; i 100.0 2.8E-42 9.4E-47 381.1 25.0 393 265-681 3-418 (423)
28 3laf_A Deleted in colorectal c 100.0 3.5E-41 1.2E-45 375.3 34.0 363 299-679 25-403 (403)
29 3kld_A Contactin 4, axcam, BIG 100.0 1.5E-40 5.2E-45 365.8 31.4 346 308-676 21-382 (384)
30 1bih_A Hemolin; insect immunit 100.0 1.2E-39 4.2E-44 361.7 33.3 361 291-675 2-394 (395)
31 3p3y_A Neurofascin; IG domains 100.0 7.8E-39 2.7E-43 356.5 33.2 354 409-776 27-403 (404)
32 1cs6_A Axonin-1; neural cell a 100.0 6.7E-39 2.3E-43 353.7 31.7 357 295-676 4-381 (382)
33 2v5m_A Dscam; neurobiology SPL 100.0 4.7E-38 1.6E-42 347.9 32.8 343 411-774 16-387 (388)
34 2jll_A NCAM2, neural cell adhe 100.0 5.7E-37 1.9E-41 339.3 39.1 366 488-881 1-385 (389)
35 2v5y_A Receptor-type tyrosine- 100.0 3.5E-37 1.2E-41 368.4 38.2 437 502-977 90-556 (731)
36 2v5y_A Receptor-type tyrosine- 100.0 2.7E-36 9.3E-41 360.8 34.8 537 413-977 90-695 (731)
37 1wio_A CD4, T-cell surface gly 100.0 1.6E-36 5.6E-41 331.4 22.8 316 305-675 4-361 (363)
38 1wio_A CD4, T-cell surface gly 100.0 2.1E-36 7.2E-41 330.5 21.4 308 410-774 5-361 (363)
39 1qgc_4 Protein (immunoglobulin 100.0 3.6E-35 1.2E-39 330.4 20.9 368 192-579 4-434 (438)
40 1qgc_4 Protein (immunoglobulin 100.0 2.3E-34 7.8E-39 323.9 21.5 356 410-772 12-435 (438)
41 2rik_A Titin; I-SET IG fold, p 100.0 4.3E-32 1.5E-36 285.6 34.2 259 409-676 15-283 (284)
42 1qz1_A Neural cell adhesion mo 100.0 7.7E-33 2.6E-37 292.5 28.0 276 189-487 2-290 (291)
43 2yd9_A Receptor-type tyrosine- 100.0 9.7E-33 3.3E-37 293.4 28.6 279 188-492 5-296 (304)
44 2wim_A N-CAM 2, NCAM2, neural 100.0 9.5E-32 3.2E-36 284.2 29.1 276 189-489 4-286 (291)
45 1igt_B IGG2A intact antibody - 100.0 2.4E-32 8.3E-37 307.2 23.1 352 207-572 13-433 (444)
46 2rik_A Titin; I-SET IG fold, p 100.0 9.1E-31 3.1E-35 275.4 33.5 273 487-775 4-283 (284)
47 1igt_B IGG2A intact antibody - 100.0 1.7E-32 5.8E-37 308.4 20.8 348 410-764 11-433 (444)
48 2nzi_A Titin; IG-domain, FNIII 100.0 5.9E-31 2E-35 280.1 29.3 281 586-886 4-297 (305)
49 1qz1_A Neural cell adhesion mo 100.0 4.8E-31 1.6E-35 278.8 28.4 261 410-677 13-290 (291)
50 2yd9_A Receptor-type tyrosine- 100.0 2.4E-31 8.2E-36 282.7 24.9 261 409-681 16-295 (304)
51 2wim_A N-CAM 2, NCAM2, neural 100.0 1.2E-30 4E-35 275.8 27.3 263 410-680 15-287 (291)
52 1iga_A IGA1; immunoglobulin; N 100.0 6.6E-30 2.3E-34 289.5 32.8 374 409-791 11-468 (475)
53 1hzh_H IGG, immunoglobulin hea 100.0 2E-31 6.8E-36 300.8 19.2 349 410-765 11-443 (457)
54 1hzh_H IGG, immunoglobulin hea 100.0 4.1E-31 1.4E-35 298.2 21.2 358 207-573 13-443 (457)
55 1iga_A IGA1; immunoglobulin; N 100.0 9.4E-30 3.2E-34 288.2 31.2 359 208-573 15-443 (475)
56 1i1r_A GP130, interleukin-6 re 100.0 2.1E-30 7.3E-35 274.3 24.1 266 686-977 11-290 (303)
57 2y25_A Myomesin; structural pr 100.0 7.1E-31 2.4E-35 281.4 19.2 259 410-677 17-315 (317)
58 1igy_B IGG1 intact antibody MA 100.0 1.3E-32 4.5E-37 308.1 5.5 350 409-765 9-424 (434)
59 2o26_X MAST/stem cell growth f 100.0 2.1E-29 7E-34 265.8 28.3 264 188-489 11-290 (290)
60 4fqp_A Poliovirus receptor; im 100.0 4.5E-30 1.5E-34 274.0 22.2 277 193-489 4-306 (313)
61 1igy_B IGG1 intact antibody MA 100.0 4.7E-32 1.6E-36 303.6 5.3 354 207-573 12-424 (434)
62 1ry7_B FGFR-3, fibroblast grow 100.0 7.4E-31 2.5E-35 283.3 14.0 268 409-680 18-330 (334)
63 4fqp_A Poliovirus receptor; im 100.0 1.9E-29 6.3E-34 269.2 22.8 266 410-681 11-308 (313)
64 4dep_C Interleukin-1 receptor 100.0 4.8E-30 1.6E-34 278.8 17.8 260 410-677 18-333 (349)
65 3oq3_B IFN-alpha/beta binding 100.0 2.6E-29 9E-34 269.7 23.1 255 410-675 40-328 (329)
66 2o26_X MAST/stem cell growth f 100.0 4.4E-29 1.5E-33 263.3 22.5 250 409-679 22-290 (290)
67 2d9q_B Granulocyte colony-stim 100.0 1.3E-28 4.5E-33 261.7 24.9 267 687-977 8-296 (313)
68 3l5h_A Interleukin-6 receptor 100.0 2.2E-30 7.6E-35 302.9 12.2 517 409-978 13-582 (589)
69 4fom_A Poliovirus receptor-rel 100.0 6.7E-30 2.3E-34 272.2 14.9 273 208-490 13-303 (308)
70 1itb_B Type 1 interleukin-1 re 100.0 1.1E-29 3.9E-34 271.5 15.9 259 410-676 16-313 (315)
71 2y23_A Myomesin; structural pr 100.0 2.5E-29 8.4E-34 268.7 17.8 252 410-675 12-310 (312)
72 2y25_A Myomesin; structural pr 100.0 4.9E-29 1.7E-33 267.1 18.5 271 488-777 7-316 (317)
73 1ry7_B FGFR-3, fibroblast grow 100.0 3.1E-29 1.1E-33 270.6 16.8 276 495-781 15-332 (334)
74 3ejj_X Macrophage colony-stimu 100.0 3.5E-28 1.2E-32 256.4 24.5 270 189-490 4-284 (289)
75 3o4o_C Interleukin-1 receptor 100.0 2.9E-29 1E-33 271.3 16.3 280 188-486 17-334 (339)
76 3oq3_B IFN-alpha/beta binding 100.0 2.5E-28 8.4E-33 262.2 23.0 268 497-775 38-329 (329)
77 1itb_B Type 1 interleukin-1 re 100.0 7.6E-29 2.6E-33 265.1 18.8 273 497-776 14-314 (315)
78 4dep_C Interleukin-1 receptor 100.0 1.2E-28 4E-33 267.8 19.4 277 303-590 15-339 (349)
79 3rjd_A High affinity immunoglo 100.0 4.5E-28 1.5E-32 251.5 22.7 242 190-477 2-249 (262)
80 2oz4_A Intercellular adhesion 100.0 3.9E-28 1.3E-32 251.8 21.3 240 409-677 13-264 (265)
81 4fom_A Poliovirus receptor-rel 100.0 6.9E-29 2.4E-33 264.3 15.6 264 410-680 10-303 (308)
82 1zvo_C Myeloma immunoglobulin 100.0 1.8E-26 6.2E-31 262.4 34.9 354 303-668 8-494 (512)
83 1zvo_C Myeloma immunoglobulin 100.0 1.8E-26 6.3E-31 262.3 34.1 346 409-765 10-492 (512)
84 3o4o_C Interleukin-1 receptor 100.0 6.6E-29 2.2E-33 268.6 12.2 258 409-675 28-333 (339)
85 3vh8_G Killer cell immunoglobu 100.0 6.3E-28 2.2E-32 257.6 19.1 272 188-489 23-315 (316)
86 3ejj_X Macrophage colony-stimu 100.0 1.8E-27 6.2E-32 250.9 22.2 273 488-779 4-284 (289)
87 3rjd_A High affinity immunoglo 100.0 9.8E-27 3.4E-31 241.4 27.0 251 488-775 1-261 (262)
88 2oz4_A Intercellular adhesion 100.0 2.3E-27 7.7E-32 246.1 20.9 241 207-487 16-264 (265)
89 1n26_A IL-6 receptor alpha cha 100.0 8.2E-27 2.8E-31 248.7 25.7 264 688-977 15-286 (325)
90 3u83_A Poliovirus receptor-rel 100.0 4E-27 1.4E-31 253.7 22.9 265 302-584 21-320 (331)
91 2wng_A Tyrosine-protein phosph 100.0 4.7E-27 1.6E-31 252.3 23.1 266 302-577 10-312 (327)
92 3u83_A Poliovirus receptor-rel 99.9 3E-27 1E-31 254.7 21.1 263 409-680 24-323 (331)
93 1cfb_A Drosophila neuroglian; 99.9 6.8E-27 2.3E-31 231.6 21.9 190 774-976 2-193 (205)
94 3l5h_A Interleukin-6 receptor 99.9 4.6E-28 1.6E-32 283.3 15.8 352 598-977 13-390 (589)
95 2y23_A Myomesin; structural pr 99.9 6.4E-27 2.2E-31 249.9 22.6 261 497-775 10-311 (312)
96 2wng_A Tyrosine-protein phosph 99.9 4.1E-27 1.4E-31 252.8 20.4 260 409-673 13-315 (327)
97 4dkd_C Macrophage colony-stimu 99.9 3.8E-27 1.3E-31 248.9 18.3 271 189-489 4-283 (292)
98 3mjg_X Beta-type platelet-deri 99.9 2.4E-26 8.2E-31 242.2 23.0 255 207-492 13-283 (289)
99 4dkd_C Macrophage colony-stimu 99.9 5.1E-27 1.7E-31 248.0 17.1 274 487-781 3-286 (292)
100 3mjg_X Beta-type platelet-deri 99.9 1.7E-26 5.8E-31 243.4 20.6 253 409-681 10-282 (289)
101 3vh8_G Killer cell immunoglobu 99.9 1.2E-26 4.3E-31 247.5 15.9 256 410-679 34-315 (316)
102 2nzi_A Titin; IG-domain, FNIII 99.9 1.1E-24 3.8E-29 231.5 24.4 266 488-769 4-283 (305)
103 2vkw_A Neural cell adhesion mo 99.9 3.3E-25 1.1E-29 220.2 16.5 194 771-978 2-196 (209)
104 3p4l_A Neogenin; iron homeosta 99.9 5.9E-25 2E-29 218.7 17.2 186 776-978 3-197 (211)
105 2ibg_A CG9211-PA, GH03927P; IH 99.9 4.6E-24 1.6E-28 213.0 21.4 196 778-978 2-205 (214)
106 2q7n_A Leukemia inhibitory fac 99.9 5.3E-24 1.8E-28 234.0 22.9 263 685-977 209-478 (488)
107 3lpw_A A77-A78 domain from tit 99.9 1.5E-23 5.2E-28 206.5 19.8 186 775-978 3-189 (197)
108 3t1w_A Four-domain fibronectin 99.9 1.1E-21 3.8E-26 214.9 34.5 297 641-976 59-360 (375)
109 1za6_B IGG heavy chain; immuno 99.9 3E-24 1E-28 231.8 13.6 252 410-666 11-330 (344)
110 2wqr_A IG epsilon chain C regi 99.9 1.2E-24 4.2E-29 232.7 9.2 248 415-666 25-309 (323)
111 3vpp_A C-type lectin domain fa 99.9 1.2E-23 4E-28 190.6 13.9 126 26-160 1-126 (132)
112 3l5i_A Interleukin-6 receptor 99.9 4.9E-23 1.7E-27 216.7 20.4 211 743-977 64-282 (290)
113 3f7q_A Integrin beta-4, GP150; 99.9 2.2E-23 7.5E-28 210.8 16.0 185 776-977 4-190 (234)
114 2wqr_A IG epsilon chain C regi 99.9 7.9E-24 2.7E-28 226.4 12.5 257 504-765 25-309 (323)
115 3fl7_A Ephrin receptor; ATP-bi 99.9 1.1E-23 3.8E-28 232.6 13.0 216 749-978 304-526 (536)
116 1fnf_A Fibronectin; RGD, extra 99.9 7.9E-21 2.7E-25 207.6 34.7 296 642-977 59-359 (368)
117 1i1r_A GP130, interleukin-6 re 99.9 2.2E-21 7.4E-26 205.0 26.5 260 598-876 14-293 (303)
118 1za6_B IGG heavy chain; immuno 99.9 1.5E-22 5.2E-27 218.4 17.8 261 495-765 7-330 (344)
119 3lcy_A Titin; A-BAND, IG tande 99.9 9.8E-22 3.3E-26 193.6 22.0 185 485-677 4-196 (197)
120 1tdq_A Tenascin-R; extracellul 99.9 1.9E-21 6.4E-26 203.7 25.0 253 692-977 26-278 (283)
121 2py2_A Antifreeze protein type 99.9 1.6E-22 5.5E-27 183.3 13.6 126 27-160 2-128 (136)
122 2wv3_A Neuroplastin; igcam, me 99.9 1.5E-21 5.3E-26 190.6 21.6 166 411-583 14-189 (190)
123 3r8q_A Fibronectin; heparin, F 99.9 2.1E-21 7.1E-26 204.0 24.1 253 691-976 31-284 (290)
124 1bqu_A Protein (GP130); cytoki 99.9 2.8E-22 9.7E-27 200.1 16.2 188 774-977 4-194 (215)
125 2a38_A Titin; Z1Z2, structural 99.9 1.8E-21 6.2E-26 191.0 21.6 166 409-582 15-193 (194)
126 2a38_A Titin; Z1Z2, structural 99.9 1.1E-21 3.9E-26 192.5 20.0 183 487-675 4-193 (194)
127 4fa8_A Secreted protein BARF1; 99.9 1.8E-22 6.3E-27 197.1 14.0 164 409-576 3-194 (203)
128 2iep_A Muscle-specific kinase 99.9 4.4E-22 1.5E-26 195.1 15.5 186 186-391 4-191 (192)
129 3bx4_B Aggretin beta chain; to 99.9 1.8E-22 6E-27 186.2 11.6 119 28-159 24-144 (146)
130 2yd1_A Tyrosine-protein phosph 99.9 5.1E-21 1.7E-25 190.6 22.4 185 487-679 5-202 (212)
131 2yd1_A Tyrosine-protein phosph 99.9 2.8E-21 9.6E-26 192.5 20.5 169 409-584 16-200 (212)
132 1gz2_A Ovocleidin-17, OC-17 ov 99.9 3.7E-22 1.3E-26 183.7 12.8 129 26-159 2-140 (142)
133 1ypq_A Oxidised low density li 99.9 3.9E-22 1.3E-26 181.1 12.8 127 24-160 4-132 (135)
134 2iep_A Muscle-specific kinase 99.9 1.5E-21 5.2E-26 191.2 17.9 185 485-679 4-192 (192)
135 2yd6_A PTPRD protein; hydrolas 99.9 5.5E-21 1.9E-25 190.3 22.0 185 486-679 4-206 (212)
136 1zlg_A Anosmin 1; insulin-like 99.9 2.2E-21 7.5E-26 227.8 21.8 210 749-977 132-364 (680)
137 2d9q_B Granulocyte colony-stim 99.9 5E-21 1.7E-25 203.1 22.7 272 598-886 10-311 (313)
138 1qdd_A Lithostathine; pancreat 99.9 1.1E-21 3.6E-26 180.9 14.9 132 23-159 8-142 (144)
139 2j8h_A Titin, connectin; cardi 99.9 5.5E-21 1.9E-25 188.1 20.9 182 487-676 3-196 (197)
140 2yd6_A PTPRD protein; hydrolas 99.9 3.2E-21 1.1E-25 192.0 19.3 170 409-583 16-203 (212)
141 2ox9_A Collectin placenta 1; C 99.9 6.8E-22 2.3E-26 180.7 13.1 123 27-160 3-131 (140)
142 1dv8_A Asialoglycoprotein rece 99.9 9.7E-22 3.3E-26 176.8 13.7 119 29-159 1-126 (128)
143 1hq8_A NKG2-D; homodimer, CIS- 99.9 2.6E-22 9E-27 178.4 9.7 119 25-159 2-120 (123)
144 2kv3_A Regenerating islet-deri 99.9 5.3E-22 1.8E-26 179.6 11.9 126 28-159 2-129 (131)
145 1zlg_A Anosmin 1; insulin-like 99.9 1.4E-20 4.7E-25 221.0 27.0 305 650-974 132-489 (680)
146 1jwi_B Platelet aggregation in 99.9 8.9E-22 3E-26 175.9 12.8 120 27-159 2-123 (125)
147 1n26_A IL-6 receptor alpha cha 99.9 1.7E-20 5.8E-25 199.8 24.9 260 598-878 16-291 (325)
148 1tdq_B Aggrecan core protein; 99.9 1.2E-21 4.1E-26 176.8 13.6 123 26-159 4-129 (130)
149 2gee_A Hypothetical protein; f 99.9 2.8E-21 9.5E-26 190.2 17.2 177 775-977 21-198 (203)
150 3bdw_B NKG2-A/NKG2-B type II i 99.9 9.3E-22 3.2E-26 174.1 12.4 117 25-159 3-119 (120)
151 1tn3_A Tetranectin; plasminoge 99.9 1.1E-21 3.7E-26 179.2 13.0 128 26-160 3-135 (137)
152 3rs1_A C-type lectin domain fa 99.9 1.6E-21 5.3E-26 173.3 13.6 118 24-159 3-120 (122)
153 3g8k_A Lectin-related NK cell 99.9 1E-21 3.5E-26 177.0 12.6 119 28-160 6-124 (130)
154 1epf_A NCAM, protein (neural c 99.9 3.5E-21 1.2E-25 188.4 17.5 171 189-375 2-179 (191)
155 2vr9_A Roundabout 1, ROBO; imm 99.9 3.8E-21 1.3E-25 192.6 18.1 178 188-377 8-196 (217)
156 2b6b_D CD209 antigen; cryo EM 99.9 1.7E-21 5.7E-26 183.9 14.5 128 24-160 22-151 (175)
157 2c6u_A CLEC1B protein; lectin, 99.9 5.5E-22 1.9E-26 176.2 10.5 118 28-160 2-120 (122)
158 1wmz_A Lectin CEL-I, N-acetyl- 99.9 9.9E-22 3.4E-26 179.9 12.1 127 28-160 2-138 (140)
159 2j8h_A Titin, connectin; cardi 99.9 3.4E-21 1.2E-25 189.6 16.9 167 409-583 14-196 (197)
160 3bdw_A Natural killer cells an 99.9 4.5E-22 1.5E-26 177.1 9.2 119 26-159 2-120 (123)
161 2bpd_A Dectin-1; receptor, bet 99.9 2E-21 6.7E-26 177.7 13.7 124 26-159 14-140 (142)
162 2v9r_A Roundabout homolog 1; p 99.9 1E-20 3.5E-25 188.8 20.2 193 487-683 8-208 (212)
163 1sl6_A C-type lectin DC-signr; 99.9 2.2E-21 7.6E-26 185.2 14.3 127 25-160 49-177 (184)
164 3c22_A C-type lectin domain fa 99.9 2E-21 7E-26 181.0 13.7 127 26-160 20-150 (156)
165 1oz7_B Echicetin B-chain; plat 99.9 2.2E-21 7.6E-26 173.0 13.2 119 28-159 1-121 (123)
166 1uv0_A Pancreatitis-associated 99.9 2.2E-21 7.5E-26 179.9 13.7 131 24-159 9-147 (149)
167 2xr6_A CD209 antigen; sugar bi 99.9 2E-21 7E-26 183.3 13.5 129 23-160 16-146 (170)
168 3rbs_A Myomesin-1; immunoglobu 99.9 1.4E-21 4.8E-26 192.3 12.9 163 409-582 12-205 (207)
169 2v9r_A Roundabout homolog 1; p 99.9 8.5E-21 2.9E-25 189.3 18.8 192 189-393 9-205 (212)
170 2v44_A NCAM2, neural cell adhe 99.9 8.6E-21 3E-25 185.2 18.3 167 192-376 5-176 (189)
171 2vr9_A Roundabout 1, ROBO; imm 99.9 1E-20 3.6E-25 189.3 19.2 185 487-677 8-206 (217)
172 2vuv_A Codakine; sugar-binding 99.9 2.4E-21 8.2E-26 174.3 12.9 121 28-159 1-126 (129)
173 2wv3_A Neuroplastin; igcam, me 99.9 3.5E-20 1.2E-24 180.9 22.3 176 487-676 2-189 (190)
174 2e3x_C Coagulation factor X-ac 99.9 1.9E-21 6.4E-26 173.2 11.8 119 28-159 2-122 (122)
175 1fvu_B Botrocetin beta chain; 99.9 1.3E-21 4.5E-26 175.2 10.8 121 28-159 1-123 (125)
176 1jzn_A Galactose-specific lect 99.9 3.2E-21 1.1E-25 175.6 13.5 127 28-159 2-133 (135)
177 2h2t_B Low affinity immunoglob 99.9 2.2E-21 7.4E-26 184.0 12.8 124 25-160 13-139 (175)
178 3bx4_A Aggretin alpha chain; t 99.9 2.1E-21 7.3E-26 176.7 12.1 124 27-159 3-133 (136)
179 1mpu_A NKG2-D type II integral 99.9 1E-21 3.6E-26 178.5 10.0 118 26-159 18-135 (138)
180 2c5d_C AXL oncogene, tyrosine- 99.9 1.3E-20 4.5E-25 184.9 18.7 185 189-388 2-191 (195)
181 2v5t_A NCAM2, N-CAM 2, neural 99.9 4.1E-21 1.4E-25 187.7 14.9 181 299-487 6-188 (189)
182 3kqg_A Langerin, C-type lectin 99.9 3.3E-21 1.1E-25 184.8 13.8 127 26-160 46-176 (182)
183 2yhf_A C-type lectin domain fa 99.9 2.4E-21 8.3E-26 171.0 11.8 116 28-159 1-116 (118)
184 2ha1_A Fibronectin; beta sandw 99.9 6.7E-21 2.3E-25 187.6 16.2 177 780-976 2-194 (201)
185 3ubu_A Agglucetin subunit alph 99.9 3.2E-21 1.1E-25 174.5 12.7 124 27-159 2-129 (131)
186 1ukm_B EMS16 B chain, EMS16 su 99.9 4.6E-21 1.6E-25 172.3 13.5 121 29-160 1-123 (128)
187 3ff9_A Killer cell lectin-like 99.9 3.3E-21 1.1E-25 168.9 12.2 112 28-159 1-112 (115)
188 2v44_A NCAM2, neural cell adhe 99.9 1.7E-20 5.9E-25 183.1 18.6 167 410-583 13-186 (189)
189 1egg_A Macrophage mannose rece 99.9 3E-21 1E-25 178.7 12.4 128 27-160 3-139 (147)
190 1umr_C Convulxin beta, CVX bet 99.9 2.8E-21 9.6E-26 172.9 11.7 119 28-159 3-123 (125)
191 3s97_C Contactin-1; carbonic a 99.8 2.2E-20 7.6E-25 184.5 19.3 184 302-486 15-200 (201)
192 2va4_A NCAM2, N-CAM 2, neural 99.8 5.6E-20 1.9E-24 180.0 22.0 170 409-582 14-191 (192)
193 1sb2_A Rhodocetin alpha subuni 99.8 5.4E-21 1.8E-25 173.5 13.6 124 28-160 1-130 (133)
194 2v5t_A NCAM2, N-CAM 2, neural 99.8 2E-20 7E-25 182.6 18.7 182 488-676 2-187 (189)
195 3n06_B PRL-R, prolactin recept 99.8 1.4E-20 4.8E-25 186.5 17.6 189 776-978 2-197 (210)
196 1fvu_A Botrocetin alpha chain; 99.8 2.9E-21 1E-25 175.1 11.6 124 28-160 1-131 (133)
197 2c5d_C AXL oncogene, tyrosine- 99.8 2.5E-20 8.5E-25 182.9 19.1 175 488-675 2-191 (195)
198 3ubu_B Agglucetin subunit beta 99.8 5.4E-21 1.8E-25 171.6 13.1 120 28-159 3-124 (126)
199 4fa8_A Secreted protein BARF1; 99.8 1.9E-21 6.4E-26 189.9 10.9 168 207-377 6-192 (203)
200 1ukm_A EMS16 A chain, EMS16 su 99.8 4.5E-21 1.5E-25 174.3 12.5 124 27-159 2-131 (134)
201 1j34_B Coagulation factor IX-b 99.8 2.3E-21 7.9E-26 172.9 10.3 119 28-159 1-121 (123)
202 2afp_A Protein (SEA raven type 99.8 4.9E-22 1.7E-26 179.0 5.8 124 25-159 3-127 (129)
203 2zib_A Type II antifreeze prot 99.8 7.5E-21 2.6E-25 171.2 13.6 123 26-159 7-130 (133)
204 2va4_A NCAM2, N-CAM 2, neural 99.8 1E-19 3.5E-24 178.1 22.9 186 586-775 2-192 (192)
205 1fm5_A Early activation antige 99.8 4.9E-21 1.7E-25 184.8 13.1 117 24-159 80-196 (199)
206 1qr4_A Protein (tenascin); fib 99.8 2.7E-20 9.1E-25 180.8 18.5 174 774-976 3-176 (186)
207 1c3a_B Flavocetin-A: beta subu 99.8 3.2E-21 1.1E-25 172.5 10.9 119 28-159 3-123 (125)
208 3rbs_A Myomesin-1; immunoglobu 99.8 3.2E-20 1.1E-24 182.5 18.8 168 597-775 11-206 (207)
209 1epf_A NCAM, protein (neural c 99.8 2.2E-20 7.4E-25 182.7 17.6 167 410-582 13-189 (191)
210 1f97_A Junction adhesion molec 99.8 5.6E-20 1.9E-24 183.4 20.6 193 191-390 3-207 (212)
211 1oz7_A Echicetin A-chain; plat 99.8 6.2E-21 2.1E-25 172.4 12.3 123 28-160 1-128 (131)
212 3ff7_C Killer cell lectin-like 99.8 6.5E-21 2.2E-25 166.1 12.0 112 29-159 1-112 (112)
213 1hup_A Mannose-binding protein 99.8 5.2E-21 1.8E-25 174.4 11.8 119 28-159 19-139 (141)
214 1jwi_A Bitiscetin; domain swap 99.8 5.4E-21 1.8E-25 172.8 11.6 122 28-160 3-128 (131)
215 3m9z_A Killer cell lectin-like 99.8 4.6E-21 1.6E-25 175.1 11.2 122 27-160 4-125 (139)
216 3alu_A Lectin CEL-IV, C-type; 99.8 4.5E-21 1.6E-25 178.9 11.4 128 27-160 3-150 (157)
217 1c3a_A Flavocetin-A: alpha sub 99.8 5.6E-21 1.9E-25 173.8 11.6 123 28-159 3-131 (135)
218 3hup_A Early activation antige 99.8 1.6E-20 5.4E-25 168.8 14.4 116 25-159 12-127 (130)
219 1htn_A Tetranectin; plasminoge 99.8 5.3E-21 1.8E-25 182.6 11.7 128 26-160 48-180 (182)
220 3lcy_A Titin; A-BAND, IG tande 99.8 7.8E-20 2.7E-24 179.9 20.6 182 586-776 7-196 (197)
221 1j34_A Coagulation factor IX-b 99.8 5.5E-21 1.9E-25 172.5 11.1 123 28-159 1-129 (129)
222 1rhf_A Tyrosine-protein kinase 99.8 3.3E-20 1.1E-24 179.7 17.1 161 409-582 12-181 (182)
223 1sb2_B Rhodocetin beta subunit 99.8 1.3E-20 4.3E-25 169.5 12.8 121 27-160 2-126 (129)
224 3c8j_A Natural killer cell rec 99.8 3.5E-21 1.2E-25 186.0 9.7 122 25-160 76-197 (203)
225 1umr_A Convulxin alpha, CVX al 99.8 5.1E-21 1.7E-25 173.9 10.2 124 28-160 3-132 (135)
226 3mtr_A N-CAM-1, NCAM-1, neural 99.8 7.1E-20 2.4E-24 182.7 19.4 185 685-882 24-211 (215)
227 3t1w_A Four-domain fibronectin 99.8 4.2E-19 1.4E-23 194.4 26.9 252 694-976 16-270 (375)
228 1cd9_B G-CSF-R, protein (G-CSF 99.8 6.3E-20 2.2E-24 182.8 18.2 186 776-977 3-202 (215)
229 3sgj_C Human FCG3A receptor; r 99.8 2.3E-20 7.8E-25 183.5 14.3 172 188-394 6-178 (204)
230 1rtm_1 Mannose-binding protein 99.8 1.3E-20 4.5E-25 173.5 11.7 119 28-159 27-147 (149)
231 2ls8_A C-type lectin domain fa 99.7 2.4E-22 8.3E-27 187.0 0.0 127 28-160 2-129 (156)
232 3gpr_D Rhodocetin subunit delt 99.8 3E-21 1E-25 172.4 7.2 120 29-159 1-122 (124)
233 1nbq_A JAM, junctional adhesio 99.8 5.3E-20 1.8E-24 183.0 17.0 194 189-389 4-208 (209)
234 3gpr_C Rhodocetin subunit gamm 99.8 2.8E-21 9.4E-26 175.4 7.0 124 28-160 2-131 (134)
235 1uct_A Immunoglobulin alpha FC 99.8 5.3E-20 1.8E-24 182.8 16.6 184 188-391 8-199 (218)
236 1fnl_A Low affinity immunoglob 99.8 5.8E-20 2E-24 176.3 16.3 168 188-390 6-174 (175)
237 2r15_A Myomesin-1; sarcomeric 99.8 5.3E-20 1.8E-24 183.5 16.3 164 412-583 15-209 (212)
238 2e3x_B Coagulation factor X-ac 99.8 7.8E-21 2.7E-25 172.6 9.1 124 28-160 2-131 (134)
239 2d3v_A Leukocyte immunoglobuli 99.8 1.5E-20 5.1E-25 184.3 11.5 170 188-375 4-180 (196)
240 1fnf_A Fibronectin; RGD, extra 99.8 5.9E-19 2E-23 192.7 25.1 248 696-976 18-268 (368)
241 1rhf_A Tyrosine-protein kinase 99.8 1.9E-19 6.4E-24 174.4 18.4 173 488-675 2-181 (182)
242 3grw_A Fibroblast growth facto 99.8 2.6E-19 8.9E-24 182.5 20.4 186 596-783 23-225 (241)
243 3ojm_B Fibroblast growth facto 99.8 2.1E-19 7.2E-24 181.9 19.4 193 486-681 13-225 (231)
244 2x1w_L Vascular endothelial gr 99.8 1.2E-19 4.3E-24 180.3 17.4 183 596-779 15-210 (213)
245 1vca_A VCAM-D1,2, human vascul 99.8 1E-19 3.4E-24 178.6 16.2 173 412-587 14-199 (202)
246 3ojm_B Fibroblast growth facto 99.8 2.3E-19 8E-24 181.6 19.5 186 596-783 27-228 (231)
247 1uct_A Immunoglobulin alpha FC 99.8 6.1E-20 2.1E-24 182.4 14.7 174 305-488 18-199 (218)
248 1buu_A Protein (mannose-bindin 99.8 2E-20 6.8E-25 175.6 10.5 119 28-159 46-166 (168)
249 3g8l_A Lectin-related NK cell 99.8 3.2E-20 1.1E-24 177.7 12.1 122 25-160 62-184 (190)
250 3k0w_A Mucosa-associated lymph 99.8 1.4E-19 4.9E-24 180.7 17.1 157 409-583 28-201 (218)
251 1f97_A Junction adhesion molec 99.8 5.7E-20 2E-24 183.3 14.2 173 410-583 12-206 (212)
252 3s97_C Contactin-1; carbonic a 99.8 9.4E-20 3.2E-24 180.0 15.6 167 409-583 18-200 (201)
253 1f2q_A High affinity immunoglo 99.8 2.8E-20 9.5E-25 178.9 11.4 170 188-392 3-173 (176)
254 3sgj_C Human FCG3A receptor; r 99.8 1.6E-19 5.3E-24 177.5 17.0 161 598-781 17-179 (204)
255 2gi7_A GPVI protein; IG-like d 99.8 7.9E-20 2.7E-24 176.9 14.7 158 188-375 7-168 (184)
256 3p2t_A Leukocyte immunoglobuli 99.8 9.2E-20 3.2E-24 178.7 15.1 183 189-388 5-194 (196)
257 1ugn_A LIR1, leukocyte immunog 99.8 6E-20 2.1E-24 180.4 13.2 184 188-389 4-197 (198)
258 3grw_A Fibroblast growth facto 99.8 2.1E-19 7.3E-24 183.2 17.7 170 409-584 25-218 (241)
259 2x1w_L Vascular endothelial gr 99.8 1.2E-19 4.2E-24 180.4 15.5 177 304-491 16-211 (213)
260 2dtg_E Insulin receptor; IR ec 99.8 8.8E-21 3E-25 228.8 8.0 234 739-978 548-881 (897)
261 2ifg_A High affinity nerve gro 99.8 2.4E-21 8.3E-26 209.0 2.3 201 462-679 136-347 (347)
262 1oll_A NK receptor; immune sys 99.8 1.8E-19 6.2E-24 175.0 15.0 180 189-389 4-187 (188)
263 2d3v_A Leukocyte immunoglobuli 99.8 5.6E-20 1.9E-24 180.2 11.1 161 305-475 14-180 (196)
264 2r15_A Myomesin-1; sarcomeric 99.8 6.9E-19 2.4E-23 175.3 18.9 171 600-777 14-211 (212)
265 1vca_A VCAM-D1,2, human vascul 99.8 6.7E-19 2.3E-23 172.7 18.4 178 599-779 12-200 (202)
266 2c1o_A IGK-C protein; FAB frag 99.8 5.3E-20 1.8E-24 189.2 10.8 204 458-667 11-245 (254)
267 3p2t_A Leukocyte immunoglobuli 99.8 1.1E-19 3.9E-24 178.1 12.2 160 306-475 15-179 (196)
268 3b5h_A Cervical EMMPRIN, HAB18 99.8 2.4E-19 8.1E-24 174.0 14.3 163 409-583 8-182 (184)
269 3jz7_A MCAR, CAR, coxsackievir 99.8 3.1E-19 1.1E-23 178.2 15.4 174 304-489 9-214 (214)
270 2msb_A Mannose-binding protein 99.8 2E-19 6.8E-24 157.7 12.3 111 36-159 1-113 (115)
271 1hng_A CD2; T lymphocyte adhes 99.8 5.6E-20 1.9E-24 175.9 9.3 159 306-485 7-174 (176)
272 2ifg_A High affinity nerve gro 99.8 3.4E-20 1.1E-24 200.0 8.3 170 409-583 168-344 (347)
273 3r4d_A CEA-related cell adhesi 99.8 5.4E-19 1.8E-23 175.5 16.4 177 304-491 8-204 (208)
274 1ugn_A LIR1, leukocyte immunog 99.8 2.1E-19 7.3E-24 176.5 12.7 172 305-486 14-197 (198)
275 2gi7_A GPVI protein; IG-like d 99.8 3.1E-19 1.1E-23 172.7 13.6 146 410-572 18-168 (184)
276 1f2q_A High affinity immunoglo 99.8 4.6E-19 1.6E-23 170.3 14.7 171 485-680 1-174 (176)
277 1tdq_A Tenascin-R; extracellul 99.8 1.1E-18 3.8E-23 182.6 18.8 182 770-976 7-189 (283)
278 3pbf_A Pulmonary surfactant-as 99.8 3.8E-19 1.3E-23 164.0 13.1 122 28-159 26-148 (148)
279 3r8q_A Fibronectin; heparin, F 99.8 1.1E-18 3.8E-23 183.1 18.6 176 775-976 18-194 (290)
280 1pwb_A SP-D, PSP-D, pulmonary 99.8 9.7E-20 3.3E-24 172.9 9.4 122 28-159 54-177 (177)
281 3k0w_A Mucosa-associated lymph 99.8 2.7E-18 9.4E-23 171.4 20.1 170 587-778 19-204 (218)
282 1nbq_A JAM, junctional adhesio 99.8 1.6E-19 5.3E-24 179.6 10.7 169 409-578 14-201 (209)
283 1h8u_A MBP, eosinophil granule 99.8 4.9E-19 1.7E-23 156.0 12.6 113 39-159 1-117 (117)
284 4go6_B HCF C-terminal chain 1; 99.8 9.9E-20 3.4E-24 182.3 8.6 160 803-977 17-193 (232)
285 3jz7_A MCAR, CAR, coxsackievir 99.8 2.1E-18 7.1E-23 172.2 18.1 173 596-778 8-214 (214)
286 1oll_A NK receptor; immune sys 99.8 1.6E-19 5.6E-24 175.3 9.5 171 306-486 14-187 (188)
287 1fnl_A Low affinity immunoglob 99.8 2.3E-18 8E-23 165.1 17.4 165 487-676 6-173 (175)
288 3ry4_A Low affinity immunoglob 99.8 4.9E-19 1.7E-23 169.2 12.5 165 189-388 4-169 (170)
289 1mq8_A ICAM-1, intercellular a 99.8 5.2E-19 1.8E-23 180.8 13.4 264 193-489 3-284 (291)
290 2c1o_A IGK-C protein; FAB frag 99.8 7E-19 2.4E-23 180.7 14.1 202 557-766 13-245 (254)
291 1rdl_1 SUB-MBP-C, mannose-bind 99.8 1E-18 3.4E-23 152.5 12.3 109 38-159 1-111 (113)
292 2fbo_J V1V2;, variable region- 99.8 1.4E-18 4.9E-23 178.1 15.7 179 207-387 15-249 (250)
293 2ny1_B T-cell surface glycopro 99.8 1.6E-18 5.3E-23 168.1 15.0 161 304-490 4-182 (184)
294 1b6u_A KIR2DL3, P58 killer cel 99.8 1.3E-18 4.4E-23 176.6 14.9 225 188-438 6-241 (257)
295 4f80_A Butyrophilin subfamily 99.8 3.3E-18 1.1E-22 172.0 17.6 176 207-389 17-212 (226)
296 3bp6_B Programmed cell death 1 99.8 1.4E-18 4.7E-23 171.5 14.5 168 410-584 13-193 (202)
297 1jbj_A CD3 epsilon and gamma e 99.8 3E-19 1E-23 172.8 9.4 142 412-574 12-179 (186)
298 1p6f_A NKP46, natural cytotoxi 99.8 3.1E-18 1.1E-22 172.5 16.3 189 188-397 6-198 (242)
299 3e0g_A Leukemia inhibitory fac 99.8 5.9E-18 2E-22 184.1 19.5 261 685-977 204-473 (483)
300 1b6u_A KIR2DL3, P58 killer cel 99.8 8.1E-19 2.8E-23 178.0 11.9 210 305-526 16-240 (257)
301 1hng_A CD2; T lymphocyte adhes 99.8 1.5E-18 5.2E-23 165.9 12.8 156 597-774 5-174 (176)
302 2fbo_J V1V2;, variable region- 99.8 2.1E-18 7.1E-23 177.0 14.5 180 493-674 7-249 (250)
303 3b5h_A Cervical EMMPRIN, HAB18 99.8 9.7E-18 3.3E-22 162.6 17.9 162 498-676 8-182 (184)
304 1byf_A TC14, protein (polyandr 99.8 1.7E-18 5.6E-23 154.4 11.3 115 37-160 1-122 (125)
305 1mq8_A ICAM-1, intercellular a 99.8 2.3E-18 7.9E-23 176.0 13.8 263 494-780 5-286 (291)
306 3s98_A Interferon alpha/beta r 99.8 2.4E-18 8.2E-23 180.3 14.1 182 777-978 3-192 (306)
307 2ny1_B T-cell surface glycopro 99.8 3.9E-18 1.3E-22 165.3 14.5 161 597-781 4-184 (184)
308 3mj6_A Junctional adhesion mol 99.8 3.9E-18 1.3E-22 176.9 15.4 192 301-506 11-257 (268)
309 3r4d_A CEA-related cell adhesi 99.8 1.2E-17 4E-22 165.8 18.1 174 599-781 10-205 (208)
310 1wk1_A Hypothetical protein YK 99.8 1.4E-18 4.8E-23 160.5 10.5 119 35-160 2-130 (150)
311 1jbj_A CD3 epsilon and gamma e 99.8 3.1E-18 1.1E-22 165.6 12.8 146 500-667 11-179 (186)
312 3se4_A Interferon alpha/beta r 99.8 5.2E-18 1.8E-22 187.1 16.3 220 738-978 161-402 (414)
313 3bp6_B Programmed cell death 1 99.8 9.5E-18 3.3E-22 165.4 16.3 171 597-778 11-195 (202)
314 1nkr_A P58-CL42 KIR; inhibitor 99.8 7.1E-18 2.4E-22 165.8 15.2 183 188-388 7-200 (201)
315 1sy6_A T-cell surface glycopro 99.8 1.8E-18 6.3E-23 169.7 10.9 155 207-388 16-202 (204)
316 3mj8_L Stimulatory hamster ant 99.8 5E-18 1.7E-22 169.1 14.2 166 409-576 10-205 (213)
317 4i0k_A CD276 antigen; immunogl 99.8 7.4E-18 2.5E-22 169.2 14.9 179 304-493 4-212 (222)
318 3l5i_A Interleukin-6 receptor 99.8 5.2E-18 1.8E-22 178.1 14.4 172 776-975 2-185 (290)
319 3ry4_A Low affinity immunoglob 99.7 2.2E-17 7.6E-22 157.6 17.4 155 598-775 14-170 (170)
320 3d9a_L Light chain of hyhel10 99.7 7.7E-18 2.6E-22 167.7 14.2 163 410-574 12-203 (213)
321 4f80_A Butyrophilin subfamily 99.7 1.3E-17 4.6E-22 167.6 16.0 166 409-583 14-212 (226)
322 1hnf_A CD2; T lymphocyte adhes 99.7 1.1E-17 3.9E-22 159.5 14.2 158 305-483 9-177 (182)
323 3mj6_A Junctional adhesion mol 99.7 1.4E-17 4.8E-22 172.7 15.9 200 489-695 6-255 (268)
324 2if7_A SLAM family member 6; N 99.7 1.6E-17 5.5E-22 161.7 15.3 161 304-481 7-186 (193)
325 2pet_A Lutheran blood group gl 99.7 8.8E-18 3E-22 169.9 13.5 158 409-570 10-211 (231)
326 1p6f_A NKP46, natural cytotoxi 99.7 3.3E-18 1.1E-22 172.3 10.1 173 306-488 17-192 (242)
327 1gsm_A Madcam-1, mucosal addre 99.7 8.1E-17 2.8E-21 154.5 18.8 162 410-576 18-197 (210)
328 1lk3_L 9D7 light chain; antige 99.7 2.1E-17 7.1E-22 164.1 15.3 165 409-574 10-202 (210)
329 3d85_D IL-12B, interleukin-12 99.7 3.1E-17 1.1E-21 170.6 17.3 252 691-977 18-299 (306)
330 3bpo_C Interleukin-13 receptor 99.7 6.6E-17 2.3E-21 171.2 19.9 216 741-969 54-289 (314)
331 3pv7_A B7-H6, IG-like domain-c 99.7 1.4E-17 4.7E-22 170.4 14.1 178 410-589 14-229 (248)
332 3sbw_C Programmed cell death 1 99.7 4.7E-17 1.6E-21 163.3 17.5 170 410-584 12-211 (222)
333 2q7n_A Leukemia inhibitory fac 99.7 1.2E-16 4.2E-21 175.5 21.9 260 598-883 213-487 (488)
334 2pet_A Lutheran blood group gl 99.7 1.7E-17 5.6E-22 167.9 13.6 163 303-473 8-211 (231)
335 1nkr_A P58-CL42 KIR; inhibitor 99.7 2.1E-17 7.3E-22 162.4 13.7 159 305-474 17-184 (201)
336 3nl4_L Antigen binding fragmen 99.7 2.5E-17 8.6E-22 164.0 14.1 158 410-568 12-198 (213)
337 2zg1_A Sialic acid-binding IG- 99.7 5.3E-17 1.8E-21 161.8 16.4 173 303-485 8-213 (214)
338 2ed9_A Netrin receptor DCC; tu 99.7 8.3E-18 2.9E-22 150.3 9.3 114 859-978 3-116 (124)
339 1sy6_A T-cell surface glycopro 99.7 5.9E-18 2E-22 166.1 9.0 145 411-573 15-192 (204)
340 3s98_A Interferon alpha/beta r 99.7 2.5E-17 8.6E-22 172.5 13.8 204 748-977 69-294 (306)
341 2dtg_E Insulin receptor; IR ec 99.7 1.1E-17 3.7E-22 201.9 12.4 146 779-929 470-636 (897)
342 2if7_A SLAM family member 6; N 99.7 2.1E-16 7.3E-21 153.7 19.3 160 596-770 6-186 (193)
343 1dr9_A B7-1 (CD80), T lymphocy 99.7 2.6E-17 9E-22 162.1 12.6 170 305-483 4-197 (201)
344 1dr9_A B7-1 (CD80), T lymphocy 99.7 5.1E-17 1.7E-21 160.0 13.6 158 410-578 5-195 (201)
345 3se4_A Interferon alpha/beta r 99.7 1.1E-16 3.8E-21 176.5 17.4 206 746-977 71-298 (414)
346 3sbw_C Programmed cell death 1 99.7 2.2E-16 7.4E-21 158.4 17.9 181 494-680 7-214 (222)
347 3mj8_L Stimulatory hamster ant 99.7 8.4E-17 2.9E-21 160.2 14.7 172 597-770 9-207 (213)
348 3s96_B 3B5H10 FAB light chain; 99.7 4.6E-17 1.6E-21 162.8 12.7 164 410-575 11-211 (218)
349 2zg1_A Sialic acid-binding IG- 99.7 2E-16 6.9E-21 157.6 17.0 170 195-375 6-201 (214)
350 4frw_A Poliovirus receptor-rel 99.7 5.8E-17 2E-21 162.1 13.2 179 495-675 6-209 (218)
351 1c1e_H Catalytic antibody 1E9 99.7 6.3E-17 2.2E-21 161.8 13.3 166 410-578 11-214 (219)
352 1q0x_L FAB 9B1, light chain; a 99.7 1E-16 3.4E-21 159.5 14.7 163 410-573 11-204 (212)
353 4i0k_A CD276 antigen; immunogl 99.7 4.2E-17 1.4E-21 163.6 11.9 167 409-584 5-206 (222)
354 3lb6_C IL-13, interleukin-13 r 99.7 2.5E-16 8.7E-21 170.0 18.5 205 752-975 9-225 (380)
355 3tv3_L PGT128 light chain, IG 99.7 3.7E-17 1.3E-21 162.4 11.0 164 409-576 10-203 (211)
356 3d9a_L Light chain of hyhel10 99.7 1.6E-16 5.6E-21 158.1 15.6 168 597-766 10-203 (213)
357 4fmk_A Poliovirus receptor-rel 99.7 6.7E-17 2.3E-21 162.6 12.8 180 207-390 14-219 (225)
358 3nl4_L Antigen binding fragmen 99.7 7.8E-17 2.7E-21 160.4 12.9 163 303-471 9-198 (213)
359 2dru_A Chimera of CD48 antigen 99.7 6.8E-17 2.3E-21 154.6 11.9 154 304-482 8-176 (180)
360 1lk3_L 9D7 light chain; antige 99.7 2.9E-16 9.8E-21 155.8 16.6 169 596-766 8-202 (210)
361 3r06_A Anti-mouse CD3epsilon a 99.7 1E-16 3.6E-21 159.5 13.4 163 410-573 12-202 (213)
362 2xzc_L FAB A.17 light chain; i 99.7 2.6E-16 8.9E-21 156.9 16.2 165 409-574 10-205 (216)
363 3cfw_A L-selectin; EGF, cell a 99.7 7.8E-17 2.7E-21 151.1 11.5 117 39-160 1-120 (164)
364 2dbj_A Proto-oncogene tyrosine 99.7 1.1E-16 3.7E-21 142.5 11.7 106 867-978 1-110 (124)
365 1wj3_A KIAA1496 protein; beta 99.7 1.1E-16 3.8E-21 139.8 11.3 103 867-978 1-103 (117)
366 2p1y_A Bispecific alpha/beta T 99.7 6.4E-16 2.2E-20 156.8 18.8 175 192-374 3-222 (238)
367 3esu_F Antibody 14B7* light ch 99.7 8.1E-16 2.8E-20 157.3 19.6 174 192-372 7-231 (250)
368 1nfd_E H57 FAB; complex (immun 99.7 2.6E-17 8.9E-22 163.7 8.2 162 410-573 10-201 (212)
369 4frw_A Poliovirus receptor-rel 99.7 2E-16 6.9E-21 158.2 14.8 175 596-774 7-209 (218)
370 3r06_A Anti-mouse CD3epsilon a 99.7 4.6E-17 1.6E-21 162.1 9.9 179 190-374 2-200 (213)
371 3eow_R Poliovirus receptor; im 99.7 2.6E-17 8.8E-22 164.9 8.1 170 409-580 9-208 (221)
372 3mtr_A N-CAM-1, NCAM-1, neural 99.7 5.4E-16 1.8E-20 154.4 17.5 177 597-779 27-212 (215)
373 4fmk_A Poliovirus receptor-rel 99.7 1.5E-16 5.1E-21 160.0 13.2 172 410-582 12-215 (225)
374 1g1s_A P-selectin; selectin, l 99.7 1.7E-16 6E-21 148.4 12.3 117 39-160 1-120 (162)
375 1g1t_A E-selectin; EGF, adhesi 99.7 1.5E-16 5.2E-21 148.1 11.6 116 39-159 1-119 (157)
376 1nqb_A Single-chain antibody f 99.7 5.1E-16 1.7E-20 158.8 16.4 181 208-392 14-235 (256)
377 3sob_L Antibody light chain; b 99.7 3.1E-16 1E-20 159.2 14.6 165 410-575 35-227 (237)
378 2vol_A Murine IGG FC; FC, zinc 99.7 1.2E-16 4.1E-21 157.7 11.1 162 411-573 15-197 (207)
379 3auv_A SC-DSFV derived from th 99.7 4.6E-16 1.6E-20 161.4 16.1 196 190-392 13-256 (276)
380 2rgs_A I, IG gamma-2B heavy ch 99.7 5.3E-17 1.8E-21 161.7 8.6 161 411-573 23-205 (218)
381 3lb6_C IL-13, interleukin-13 r 99.7 1.1E-15 3.7E-20 165.1 19.3 281 654-969 10-313 (380)
382 1f3r_B FV antibody fragment; I 99.7 8.1E-16 2.8E-20 157.7 17.5 180 207-391 13-246 (257)
383 1hnf_A CD2; T lymphocyte adhes 99.7 9.5E-16 3.2E-20 146.1 16.6 156 596-773 7-178 (182)
384 3shs_A HOC head outer capsid p 99.7 7.9E-15 2.7E-19 140.0 22.6 231 410-662 13-279 (304)
385 3s96_B 3B5H10 FAB light chain; 99.7 1.1E-16 3.6E-21 160.2 10.4 168 207-375 13-208 (218)
386 3d85_D IL-12B, interleukin-12 99.7 5.2E-15 1.8E-19 153.9 23.5 245 600-875 18-301 (306)
387 1ccz_A Protein (CD58); LFA-3, 99.7 2.4E-16 8.1E-21 149.4 12.1 144 410-579 6-166 (171)
388 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 1.5E-16 5.2E-21 159.3 11.3 166 410-578 11-217 (222)
389 2ghw_B Anti-SARS SCFV antibody 99.7 1E-15 3.4E-20 156.3 17.5 179 207-389 15-241 (247)
390 1nqb_A Single-chain antibody f 99.7 3.2E-16 1.1E-20 160.4 13.7 174 409-583 10-232 (256)
391 1ccz_A Protein (CD58); LFA-3, 99.7 2E-16 6.8E-21 149.9 11.2 152 305-483 5-167 (171)
392 3d9a_H Heavy chain of hyhel10 99.7 2.2E-16 7.4E-21 156.6 11.7 163 410-576 11-206 (210)
393 3uzq_A Anti-dengue MAB 4E11; d 99.7 8.8E-16 3E-20 157.2 16.3 192 193-393 5-247 (253)
394 3bqu_C 3H6 FAB light chain; be 99.7 6.2E-17 2.1E-21 163.7 7.0 163 409-572 33-223 (233)
395 2j6e_L IGM, FAB light chain; a 99.7 1.4E-16 4.6E-21 161.4 9.5 165 409-574 29-225 (234)
396 2znx_A SCFV; fluorotryptohpan, 99.7 7.8E-16 2.7E-20 156.2 15.1 175 192-373 4-222 (242)
397 1gsm_A Madcam-1, mucosal addre 99.7 2.6E-15 8.9E-20 144.1 17.7 162 596-764 15-193 (210)
398 2p1y_A Bispecific alpha/beta T 99.7 4.8E-16 1.6E-20 157.7 12.9 160 410-571 11-222 (238)
399 3qib_D 2B4 beta chain; IG doma 99.7 2.4E-16 8.3E-21 163.2 10.9 196 358-573 3-244 (270)
400 2dru_A Chimera of CD48 antigen 99.7 1.2E-15 4.2E-20 145.8 14.9 152 207-377 12-171 (180)
401 2ghw_B Anti-SARS SCFV antibody 99.7 6E-16 2E-20 158.0 13.5 162 410-572 13-229 (247)
402 1q0x_L FAB 9B1, light chain; a 99.6 1.5E-15 5.3E-20 150.8 16.0 171 596-769 8-208 (212)
403 1axi_B HGHBP, growth hormone r 99.6 3.8E-16 1.3E-20 156.1 11.3 187 775-978 27-228 (236)
404 3bkj_L WO2 IGG2A FAB fragment 99.6 6.5E-16 2.2E-20 158.1 13.3 164 410-574 45-241 (252)
405 3eow_R Poliovirus receptor; im 99.6 6E-16 2E-20 154.9 12.7 169 304-483 8-208 (221)
406 3shs_A HOC head outer capsid p 99.6 4.7E-14 1.6E-18 134.7 24.7 247 490-760 4-278 (304)
407 3juy_B 3B3 single chain varian 99.6 1.6E-15 5.6E-20 155.5 16.2 179 189-374 6-243 (256)
408 1pz5_B Heavy chain of FAB (SYA 99.6 3.3E-16 1.1E-20 156.6 10.8 165 410-577 11-214 (220)
409 3umt_A SCFV heavy chain and li 99.6 2.1E-15 7.3E-20 154.6 17.0 182 207-392 15-247 (256)
410 3tv3_L PGT128 light chain, IG 99.6 9.1E-16 3.1E-20 152.3 13.7 171 597-770 9-205 (211)
411 3n1f_C Cell adhesion molecule- 99.6 6.5E-16 2.2E-20 131.1 10.5 91 884-978 3-96 (102)
412 1nfd_E H57 FAB; complex (immun 99.6 1.2E-16 4.2E-21 158.8 7.1 174 196-375 6-200 (212)
413 1f3r_B FV antibody fragment; I 99.6 9.9E-16 3.4E-20 157.1 13.9 180 497-677 9-245 (257)
414 3pv7_A B7-H6, IG-like domain-c 99.6 1.6E-15 5.4E-20 154.9 15.3 175 597-775 12-225 (248)
415 3lqm_A Interleukin-10 receptor 99.6 1E-15 3.5E-20 148.9 13.2 174 780-978 4-188 (201)
416 1c1e_H Catalytic antibody 1E9 99.6 1.2E-15 4E-20 152.5 14.0 168 207-376 13-209 (219)
417 2rgs_A I, IG gamma-2B heavy ch 99.6 7.5E-17 2.6E-21 160.6 5.1 183 188-375 8-204 (218)
418 1moe_A Anti-CEA MAB T84.66; an 99.6 2E-15 6.7E-20 153.4 15.7 174 192-372 4-219 (240)
419 4dzb_B Vbeta2 (MAIT T cell rec 99.6 2.1E-15 7.2E-20 153.8 15.4 170 597-767 10-222 (246)
420 1mju_H Immunoglobulin MS6-12; 99.6 1.5E-15 5.1E-20 152.2 13.7 167 207-375 13-205 (227)
421 3qib_D 2B4 beta chain; IG doma 99.6 1.2E-15 4.2E-20 157.9 13.4 200 557-767 5-246 (270)
422 3gkz_A Anti-methamphetamine si 99.6 6.2E-15 2.1E-19 151.3 18.6 192 192-392 11-251 (257)
423 1uey_A KIAA0343 protein; immun 99.6 8.5E-16 2.9E-20 137.6 10.5 120 766-895 5-126 (127)
424 1wfo_A Sidekick 2; FN3, cell a 99.6 4E-16 1.4E-20 140.6 8.3 113 860-977 3-115 (130)
425 2xzc_L FAB A.17 light chain; i 99.6 4E-15 1.4E-19 148.3 16.4 170 596-767 8-206 (216)
426 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 4.4E-15 1.5E-19 152.1 16.9 192 191-391 5-249 (256)
427 1mju_H Immunoglobulin MS6-12; 99.6 2E-15 6.8E-20 151.3 13.7 182 597-781 9-222 (227)
428 3ux9_B SCFV antibody; five hel 99.6 4.7E-15 1.6E-19 152.2 16.5 172 303-474 10-236 (256)
429 2ee2_A Contactin-1; neural cel 99.6 2.5E-15 8.6E-20 132.7 12.5 105 867-978 1-105 (119)
430 3bqu_C 3H6 FAB light chain; be 99.6 1.5E-16 5.1E-21 160.9 5.2 180 190-375 24-223 (233)
431 3umt_A SCFV heavy chain and li 99.6 1.5E-15 5E-20 155.8 12.7 174 410-584 13-245 (256)
432 4dzb_B Vbeta2 (MAIT T cell rec 99.6 1.3E-15 4.3E-20 155.5 12.0 162 410-573 12-220 (246)
433 2edx_A Protein tyrosine phosph 99.6 2.7E-15 9.3E-20 136.1 13.0 109 867-978 1-110 (134)
434 3omz_A Human vdelta1 gamma del 99.6 5.1E-15 1.7E-19 152.1 16.6 178 190-373 3-231 (259)
435 2fbj_H IGA-kappa J539 FAB (hea 99.6 3.5E-15 1.2E-19 148.8 14.6 163 410-575 11-212 (220)
436 1svz_A Immunoglobulin;, single 99.6 5.6E-15 1.9E-19 150.7 16.3 176 192-373 4-228 (247)
437 1op3_H FAB 2G12, heavy chain; 99.6 1.5E-15 5.1E-20 152.1 11.8 162 410-574 11-215 (225)
438 1qok_A MFE-23 recombinant anti 99.6 7.2E-15 2.5E-19 152.8 17.3 190 193-392 30-270 (282)
439 3auv_A SC-DSFV derived from th 99.6 8.8E-15 3E-19 151.7 17.8 185 597-781 21-259 (276)
440 3f7q_A Integrin beta-4, GP150; 99.6 1.2E-14 4E-19 146.5 18.0 207 693-928 18-232 (234)
441 1dee_B IGM RF 2A2; FAB-IBP com 99.6 1.2E-14 4.1E-19 145.2 17.9 168 409-577 10-220 (223)
442 1qok_A MFE-23 recombinant anti 99.6 5.5E-15 1.9E-19 153.7 15.9 173 410-584 37-268 (282)
443 1i1c_A IGG2A, IG gamma-2A chai 99.6 1.1E-15 3.7E-20 153.8 10.2 162 411-573 29-211 (239)
444 3bkj_L WO2 IGG2A FAB fragment 99.6 4.6E-15 1.6E-19 151.7 15.0 167 597-765 43-240 (252)
445 3gkz_A Anti-methamphetamine si 99.6 3.5E-15 1.2E-19 153.1 13.8 162 410-572 19-236 (257)
446 3bae_H WO2 IGG2A FAB fragment 99.6 1.6E-15 5.4E-20 152.4 10.8 164 410-576 11-218 (228)
447 3ux9_B SCFV antibody; five hel 99.6 1.1E-14 3.6E-19 149.5 17.0 165 207-373 15-235 (256)
448 3sob_L Antibody light chain; b 99.6 5.8E-15 2E-19 149.7 14.9 172 597-769 33-229 (237)
449 2vol_A Murine IGG FC; FC, zinc 99.6 1.3E-15 4.5E-20 150.2 9.7 162 600-765 15-197 (207)
450 1pz5_B Heavy chain of FAB (SYA 99.6 2.6E-15 9E-20 150.0 11.8 172 303-482 8-216 (220)
451 2znx_A SCFV; fluorotryptohpan, 99.6 3.3E-15 1.1E-19 151.5 12.6 160 410-570 12-222 (242)
452 2gjj_A A21 single-chain antibo 99.6 7.7E-15 2.6E-19 150.7 15.2 178 190-373 6-239 (264)
453 3esu_F Antibody 14B7* light ch 99.6 1.6E-14 5.6E-19 147.6 17.0 169 491-662 7-231 (250)
454 1op3_H FAB 2G12, heavy chain; 99.6 4.9E-15 1.7E-19 148.4 12.7 166 207-375 13-213 (225)
455 2fbj_H IGA-kappa J539 FAB (hea 99.6 9.8E-15 3.3E-19 145.5 14.7 167 207-376 13-210 (220)
456 3d9a_H Heavy chain of hyhel10 99.6 4.7E-15 1.6E-19 146.9 12.2 167 599-769 11-207 (210)
457 1dee_B IGM RF 2A2; FAB-IBP com 99.6 2.1E-14 7.3E-19 143.4 16.6 172 303-481 8-221 (223)
458 1l6x_A Immunoglobulin gamma-1 99.6 2.5E-15 8.6E-20 148.2 9.6 161 412-573 16-197 (207)
459 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 4.8E-15 1.6E-19 148.3 11.5 171 599-772 11-219 (222)
460 3uzq_A Anti-dengue MAB 4E11; d 99.6 2.3E-14 7.9E-19 146.6 16.6 185 597-781 10-249 (253)
461 2j6e_L IGM, FAB light chain; a 99.6 4.4E-15 1.5E-19 150.2 10.9 174 596-770 27-229 (234)
462 1va9_A DOWN syndrome cell adhe 99.6 8.6E-15 3E-19 130.3 11.5 102 877-978 7-109 (122)
463 3fku_X Neutralizing antibody F 99.6 2.2E-14 7.6E-19 148.8 16.4 190 196-392 7-252 (280)
464 3juy_B 3B3 single chain varian 99.6 2.5E-14 8.5E-19 146.6 16.4 175 488-665 6-244 (256)
465 2dlh_A Receptor-type tyrosine- 99.6 4.4E-15 1.5E-19 132.0 9.3 107 867-978 1-107 (121)
466 1x4y_A Biregional cell adhesio 99.6 1.2E-14 4.1E-19 127.1 11.9 94 881-978 4-100 (114)
467 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 1.4E-14 4.8E-19 149.5 14.4 178 190-373 16-254 (268)
468 2w59_A IGY FCU3-4; immunoglobu 99.6 2.5E-15 8.6E-20 150.8 8.5 163 410-573 24-217 (231)
469 3nl4_H Antigen binding fragmen 99.6 5.5E-15 1.9E-19 147.0 10.9 164 409-579 9-209 (215)
470 3liz_H 4C3 monoclonal antibody 99.6 3.5E-15 1.2E-19 152.4 9.7 170 410-582 11-218 (253)
471 2gki_A Nuclease; anti-DNA anti 99.6 2.8E-14 9.6E-19 148.9 16.6 182 207-392 35-274 (291)
472 1x5h_A Neogenin; RGM binding, 99.6 2.9E-15 9.8E-20 135.4 7.4 108 867-978 1-108 (132)
473 1x5i_A Neogenin; RGM binding, 99.6 1.4E-14 4.7E-19 128.8 11.7 104 864-977 2-111 (126)
474 1dn0_B IGM-kappa cold agglutin 99.6 2.7E-14 9.3E-19 143.5 15.3 172 410-583 11-226 (232)
475 3m8o_H Immunoglobulin A1 heavy 99.6 1.9E-14 6.6E-19 143.8 14.1 161 410-574 11-213 (221)
476 2xqy_G A13-D6.3 monoclonal ant 99.6 1.2E-14 4.2E-19 148.3 12.9 161 410-573 17-214 (261)
477 3omz_A Human vdelta1 gamma del 99.6 5.4E-15 1.9E-19 151.9 10.2 161 409-570 12-231 (259)
478 3bae_H WO2 IGG2A FAB fragment 99.6 1.1E-14 3.7E-19 146.2 12.2 168 207-376 13-215 (228)
479 3nfj_J T cell receptor beta ch 99.6 1.9E-14 6.5E-19 146.5 13.8 163 410-573 12-219 (245)
480 1v5j_A KIAA1355 protein, RSGI 99.6 6.2E-15 2.1E-19 124.6 8.3 86 887-978 9-94 (108)
481 4ei6_B Vbeta16 XV19 type II na 99.6 4.3E-14 1.5E-18 143.9 16.1 169 597-767 11-221 (245)
482 2haz_A N-CAM 1, neural cell ad 99.6 8E-15 2.7E-19 125.7 8.9 94 881-978 3-97 (105)
483 3nl4_H Antigen binding fragmen 99.6 4.7E-14 1.6E-18 140.2 15.9 169 598-773 9-211 (215)
484 1c5d_H Monoclonal antibody aga 99.6 1.8E-14 6.2E-19 143.0 12.8 162 410-576 11-208 (215)
485 4acp_A IG gamma-1 chain C regi 99.6 4.9E-15 1.7E-19 148.2 8.6 194 464-664 1-216 (240)
486 2gki_A Nuclease; anti-DNA anti 99.6 2.2E-14 7.7E-19 149.7 13.8 161 410-571 33-258 (291)
487 3nfj_J T cell receptor beta ch 99.5 2.1E-14 7.3E-19 146.1 13.2 170 597-767 10-221 (245)
488 1uen_A KIAA0343 protein; immun 99.5 6.4E-15 2.2E-19 131.7 8.2 100 877-978 6-111 (125)
489 3pl6_D MBP peptide / T-cell re 99.5 5.2E-14 1.8E-18 145.4 16.2 169 596-766 34-242 (268)
490 1wf5_A Sidekick 2 protein; FNI 99.5 8.2E-15 2.8E-19 130.1 8.6 116 762-886 2-119 (121)
491 1hxm_B Gamma-delta T-cell rece 99.5 9.4E-14 3.2E-18 140.7 17.6 176 192-376 4-218 (242)
492 4acp_A IG gamma-1 chain C regi 99.5 6.8E-15 2.3E-19 147.2 9.0 161 411-572 36-217 (240)
493 2w59_A IGY FCU3-4; immunoglobu 99.5 2.5E-15 8.4E-20 150.9 5.8 175 190-375 13-216 (231)
494 1moe_A Anti-CEA MAB T84.66; an 99.5 4.7E-14 1.6E-18 143.1 15.3 166 597-762 10-220 (240)
495 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.5 6E-14 2E-18 143.7 16.1 179 596-777 11-249 (256)
496 2edy_A Receptor-type tyrosine- 99.5 1E-14 3.6E-19 125.1 8.8 94 879-978 2-95 (103)
497 1eer_B Epobp, erythropoietin r 99.5 1.7E-14 5.7E-19 143.9 11.5 187 779-978 22-216 (227)
498 1v5j_A KIAA1355 protein, RSGI 99.5 1.3E-14 4.4E-19 122.7 8.9 97 775-882 5-101 (108)
499 1wis_A KIAA1514 protein; FNIII 99.5 9.1E-15 3.1E-19 129.9 8.4 105 775-886 15-122 (124)
500 4ei6_B Vbeta16 XV19 type II na 99.5 2.3E-14 8E-19 145.9 12.5 160 410-572 13-218 (245)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=8.1e-65 Score=589.60 Aligned_cols=548 Identities=23% Similarity=0.370 Sum_probs=424.5
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEee--cceEEEeCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLS--GGNLIINDPRQ 265 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~ 265 (978)
.||.|+..+.+..+. +|+.++|+|.+.|.|.|.|+|||||.++... ...++... .++|.|.++ +
T Consensus 4 ~pP~f~~~~~~~~v~-----~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~--------~~~~~~~~~~~~~L~I~~v-~ 69 (570)
T 3b43_A 4 EPPYFIEPLEHVEAA-----IGEPITLQCKVDGTPEIRIAWYKEHTKLRSA--------PAYKMQFKNNVASLVINKV-D 69 (570)
T ss_dssp CCCEEEECCCCEEEC-----TTSCEEEEEEEESSSSCEEEEECSSSBCCCC--------SSEEEECCTTEEEEEESSC-C
T ss_pred CCCcceEECCceEEc-----CCCEEEEEEEEccCCCCEEEEEECCEEccCC--------CCEEEEEECCEEEEEEccC-C
Confidence 468888877776654 4667999999999999999999999765321 11112222 357999997 8
Q ss_pred CCCCeEEEEEEEeCceeEEeEEEEEEEe---eecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEeccccccccccc
Q psy12060 266 VEDRGSYHCKASNKFGSIISESVQLAFG---FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED 342 (978)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~~s~~~~l~v~---~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~ 342 (978)
.+|+|.|+|.|.|..|...+ ...+.|. .+|.+...........|..++|.|.+ .|.|++.|+|+|||.++.....
T Consensus 70 ~~D~G~Y~C~a~N~~g~~~~-~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~k~g~~l~~~~~ 147 (570)
T 3b43_A 70 HSDVGEYTCKAENSVGAVAS-SAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRI-NGSEPLQVSWYKDGELLKDDAN 147 (570)
T ss_dssp GGGCEEEEEEEEETTEEEEE-EEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEE-ESSSSCEEEEEETTEECCCCSS
T ss_pred hhhCEEEEEEEEeCCceEEE-EEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEE-ccCCCCEEEEEECCEECcCCCC
Confidence 99999999999999998654 3445443 23444444455666789999999998 5778899999999987543222
Q ss_pred ceEE-EeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEE
Q psy12060 343 KRVF-VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC 421 (978)
Q Consensus 343 ~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C 421 (978)
.... ....++|.|.++..+|+|.|+|.|.|..|.... ...|.|......+.+...+ ....+.+|++++|.|
T Consensus 148 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~---~~~l~v~~~~~pp~~~~~p-----~~~~v~~G~~~~l~C 219 (570)
T 3b43_A 148 LQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASS---SAKLTLSEHEVPPFFDLKP-----VSVDLALGESGTFKC 219 (570)
T ss_dssp EEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEE---EEEEEEECCCCCCEEEECC-----CCBCCBSBSCEEEEE
T ss_pred EEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEE---EEEEEEcCCCCCCccccCC-----ceeEecCCCeEEEEE
Confidence 1111 222357999999999999999999998764322 2455554322111111111 124567999999999
Q ss_pred EEeecCCCeeEEEEcCccCCCCcee----eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCC-
Q psy12060 422 VAFGYPVPSYNWTRRGSPLPRNAYF----ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLT- 496 (978)
Q Consensus 422 ~~~g~p~~~v~W~~~~~~l~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~- 496 (978)
.+.|.|.+.|+|+|++..+.....+ ......|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.+...+.
T Consensus 220 ~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~ 299 (570)
T 3b43_A 220 HVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEP 299 (570)
T ss_dssp EEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCS
T ss_pred EEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCC
Confidence 9999999999999999998765432 22346899999999999999999999999999999999999998776543
Q ss_pred cccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEe--cCEEEEEeCCCCCCCeEEEEEEEcCCCce
Q psy12060 497 DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ--DNVLTIRYLNPERDPAMYQCRAKNQLKTR 574 (978)
Q Consensus 497 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~ 574 (978)
...+.+|+.+.|.|.+.|.|.+.+.|+|+|..+... ...+.... ...|.|.++.. +|+|.|+|.|.|..|..
T Consensus 300 ~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~-----~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~~ 373 (570)
T 3b43_A 300 SRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES-----SKFRMSFVESVAVLEMYNLSV-EDSGDYTCEAHNAAGSA 373 (570)
T ss_dssp BCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCS-----SSEEEEEETTEEEEEEESCCG-GGCEEEEEEEEBTTBCC
T ss_pred ccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCC-----CcEEEEEECCEEEEEECCCCc-ccCEEEEEEEEeCCCEE
Confidence 345789999999999999999999999999998732 11122222 24799999997 99999999999999999
Q ss_pred eeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecC---cEEEccccCC
Q psy12060 575 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRD 651 (978)
Q Consensus 575 ~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~---~l~i~~~~~~ 651 (978)
...+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.|.|.|.++|+|+|..+..+.++.+..++ +|.|.++..+
T Consensus 374 ~~~~~l~V~~-~P~~~~~~~--~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~ 450 (570)
T 3b43_A 374 SSSTSLKVKE-PPVFRKKPH--PVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSA 450 (570)
T ss_dssp EEEEEECEEC-CCEECSCCC--CEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGG
T ss_pred EEEEEEEecC-CCeeecCCC--ceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChh
Confidence 8888888874 676665543 345789999999999999999999999999999888777765543 5999999999
Q ss_pred CCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccccccc
Q psy12060 652 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 731 (978)
Q Consensus 652 d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~ 731 (978)
|+|.|+|.|.|..|.....+.|.|..+|.+... +..+.+..|+.+.|.|.+.+.|++.+ .|++++..+.... .
T Consensus 451 D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~-~~~~~~~~g~~~~l~c~~~g~p~~~v--~W~k~~~~~~~~~----~ 523 (570)
T 3b43_A 451 DIGEYQCKASNDVGSDTCVGSITLKAPPRFVKK-LSDISTVVGEEVQLQATIEGAEPISV--AWFKDKGEIVRES----D 523 (570)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEECCCCEEEEC-CCCBCCBTTCCEEEEEEEESCSSCCC--EEEETTEECCCCT----T
T ss_pred hCEEEEEEEEECCCeEEEEEEEEeccCCccccc-CCCceecCCCeEEEEEEEecCCCCEE--EEEeCCeEeccCC----C
Confidence 999999999999999999999999887776543 45677889999999999999887765 8999986553211 0
Q ss_pred CCeee--cCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEc
Q psy12060 732 TPNIN--IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775 (978)
Q Consensus 732 ~~~~~--~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~ 775 (978)
...+. .....|.|.++..+|+|.|+|.|.|.+|..+.++.|.|.
T Consensus 524 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 524 NIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp TEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred eEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 11111 123589999999999999999999999999999998875
No 2
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=8.9e-61 Score=566.95 Aligned_cols=558 Identities=19% Similarity=0.323 Sum_probs=430.2
Q ss_pred cceeeeecCCCcceeeEEEecccccceeecccceeeeeecccCCCCCCCCCeeEeCCCceEecCCCccccCcEEEEEEee
Q psy12060 140 KRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAG 219 (978)
Q Consensus 140 ~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~ 219 (978)
..|.|.++..+|.|.|.|.+..... +.... .+.|.|..+ +.+|.|...+. ..+ ..|+.++|.|.+.
T Consensus 71 ~sL~I~~v~~~D~G~Y~C~~~~~~~---~~~~~--~~~l~V~~~---~~~p~i~~~~~-~~v-----~~g~~v~l~C~~~ 136 (642)
T 1e07_A 71 ASLLIQNIIQNDTGFYTLHVIKSDL---VNEEA--TGQFRVYPE---LPKPSISSNNS-KPV-----EDKDAVAFTCEPE 136 (642)
T ss_pred CcEEECCCCcccCcEEEEEEEcCCC---eEEEE--EEEEEeccc---CCCCcEEccCc-eeE-----ecCCcEEEEEECC
Confidence 3789999999999999999853211 11122 333444322 23466655432 222 3467799999999
Q ss_pred cCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccc
Q psy12060 220 GYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN 299 (978)
Q Consensus 220 g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~ 299 (978)
| |.+.|+|+|+|.++... ....+...++.|.|.++ +.+|+|.|+|.|.|..|...+..+.|.|.+.|...
T Consensus 137 ~-p~~~v~W~~~g~~l~~~--------~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~ 206 (642)
T 1e07_A 137 T-QDATYLWWVNNQSLPVS--------PRLQLSNGNRTLTLFNV-TRNDTASYKCETQNPVSARRSDSVILNVLYGPDAP 206 (642)
T ss_pred C-CCeeEEEEECCeECCCC--------CceEEcCCCCEEEEeCC-CcccCeeEEEEEecCCCCcccceEEEEEEeCCCCc
Confidence 8 89999999999765321 11112223568999997 89999999999999998876778888888766432
Q ss_pred -cCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeeccccc
Q psy12060 300 -LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTG 378 (978)
Q Consensus 300 -~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~ 378 (978)
..+....+.+|+.++|.|.+ .|.|++.|+|+|+|..+ ..++.|.|.+++.+|+|.|+|.|.|..+...
T Consensus 207 ~~~~~~~~~~~G~~~~l~C~~-~g~p~~~i~W~~~g~~i----------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 275 (642)
T 1e07_A 207 TISPLNTSYRSGENLNLSCHA-ASNPPAQYSWFVNGTFQ----------QSTQELFIPNITVNNSGSYTCQAHNSDTGLN 275 (642)
T ss_pred EEecCCcccccCCEEEEEEEc-CCCCCcEEEEEECCeEc----------ccCCceEEecccccCCeEEEEEEEeCCCceE
Confidence 33444567789999999999 78899999999998764 2346799999999999999999999876433
Q ss_pred ccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceee--ecccEEEeC
Q psy12060 379 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIP 456 (978)
Q Consensus 379 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~--~~~~~L~i~ 456 (978)
. +..+.|.|..++..+.+..++ ...+..|+.++|.|.+.+.| +.++|+++|..+....+.. ..++.|.|.
T Consensus 276 ~-s~~~~v~v~~~~~~p~i~~~~------~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~ 347 (642)
T 1e07_A 276 R-TTVTTITVYAEPPKPFITSNN------SNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLL 347 (642)
T ss_pred E-eeeEEEEEEccCCCCEEEcCC------ceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEe
Confidence 2 234677776654333332211 12345688899999999876 6999999999987655432 346789999
Q ss_pred CCCCCCCeEEEEEEEeCCCce-EEEEEEEEEeecee-eccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCC
Q psy12060 457 NVKVEDQGEYICRASNDRSAL-ESSVTISIQAEPNF-TIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL 534 (978)
Q Consensus 457 ~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~ 534 (978)
++..+|+|.|+|.|.|..|.. +..+.|.|..+|.. ...+....+.+|+.++|.|.+.|.|.+.++|+|+|..+..
T Consensus 348 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~--- 424 (642)
T 1e07_A 348 SVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQH--- 424 (642)
T ss_pred ccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCC---
Confidence 999999999999999998864 45688999877753 3455666789999999999999999999999999988752
Q ss_pred CCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEE--EEEc--CCccccCCCCcceeecCCCeEEEEE
Q psy12060 535 PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR--VLTL--KPSFKKRPLESETYAGEGGNVTIFC 610 (978)
Q Consensus 535 ~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~--v~~~--~p~~~~~~~~~~~~~~~g~~~~l~C 610 (978)
...|.|.++.. +|+|.|+|.|.|..|....+..+. |... +|.+.. .....+.+|++++|.|
T Consensus 425 -----------~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~---~~~~~v~~g~~v~l~C 489 (642)
T 1e07_A 425 -----------TQELFISNITE-KNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISS---NNSKPVEDKDAVAFTC 489 (642)
T ss_pred -----------CceEEEccCCh-hhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEec---CCceeecCCCeEEEEE
Confidence 23689999986 999999999999998776554444 4321 233322 2334578999999999
Q ss_pred eeccCCCCeeEEeeCCEEecCCCcEEEee-cCcEEEccccCCCCEEEEEEEEeCCceeee-eEEEEEEeCCceeeeCCCc
Q psy12060 611 NPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPK 688 (978)
Q Consensus 611 ~~~~~p~~~i~W~~~g~~~~~~~~~~~~~-~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p~~~~~~~~~ 688 (978)
.+.+ |.+.+.|+++|..+..+.++.+.. +++|.|.++..+|+|.|+|.|.|..|...+ .+.|.|..+|..+...+..
T Consensus 490 ~~~~-~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~ 568 (642)
T 1e07_A 490 EPEA-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPD 568 (642)
T ss_pred ECCC-CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCc
Confidence 9984 788999999999998877776654 457999999999999999999999998655 5889998877766666677
Q ss_pred eEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceee
Q psy12060 689 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768 (978)
Q Consensus 689 ~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~ 768 (978)
..+..|+.+.|.|.+.+.|.+ .+.|+++|..+.. +..|.|.++..+|+|.|+|.|.|..|..+.
T Consensus 569 ~~v~~g~~~~l~C~~~g~p~p--~v~W~~~g~~i~~--------------~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 632 (642)
T 1e07_A 569 SSYLSGANLNLSCHSASNPSP--QYSWRINGIPQQH--------------TQVLFIAKITPNNNGTYACFVSNLATGRNN 632 (642)
T ss_pred eeEEcCCcEEEEEEeccCCCC--eEEEEECCEECcc--------------CceEEECcccccCCeEEEEEEEecccCcce
Confidence 889999999999999999876 5699999988743 358999999999999999999999999888
Q ss_pred eEEEEEc
Q psy12060 769 KTTVIVE 775 (978)
Q Consensus 769 ~~~l~v~ 775 (978)
++.|.|.
T Consensus 633 s~~l~V~ 639 (642)
T 1e07_A 633 SIVKSIT 639 (642)
T ss_pred eEEEEEE
Confidence 8877764
No 3
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=5.7e-60 Score=576.52 Aligned_cols=635 Identities=23% Similarity=0.324 Sum_probs=471.2
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEE-cccccccccccccCCCCCCceEeecceEEEeCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 266 (978)
.+|.|+.+|.+.+.. ..|+.++|.|.+.|.|.|+|+|+| ||..+.. ....+....+|+|.|.++ +.
T Consensus 37 ~~P~~~~~p~~~~~~----~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~--------~~~~~~~~~~g~l~i~~~-~~ 103 (816)
T 3dmk_A 37 KGPVFLKEPTNRIDF----SNSTGAEIECKASGNPMPEIIWIRSDGTAVGD--------VPGLRQISSDGKLVFPPF-RA 103 (816)
T ss_dssp EEEEEEECCCSEEEE----ETTTCEEEECEEEEESCCEEEEEETTSCBCCC--------BTTTBEECSTTEEEECCC-CG
T ss_pred CCCcEEeCCCCeEEE----ECCCCeEEEeeecCCCCCEEEEEeCCCCCccC--------CCceEEEeeCCcEEEcCC-Ch
Confidence 468999999886532 235569999999999999999999 7755431 122344567889999887 66
Q ss_pred CC------CeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCC--ceEEEeccccccc
Q psy12060 267 ED------RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG--VNYYWARDYFPNF 338 (978)
Q Consensus 267 ~d------~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~--~~i~W~~~~~~~~ 338 (978)
+| +|.|+|.|.|..|...|..+.|.+...+.+.....+..+.+|+.++|.|.++.+.+. +.+.|+|++..+.
T Consensus 104 ~~~~~~~d~G~Y~C~a~n~~G~~~S~~~~v~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~ 183 (816)
T 3dmk_A 104 EDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENY 183 (816)
T ss_dssp GGCCHHHHEEEEEEEEEETTEEEEEEEEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCHHHHTTEEEEEEEETTSCEE
T ss_pred HHccccccceEEEEEEecCcceEEccceEEEEEEccccEEEEecceEecCceEEEEECCCccccccEEEEEEEecCceEe
Confidence 65 899999999999998889898887777666666667788899999999998655444 6899999986643
Q ss_pred cc---ccceEEEeeCCcEEEeeeeeecc-eeeEEEEEeecccccc-cCCceeEEEccCCCccccccCCCCCCCCCCCCCC
Q psy12060 339 VE---EDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGR-NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKA 413 (978)
Q Consensus 339 ~~---~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~~~n~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~ 413 (978)
.. ...|+.+..+|+|.|.+++.+|+ |.|+|.+.|....... ......|.|..+.......+.. ........+.+
T Consensus 184 ~~~~~~~~r~~~~~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~-~~~~~~~~v~~ 262 (816)
T 3dmk_A 184 FPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVS-LAKFDMKTYSG 262 (816)
T ss_dssp CBSSCBTTTEEECTTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCCG-GGGEEEEEECT
T ss_pred ccccCCCceEEEecCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCcccc-ccCccceEEeC
Confidence 22 35688888899999999999999 9999999986533222 2223456665432211100000 00001235679
Q ss_pred CCcEEEEEEEeecCCCeeEEEEcCccCC------CCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEe
Q psy12060 414 GDKVRLECVAFGYPVPSYNWTRRGSPLP------RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487 (978)
Q Consensus 414 G~~~~l~C~~~g~p~~~v~W~~~~~~l~------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 487 (978)
|++++|.|.+.|.|.|.|+|+|++.... ...+....+++|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 263 g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 342 (816)
T 3dmk_A 263 SSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTA 342 (816)
T ss_dssp TSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECE
T ss_pred CCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcC
Confidence 9999999999999999999999654332 2223344567999999999999999999999999988889999998
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a 567 (978)
+|.+...+....+.+|++++|.|.+.|.|.+.++|+|+|..+... ...|.|.++.. +|+|.|+|.|
T Consensus 343 ~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~-------------~~~L~i~~v~~-~d~G~Y~C~a 408 (816)
T 3dmk_A 343 PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS-------------ESVLRIESVKK-EDKGMYQCFV 408 (816)
T ss_dssp EEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCC-------------SSEEEESSCCG-GGCEEEEEEE
T ss_pred CCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCC-------------CCEEEEcCCCH-HHCEEEEEEE
Confidence 888877777788999999999999999999999999999988631 34799999986 9999999999
Q ss_pred EcCCCceeeEEEEEEEE--cCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEe----ecC
Q psy12060 568 KNQLKTRYSSAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF----ENG 641 (978)
Q Consensus 568 ~n~~g~~~~~~~l~v~~--~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~----~~~ 641 (978)
.|..|....+..+.|.. .+|.+...+ ....+.+|+.+.|.|.+.|.|.+.++|+++|..+....++... .++
T Consensus 409 ~n~~g~~~~~~~l~v~~~~~~p~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~ 486 (816)
T 3dmk_A 409 RNDRESAEASAELKLGGRFDPPVIRQAF--QEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNG 486 (816)
T ss_dssp ECSSCEEEECCEEECCCSSCCCEEEEEC--CCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTS
T ss_pred ECCCCcEEEEEEEEEccccCCCceEecC--cceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCC
Confidence 99998877777777643 234443322 3345789999999999999999999999999999877665542 222
Q ss_pred ----cEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEee
Q psy12060 642 ----NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 717 (978)
Q Consensus 642 ----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~ 717 (978)
.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+ ..+....+..|+.+.|.|.+.+.|.+ .+.|++
T Consensus 487 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~--~~~~~~~v~~G~~v~l~C~~~g~p~~--~i~W~k 562 (816)
T 3dmk_A 487 DVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYI--RQMEKKAIVAGETLIVTCPVAGYPID--SIVWER 562 (816)
T ss_dssp CEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEE--CCCCCEEEETTCCEEEECCEECSSEE--EEEEEE
T ss_pred CcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCee--EccCCeEEecCCeEEEEEEecCCCCC--EEEEEE
Confidence 4999999999999999999999999999999999877743 23445678899999999999998765 669999
Q ss_pred CCEEccccccccccCCeeecCCceEEEeccC-CCCCEEEEEEEEcCCCc-eeeeEEEEEcCCCCCC----CceEEEEeeC
Q psy12060 718 NGVRIGNMDLNELETPNINIDGGLLEITNAS-FADAGEYECVVKSTVGK-ISTKTTVIVEGPPGLP----GGVQVVEVHK 791 (978)
Q Consensus 718 ~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~g~Y~c~a~n~~G~-~s~~~~l~v~~~P~~P----~~~~~~~~~~ 791 (978)
+|..+.... ......++.|.|.++. ..|+|.|+|.|.|..|. .+..+.+.+..+|... .... ...+
T Consensus 563 ~~~~l~~~~------~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~--~~~G 634 (816)
T 3dmk_A 563 DNRALPINR------KQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGP--AQVG 634 (816)
T ss_dssp TTEESCCST------TEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSC--EESS
T ss_pred CCeEcccCC------ceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccc--cCCC
Confidence 999875422 2223356789999998 58999999999999995 4456777777766432 1222 2456
Q ss_pred CeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCC
Q psy12060 792 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 871 (978)
Q Consensus 792 ~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~ 871 (978)
..+.|.+.... +.+-..+.++. .+... .................++|.+ +.....+.|+|.|.|..|....
T Consensus 635 ~~v~L~C~~~~--~~~~~~i~W~~--~g~~l----~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~g~~~~ 705 (816)
T 3dmk_A 635 QYLTLHCSVPG--GDLPLNIDWTL--DGQAI----SEDLGITTSRVGRRGSVLTIEA-VEASHAGNFTCHARNLAGHQQF 705 (816)
T ss_dssp CEEEEEEBCCC--SSSCCEEEEEE--TTBCC----CGGGTCEEEEETTTEEEEEEES-CCGGGCEEEEEEEECSSCEEEE
T ss_pred CeEEEEEEEeC--CCCCCEEEEEE--CCeEc----CCCCCeeEEEcCCCeeEEEEcc-CChhhCEEEEEEEEeCCccEEE
Confidence 78888887532 22212344332 22110 0000000001112335577888 9999999999999999997754
Q ss_pred CC
Q psy12060 872 SS 873 (978)
Q Consensus 872 s~ 873 (978)
+.
T Consensus 706 ~~ 707 (816)
T 3dmk_A 706 TT 707 (816)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 4
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=5.5e-59 Score=567.83 Aligned_cols=592 Identities=22% Similarity=0.298 Sum_probs=436.2
Q ss_pred ceeeeecCCCcc-eeeEEEecccccceeecccceeeeeecccCCCCCCCCCeeEeCC--CceEecCCCccccCcEEEEEE
Q psy12060 141 RWGFERVTGMEP-LLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQP--TDVVFDLSKRSILNDITLSCY 217 (978)
Q Consensus 141 ~~~~~~~~~~~~-~~~~C~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~P~~~~~p--~~~~~~~~~~~~g~~~~l~C~ 217 (978)
.|.|.++..+|. |.|.|.+.............. ..+.+..+ ....+|.+...+ ....+ ..|+.++|.|.
T Consensus 200 ~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~--~~l~v~~~-~~~~~P~i~~~~~~~~~~v-----~~g~~v~L~C~ 271 (816)
T 3dmk_A 200 ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATK--GRLVITEP-ISSAVPKVVSLAKFDMKTY-----SGSSTMALLCP 271 (816)
T ss_dssp CEEESSCCGGGSSCEEEEEEEETTTCCEEECSBC--EEEEEECC-CSCCCCBCCGGGGEEEEEE-----CTTSCEEECCC
T ss_pred eEEEecCChhhccceeEEEEeeeeeeeeeecccc--cceEEeCC-CCCCCCccccccCccceEE-----eCCCeEEEEEE
Confidence 689999999998 999999853221111111111 12333332 222345554332 22332 34677999999
Q ss_pred eecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecc
Q psy12060 218 AGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE 297 (978)
Q Consensus 218 ~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~ 297 (978)
+.|.|.|++.|+|++......... ....+....+++|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.|..++.
T Consensus 272 ~~g~p~p~v~W~k~~~~~~~~~~~----~~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~ 345 (816)
T 3dmk_A 272 AQGYPVPVFRWYKFIEGTTRKQAV----VLNDRVKQVSGTLIIKDA-VVEDSGKYLCVVNNSVGGE-SVETVLTVTAPLS 345 (816)
T ss_dssp CBCSSCCEEEEEEECTTSSCEEEC----CCSSSEEEETTEEEECSC-CGGGCEEEEEEEECSSCEE-EEEEEEEECEEEE
T ss_pred eeecCCCeEEEEeCCCCCccCcce----ecCCceEeccceEEECCC-CHhHCEEEEEEEEcCCCce-EEEEEEEEcCCCc
Confidence 999999999999976432211111 123445556789999998 8999999999999999875 4567777776665
Q ss_pred cccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeecccc
Q psy12060 298 FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDT 377 (978)
Q Consensus 298 ~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~ 377 (978)
+...+....+..|+.++|.|.+ .+.|.+.|+|+|+|.++.. .++.|.|.+++.+|+|.|+|.|.|..+..
T Consensus 346 ~~~~~~~~~v~~G~~v~l~C~~-~g~p~~~v~W~k~g~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 415 (816)
T 3dmk_A 346 AKIDPPTQTVDFGRPAVFTCQY-TGNPIKTVSWMKDGKAIGH---------SESVLRIESVKKEDKGMYQCFVRNDRESA 415 (816)
T ss_dssp EEEESSEEECCTTSCEEEEEEE-EEECCCEEEEEETTEECSC---------CSSEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred eeeCCCceEecCCCCEEEEEEE-eccCCCEEEEEECCEECCC---------CCCEEEEcCCCHHHCEEEEEEEECCCCcE
Confidence 5555556677889999999998 5778999999999876421 24679999999999999999999987533
Q ss_pred cccCCceeEEEcc--CCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeee-------
Q psy12060 378 GRNGPFFPLKVFP--HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN------- 448 (978)
Q Consensus 378 ~~~~~~~~l~V~~--~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~------- 448 (978)
.. .+.|.|.. .++..... + ....+.+|+.++|.|.+.|.|.+.|+|++++..+........
T Consensus 416 ~~---~~~l~v~~~~~~p~i~~~-~------~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~ 485 (816)
T 3dmk_A 416 EA---SAELKLGGRFDPPVIRQA-F------QEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVN 485 (816)
T ss_dssp EE---CCEEECCCSSCCCEEEEE-C------CCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTT
T ss_pred EE---EEEEEEccccCCCceEec-C------cceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecC
Confidence 22 24555532 22211111 1 123567899999999999999999999999999876543321
Q ss_pred --cccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECC
Q psy12060 449 --FNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526 (978)
Q Consensus 449 --~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g 526 (978)
....|.|.++..+|+|.|+|.|.|..|....++.|.|..+|.+.. +....+.+|++++|.|.+.+.|.+.+.|+|+|
T Consensus 486 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~ 564 (816)
T 3dmk_A 486 GDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQ-MEKKAIVAGETLIVTCPVAGYPIDSIVWERDN 564 (816)
T ss_dssp SCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECC-CCCEEEETTCCEEEECCEECSSEEEEEEEETT
T ss_pred CCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEc-cCCeEEecCCeEEEEEEecCCCCCEEEEEECC
Confidence 123699999999999999999999999999999999998886643 44467889999999999999999999999999
Q ss_pred EECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCcee-eEEEEEEEEcCCccccCCCCcceeecCCCe
Q psy12060 527 ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY-SSAQLRVLTLKPSFKKRPLESETYAGEGGN 605 (978)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~ 605 (978)
..+... .......++.|.|.++....|+|.|+|.|.|..|... ....+.|.. +|.+.... .....+..|+.
T Consensus 565 ~~l~~~------~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~-~p~~~~~~-~~~~~~~~G~~ 636 (816)
T 3dmk_A 565 RALPIN------RKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMV-LPRIIPFA-FEEGPAQVGQY 636 (816)
T ss_dssp EESCCS------TTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEEC-CCCCBCCC-CCSSCEESSCE
T ss_pred eEcccC------CceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEec-CCcccccc-ccccccCCCCe
Confidence 988632 1222335678999988622799999999999988543 344555553 44443322 23344789999
Q ss_pred EEEEEeeccCCCC-eeEEeeCCEEecCCCcEEEee----cCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCc
Q psy12060 606 VTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFE----NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680 (978)
Q Consensus 606 ~~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 680 (978)
++|.|.+.+.+++ .+.|+++|..+.......... .+.|.|.++..+|+|.|+|.|.|..|....++.|.|..+|.
T Consensus 637 v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~ 716 (816)
T 3dmk_A 637 LTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPR 716 (816)
T ss_dssp EEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEE
T ss_pred EEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCc
Confidence 9999999876655 999999999886554443322 23599999999999999999999999999999999988887
Q ss_pred eeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEE
Q psy12060 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760 (978)
Q Consensus 681 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~ 760 (978)
+.. .+....+..|+.+.|.|.+.+.|.|. +.|++++..+...........+....+++|.|.++..+|+|.|+|.|.
T Consensus 717 ~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~--i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 793 (816)
T 3dmk_A 717 WIL-EPTDKAFAQGSDAKVECKADGFPKPQ--VTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAI 793 (816)
T ss_dssp EEE-CCCCEEEETTCCEEEECEEEEESCCE--EECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEEEEE
T ss_pred eee-ecccceecCCCcEEEEEEEecCCCCe--EEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEEEEEEE
Confidence 654 45567888999999999999998874 589998765533211111112334456799999999999999999999
Q ss_pred cCCCceeeeEEEEEcCCC
Q psy12060 761 STVGKISTKTTVIVEGPP 778 (978)
Q Consensus 761 n~~G~~s~~~~l~v~~~P 778 (978)
|..|...+++.+..+..|
T Consensus 794 N~~G~~~~~v~~~~~~~~ 811 (816)
T 3dmk_A 794 NGIGSGLSAVIMISVQAH 811 (816)
T ss_dssp CSSSSCEEEEEEEEEEC-
T ss_pred eCCCCCcEEEEEEEeecc
Confidence 999999988877765443
No 5
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=6.8e-58 Score=531.43 Aligned_cols=498 Identities=21% Similarity=0.298 Sum_probs=381.4
Q ss_pred ecccccceeeeecCCCcceeeEEEecccccceeecccceeeeeecccCCCCCCCCCeeEeCCCceEecCCCccccCcEEE
Q psy12060 135 FSQSLKRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYFIKQPTDVVFDLSKRSILNDITL 214 (978)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~P~~~~~p~~~~~~~~~~~~g~~~~l 214 (978)
...+...|.|.++..+|.|.|.|.+. |..+.......+.|. . ...+|.|...+.+.... +|+.++|
T Consensus 56 ~~~~~~~L~I~~v~~~D~G~Y~C~a~----N~~g~~~~~~~l~v~--~---~~~~p~~~~~~~~~~~~-----~G~~v~l 121 (570)
T 3b43_A 56 FKNNVASLVINKVDHSDVGEYTCKAE----NSVGAVASSAVLVIK--E---RKLPPSFARKLKDVHET-----LGFPVAF 121 (570)
T ss_dssp CCTTEEEEEESSCCGGGCEEEEEEEE----ETTEEEEEEEEEEEC--C---CCCCCEESSCCCCEEEE-----TTSCEEE
T ss_pred EECCEEEEEEccCChhhCEEEEEEEE----eCCceEEEEEEEEEC--C---CCCCCcccccCCCeEec-----CCCeEEE
Confidence 34444578999999999999999994 433433333333332 1 12357777767666543 4667999
Q ss_pred EEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEee
Q psy12060 215 SCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF 294 (978)
Q Consensus 215 ~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~ 294 (978)
.|.+.|.|+++|+|||||..+....... ..+....++|.|.++ +.+|+|.|+|.|.|..|... ..+.|.|..
T Consensus 122 ~C~~~g~p~~~v~W~k~g~~l~~~~~~~------~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 193 (570)
T 3b43_A 122 ECRINGSEPLQVSWYKDGELLKDDANLQ------TSFIHNVATLQILQT-DQSHVGQYNCSASNPLGTAS-SSAKLTLSE 193 (570)
T ss_dssp EEEEESSSSCEEEEEETTEECCCCSSEE------EEEETTEEEEEESSC-CGGGCEEEEEEEEETTEEEE-EEEEEEEEC
T ss_pred EEEEccCCCCEEEEEECCEECcCCCCEE------EEEECCEEEEEECcC-ChHHCEEEEEEEEeCCcEEE-EEEEEEEcC
Confidence 9999999999999999997653211100 011122457999887 89999999999999998753 345555532
Q ss_pred ---ecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEee-CCcEEEeeeeeecceeeEEEE
Q psy12060 295 ---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGALYFSALEQIDAGNYSCNV 370 (978)
Q Consensus 295 ---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~ 370 (978)
+|.+...+....+.+|+.++|.|.+ .|.|++.|+|+|++.++......++.... .+.|.|.+++.+|+|.|+|.|
T Consensus 194 ~~~pp~~~~~p~~~~v~~G~~~~l~C~~-~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 272 (570)
T 3b43_A 194 HEVPPFFDLKPVSVDLALGESGTFKCHV-TGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA 272 (570)
T ss_dssp CCCCCEEEECCCCBCCBSBSCEEEEEEE-ESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEE
T ss_pred CCCCCccccCCceeEecCCCeEEEEEEE-EECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEE
Confidence 2333333444567789999999998 57788999999999876433322333333 357999999999999999999
Q ss_pred EeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceee---
Q psy12060 371 QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE--- 447 (978)
Q Consensus 371 ~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~--- 447 (978)
.|..|.. +..+.|.|..+|.+..... ....+.+|+.+.|.|.+.|.|.|.|+|+|++..+.......
T Consensus 273 ~N~~g~~---~~~~~l~V~~~p~~~~~~~-------~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~ 342 (570)
T 3b43_A 273 SNVAGKD---SCSAQLGVQEPPRFIKKLE-------PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSF 342 (570)
T ss_dssp EETTEEE---EEEEEECCBCCCEEEECCC-------SBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEE
T ss_pred ECCCCcE---EEEEEEEeecCCcccccCC-------CccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEE
Confidence 9987643 3346788877665432111 11346789999999999999999999999999987655432
Q ss_pred -ecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECC
Q psy12060 448 -NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526 (978)
Q Consensus 448 -~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g 526 (978)
.....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.+...+....+.+|+++.|.|.+.|.|.+.|+|+|+|
T Consensus 343 ~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g 422 (570)
T 3b43_A 343 VESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDK 422 (570)
T ss_dssp ETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETT
T ss_pred ECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECC
Confidence 2346799999999999999999999999999999999999999988888888899999999999999999999999999
Q ss_pred EECCCCCCCCCCCCcEEE--ec--CEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecC
Q psy12060 527 ELLNSETLPLEDQDRYFI--QD--NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602 (978)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~--~~--~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~ 602 (978)
..+.. ..++.+ .+ ..|.|.++.. +|+|.|+|.|.|..|.....+.|.|. .+|.+...+. ...+..
T Consensus 423 ~~l~~-------~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~A~N~~G~~~~~~~l~v~-~~P~~~~~~~--~~~~~~ 491 (570)
T 3b43_A 423 RELRS-------GKKYKIMSENFLTSIHILNVDS-ADIGEYQCKASNDVGSDTCVGSITLK-APPRFVKKLS--DISTVV 491 (570)
T ss_dssp EECCS-------SSSEEEEEETTEEEEEECSCCG-GGCEEEEEEEECSSCEEEEEEEEEEC-CCCEEEECCC--CBCCBT
T ss_pred EECcC-------CCCEEEEEcCCEEEEEECCCCh-hhCEEEEEEEEECCCeEEEEEEEEec-cCCcccccCC--CceecC
Confidence 99863 233332 22 3789999986 99999999999999998888888876 4677765543 345789
Q ss_pred CCeEEEEEeeccCCCCeeEEeeCCEEec-CCCcEEEeec---CcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 603 g~~~~l~C~~~~~p~~~i~W~~~g~~~~-~~~~~~~~~~---~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
|+.+.|.|.+.|.|++.+.|++++..+. .+.++.+... ++|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 492 g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 492 GEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp TCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred CCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 9999999999999999999999986553 4455555322 369999999999999999999999999999998774
No 6
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=6.9e-55 Score=516.43 Aligned_cols=593 Identities=21% Similarity=0.310 Sum_probs=420.0
Q ss_pred cccCcEEEEEEeecCCCCeEEEEEccccccc--cccccc-------CCCCCCceEe-ecceEEEeCCCCCCCCeEEEEEE
Q psy12060 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDR--LVANLI-------DPLSDKRFTL-SGGNLIINDPRQVEDRGSYHCKA 276 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~--~~~~~~-------~~~~~~~~~~-~~~~l~i~~~~~~~d~G~Y~C~a 276 (978)
.+|++++|.|...+.+.+.|.|||++..... +..... .+....|..+ .+++|.|.++ +.+|+|.|+|.+
T Consensus 12 ~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~~~sL~I~~v-~~~D~G~Y~C~~ 90 (642)
T 1e07_A 12 AEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNI-IQNDTGFYTLHV 90 (642)
T ss_pred cccccEEEEEccCCCCceEEEEECCcccCCcceEEEEEccccccccCccccCceeeccCCcEEECCC-CcccCcEEEEEE
Confidence 4577899999987667789999995432110 000000 0111234333 4679999998 899999999999
Q ss_pred EeCceeEEeEEEEEEEeeecc--cccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEee-CCcE
Q psy12060 277 SNKFGSIISESVQLAFGFIGE--FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY-DGAL 353 (978)
Q Consensus 277 ~n~~g~~~s~~~~l~v~~~~~--~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~L 353 (978)
.+......+..+.|.|...+. .........+..|+.++|.|.+. + |.+.|+|+|+|.++. ...++.+.. ++.|
T Consensus 91 ~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~-~-p~~~v~W~~~g~~l~--~~~~~~~~~~~~~L 166 (642)
T 1e07_A 91 IKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPE-T-QDATYLWWVNNQSLP--VSPRLQLSNGNRTL 166 (642)
T ss_pred EcCCCeEEEEEEEEEecccCCCCcEEccCceeEecCCcEEEEEECC-C-CCeeEEEEECCeECC--CCCceEEcCCCCEE
Confidence 986533334566677655322 11112234567788899999985 4 889999999998753 334554443 4689
Q ss_pred EEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEE
Q psy12060 354 YFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNW 433 (978)
Q Consensus 354 ~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W 433 (978)
.|.+++.+|+|.|+|.|.|..+. ..+..+.|.|...|....+. + ....+.+|+.++|.|.+.|.|.+.|+|
T Consensus 167 ~i~~~~~~d~G~Y~C~a~n~~~~--~~s~~~~l~V~~~p~~~~~~-~------~~~~~~~G~~~~l~C~~~g~p~~~i~W 237 (642)
T 1e07_A 167 TLFNVTRNDTASYKCETQNPVSA--RRSDSVILNVLYGPDAPTIS-P------LNTSYRSGENLNLSCHAASNPPAQYSW 237 (642)
T ss_pred EEeCCCcccCeeEEEEEecCCCC--cccceEEEEEEeCCCCcEEe-c------CCcccccCCEEEEEEEcCCCCCcEEEE
Confidence 99999999999999999998764 22345788888665443322 1 124567999999999999999999999
Q ss_pred EEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEE--EEEEEEEee---ceeeccCCcccccCCCceeE
Q psy12060 434 TRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALES--SVTISIQAE---PNFTIPLTDKHMDNQADLTW 508 (978)
Q Consensus 434 ~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~~---p~~~~~~~~~~~~~g~~~~l 508 (978)
+++|..+.. +..|.|.+++.+|+|.|+|.|.|..|.... .+.|.|..+ |.+.. .....+..|+.+.|
T Consensus 238 ~~~g~~i~~-------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~-~~~~~~~~g~~v~l 309 (642)
T 1e07_A 238 FVNGTFQQS-------TQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITS-NNSNPVEDEDAVAL 309 (642)
T ss_pred EECCeEccc-------CCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEc-CCceeEecCCcEEE
Confidence 999988743 357999999999999999999999886543 456666653 33332 23344566888999
Q ss_pred EEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE--ecCEEEEEeCCCCCCCeEEEEEEEcCCCcee-eEEEEEEEEc
Q psy12060 509 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTRY-SSAQLRVLTL 585 (978)
Q Consensus 509 ~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~ 585 (978)
.|.+.+.| +.+.|+|+|..+.. ..++.+ ..+.|.|.++.. +|+|.|+|.|.|..|... ....|.|...
T Consensus 310 ~C~~~~~p-~~v~W~~~g~~l~~-------~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 380 (642)
T 1e07_A 310 TCEPEIQN-TTYLWWVNNQSLPV-------SPRLQLSNDNRTLTLLSVTR-NDVGPYECGIQNELSVDHSDPVILNVLYG 380 (642)
T ss_pred EEECCCCC-ccEEEEECCccCCC-------cCCEEEeCCCCEEEEeccCc-ccCeeEEEEEeCCCCCcceeeEEEEEEcC
Confidence 99999876 79999999988763 233333 356899999996 999999999999988643 4467777643
Q ss_pred CCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCc
Q psy12060 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 665 (978)
Q Consensus 586 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 665 (978)
++.....+ ....+..|+.++|.|.+.|.|.+.++|+++|..+..+ ..|.|.++..+|+|.|+|.|.|..|
T Consensus 381 p~~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~--------~~L~i~~~~~~d~G~Y~C~a~n~~g 450 (642)
T 1e07_A 381 PDDPTISP--SYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHT--------QELFISNITEKNSGLYTCQANNSAS 450 (642)
T ss_pred CCCCeecC--CceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCC--------ceEEEccCChhhCeEEEEEEEcCCC
Confidence 33223322 3445789999999999999999999999999887543 4599999999999999999999998
Q ss_pred eeeeeE--EEEEEeCC-ceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceE
Q psy12060 666 MDESKG--RLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742 (978)
Q Consensus 666 ~~~~~~--~l~v~~~p-~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l 742 (978)
....+. .+.|...+ ...........+..|+.+.|.|.+.+ |. ..+.|+++|..+.... ...+..++..|
T Consensus 451 ~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~-~~--~~i~W~~~g~~l~~~~-----~~~~~~~~~~L 522 (642)
T 1e07_A 451 GHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEA-QN--TTYLWWVNGQSLPVSP-----RLQLSNGNRTL 522 (642)
T ss_pred CCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCC-CC--cEEEEEECCEeCCCCC-----cEEEcCCCcEE
Confidence 776654 44444322 11222344566789999999999994 33 4679999999886532 12233346799
Q ss_pred EEeccCCCCCEEEEEEEEcCCCcee-eeEEEEEcCCCCC----CCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEee
Q psy12060 743 EITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGL----PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 817 (978)
Q Consensus 743 ~i~~~~~~d~g~Y~c~a~n~~G~~s-~~~~l~v~~~P~~----P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~ 817 (978)
.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|.. |.+..+ ..+..+.|.+... |.|...+.+. .
T Consensus 523 ~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v--~~g~~~~l~C~~~---g~p~p~v~W~--~ 595 (642)
T 1e07_A 523 TLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSY--LSGANLNLSCHSA---SNPSPQYSWR--I 595 (642)
T ss_pred EEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeE--EcCCcEEEEEEec---cCCCCeEEEE--E
Confidence 9999999999999999999999754 4688888866543 233332 3456677777642 2222223332 2
Q ss_pred ccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCC
Q psy12060 818 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 872 (978)
Q Consensus 818 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s 872 (978)
. +..+ .....+.|.+ +.+.....|+|.|.|.+|....+
T Consensus 596 ~--------g~~i--------~~~~~L~i~~-~~~~d~G~Y~C~a~N~~G~~~~s 633 (642)
T 1e07_A 596 N--------GIPQ--------QHTQVLFIAK-ITPNNNGTYACFVSNLATGRNNS 633 (642)
T ss_pred C--------CEEC--------ccCceEEECc-ccccCCeEEEEEEEecccCccee
Confidence 1 1111 1123566777 88888889999999999976543
No 7
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=1.3e-54 Score=527.59 Aligned_cols=593 Identities=17% Similarity=0.223 Sum_probs=115.9
Q ss_pred cceeeeecCCCcceeeEEEecccccceeecccceeeeeecccCCCCCCCCCee---EeCCCceEecCCCcccc--CcEEE
Q psy12060 140 KRWGFERVTGMEPLLFICEASIQKLHYLLNDDRTYQYGMDIENPDKIPRGPYF---IKQPTDVVFDLSKRSIL--NDITL 214 (978)
Q Consensus 140 ~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~P~~---~~~p~~~~~~~~~~~~g--~~~~l 214 (978)
..|.|.+++..|.|.|.|.+. . .. ....+.|.|..+ ..|.+ ...|....+. +| +.++|
T Consensus 86 ~~l~I~~~~~~d~G~Y~C~~~----~--~~--~~~~~~v~v~~~----~~~~~~~~~~~~~~~~v~-----~G~~~~v~L 148 (772)
T 3v2a_R 86 KTLTIPKVIGNDTGAYKCFYR----E--TD--LASVIYVYVQDY----RSPFIASVSDQHGVVYIT-----ENKNKTVVI 148 (772)
T ss_dssp ----------------------------------------------------------CEEEEEEE-----SSCCCEEEE
T ss_pred EEEEECCCcHhhCEeEEEEEc----C--CC--EEEEEEEEECCC----CCCceEcCcccceeEEEe-----cCCCCeEEE
Confidence 367899999999999999983 1 11 122333433322 12222 2233334433 35 66999
Q ss_pred EEEeecCCCCeEEEEEc--ccccccccccccCCCCCCceEeecceEEEeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEE
Q psy12060 215 SCYAGGYPNPSYEWFKE--DYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAF 292 (978)
Q Consensus 215 ~C~~~g~p~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v 292 (978)
.|.+.+ |.+.|.|+|+ +..+. +............|.|.++ +.+|+|.|+|.+.+..+...+....+.+
T Consensus 149 ~C~~~~-p~~~v~w~~~~~~~~~~--------~~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~~~~~~~~~~s~~~~~~v 218 (772)
T 3v2a_R 149 PCLGSI-SNLNVSLCARYPEKRFV--------PDGNRISWDSKKGFTIPSY-MISYAGMVFCEAKINDESYQSIMYIVVV 218 (772)
T ss_dssp CCCCSC-SSCCEEEEEETTTEEEC--------CCSSSCEEETTTEEEEEGG-GTTTCSEEEEEEEETTEEEECCEEEEEE
T ss_pred EccCCC-CCcEEEEEecCCCcccc--------CCCceeecCCCCCeEecCC-ChhhCeEEEEEEEECCceEEEEEEEEEE
Confidence 999986 7789999998 54321 1111112234567889887 8999999999999876665555455544
Q ss_pred eeec--ccccCC-CCeeeecccCeEEEeCCCCC-CCCceEEEecccccccccccce---------EEEeeCCcEEEeeee
Q psy12060 293 GFIG--EFNLKR-APEIGNQNWGKAMFCDPPTN-YPGVNYYWARDYFPNFVEEDKR---------VFVSYDGALYFSALE 359 (978)
Q Consensus 293 ~~~~--~~~~~~-~~~~~~~~~~~~l~C~~~~~-~p~~~i~W~~~~~~~~~~~~~~---------~~~~~~~~L~i~~~~ 359 (978)
...+ .+...+ ....+.+|+.++|.|.+... .|.+.|.|++++..+....... ......+.|.|.+++
T Consensus 219 ~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 298 (772)
T 3v2a_R 219 VGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVT 298 (772)
T ss_dssp ECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCC
T ss_pred ecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCC
Confidence 3222 222222 23578899999999998533 4567999999987632211100 011123479999999
Q ss_pred eecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCcc
Q psy12060 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSP 439 (978)
Q Consensus 360 ~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~ 439 (978)
.+|+|.|+|.+.|..+. .+..+.|.|..+|........ .....+.+|+.++|.|.+.|+|.+.|+|+++|..
T Consensus 299 ~~d~G~Y~C~~~~~~~~---~~~~~~l~V~~~p~~~~~~~~-----~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~ 370 (772)
T 3v2a_R 299 RSDQGLYTCAASSGLMT---KKNSTFVRVHEKPFVAFGSGM-----ESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIP 370 (772)
T ss_dssp STTCSEEEEEEECSSCE---EEEEEEEEEECCCC----------------------------------------------
T ss_pred cCCCeEEEEEEEcCCcc---eeEEEEEEEeCCCeeEeccCC-----CCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEe
Confidence 99999999999987653 234478888876643221100 1124578999999999999999999999999998
Q ss_pred CCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCce--EEEEEEEEEeeceeeccC---CcccccCCCceeEEEEeec
Q psy12060 440 LPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL--ESSVTISIQAEPNFTIPL---TDKHMDNQADLTWTCEAFG 514 (978)
Q Consensus 440 l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~p~~~~~~---~~~~~~~g~~~~l~C~~~~ 514 (978)
+....... ....|.|.++..+|+|.|+|.|.|..|.. +..+.|.|..+|.+.... ....+.+|+.++|.|.+.+
T Consensus 371 l~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g 449 (772)
T 3v2a_R 371 LESNHTIK-AGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYA 449 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCceEc-cceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEecc
Confidence 87644333 44789999999999999999999998765 456778888888764321 1124789999999999999
Q ss_pred CCCCe-eEEeECCEECCC--------------------------CCCCCCCCCcEEE------ecCEEEEEeCCCCCCCe
Q psy12060 515 VPDVT-YSWFRNGELLNS--------------------------ETLPLEDQDRYFI------QDNVLTIRYLNPERDPA 561 (978)
Q Consensus 515 ~p~~~-i~W~~~g~~~~~--------------------------~~~~~~~~~~~~~------~~~~l~i~~~~~~~d~G 561 (978)
.|.+. |.|++++..... .........+... ....|.|..+ +|+|
T Consensus 450 ~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~---~d~G 526 (772)
T 3v2a_R 450 IPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA---NVSA 526 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec---ccCe
Confidence 99886 999997432100 0000000001111 1135666654 6899
Q ss_pred EEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEE----
Q psy12060 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI---- 637 (978)
Q Consensus 562 ~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~---- 637 (978)
.|+|.|.|..|.....+.+.|.. +|.+...+. ..+.+|+++.|.|.+.+.|.+.+.|+++|..+........
T Consensus 527 ~Y~C~a~N~~g~~~~~~~l~V~~-~p~i~~~p~---~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~ 602 (772)
T 3v2a_R 527 LYKCEAVNKVGRGERVISFHVTR-GPEITLQPD---MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPV 602 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEccccccceeEEEEEEC-CceeeccCC---cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccc
Confidence 99999999999888888888874 555544332 3367899999999999999999999999876543221111
Q ss_pred --------------eecC-----cEEEccccCCCCEEEEEEEEeCCceeee--eEEEEE--EeCCceeeeCCCceEEEcc
Q psy12060 638 --------------FENG-----NLLISPVSRDDSGIYSCTATNVHGMDES--KGRLIV--LHGPSYYEQLPPKITIAAH 694 (978)
Q Consensus 638 --------------~~~~-----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v--~~~p~~~~~~~~~~~~~~g 694 (978)
...+ .|.|.++..+|+|.|+|.|.|..|.... ...|.| ..+|.+... +....+..|
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~-~~~~~v~~g 681 (772)
T 3v2a_R 603 CKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGN-LENQTTSIG 681 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecC-CCceEEeCC
Confidence 0122 3999999999999999999996654432 234444 455655433 455778899
Q ss_pred ccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy12060 695 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774 (978)
Q Consensus 695 ~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v 774 (978)
+.+.|.|.+.+.|.|. +.|+++|..+.... ...+...++.|.|.++..+|+|.|+|.|.|..|..+.++.|.|
T Consensus 682 ~~~~l~C~~~g~P~p~--v~W~k~g~~l~~~~-----~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 754 (772)
T 3v2a_R 682 ESIEVSCTASGNPPPQ--IMWFKDNETLVEDS-----GIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII 754 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEEeCccCCCe--EEEEECCeECcCCC-----CeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEE
Confidence 9999999999998774 58999998876532 1222233578999999999999999999999999999999999
Q ss_pred cCCCCCCCc
Q psy12060 775 EGPPGLPGG 783 (978)
Q Consensus 775 ~~~P~~P~~ 783 (978)
.++|+....
T Consensus 755 ~~~p~~~~~ 763 (772)
T 3v2a_R 755 EGAQEKTNL 763 (772)
T ss_dssp ---------
T ss_pred ECCCCcccc
Confidence 999987643
No 8
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=9.8e-48 Score=423.12 Aligned_cols=371 Identities=34% Similarity=0.672 Sum_probs=296.1
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
.+|.|+.+|.+.++..+. +|+.+.|+|.+.|+|.|+|+|+|||.++. ...+.++...+++|+|.+..+.+
T Consensus 4 ~~P~f~~~P~~~~~~~~~--eg~~v~L~C~~~g~P~p~i~W~k~g~~l~--------~~~~~~~~~~~g~l~i~~~~~~~ 73 (384)
T 3kld_A 4 SGPVFVQEPSHVMFPLDS--EEKKVKLSCEVKGNPKPHIRWKLNGTDVD--------IGMDFRYSVVDGSLLINNPNKTQ 73 (384)
T ss_dssp EEEEEEECCCCEEEETTC--SCSEEEECCEEEEESCCEEEEEETTEECC--------C----CEEEETTEEEEESCCHHH
T ss_pred CCCEEEeCCcceEeecCC--CCCeEEEEeEecCCCCCEEEEEECCEECc--------CCCCccEEEECCEEEEcCCCCcc
Confidence 368999999999876543 47889999999999999999999997653 12344566778899998865789
Q ss_pred CCeEEEEEEEeCceeEEeEEEEEEEeeecccccC-CCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEE
Q psy12060 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 346 (978)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 346 (978)
|+|.|+|.|.|..|...+..+.+.+.+.+.+... .....+..|+.+.|.|.++.+.|.+.+.|++++.++. ....++.
T Consensus 74 D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~-~~~~~~~ 152 (384)
T 3kld_A 74 DAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSY-QDNRRFV 152 (384)
T ss_dssp HCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECC-CSSSEEE
T ss_pred cCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCE-eeccEEE
Confidence 9999999999999998888888888877765443 3445678899999999887777889999999987753 2333444
Q ss_pred EeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccC------CCccccccCCCCCCCCCCCCCCCCcEEEE
Q psy12060 347 VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH------SNFQQLKFPNNFPKTFPEAPKAGDKVRLE 420 (978)
Q Consensus 347 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~------~~~~~~~~~~~~~~~~~~~v~~G~~~~l~ 420 (978)
...++.|.|.+++.+|+|.|+|.|.|..+..........+.+... ++...+..+. ...+.+|++++|.
T Consensus 153 ~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~------~~~~~~G~~v~l~ 226 (384)
T 3kld_A 153 SQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPE------TVPAEKGTTVKLE 226 (384)
T ss_dssp CTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCS------EEEEETTSCEEEE
T ss_pred EcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCC------ceEecCCCcEEEE
Confidence 445678999999999999999999998754332222233333210 0000111111 1345789999999
Q ss_pred EEEeecCCCeeEEEEc-CccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCccc
Q psy12060 421 CVAFGYPVPSYNWTRR-GSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 499 (978)
Q Consensus 421 C~~~g~p~~~v~W~~~-~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~ 499 (978)
|.+.|.|.|.+.|+|+ +..+.........+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+...+.+..
T Consensus 227 C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~ 306 (384)
T 3kld_A 227 CFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIH 306 (384)
T ss_dssp EEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEE
T ss_pred EEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceE
Confidence 9999999999999995 445655544455567899999999999999999999999999999999999999888888888
Q ss_pred ccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEE
Q psy12060 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579 (978)
Q Consensus 500 ~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 579 (978)
+..|+++.|.|.+.|.|.+.|+|+|+|..+. ...++.+..+.|.|..+.. +|+|.|+|.|.|..|....++.
T Consensus 307 v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~-------~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~A~N~~G~~~~~a~ 378 (384)
T 3kld_A 307 VAMEESVFWECKANGRPKPTYRWLKNGDPLL-------TRDRIQIEQGTLNITIVNL-SDAGMYQCVAENKHGVIFSSAE 378 (384)
T ss_dssp ECTTCCEEEECEEEEESCCEEEEEETTEECC-------CBTTEEEETTEEEESSCCG-GGCEEEEEEEEETTEEEEEEEE
T ss_pred ecCCCCEEEEeECCccCCCeEEEEECCEECC-------CCccEEEeCCEEEEeecCh-hhCEEEEEEEEeCCceEEeceE
Confidence 9999999999999999999999999999986 4456677788999999986 8999999999999999999999
Q ss_pred EEEE
Q psy12060 580 LRVL 583 (978)
Q Consensus 580 l~v~ 583 (978)
|.|.
T Consensus 379 L~V~ 382 (384)
T 3kld_A 379 LSVI 382 (384)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8875
No 9
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=1.2e-47 Score=442.29 Aligned_cols=438 Identities=16% Similarity=0.206 Sum_probs=319.1
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (978)
||.|...+.+..+. +|+.++|+|.+.| .++|+|++.++ ......++|.|.++ +.+|
T Consensus 36 pP~i~~~~~~~~v~-----~G~~v~l~C~~~~----~v~W~~~~~~~--------------~~~~~~~~L~I~~~-~~~D 91 (524)
T 2ec8_A 36 PPSIHPGKSDLIVR-----VGDEIRLLCTDPG----FVKWTFEILDE--------------TNENKQNEWITEKA-EATN 91 (524)
T ss_dssp CCEEESCCSEEECC-----TTSCEEEEEECTT----EEEEEEESSSC--------------CEEECSSEEEESSC-CSTT
T ss_pred CCccCCCCceEEEe-----CCCeEEEEEeCCc----eEEEcCCCccc--------------cccCccceEEEccc-chhh
Confidence 47777666666644 4667999999987 99999998643 12345678999997 8999
Q ss_pred CeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEec-ccccccccccceEEE
Q psy12060 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR-DYFPNFVEEDKRVFV 347 (978)
Q Consensus 269 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~-~~~~~~~~~~~~~~~ 347 (978)
+|.|+|.|.| |. +..+.|.|..++.+........+.+|+.++|.|.+. +.|.+.|+|+| +|..+ ....++.+
T Consensus 92 ~G~Y~C~a~n--g~--~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~~~~~~v~W~~~~g~~l--~~~~~~~~ 164 (524)
T 2ec8_A 92 TGKYTCTNKH--GL--SNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLT-DPEVTNYSLKGCQGKPL--PKDLRFIP 164 (524)
T ss_dssp CEEEEEEETT--SC--EEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBS-CCCCSCEEEECSSSCCC--CSSCEEEE
T ss_pred CEEEEEeecC--Cc--ceEEEEEECCCCcccccccceEEEcCCeEEEECcCC-CCccceEEEEccCCcCc--CCCCceeE
Confidence 9999999999 54 567778877665554555566788899999999984 55668999998 67653 44567777
Q ss_pred eeCCcEEEeeeeeecce-eeEEEEEeecccccccCCceeEEEccCCCc-cccccCCCCCCCCCCCCCCCCcEEEEEEEee
Q psy12060 348 SYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPFFPLKVFPHSNF-QQLKFPNNFPKTFPEAPKAGDKVRLECVAFG 425 (978)
Q Consensus 348 ~~~~~L~i~~~~~~d~G-~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~-~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g 425 (978)
..++.|.|.+++.+|+| .|+|.|.|..+.. .+..+.|.|...+.. +.+... .....+.+|++++|.|.+.|
T Consensus 165 ~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~--~s~~~~l~V~~~~~~~p~i~~~-----~~~~~v~~G~~v~L~C~~~g 237 (524)
T 2ec8_A 165 DPKAGIMIKSVKRAYHRLCLHCSVDQEGKSV--LSEKFILKVRPAFKAVPVVSVS-----KASYLLREGEEFTVTCTIKD 237 (524)
T ss_dssp ETTTEEEEESCCGGGTTCEEEEEEC----CC--CCCCEECCEECCCCSCCEEECS-----CSEEEEETTSCEEEEEEEEE
T ss_pred CCCccEEEeccchhhCCceEEEEEEECCceE--EEEEEEEEEEeCCCCCCcEEec-----CCcceEEcCCcEEEEEEEec
Confidence 77889999999999999 9999999975432 233467777621111 111111 11235789999999999999
Q ss_pred cCCCe-eEEEEcCccC--CCCce-------eeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccC
Q psy12060 426 YPVPS-YNWTRRGSPL--PRNAY-------FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495 (978)
Q Consensus 426 ~p~~~-v~W~~~~~~l--~~~~~-------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 495 (978)
.|.+. |+|++++..+ ..... .......|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+...+
T Consensus 238 ~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 317 (524)
T 2ec8_A 238 VSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFP 317 (524)
T ss_dssp SSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEE
T ss_pred CCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeec
Confidence 99886 9999999884 32221 12335789999999999999999999999999999999999999876643
Q ss_pred ---CcccccCCCceeEEEEeecCCCCe-eEEeECCEECCCCCCCCCCCCcEEE--------ecCEEEEEeCCCCCCCeEE
Q psy12060 496 ---TDKHMDNQADLTWTCEAFGVPDVT-YSWFRNGELLNSETLPLEDQDRYFI--------QDNVLTIRYLNPERDPAMY 563 (978)
Q Consensus 496 ---~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~g~~~~~~~~~~~~~~~~~~--------~~~~l~i~~~~~~~d~G~Y 563 (978)
....+.+|++++|.|.+.|.|.+. +.|+|+|..+.... .++.. ....|.|.++.. +|+|.|
T Consensus 318 ~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~------~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y 390 (524)
T 2ec8_A 318 MINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKW------EDYPKSENESNIRYVSELHLTRLKG-TEGGTY 390 (524)
T ss_dssp SSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSB------CCEESCCSSSCCEEEEEEEECSCCG-GGCEEE
T ss_pred CCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCc------cceeEEccCCCceeEEEEEEeecCc-ccCeEE
Confidence 356789999999999999999999 99999998886431 12211 234799999986 999999
Q ss_pred EEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEec--------CCCc-
Q psy12060 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--------SGGR- 634 (978)
Q Consensus 564 ~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~--------~~~~- 634 (978)
+|.|.|..|....++.|.|.. +|.+...+. +.+| +|.|.+.|.|.|.|+|++++..+. .+.+
T Consensus 391 ~C~a~N~~g~~~~~~~l~V~~-~P~i~~~~~-----~~~g---~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~ 461 (524)
T 2ec8_A 391 TFLVSNSDVNAAIAFNVYVNT-KPEILTYDR-----LVNG---MLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQT 461 (524)
T ss_dssp EEEEECSSCEEEEEEEEEECE-EEEEEEEEC-----CSSS---CEEEEEEEESCCEEECCCC----------CCCCCCCC
T ss_pred EEEEEecCceEEEEEEEEEec-CCeEeeccc-----CcCc---EEEEEEEeecCCEEEEEECCCcccccccccCCCCcee
Confidence 999999999988888888864 565554322 3455 999999999999999999976652 1111
Q ss_pred --EEEeecCcEE----EccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCc
Q psy12060 635 --RKIFENGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680 (978)
Q Consensus 635 --~~~~~~~~l~----i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 680 (978)
......+.+. +.....+|+|.|+|.|.|..|.....+.|.|.+.|.
T Consensus 462 ~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~ 513 (524)
T 2ec8_A 462 LNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNK 513 (524)
T ss_dssp CCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC-----
T ss_pred eeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCH
Confidence 1223445554 344446999999999999999999999999887654
No 10
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=2.3e-49 Score=481.36 Aligned_cols=628 Identities=19% Similarity=0.247 Sum_probs=121.9
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (978)
+|.|...+.+.++. .|++|+|.|.+.+ .+.|++.+..........+....+ .....+|.|.++ +.+|
T Consensus 31 ~p~l~~~~~~~~v~-----~G~~vtL~C~~~~----~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~~l~I~~~-~~~d 97 (772)
T 3v2a_R 31 LPRLSIQKDILTIK-----ANTTLQITCRGQR----DLDWLWPNNQSGSEQRVEVTECSD---GLFCKTLTIPKV-IGND 97 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEECCCCCeEEEc-----CCCCEEEEEeccC----CeeeeCCCCCCccCCceeEEEcCC---CcEEEEEEECCC-cHhh
Confidence 46665555555543 4667999998763 689998764321111111110000 012457899997 8999
Q ss_pred CeEEEEEEEeCceeEEeEEEEEEEeeecccccC-----CCCeeeecc--cCeEEEeCCCCCCCCceEEEecc--cccccc
Q psy12060 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-----RAPEIGNQN--WGKAMFCDPPTNYPGVNYYWARD--YFPNFV 339 (978)
Q Consensus 269 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~-----~~~~~~~~~--~~~~l~C~~~~~~p~~~i~W~~~--~~~~~~ 339 (978)
+|.|+|.+.+. ..+..+.|.|..+....+. .....+.+| +.++|.|.+.. |.+.++|+|+ +..+..
T Consensus 98 ~G~Y~C~~~~~---~~~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~--p~~~v~w~~~~~~~~~~~ 172 (772)
T 3v2a_R 98 TGAYKCFYRET---DLASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI--SNLNVSLCARYPEKRFVP 172 (772)
T ss_dssp -------------------------------------CEEEEEEESSCCCEEEECCCCSC--SSCCEEEEEETTTEEECC
T ss_pred CEeEEEEEcCC---CEEEEEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCC--CCcEEEEEecCCCccccC
Confidence 99999999732 2234455555422221111 123345667 77999999853 7789999997 554332
Q ss_pred cccceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEE
Q psy12060 340 EEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRL 419 (978)
Q Consensus 340 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l 419 (978)
............|.|.+++.+|+|.|+|.+.+... ...+..+.+.+...+.......++. +..+.+|++++|
T Consensus 173 -~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~--~~~s~~~~~~v~~~~~~~v~~~~~~-----~~~v~~G~~v~L 244 (772)
T 3v2a_R 173 -DGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDE--SYQSIMYIVVVVGYRIYDVVLSPSH-----GIELSVGEKLVL 244 (772)
T ss_dssp -CSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTE--EEECCEEEEEEECCCEEEEEEECCS-----CEEEETTCCEEE
T ss_pred -CCceeecCCCCCeEecCCChhhCeEEEEEEEECCc--eEEEEEEEEEEecCccceeeeCCCC-----ceEEecCCcEEE
Confidence 22333344556799999999999999999997542 2223334444443322211111111 235779999999
Q ss_pred EEEEee--cCCCeeEEEEcCccCCCCce------------eeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEE
Q psy12060 420 ECVAFG--YPVPSYNWTRRGSPLPRNAY------------FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485 (978)
Q Consensus 420 ~C~~~g--~p~~~v~W~~~~~~l~~~~~------------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 485 (978)
.|.+.+ .|.+.|.|++++..+..... .......|.|.+++.+|+|.|+|.+.|..+..+..+.|.|
T Consensus 245 ~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V 324 (772)
T 3v2a_R 245 NCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 324 (772)
T ss_dssp EEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEE
Confidence 999998 45568999999987654321 1223467999999999999999999999998888999999
Q ss_pred EeeceeeccC---CcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeE
Q psy12060 486 QAEPNFTIPL---TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 562 (978)
Q Consensus 486 ~~~p~~~~~~---~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~ 562 (978)
..+|.+...+ ....+.+|++++|.|.+.+.|.+.+.|+|+|..+... ..+ .....|.|.++.. +|+|.
T Consensus 325 ~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~-------~~~-~~~~~L~i~~v~~-~d~G~ 395 (772)
T 3v2a_R 325 HEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESN-------HTI-KAGHVLTIMEVSE-RDTGN 395 (772)
T ss_dssp ECCCC---------------------------------------------------------------------------
T ss_pred eCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCC-------ceE-ccceeEEEecCCh-hcCce
Confidence 9988765432 3456889999999999999999999999999888631 111 1346899999986 99999
Q ss_pred EEEEEEcCCCceeeE--EEEEEEEcCCccccCCCC-cceeecCCCeEEEEEeeccCCCCe-eEEeeCCEE----------
Q psy12060 563 YQCRAKNQLKTRYSS--AQLRVLTLKPSFKKRPLE-SETYAGEGGNVTIFCNPEAAPKPK-FVWKKDGNI---------- 628 (978)
Q Consensus 563 Y~C~a~n~~g~~~~~--~~l~v~~~~p~~~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~g~~---------- 628 (978)
|+|.|.|..|....+ ..+.|. .+|.+...... ....+..|+.++|.|.+.+.|.|. +.|++++..
T Consensus 396 Y~C~a~n~~g~~~~s~~~~l~v~-~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~ 474 (772)
T 3v2a_R 396 YTVILTNPISKEKQSHVVSLVVY-VPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAV 474 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEECCcCeEEEEEEEEEEe-cCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccc
Confidence 999999998866443 445554 35554332111 112367899999999999999996 999997422
Q ss_pred ----------------------ecC-CCcEEEee-----cCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCc
Q psy12060 629 ----------------------IGS-GGRRKIFE-----NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680 (978)
Q Consensus 629 ----------------------~~~-~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 680 (978)
+.. ..+..+.. ...|.|.++ +|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 475 ~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 552 (772)
T 3v2a_R 475 SVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRGPE 552 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEECCce
Confidence 111 00111111 135777766 789999999999999998888998887765
Q ss_pred eeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccccccc-------------CCee--e--cCCceEE
Q psy12060 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE-------------TPNI--N--IDGGLLE 743 (978)
Q Consensus 681 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~-------------~~~~--~--~~~~~l~ 743 (978)
+... +...+..|+.+.|.|.+.+.|.+. +.|+++|..+......... .... . .....|.
T Consensus 553 i~~~--p~~~~~~G~~v~l~C~~~~~p~~~--v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 628 (772)
T 3v2a_R 553 ITLQ--PDMQPTEQESVSLWCTADRSTFEN--LTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIME 628 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecc--CCcccccCCceEEEEeccCCCCCC--cEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEE
Confidence 4432 235577999999999999987664 5899988765332110000 0000 0 0123599
Q ss_pred EeccCCCCCEEEEEEEEcCCCcee--eeEEEEE--cCCCCC---CCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEe
Q psy12060 744 ITNASFADAGEYECVVKSTVGKIS--TKTTVIV--EGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 816 (978)
Q Consensus 744 i~~~~~~d~g~Y~c~a~n~~G~~s--~~~~l~v--~~~P~~---P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~ 816 (978)
|.++..+|+|.|+|.|.|..|... ....+.| ..+|.. |.+..+ ..+..+.|....- |.|...+.+
T Consensus 629 i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v--~~g~~~~l~C~~~---g~P~p~v~W--- 700 (772)
T 3v2a_R 629 LKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTT--SIGESIEVSCTAS---GNPPPQIMW--- 700 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEE--eCCCCEEEEEEeC---ccCCCeEEE---
Confidence 999999999999999999765432 2344444 444432 222212 2234455555421 111111222
Q ss_pred eccccCceEecccccce-eeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCC
Q psy12060 817 TNWNSTWFNVSEHVIGK-EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 874 (978)
Q Consensus 817 ~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~ 874 (978)
.+.+..+... .+....+...++|.+ +.......|+|.|.|.+|....+..
T Consensus 701 -------~k~g~~l~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~N~~G~~~~~~~ 751 (772)
T 3v2a_R 701 -------FKDNETLVEDSGIVLKDGNRNLTIRR-VRKEDEGLYTCQACSVLGCAKVEAF 751 (772)
T ss_dssp -----------------------------------------------------------
T ss_pred -------EECCeECcCCCCeEEcCCCcEEEECc-CCHHHCEEEEEEEEeCCcceeEEEE
Confidence 1111111000 001111234567777 7777788999999999998765443
No 11
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=1.5e-47 Score=441.53 Aligned_cols=461 Identities=17% Similarity=0.204 Sum_probs=324.6
Q ss_pred EEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeeccee
Q psy12060 286 ESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGN 365 (978)
Q Consensus 286 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 365 (978)
..+.|.|..+|.+........+.+|+.++|.|.+. + .|+|+|++.++. .....++|.|.+++.+|+|.
T Consensus 27 ~~i~l~v~~pP~i~~~~~~~~v~~G~~v~l~C~~~-~----~v~W~~~~~~~~-------~~~~~~~L~I~~~~~~D~G~ 94 (524)
T 2ec8_A 27 PSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDP-G----FVKWTFEILDET-------NENKQNEWITEKAEATNTGK 94 (524)
T ss_dssp ------CCCCCEEESCCSEEECCTTSCEEEEEECT-T----EEEEEEESSSCC-------EEECSSEEEESSCCSTTCEE
T ss_pred CeEEcCCCCCCccCCCCceEEEeCCCeEEEEEeCC-c----eEEEcCCCcccc-------ccCccceEEEcccchhhCEE
Confidence 45667777777766555566788999999999984 3 899999998651 23456789999999999999
Q ss_pred eEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEE-cCccCCCCc
Q psy12060 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTR-RGSPLPRNA 444 (978)
Q Consensus 366 Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~-~~~~l~~~~ 444 (978)
|+|.|.| |. +..+.|.|..++... . ......+.+|+.++|.|.+.+.|.+.|+|++ ++..+....
T Consensus 95 Y~C~a~n--g~----~~~~~l~V~~p~~~~--~------~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~ 160 (524)
T 2ec8_A 95 YTCTNKH--GL----SNSIYVFVRDPAKLF--L------VDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDL 160 (524)
T ss_dssp EEEEETT--SC----EEEEEEECCCSSCSB--C------CCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSC
T ss_pred EEEeecC--Cc----ceEEEEEECCCCccc--c------cccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCC
Confidence 9999988 31 334677777554332 1 1123467899999999999987778999998 788887655
Q ss_pred eee-ecccEEEeCCCCCCCCe-EEEEEEEeCCCce-EEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecCCC
Q psy12060 445 YFE-NFNRILTIPNVKVEDQG-EYICRASNDRSAL-ESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGVPD 517 (978)
Q Consensus 445 ~~~-~~~~~L~i~~~~~~d~G-~Y~C~a~n~~g~~-~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 517 (978)
++. ..++.|.|.+++.+|+| .|+|.|.|..+.. +..+.|.|. .+|.+...+....+.+|++++|.|.+.+.|.
T Consensus 161 ~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~ 240 (524)
T 2ec8_A 161 RFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSS 240 (524)
T ss_dssp EEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESST
T ss_pred ceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCC
Confidence 443 34678999999999999 9999999987665 347888887 6788888887788999999999999999887
Q ss_pred Ce-eEEeECCEEC--CCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCC
Q psy12060 518 VT-YSWFRNGELL--NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPL 594 (978)
Q Consensus 518 ~~-i~W~~~g~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~ 594 (978)
+. +.|+|++..+ .................+.|.|.++.. +|+|.|+|.|.|..|.......|.|.. +|.+...+.
T Consensus 241 p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~ 318 (524)
T 2ec8_A 241 SVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARV-NDSGVFMCYANNTFGSANVTTTLEVVD-KGFINIFPM 318 (524)
T ss_dssp TCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCT-TTCEEEEEEEECSSCEEEEEEEEEEES-SCEEEEEES
T ss_pred cEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCH-HHCEEEEEEEEecCCceEEEEEEEEec-cCceEeecC
Confidence 76 9999999873 211000000011123456899999986 999999999999999988888888874 565544332
Q ss_pred -CcceeecCCCeEEEEEeeccCCCCe-eEEeeCCEEecCCC-cEEEeec-------CcEEEccccCCCCEEEEEEEEeCC
Q psy12060 595 -ESETYAGEGGNVTIFCNPEAAPKPK-FVWKKDGNIIGSGG-RRKIFEN-------GNLLISPVSRDDSGIYSCTATNVH 664 (978)
Q Consensus 595 -~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~g~~~~~~~-~~~~~~~-------~~l~i~~~~~~d~G~Y~C~a~n~~ 664 (978)
.....+.+|+.++|.|.+.|.|.|. ++|+++|..+.... ++....+ .+|.|.++..+|+|.|+|.|.|..
T Consensus 319 ~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 398 (524)
T 2ec8_A 319 INTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSD 398 (524)
T ss_dssp SCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred CCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecC
Confidence 2356688999999999999999998 99999999887665 3333322 369999999999999999999999
Q ss_pred ceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccc-----ccccCCeeecCC
Q psy12060 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL-----NELETPNINIDG 739 (978)
Q Consensus 665 g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~-----~~~~~~~~~~~~ 739 (978)
|.....+.|.|..+|.+..... ...| .|.|.+.|.|.| .+.|++++..+..... ............
T Consensus 399 g~~~~~~~l~V~~~P~i~~~~~----~~~g---~l~C~~~g~P~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (524)
T 2ec8_A 399 VNAAIAFNVYVNTKPEILTYDR----LVNG---MLQCVAAGFPEP--TIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPF 469 (524)
T ss_dssp CEEEEEEEEEECEEEEEEEEEC----CSSS---CEEEEEEEESCC--EEECCCC----------CCCCCCCCCCC-CCSS
T ss_pred ceEEEEEEEEEecCCeEeeccc----CcCc---EEEEEEEeecCC--EEEEEECCCcccccccccCCCCceeeeeccCCC
Confidence 9999999999988887655432 2344 999999999887 4699999766521100 000000111223
Q ss_pred ceEE----EeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCCCc
Q psy12060 740 GLLE----ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783 (978)
Q Consensus 740 ~~l~----i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~ 783 (978)
+.+. +.....+|+|.|+|.|.|..|..+..+.|.|..+|....+
T Consensus 470 g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~~~~ 517 (524)
T 2ec8_A 470 GKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQIH 517 (524)
T ss_dssp SCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC---------
T ss_pred CcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCHHHcC
Confidence 3444 3333469999999999999999999999999887765433
No 12
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-46 Score=425.11 Aligned_cols=420 Identities=14% Similarity=0.144 Sum_probs=283.0
Q ss_pred cccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCCCeEEEEEEEeCceeEEeE
Q psy12060 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE 286 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~ 286 (978)
.+|++++|+|.+.+.|..++.|++++..+.... .+. .+.+.. -+|.|.++ +.+|+|.|+|.|.|..|.. +.
T Consensus 61 ~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~--~~~--~~~r~~---~SL~I~~v-~~~D~G~Y~C~~~n~~~~~-~~ 131 (527)
T 3qs9_E 61 DVSASITLQVLVDAPGNISCLWVFKHSSLNCQP--HFD--LQNRGV---VSMVILKM-TETQAGEYLLFIQSEATNY-TI 131 (527)
T ss_dssp CSSCCEEEEEECSCCSSCEEEEEETTEEECCCC--BC-------CE---EEEEESSC-CSSSCSEEEEEEEC--CEE-EE
T ss_pred eccccEEEEEEEecCCceeEEEEecCCccCccc--ccC--CCcceE---EEEEECcC-ChhhCeeEEEEEEeccccE-EE
Confidence 457789999999988889999999986542111 111 111111 25999998 8999999999999988764 23
Q ss_pred EEEEEEeeecccc-cCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCc--EEEeeeeeecc
Q psy12060 287 SVQLAFGFIGEFN-LKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGA--LYFSALEQIDA 363 (978)
Q Consensus 287 ~~~l~v~~~~~~~-~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--L~i~~~~~~d~ 363 (978)
.++|.|. +.+. ....+.....+..++|.|.+ .|.|.|.|+|++++.+.... ....... .....+..+|+
T Consensus 132 ~~~v~v~--~~~~~~~~~p~~~~~~~~~~L~C~a-~G~P~P~i~W~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~d~ 203 (527)
T 3qs9_E 132 LFTVSIR--NTLLYTLRRPYFRKMENQDALVCIS-ESVPEPIVEWVLCDSQGESC-----KEESPAVVKKEEKVLHELFG 203 (527)
T ss_dssp EEEEEEC-------CEEEEEEEECSSSSCEEEEE-EESSCCEEEEEEC------------------CEEECCSEECCCCS
T ss_pred EEEEEEC--CceeeccCCCcEEecCCceEEEEEE-ceecCCeEEEEECCCCCccc-----cccCCcEEEEeeeeccccCC
Confidence 3444443 2222 11222334556778999998 78999999999987653210 0111111 22334557899
Q ss_pred eeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEe-ecCCCeeEEEEcCccCCC
Q psy12060 364 GNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF-GYPVPSYNWTRRGSPLPR 442 (978)
Q Consensus 364 G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~l~~ 442 (978)
|.|+|.|.|..|.... ..+.|.|...|.. ++ ....+.+|+.++|.|.+. |.|.+.|+|+|++..+..
T Consensus 204 G~Y~C~A~N~~G~~~~--~~~~l~V~~~p~~-----~p-----~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~ 271 (527)
T 3qs9_E 204 TDIRCCARNELGRECT--RLFTIDLNQTPQT-----TL-----PQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEE 271 (527)
T ss_dssp SCEEEEEECSSCEEEE--ECEEEESSSCCCC-----SC-----CEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCG
T ss_pred EEEEEEEEeCCCcccc--eEEEEEEeccCcc-----CC-----CceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCC
Confidence 9999999998865433 2367777665532 11 134678999999999997 899999999999998865
Q ss_pred Ccee----------eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccC--CcccccCCCceeEEE
Q psy12060 443 NAYF----------ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL--TDKHMDNQADLTWTC 510 (978)
Q Consensus 443 ~~~~----------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C 510 (978)
.... .....+|.|.+++.+|+|.|+|.|.|. .+.++.|.|..+|.+...+ ....+.+|+.+.|.|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C 348 (527)
T 3qs9_E 272 GNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSV 348 (527)
T ss_dssp GGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEE
T ss_pred CceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEE
Confidence 4322 122356999999999999999999987 6778899999888776543 345678999999999
Q ss_pred EeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccc
Q psy12060 511 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK 590 (978)
Q Consensus 511 ~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~ 590 (978)
.+.|.|.|.|+|+|+|..+... .+.......|.|.++.. +|+|.|+|.|.|..|.....+.|.|. .+|.+.
T Consensus 349 ~~~g~P~p~i~W~k~g~~l~~~-------~~~~~~~~~L~I~~v~~-~D~G~YtC~A~N~~g~~~~~~~L~V~-~~P~i~ 419 (527)
T 3qs9_E 349 RFKAYPQIRCTWTFSRKSFPCE-------QKGLDNGYSISKFCNHK-HQPGEYIFHAENDDAQFTKMFTLNIR-RKPQVL 419 (527)
T ss_dssp EEEEESCCEEEEEETTEEEECB-------CCBCSSSSEEEEECCCT-TCCSCEEEEEEETTEEEEEEEEEC---CCCEEE
T ss_pred EEEecCCCEEEEEECCEECcCC-------cccccCCcEEEEecCCc-ccCEEEEEEEEeCCCcEEEEEEEEEe-cCCeEE
Confidence 9999999999999999998632 12223456899999996 99999999999999988888888887 466665
Q ss_pred cCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCc-------------EEEee-cCcEEEccccCCCCEEE
Q psy12060 591 KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR-------------RKIFE-NGNLLISPVSRDDSGIY 656 (978)
Q Consensus 591 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~-------------~~~~~-~~~l~i~~~~~~d~G~Y 656 (978)
..+ .| ..|.|.+.|.|.|.|+|++++........ ..... ...+.+.-...+|+|.|
T Consensus 420 ~~~--------~~--~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y 489 (527)
T 3qs9_E 420 AEA--------SA--SQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLV 489 (527)
T ss_dssp ECC--------CC--E---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEE
T ss_pred EeC--------CC--CEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEE
Confidence 432 12 35799999999999999987654321100 00000 01123333345699999
Q ss_pred EEEEEeCCceeeeeEEEEEEe
Q psy12060 657 SCTATNVHGMDESKGRLIVLH 677 (978)
Q Consensus 657 ~C~a~n~~g~~~~~~~l~v~~ 677 (978)
+|.|.|..|.....+.|.|..
T Consensus 490 ~C~A~N~~G~~~~~~~L~V~~ 510 (527)
T 3qs9_E 490 KCCAYNSLGTSCETILLNSPG 510 (527)
T ss_dssp EEEEECSSCEEEEEEEC----
T ss_pred EEEEEeCCCCceeEEEEecCC
Confidence 999999999999999887754
No 13
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=7.6e-45 Score=425.72 Aligned_cols=456 Identities=18% Similarity=0.208 Sum_probs=330.5
Q ss_pred CCCceEecCCCccccCcEEEEEEeecCCCC---eEEEEEccccccc--ccc--cccCCCCCCceEee----cc--eEEEe
Q psy12060 195 QPTDVVFDLSKRSILNDITLSCYAGGYPNP---SYEWFKEDYVQDR--LVA--NLIDPLSDKRFTLS----GG--NLIIN 261 (978)
Q Consensus 195 ~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~---~v~W~~~~~~~~~--~~~--~~~~~~~~~~~~~~----~~--~l~i~ 261 (978)
.|.+..+. +|+.++|.|.+.+.|.+ .|.|+|++..+.. +.. .........|+.+. ++ +|.|.
T Consensus 6 ~P~~v~v~-----~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~ 80 (585)
T 2ocw_A 6 GPEEVNSV-----EGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIA 80 (585)
T ss_pred CcceeEEe-----cCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEEC
Confidence 35555543 46679999999988754 8999999864320 000 00011122344432 22 68898
Q ss_pred CCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccc--
Q psy12060 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV-- 339 (978)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~-- 339 (978)
++ +.+|+|.|+|.|.|..|.. +..+.|.|..+|.+...+....+.+|+.++|.|.+..+.|++.+.|+|++.....
T Consensus 81 ~v-~~~D~G~Y~C~~~n~~~~~-~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~ 158 (585)
T 2ocw_A 81 QL-SQDDSGRYKCGLGINSRGL-SFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLV 158 (585)
T ss_pred CC-CcccCEEEEEEcccCCCCc-eEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEE
Confidence 97 8999999999999988764 5678888888887766667778889999999999966667788999999764211
Q ss_pred -c--------ccceEEEeeCC------cEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCC
Q psy12060 340 -E--------EDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFP 404 (978)
Q Consensus 340 -~--------~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~ 404 (978)
. ...++.+..++ +|.|.+++.+|+|.|+|.|.|..+. ....+.|.|..+++.
T Consensus 159 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~---~~~~~~l~V~~~~p~---------- 225 (585)
T 2ocw_A 159 IDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNS---NKKNADLQVLKPEPE---------- 225 (585)
T ss_pred ecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCcc---ccceEEEEEccCCCc----------
Confidence 1 12445554444 6999999999999999999987754 334578888764421
Q ss_pred CCCCCCCCCCCcEEEEEEEeecCC---CeeEEE-EcCccCC------------CCceeee----ccc--EEEeCCCCCCC
Q psy12060 405 KTFPEAPKAGDKVRLECVAFGYPV---PSYNWT-RRGSPLP------------RNAYFEN----FNR--ILTIPNVKVED 462 (978)
Q Consensus 405 ~~~~~~v~~G~~~~l~C~~~g~p~---~~v~W~-~~~~~l~------------~~~~~~~----~~~--~L~i~~~~~~d 462 (978)
...+.+|+.++|.|.+ +.|. +.+.|+ +++..+. ...++.. .++ .|.|.+++.+|
T Consensus 226 ---~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d 301 (585)
T 2ocw_A 226 ---LVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKED 301 (585)
T ss_pred ---eeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhh
Confidence 1235689999999997 4444 688897 7774211 0111111 123 79999999999
Q ss_pred CeEEEEEEEeCCCce----EEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCee----EEeE--CCE--ECC
Q psy12060 463 QGEYICRASNDRSAL----ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTY----SWFR--NGE--LLN 530 (978)
Q Consensus 463 ~G~Y~C~a~n~~g~~----~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i----~W~~--~g~--~~~ 530 (978)
+|.|+|.|.|..+.. ...+.|.|..+|.+...+....+.+|++++|.|.+.+.|.+.+ .|+| +|. .+.
T Consensus 302 ~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~ 381 (585)
T 2ocw_A 302 AGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLV 381 (585)
T ss_pred CEEEEEEEEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceee
Confidence 999999999953333 2788999999999888777788899999999999999988877 7999 887 443
Q ss_pred CC--CCCCCCCCcEEEe----cC--EEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecC
Q psy12060 531 SE--TLPLEDQDRYFIQ----DN--VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602 (978)
Q Consensus 531 ~~--~~~~~~~~~~~~~----~~--~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~ 602 (978)
.. ........++.+. .+ .|.|.++.. +|+|.|+|.| |..|.......|.|...+|.+.. +....+.+
T Consensus 382 ~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~-~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~---~~~~~v~~ 456 (585)
T 2ocw_A 382 DSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTS-RDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKV---PGNVTAVL 456 (585)
T ss_pred eecceeecccCCCEEEeccCCCcEEEEEECCCCh-hhCEEEEEcc-cCCCccceeEEEEEecCcccccc---CCceeEec
Confidence 21 0111123344332 23 389999986 9999999999 88888888888888765555543 24556889
Q ss_pred CCeEEEEEeec----cCCCCeeEEeeCCEEecCCCc-------EEEeec---CcEEEccccCCCCEEEEEEEEeCCceee
Q psy12060 603 GGNVTIFCNPE----AAPKPKFVWKKDGNIIGSGGR-------RKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDE 668 (978)
Q Consensus 603 g~~~~l~C~~~----~~p~~~i~W~~~g~~~~~~~~-------~~~~~~---~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 668 (978)
|+.++|.|.+. +.|.+.|.|+++|..+..... ..+..+ +.|.|.++..+|+|.|+|.|.|..|...
T Consensus 457 G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 536 (585)
T 2ocw_A 457 GETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGE 536 (585)
T ss_pred CCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccE
Confidence 99999999997 677889999999987754321 111112 3699999999999999999999998776
Q ss_pred ee-EEEEEEeCC
Q psy12060 669 SK-GRLIVLHGP 679 (978)
Q Consensus 669 ~~-~~l~v~~~p 679 (978)
.. +.|.|..+|
T Consensus 537 ~~~~~l~V~~~p 548 (585)
T 2ocw_A 537 TAAVYVAVEERK 548 (585)
T ss_pred EEEEEEEEEeee
Confidence 54 788888766
No 14
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-46 Score=426.60 Aligned_cols=440 Identities=12% Similarity=0.092 Sum_probs=291.7
Q ss_pred CeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCC--cEEEeeeeeecceeeEEEEEeecccccccC
Q psy12060 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDG--ALYFSALEQIDAGNYSCNVQSKVSDTGRNG 381 (978)
Q Consensus 304 ~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 381 (978)
+..+.+|++++|.|.+ .+.|...+.|++++..+.. ...+.....+ +|.|.+++.+|+|.|+|.|.|..+.. .
T Consensus 57 ~~~v~~g~~~~L~c~~-~~~~~~~~~W~~~~~~l~~--~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~---~ 130 (527)
T 3qs9_E 57 AVEVDVSASITLQVLV-DAPGNISCLWVFKHSSLNC--QPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNY---T 130 (527)
T ss_dssp EEEECSSCCEEEEEEC-SCCSSCEEEEEETTEEECC--CCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEE---E
T ss_pred eEEEeccccEEEEEEE-ecCCceeEEEEecCCccCc--ccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccE---E
Confidence 5678899999999998 5667789999999775321 1111111111 49999999999999999999876432 2
Q ss_pred CceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCC
Q psy12060 382 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVE 461 (978)
Q Consensus 382 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~ 461 (978)
..+.|.|...+ ..... .+.....|+.++|.|.+.|+|.|.|+|++++..+.................+...
T Consensus 131 ~~~~v~v~~~~--~~~~~-------~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (527)
T 3qs9_E 131 ILFTVSIRNTL--LYTLR-------RPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHEL 201 (527)
T ss_dssp EEEEEEEC-------CEE-------EEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCC
T ss_pred EEEEEEECCce--eeccC-------CCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeecccc
Confidence 23555554211 10000 0112245778899999999999999999998876432211111112223335578
Q ss_pred CCeEEEEEEEeCCCceEEE-EEEEEEeeceeeccCCcccccCCCceeEEEEee-cCCCCeeEEeECCEECCCCCCC---C
Q psy12060 462 DQGEYICRASNDRSALESS-VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLP---L 536 (978)
Q Consensus 462 d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~---~ 536 (978)
|+|.|+|.|.|..|..... +.|.|..+|.+ ++....+.+|+++.|.|.+. +.|.+.|+|+|+|..+...... .
T Consensus 202 d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~ 279 (527)
T 3qs9_E 202 FGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMST 279 (527)
T ss_dssp CSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEE
T ss_pred CCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeee
Confidence 9999999999999887654 78888877766 55677889999999999997 8899999999999877532100 0
Q ss_pred CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCC
Q psy12060 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 616 (978)
Q Consensus 537 ~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 616 (978)
....+.......|.|.++.. +|+|.|+|.|.|. ....+.|.|.. +|.+...+......+.+|+.+.|.|.+.|.|
T Consensus 280 ~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~N~---~~~~~~L~V~~-~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P 354 (527)
T 3qs9_E 280 YSTNRTMIRILFAFVSSVAR-NDTGYYTCSSSKH---PSQSALVTIVE-KGFINATNSSEDYEIDQYEEFCFSVRFKAYP 354 (527)
T ss_dssp EETTTEEEEEEEEEESSCCG-GGCEEEEEEETTE---EEEEEEEEEC---CEEECCCSCCEECCCTTCCCCEEEEEEEES
T ss_pred eccCcceeeEEEEEEccCCc-ccCeEEEEEEEeC---CCceEEEEEEc-cCccccccCcccEEEcCCCeEEEEEEEEecC
Confidence 00111223445699999997 9999999999997 55666777764 4555544443446678999999999999999
Q ss_pred CCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEcccc
Q psy12060 617 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 696 (978)
Q Consensus 617 ~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~ 696 (978)
.|.|+|+|+|..+....+. ....++|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+.... ..
T Consensus 355 ~p~i~W~k~g~~l~~~~~~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~---------~~ 424 (527)
T 3qs9_E 355 QIRCTWTFSRKSFPCEQKG-LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEA---------SA 424 (527)
T ss_dssp CCEEEEEETTEEEECBCCB-CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECC---------CC
T ss_pred CCEEEEEECCEECcCCccc-ccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeC---------CC
Confidence 9999999999998765442 2245579999999999999999999999999999999998888765432 12
Q ss_pred EEEEEEeeecCCcCeEEEEeeCCEEccccccccc------c--CCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceee
Q psy12060 697 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL------E--TPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 768 (978)
Q Consensus 697 ~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~------~--~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~ 768 (978)
..|.|.+.|.|.| .+.|++++........... . ..........+.+.....+|+|.|+|.|.|.+|..+.
T Consensus 425 ~~l~C~a~g~P~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~ 502 (527)
T 3qs9_E 425 SQASCFSDGYPLP--SWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCE 502 (527)
T ss_dssp E---EEEECSSCC--EEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEE
T ss_pred CEEEEEEEEEcCC--eEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCcee
Confidence 3579999999887 5699987654421110000 0 0000001112333333457999999999999999999
Q ss_pred eEEEEEcCC
Q psy12060 769 KTTVIVEGP 777 (978)
Q Consensus 769 ~~~l~v~~~ 777 (978)
.+.|.|.++
T Consensus 503 ~~~L~V~~p 511 (527)
T 3qs9_E 503 TILLNSPGP 511 (527)
T ss_dssp EEEC-----
T ss_pred EEEEecCCC
Confidence 999877553
No 15
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=7.7e-45 Score=401.32 Aligned_cols=371 Identities=35% Similarity=0.611 Sum_probs=299.6
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCC-
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV- 266 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~- 266 (978)
.+|.|+.+|.+.++.++ ..|+.++|.|.+.|.|.++|.|+|+|.++. ...+.++...+++|.|.++ ..
T Consensus 3 ~~P~~~~~p~~~~~~~~--~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~--------~~~~~~~~~~~~~L~i~~~-~~~ 71 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEG--SAEEKVTLTCRARANPPATYRWKMNGTELK--------MGPDSRYRLVAGDLVISNP-VKA 71 (382)
T ss_dssp EEEEEEECCCCEEEETT--CSCCEEEECCEEEEESCCEEEEEETTEECC--------CSTTSSEEEETTEEEEESC-CHH
T ss_pred CCCEEEECCCcEEEecC--CCCCcEEEEEEecCCCCCEEEEEECCEECC--------cCCCccEEeeCCeEEEecc-ccc
Confidence 36899999999987543 247889999999999999999999997653 2234566777889999997 55
Q ss_pred CCCeEEEEEEEeCceeEEeEEEEEEEeeecccccC-CCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceE
Q psy12060 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV 345 (978)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 345 (978)
+|+|.|+|.|.|..|...+..+.|.|.+.+.+... .....+.+|+.++|.|.+..+.|.+.|.|+|++.++......+.
T Consensus 72 ~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 151 (382)
T 1cs6_A 72 KDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRR 151 (382)
T ss_dssp HHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSE
T ss_pred ccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceE
Confidence 99999999999999988777888888877765543 45567889999999999877788899999999987654444554
Q ss_pred EEee-CCcEEEeeeeeecceeeEEEEEeeccccc--ccCCceeEEEccCCC---ccccccCCCCCCCCCCCCCCCCcEEE
Q psy12060 346 FVSY-DGALYFSALEQIDAGNYSCNVQSKVSDTG--RNGPFFPLKVFPHSN---FQQLKFPNNFPKTFPEAPKAGDKVRL 419 (978)
Q Consensus 346 ~~~~-~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~--~~~~~~~l~V~~~~~---~~~~~~~~~~~~~~~~~v~~G~~~~l 419 (978)
.+.. ++.|.|.+++.+|+|.|+|.+.|..+... ..+..+.|.|..... .+.+... ......+.+|+.++|
T Consensus 152 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~----~~~~~~~~~G~~v~l 227 (382)
T 1cs6_A 152 FVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAK----FPADTYALTGQMVTL 227 (382)
T ss_dssp EECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEEC----CCSEEEEETTCCEEE
T ss_pred EEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceecc----CCCceEEeCCCeEEE
Confidence 4443 47899999999999999999999874321 113345566543210 0111110 011245679999999
Q ss_pred EEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCccc
Q psy12060 420 ECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKH 499 (978)
Q Consensus 420 ~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~ 499 (978)
.|.+.|.|.+.+.|+|++..+.. ........|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+...+....
T Consensus 228 ~C~~~g~p~~~i~W~~~~~~~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~ 305 (382)
T 1cs6_A 228 ECFAFGNPVPQIKWRKLDGSQTS--KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTE 305 (382)
T ss_dssp ECEEEEESCCEEEEEECCSCCSC--CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEE
T ss_pred EEEEccCCCCEEEEEECCccccc--EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccE
Confidence 99999999999999999988754 2334567899999999999999999999999999999999999999888888888
Q ss_pred ccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEE
Q psy12060 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579 (978)
Q Consensus 500 ~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 579 (978)
+.+|++++|.|.+.|.|.+.+.|+|+|..+. ...++.+..+.|.|.++.. +|+|.|+|.|.|..|....++.
T Consensus 306 ~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~-------~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~~~~ 377 (382)
T 1cs6_A 306 ADIGSDLRWSCVASGKPRPAVRWLRDGQPLA-------SQNRIEVSGGELRFSKLVL-EDSGMYQCVAENKHGTVYASAE 377 (382)
T ss_dssp EETTCCEEEECEEEEESCCEEEEEETTEECC-------CCSSEEEETTEEEESSCCG-GGCEEEEEEEEETTEEEEEEEE
T ss_pred EcCCCeEEEEEEeeeecCCEEEEEECCEECC-------CCceEEEECCEEEECcCCc-ccCEEEEEEEEeCCCeEEEEEE
Confidence 9999999999999999999999999999987 3456677788999999996 9999999999999999988888
Q ss_pred EEEE
Q psy12060 580 LRVL 583 (978)
Q Consensus 580 l~v~ 583 (978)
|.|.
T Consensus 378 l~V~ 381 (382)
T 1cs6_A 378 LTVQ 381 (382)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8875
No 16
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.5e-45 Score=414.66 Aligned_cols=420 Identities=18% Similarity=0.227 Sum_probs=295.3
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecCCCCeE-----EEEEcccccccccccccCCCCCCceEeecceEEEeCCCCC
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSY-----EWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v-----~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 266 (978)
|..+|.+..+.. |+.++|.|.+.| |.|.+ .|+|++..+. +.+. ..|.|.++ +.
T Consensus 2 i~~~P~~~~v~~-----G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~-----------~~~~----~~l~i~~v-~~ 59 (450)
T 1z7z_I 2 TSVSPSKVILPR-----GGSVLVTCSTSC-DQPMLLGIETPLPKKELLLP-----------GNNR----KVYELSNV-QE 59 (450)
T ss_dssp CEEESSEEEEET-----TEEEEEEEECCS-SCCCEEEECSSSCEEECCSS-----------TTTE----EEEEEEEE-CS
T ss_pred cccCCCceEEec-----CCcEEEEEEccC-CCcccccccceeeecceEec-----------CCCc----eEEEEEec-cc
Confidence 345677776644 566999999999 88998 9999985321 1111 26888887 55
Q ss_pred CCCeEEEEEEEeCceeEEeEEEEEEEeeecccc-cCCCCeeeecccCeEEEeCCCCCCCCc---eEEEeccccccccccc
Q psy12060 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFN-LKRAPEIGNQNWGKAMFCDPPTNYPGV---NYYWARDYFPNFVEED 342 (978)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~-~~~~~~~~~~~~~~~l~C~~~~~~p~~---~i~W~~~~~~~~~~~~ 342 (978)
|+| |+|.|.+..+. .+..+.|.|..+|.+. ..+.+..+.+|+.++|.|.+. +.|++ .|+|+|++.++....
T Consensus 60 -d~g-Y~C~a~~~~~~-~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~-g~~~~~~~~v~W~k~g~~l~~~~- 134 (450)
T 1z7z_I 60 -DSQ-PMCYSNCPDGQ-STAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVE-GGAPRANLTVVLLRGEKELKREP- 134 (450)
T ss_dssp -CBC-CEEEEEETTEE-EEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEE-CCBCGGGEEEEEEETTEEEEEEE-
T ss_pred -CCe-eEEEEeCCCCc-ceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEec-CCCCCcCcEEEEeeCCEEeeccc-
Confidence 999 99999765543 4667888887766654 334556788899999999984 55555 899999987753221
Q ss_pred ceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccc-----cCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcE
Q psy12060 343 KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGR-----NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV 417 (978)
Q Consensus 343 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~-----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~ 417 (978)
......++.|.|.+++.+|+|.|+|.|.|..+..+. .+....|.|...+.. ++.. ..+..+.+|+.+
T Consensus 135 -~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~-----~p~~--~~~~~v~~G~~v 206 (450)
T 1z7z_I 135 -AVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPAT-----PPQL--VSPRVLEVDTQG 206 (450)
T ss_dssp -CCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSS-----CCEE--ECCSEEETTSEE
T ss_pred -ccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCC-----CCEe--cCceeEEeCCcE
Confidence 111122357999999999999999999998764331 122345555433111 1100 012467899999
Q ss_pred EEEEEEeec-C--CCeeEEEEcCccCCCCceeeecccEEEeC---CCCCCCCe--EEEEEEEeCCCceEEEEEEEEEe--
Q psy12060 418 RLECVAFGY-P--VPSYNWTRRGSPLPRNAYFENFNRILTIP---NVKVEDQG--EYICRASNDRSALESSVTISIQA-- 487 (978)
Q Consensus 418 ~l~C~~~g~-p--~~~v~W~~~~~~l~~~~~~~~~~~~L~i~---~~~~~d~G--~Y~C~a~n~~g~~~~~~~l~V~~-- 487 (978)
+|.|.+.|. | .+++.|++++..+... .......+.+. +++.+|+| .|+|.|.|..|.....+.|.|..
T Consensus 207 ~l~C~~~g~~P~~~~~~~W~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~ 284 (450)
T 1z7z_I 207 TVVCSLDGLFPVSEAQVHLALGDQRLNPT--VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP 284 (450)
T ss_dssp EEEEEEESCTTGGGCEEEEEETTEECCCE--EEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred EEEEEeeCCCCCCceEEEEeCCCEeCCce--EEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCC
Confidence 999999988 7 7899999999998763 22222222222 77899999 99999999999988889999987
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a 567 (978)
+|.+.. .+..+.+|++++|.|.+. |.+.++| +|..+... . ....|.|..+.. +|+|.|+|.|
T Consensus 285 ~p~i~~--~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~------~-----~~~~L~i~~~~~-~d~G~Y~C~a 346 (450)
T 1z7z_I 285 APNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL------G-----PRAQLLLKATPE-DNGRSFSCSA 346 (450)
T ss_dssp CCEEEE--SCSEEETTCEEEEEEEC--------------------------C-----CCCCEEEECCGG-GTTCEEEEEE
T ss_pred CCeEec--CCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCC------C-----ceEEEEEecCcc-cCCceEEEEE
Confidence 455543 345789999999999987 8899999 77776311 1 123789999986 9999999999
Q ss_pred EcCCC-c---eeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecCcE
Q psy12060 568 KNQLK-T---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 643 (978)
Q Consensus 568 ~n~~g-~---~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l 643 (978)
.|..+ . ......|.|.. +|.+...+.+....+.+|+.++|.|.+.|.|.|.++|+++|..+... +.+
T Consensus 347 ~n~~~g~~~~~~~~~~l~V~~-~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~--------g~~ 417 (450)
T 1z7z_I 347 TLEVAGQLIHKNQTRELRVLY-GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPI--------GES 417 (450)
T ss_dssp EEEETTEEEEEEEEEECEEEE-EEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCT--------TSC
T ss_pred EcCCCCcccccceeEEEEEec-CCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCC--------CCe
Confidence 97665 3 23556777763 56666554445567889999999999999999999999998744332 222
Q ss_pred EEccccCCCCEEEEEEEEeCCceeeeeEEEEEEe
Q psy12060 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677 (978)
Q Consensus 644 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 677 (978)
. .++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 418 ~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 418 V--TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp E--ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred E--eEehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 2 5788999999999999999999999998864
No 17
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=5.2e-44 Score=411.94 Aligned_cols=454 Identities=16% Similarity=0.246 Sum_probs=295.1
Q ss_pred eCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEccc--cccccccc--ccCCCCCCceEee----cceEEEeCCCC
Q psy12060 194 KQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLVAN--LIDPLSDKRFTLS----GGNLIINDPRQ 265 (978)
Q Consensus 194 ~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~--~~~~~~~~--~~~~~~~~~~~~~----~~~l~i~~~~~ 265 (978)
.+|.+..+. +|++++|.|.+.|.|.+.|.|||++. .+..+... ........|+... ..+|.|.++ +
T Consensus 5 ~~p~~~~v~-----~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v-~ 78 (523)
T 2rcj_C 5 TQPPSASGT-----PGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGL-E 78 (523)
T ss_pred ccCCceEEe-----cCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCC-C
Confidence 345555543 46679999999999999999999852 11110000 0001112344432 237999997 8
Q ss_pred CCCCeEEEEEEEeCceeE--EeEEEEEEEe----eecccccCCCCeeeecccCeEEEeCCCCCCCC-ceEEEeccccccc
Q psy12060 266 VEDRGSYHCKASNKFGSI--ISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNF 338 (978)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~--~s~~~~l~v~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~i~W~~~~~~~~ 338 (978)
.+|+|.|+|.|.|..|.. .+..+.|.|. .+|.+...+.......|+.++|.|.+.+..|+ +.|+|+|||.++.
T Consensus 79 ~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 158 (523)
T 2rcj_C 79 AEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVK 158 (523)
T ss_pred hhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCC
Confidence 999999999999987642 2345667663 23333333333445568889999999644443 4999999998753
Q ss_pred ccccce-EEEeeC------CcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEcc-CCCccccccCCCCCCCCCCC
Q psy12060 339 VEEDKR-VFVSYD------GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP-HSNFQQLKFPNNFPKTFPEA 410 (978)
Q Consensus 339 ~~~~~~-~~~~~~------~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~-~~~~~~~~~~~~~~~~~~~~ 410 (978)
...... .....+ +.|.|.+++.+|+|.|+|.|.|..+.... .+.+.+.. ....+.+.. ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~---~~~~~~~~~~~~~P~v~~-----~~~~~~ 230 (523)
T 2rcj_C 159 AGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK---TVAPTECSASTKGPSVFP-----LAPSSK 230 (523)
T ss_pred CceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccccc---ceeeeecCCCCcCCEEEe-----cCCCcc
Confidence 221100 011122 25999999999999999999998754322 12222111 111111110 011124
Q ss_pred CCCCCcEEEEEEEeec-CCC-eeEEEEcCccCCCCc--eeee------cccEEEeCCCCCCCCeEEEEEEEeCCCceEEE
Q psy12060 411 PKAGDKVRLECVAFGY-PVP-SYNWTRRGSPLPRNA--YFEN------FNRILTIPNVKVEDQGEYICRASNDRSALESS 480 (978)
Q Consensus 411 v~~G~~~~l~C~~~g~-p~~-~v~W~~~~~~l~~~~--~~~~------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 480 (978)
+.+|+.++|.|.+.|. |.| +|+|+|++..+.... .... ....|.|.++..+| |.|+|.|.|..|.....
T Consensus 231 ~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~ 309 (523)
T 2rcj_C 231 STSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 309 (523)
T ss_pred cccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceE
Confidence 5799999999999886 877 899999998764211 1111 12489999999999 99999999999988777
Q ss_pred EEEEEEeeceeec-cCCccc-ccCCCceeEEEEeecCCC----CeeEEeECCEECCCCCCCC--CCCCcEEEecCEEEEE
Q psy12060 481 VTISIQAEPNFTI-PLTDKH-MDNQADLTWTCEAFGVPD----VTYSWFRNGELLNSETLPL--EDQDRYFIQDNVLTIR 552 (978)
Q Consensus 481 ~~l~V~~~p~~~~-~~~~~~-~~~g~~~~l~C~~~~~p~----~~i~W~~~g~~~~~~~~~~--~~~~~~~~~~~~l~i~ 552 (978)
+.|.|...|.+.+ .+.... +.+|+++.|.|.+.|.|+ +.|+|+|+|..+....... ..........+.|.|.
T Consensus 310 ~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~ 389 (523)
T 2rcj_C 310 KRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVL 389 (523)
T ss_pred EecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEEC
Confidence 7887777776543 443343 789999999999998643 5999999999886432100 0111112223468888
Q ss_pred eCCCCCCCeEEEEEEEcCCCceeeEEEEEE---EEcCCccccCCCCcceeecCCCeEEEEEeeccCCCC--eeEEeeCCE
Q psy12060 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRV---LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 627 (978)
Q Consensus 553 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v---~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~g~ 627 (978)
.+.. +|+|.|+|.|.|..+.......+.+ ...+|.+...+.... .+ .|..++|.|.+.|.|++ .++|+++|.
T Consensus 390 ~~~~-~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~-~~-~~~~~~l~C~~~g~~p~~~~v~W~k~g~ 466 (523)
T 2rcj_C 390 HQNW-LDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRE-EM-TKNQVSLTCLVKGFYPSDIAVEWESNGQ 466 (523)
T ss_pred HHHh-cCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCChH-Hc-cCCceEEEEEEEeeECCCCEEEEEECCE
Confidence 8875 8999999999998776655544543 223555544332221 13 34459999999997665 999999999
Q ss_pred EecCCCcEE--EeecCc------EEEccccCCCCEEEEEEEEeCCc
Q psy12060 628 IIGSGGRRK--IFENGN------LLISPVSRDDSGIYSCTATNVHG 665 (978)
Q Consensus 628 ~~~~~~~~~--~~~~~~------l~i~~~~~~d~G~Y~C~a~n~~g 665 (978)
.+....... ...+++ |.+.....+|+|.|+|.|.|...
T Consensus 467 ~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l 512 (523)
T 2rcj_C 467 PENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 512 (523)
T ss_pred ECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCc
Confidence 886433221 233443 45555556789999999999753
No 18
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=408.54 Aligned_cols=450 Identities=16% Similarity=0.231 Sum_probs=302.7
Q ss_pred CCCeeeecccCeEEEeCCCCCCCCceEEEecccc--ccc-c---------cccceEEEeeC---CcEEEeeeeeecceee
Q psy12060 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF--PNF-V---------EEDKRVFVSYD---GALYFSALEQIDAGNY 366 (978)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~--~~~-~---------~~~~~~~~~~~---~~L~i~~~~~~d~G~Y 366 (978)
+....+.+|+.++|.|.+ .+.|.+.|.|+|++. ... + ....|+....+ ++|.|.+++.+|+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (523)
T 2rcj_C 7 PPSASGTPGQRVTISCTG-TSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDY 85 (523)
T ss_pred CCceEEecCCcEEEEEEE-eccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEE
Confidence 445678899999999998 567889999999752 211 0 01234443322 3699999999999999
Q ss_pred EEEEEeecccccccCCceeEEEccCCCc-cccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCC--eeEEEEcCccCCCC
Q psy12060 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNF-QQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRRGSPLPRN 443 (978)
Q Consensus 367 ~C~~~n~~~~~~~~~~~~~l~V~~~~~~-~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~--~v~W~~~~~~l~~~ 443 (978)
+|.|.|..+........+.|.|...+.. +.+...+ ....+.+|+.++|.|.+.|.|++ .|+|+|+|.++...
T Consensus 86 ~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~-----~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 160 (523)
T 2rcj_C 86 YCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFP-----PSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAG 160 (523)
T ss_pred EEEEccCCCccccccCceEEEeccCCCcCCeEEecC-----CcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCc
Confidence 9999997653222223367777532211 1111111 11244689999999999987764 99999999988654
Q ss_pred ceee----ec------ccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEE----EeeceeeccCCcccccCCCceeEE
Q psy12060 444 AYFE----NF------NRILTIPNVKVEDQGEYICRASNDRSALESSVTISI----QAEPNFTIPLTDKHMDNQADLTWT 509 (978)
Q Consensus 444 ~~~~----~~------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V----~~~p~~~~~~~~~~~~~g~~~~l~ 509 (978)
.... .. ...|.|.++..+|+|.|+|.|.|..+.....+.+.+ ..+|.+........+.+|+.++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~ 240 (523)
T 2rcj_C 161 VETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALG 240 (523)
T ss_pred eEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEE
Confidence 3221 11 136999999999999999999999887666655432 345665543333456899999999
Q ss_pred EEeecC-CCC-eeEEeECCEECCCCCCCC-CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcC
Q psy12060 510 CEAFGV-PDV-TYSWFRNGELLNSETLPL-EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLK 586 (978)
Q Consensus 510 C~~~~~-p~~-~i~W~~~g~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 586 (978)
|.+.|. |.+ .|+|+|+|..+....... ............|.|.++.. +| |.|+|.|.|..|.......+.+.. .
T Consensus 241 C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d-G~Y~C~a~n~~g~~~~~~~l~v~~-~ 317 (523)
T 2rcj_C 241 CLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPSNTKVDKRVEPLS-L 317 (523)
T ss_pred EEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhc-CC-ceEEEEEEeCCCCcceEEecCCCc-C
Confidence 999886 766 899999998754211100 00111112234799999986 88 999999999999876666666543 3
Q ss_pred CccccCCCCcceeecCCCeEEEEEeeccCCC----CeeEEeeCCEEecCCCcEE--Eeec------CcEEEccccCCCCE
Q psy12060 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPK----PKFVWKKDGNIIGSGGRRK--IFEN------GNLLISPVSRDDSG 654 (978)
Q Consensus 587 p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~----~~i~W~~~g~~~~~~~~~~--~~~~------~~l~i~~~~~~d~G 654 (978)
|.+...+......+.+|+.+.|.|.+.|.|+ +.|+|+|+|..+....... ...+ +.|.|.++..+|+|
T Consensus 318 P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G 397 (523)
T 2rcj_C 318 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGK 397 (523)
T ss_pred ceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCC
Confidence 4433222212222678999999999998653 4999999999886543221 1122 34889999999999
Q ss_pred EEEEEEEeCCceeeeeEEEE----EEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccc
Q psy12060 655 IYSCTATNVHGMDESKGRLI----VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 730 (978)
Q Consensus 655 ~Y~C~a~n~~g~~~~~~~l~----v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~ 730 (978)
.|+|.|.|..+.......+. +..+|.+....+....+..+ .++|.|.+.+.+++.+.+.|+++|.++......
T Consensus 398 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~~~-~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~-- 474 (523)
T 2rcj_C 398 EYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKN-QVSLTCLVKGFYPSDIAVEWESNGQPENNYKTT-- 474 (523)
T ss_pred eEEEEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCChHHccCC-ceEEEEEEEeeECCCCEEEEEECCEECCCeeec--
Confidence 99999999887765555554 23455544433333333344 499999999988887889999999988642110
Q ss_pred cCCeeecCC-----ceEEEeccCCCCCEEEEEEEEcCCC
Q psy12060 731 ETPNINIDG-----GLLEITNASFADAGEYECVVKSTVG 764 (978)
Q Consensus 731 ~~~~~~~~~-----~~l~i~~~~~~d~g~Y~c~a~n~~G 764 (978)
......++ ..|.|......|+|.|+|.|.|..-
T Consensus 475 -~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l 512 (523)
T 2rcj_C 475 -PPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 512 (523)
T ss_pred -cceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCc
Confidence 01111111 2344555555789999999999754
No 19
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=1.6e-42 Score=406.03 Aligned_cols=452 Identities=18% Similarity=0.256 Sum_probs=322.1
Q ss_pred CCeeeecccCeEEEeCCCCCCCC---ceEEEeccccccc------------ccccceEEEee---CC--cEEEeeeeeec
Q psy12060 303 APEIGNQNWGKAMFCDPPTNYPG---VNYYWARDYFPNF------------VEEDKRVFVSY---DG--ALYFSALEQID 362 (978)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~~p~---~~i~W~~~~~~~~------------~~~~~~~~~~~---~~--~L~i~~~~~~d 362 (978)
....+.+|+.++|.|.+. +.|. ..|.|+|++.... .....|+.+.. ++ +|.|.+++.+|
T Consensus 8 ~~v~v~~G~~v~L~C~~~-~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D 86 (585)
T 2ocw_A 8 EEVNSVEGNSVSITCYYP-PTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDD 86 (585)
T ss_pred ceeEEecCCcEEEEEeCC-CCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCccc
Confidence 345678899999999984 4443 4899999986421 01123555443 23 59999999999
Q ss_pred ceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeec-CCCeeEEEEcCccCC
Q psy12060 363 AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY-PVPSYNWTRRGSPLP 441 (978)
Q Consensus 363 ~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~l~ 441 (978)
+|.|+|.|.|..+.. +..+.|.|..+|.+.. ......+.+|+.++|.|.+.+. |.+.+.|+|++..+.
T Consensus 87 ~G~Y~C~~~n~~~~~---~~~~~l~V~~~p~~~~--------~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~ 155 (585)
T 2ocw_A 87 SGRYKCGLGINSRGL---SFDVSLEVSQGPGLLN--------DTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYP 155 (585)
T ss_pred CEEEEEEcccCCCCc---eEEEEEEEecCccccC--------CCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCc
Confidence 999999999876543 3347888887764321 1123457899999999999864 456899999986532
Q ss_pred C-------------Cc--eeeecc-----cEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCccccc
Q psy12060 442 R-------------NA--YFENFN-----RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMD 501 (978)
Q Consensus 442 ~-------------~~--~~~~~~-----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~ 501 (978)
. .. .+...+ .+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+| +....+.
T Consensus 156 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~-----p~~~~~~ 230 (585)
T 2ocw_A 156 VLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE-----PELVYED 230 (585)
T ss_pred eEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC-----CceeEEc
Confidence 1 11 111112 279999999999999999999999988888999988643 3334578
Q ss_pred CCCceeEEEEeecCCC---CeeEEe-ECCEECC---C-C-CCCCCCCCcEEEe----cC--EEEEEeCCCCCCCeEEEEE
Q psy12060 502 NQADLTWTCEAFGVPD---VTYSWF-RNGELLN---S-E-TLPLEDQDRYFIQ----DN--VLTIRYLNPERDPAMYQCR 566 (978)
Q Consensus 502 ~g~~~~l~C~~~~~p~---~~i~W~-~~g~~~~---~-~-~~~~~~~~~~~~~----~~--~l~i~~~~~~~d~G~Y~C~ 566 (978)
+|+.++|.|.+ +.+. +.+.|+ ++|.... . . ........++.+. .+ .|.|.++.. +|+|.|+|.
T Consensus 231 ~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~-~d~G~Y~C~ 308 (585)
T 2ocw_A 231 LRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRK-EDAGRYLCG 308 (585)
T ss_pred CCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCCh-hhCEEEEEE
Confidence 99999999997 4443 789997 8874211 1 0 0001123344333 33 799999996 999999999
Q ss_pred EEcCCCcee----eEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCee----EEee--CCE--EecC---
Q psy12060 567 AKNQLKTRY----SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF----VWKK--DGN--IIGS--- 631 (978)
Q Consensus 567 a~n~~g~~~----~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i----~W~~--~g~--~~~~--- 631 (978)
|.|..+... ....|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+.+ .|++ +|. .+..
T Consensus 309 a~n~g~~~~~~~~~~~~l~V~~-~p~~~~~~--~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~ 385 (585)
T 2ocw_A 309 AHSDGQLQEGSPIQAWQLFVNE-ESTIPRSP--TVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEG 385 (585)
T ss_pred EEcCCCccccCceeeEEEEEec-ccccccCC--cceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecc
Confidence 999533321 566777764 55554433 4556789999999999999999876 7999 886 4432
Q ss_pred ------CCcEEEe---ecCc--EEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEE
Q psy12060 632 ------GGRRKIF---ENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 700 (978)
Q Consensus 632 ------~~~~~~~---~~~~--l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~ 700 (978)
..++.+. .+++ |.|.+++.+|+|.|+|.| |..|.....+.|.|...|+.+.. +....+..|+.+.|.
T Consensus 386 ~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~-~~~~~v~~G~~v~L~ 463 (585)
T 2ocw_A 386 WVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKV-PGNVTAVLGETLKVP 463 (585)
T ss_pred eeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCcccccc-CCceeEecCCcEEEE
Confidence 2344443 2344 999999999999999999 99998888899999876554443 567789999999999
Q ss_pred EEeeecC--CcCeEEEEeeCCEEccccccccccCCeeecC----CceEEEeccCCCCCEEEEEEEEcCCCceee-eEEEE
Q psy12060 701 CSAHTEE--LLDVAYIWTHNGVRIGNMDLNELETPNINID----GGLLEITNASFADAGEYECVVKSTVGKIST-KTTVI 773 (978)
Q Consensus 701 C~~~~~p--~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~-~~~l~ 773 (978)
|.+.+.+ .|...+.|+++|..+................ ...|.|.++..+|+|.|+|.|.|..|.... .+.|.
T Consensus 464 C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~ 543 (585)
T 2ocw_A 464 CHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVA 543 (585)
T ss_pred EEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEE
Confidence 9997432 2445679999998775422110000011111 248999999999999999999999996654 48999
Q ss_pred EcCCC
Q psy12060 774 VEGPP 778 (978)
Q Consensus 774 v~~~P 778 (978)
|..+|
T Consensus 544 V~~~p 548 (585)
T 2ocw_A 544 VEERK 548 (585)
T ss_pred EEeee
Confidence 98887
No 20
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=8.6e-43 Score=386.12 Aligned_cols=357 Identities=23% Similarity=0.368 Sum_probs=288.7
Q ss_pred eeecCCCeEEEEEeeccCCCCeeEEeeC--CEEecC-----CCcEEEee---cCcEEEccccCCCCEEEEEEEEeCCcee
Q psy12060 598 TYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIGS-----GGRRKIFE---NGNLLISPVSRDDSGIYSCTATNVHGMD 667 (978)
Q Consensus 598 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~--g~~~~~-----~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 667 (978)
..+.+|++++|.|.+.|.|.+.|+|+|+ |..+.. +.++.+.. .+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 10 ~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 89 (389)
T 2jll_A 10 ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGH 89 (389)
T ss_dssp EEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred eEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCc
Confidence 4467899999999999999999999999 888765 35555543 3469999999999999999999999999
Q ss_pred eeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeee--cCCceEEEe
Q psy12060 668 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN--IDGGLLEIT 745 (978)
Q Consensus 668 ~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~--~~~~~l~i~ 745 (978)
...+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|+++|..+...... ...+. .....|.|.
T Consensus 90 ~~~~~l~V~~~P~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~--~i~W~~~g~~l~~~~~~---~~~~~~~~~~~~L~i~ 163 (389)
T 2jll_A 90 QKSMYLDIEYAPKFIS-NQTIYYSWEGNPINISCDVKSNPPA--SIHWRRDKLVLPAKNTT---NLKTYSTGRKMILEIA 163 (389)
T ss_dssp EEEEEEEEEEEEEECC-SCCEEEECTTCCEEEEECEEEESCC--EEEEEETTEESSCTTCT---TEEEEECSSCEEEEEC
T ss_pred ceEEEEEEEeCCEEec-CcceEEeccCCEEEEEEEEEecCCC--eEEEEECCccCCcccCc---eEEEeccCCEEEEEEC
Confidence 9999999998887653 3334467899999999999999865 56999999988653210 11111 123579999
Q ss_pred ccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCCCceEEEEeeCCeeEEEeecCCC-CCCCceeEEEEEeeccccCce
Q psy12060 746 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT-NGRPITHYKIIARTNWNSTWF 824 (978)
Q Consensus 746 ~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~-~~~~i~~Y~v~~~~~~~~~w~ 824 (978)
++...|+|.|+|.|.|..|..+..+.+.+..+|.+|.++.+.....+++.|+|.+|.. +|.++.+|.|+|+..+...|.
T Consensus 164 ~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~ 243 (389)
T 2jll_A 164 PTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWK 243 (389)
T ss_dssp CCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCE
T ss_pred CCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccE
Confidence 9999999999999999999999999999999999999999989999999999998764 456899999999998888886
Q ss_pred EecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEE
Q psy12060 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 904 (978)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v 904 (978)
..... .....+++.+ |.+++.|.|+|.|.|..|.|.+|... .+.|.+..|+.+|. +.....+.++|.|
T Consensus 244 ~~~~~---------~~~~~~~i~~-l~~~~~y~~~v~A~N~~G~~~~s~~~-~~~t~~~~~p~~p~-~~~~~~~~~~v~l 311 (389)
T 2jll_A 244 IVRSH---------GVQTMVVLNN-LEPNTTYEIRVAAVNGKGQGDYSKIE-IFQTLPVREPSPPS-IHGQPSSGKSFKL 311 (389)
T ss_dssp EEECS---------TTCSEEEECS-CCTTCEEEEEEEEEESSCBCCCCCCE-EEECCCCCCCCCCC-EEEEEETTTEEEE
T ss_pred Eeecc---------CCcceEEECC-ccCCCEEEEEEEEEcCCccCCCCcce-EEEecCCCCCCCCc-cccccCcCCEEEE
Confidence 54321 2346688999 99999999999999999999998876 67777776778884 6666678899999
Q ss_pred EEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 905 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 905 ~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
+|++ +.++|++|++|+|+|+..+..+|..... ...+. ..+.|.+|.|++.|.|+|+|+|.+|.|++|+
T Consensus 312 ~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~--~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~ 379 (389)
T 2jll_A 312 SITK--QDDGGAPILEYIVKYRSKDKEDQWLEKK-VQGNK--DHIILEHLQWTMGYEVQITAANRLGYSEPTV 379 (389)
T ss_dssp EECC--CCCCSSCCCEEEEEEEC-----CCBCCE-ECTTC--CEEEECSCCTTCEEEEEEEEEC-CCBCCCEE
T ss_pred EEEC--CCCCCCcccEEEEEEEeCCCCcceeEee-ccCCc--ceEEeCCcCCCCEEEEEEEEEcCCcCCCcee
Confidence 9998 5688999999999999877767764322 11222 3467899999999999999999999999985
No 21
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=6.1e-43 Score=387.13 Aligned_cols=365 Identities=24% Similarity=0.388 Sum_probs=287.0
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEE-cccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
+|.|+.+|.+.+.. .+|+.++|.|.+.|.|.|+|+|+| ||.++.. ....+....+++|.|.++ +.+
T Consensus 3 ~P~f~~~p~~~~~~----~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~--------~~~~~~~~~~~~L~i~~~-~~~ 69 (388)
T 2v5m_A 3 GPVFLKEPTNRIDF----SNSTGAEIECKASGNPMPEIIWIRSDGTAVGD--------VPGLRQISSDGKLVFPPF-RAE 69 (388)
T ss_dssp EEEEEECCCSEEEE----ETTTCEEEECEEEEESCCEEEEEETTSCBCCC--------BTTTBEECSTTEEEECCC-CGG
T ss_pred CCchhhCCCceEEE----EcCccEEEEEECCCCCCCEEEEEcCCCCcccc--------CCCceEEcCCceEEeccc-Chh
Confidence 58899999886532 346679999999999999999999 6655421 122334456789999987 777
Q ss_pred C------CeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCC--CceEEEecccccccc
Q psy12060 268 D------RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYFPNFV 339 (978)
Q Consensus 268 d------~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p--~~~i~W~~~~~~~~~ 339 (978)
| +|.|+|.|.|..|...+..+.|.+..++.+........+.+|+.++|.|.+....+ .+.|.|+|++..+..
T Consensus 70 d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~ 149 (388)
T 2v5m_A 70 DYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYF 149 (388)
T ss_dssp GCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEEC
T ss_pred hccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccc
Confidence 6 99999999999998778888888888887776667778889999999999854433 378999999876532
Q ss_pred c---ccceEEEeeCCcEEEeeeeeecc-eeeEEEEEeecccccc-cCCceeEEEccCCCccccccCCCCCCCCCCCCCCC
Q psy12060 340 E---EDKRVFVSYDGALYFSALEQIDA-GNYSCNVQSKVSDTGR-NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG 414 (978)
Q Consensus 340 ~---~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~~~n~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G 414 (978)
. ...+..+..+++|.|.+++.+|+ |.|+|.+.|..+.... ......|.|..+........+... ..+..+.+|
T Consensus 150 ~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~--~~~~~v~~G 227 (388)
T 2v5m_A 150 PGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALV--QKPLELMVA 227 (388)
T ss_dssp SSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSC--CCCEEEETT
T ss_pred cccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCcccc--CCceEEeeC
Confidence 2 24566777788999999999999 9999999997643322 223346666654321111111111 112456789
Q ss_pred CcEEEEEEEeecCCCeeEEEEcCccCC------CCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEee
Q psy12060 415 DKVRLECVAFGYPVPSYNWTRRGSPLP------RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488 (978)
Q Consensus 415 ~~~~l~C~~~g~p~~~v~W~~~~~~l~------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 488 (978)
+.++|.|.+.|.|.|.|+|+|++..+. ...+....++.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 228 ~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 307 (388)
T 2v5m_A 228 HTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP 307 (388)
T ss_dssp SCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE
T ss_pred CcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCC
Confidence 999999999999999999999865442 22233445678999999999999999999999999999999999999
Q ss_pred ceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEE
Q psy12060 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 568 (978)
Q Consensus 489 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~ 568 (978)
|.+...+....+.+|++++|.|.+.|.|.+.|.|+|+|..+.. ..+.|.|.++.. +|+|.|+|.|.
T Consensus 308 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~-------------~~~~L~i~~v~~-~d~G~Y~C~a~ 373 (388)
T 2v5m_A 308 LSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH-------------SESVLRIESVKK-EDKGMYQCFVR 373 (388)
T ss_dssp EEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSC-------------CSSEEEESSCCG-GGCEEEEEEEE
T ss_pred CccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECcc-------------CCCEEEEecCCh-hhCEEEEEEEE
Confidence 9888877778899999999999999999999999999998863 135799999986 99999999999
Q ss_pred cCCCceeeEEEEEE
Q psy12060 569 NQLKTRYSSAQLRV 582 (978)
Q Consensus 569 n~~g~~~~~~~l~v 582 (978)
|..|....++.|.|
T Consensus 374 N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 374 NDRESAEASAELKL 387 (388)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEe
Confidence 99999888887765
No 22
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=7.7e-43 Score=388.93 Aligned_cols=377 Identities=28% Similarity=0.491 Sum_probs=296.0
Q ss_pred CCCeeEeC-CCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEe----C
Q psy12060 188 RGPYFIKQ-PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIIN----D 262 (978)
Q Consensus 188 ~~P~~~~~-p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~----~ 262 (978)
.+|.|... +.+..+. +|+.++|.|.+.|.|.++|.|+|+|..+..... ........+++|.|. +
T Consensus 15 ~~P~i~~~~~~~~~v~-----~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~------~~~~~~~~~~~l~i~~~~~~ 83 (404)
T 3p3y_A 15 QPPTITKQSAKDHIVD-----PRDNILIECEAKGNPAPSFHWTRNSRFFNIAKD------PRVSMRRRSGTLVIDFRSGG 83 (404)
T ss_dssp CCCCEEEECCTTCEEC-----SSSCCCCCEEECCSSCCEEEEEETTEECCGGGC------SSCBCCSSSCCCBCCCTTTC
T ss_pred CCCcccccCCccEEEc-----CCCCEEEEEEecCCCCCeEEEEECCEEeeeecC------CcceEecCCceEEEEeccCC
Confidence 45777754 5555543 466799999999999999999999976532111 111222245666664 5
Q ss_pred CCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccccC-CCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccc
Q psy12060 263 PRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLK-RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (978)
Q Consensus 263 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~-~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~ 341 (978)
+ +.+|+|.|+|.|.|..|...+..+.|.|...+.+... ..+..+.+|+.++|.|.+..+.|.+.+.|++++... ...
T Consensus 84 ~-~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~-~~~ 161 (404)
T 3p3y_A 84 R-PEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEP-ITQ 161 (404)
T ss_dssp C-TTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCB-CCC
T ss_pred C-CccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccc-cCC
Confidence 4 7899999999999999998788889988877655433 345678899999999999788899999999997553 334
Q ss_pred cceEEEeeCCcEEEeeeeeec-ceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCC----CCCCCCCCCc
Q psy12060 342 DKRVFVSYDGALYFSALEQID-AGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKT----FPEAPKAGDK 416 (978)
Q Consensus 342 ~~~~~~~~~~~L~i~~~~~~d-~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~----~~~~v~~G~~ 416 (978)
..+.....++.|.|.++..+| +|.|+|.|.|..+........+.|.|...+.... .++.+... ....+.+|+.
T Consensus 162 ~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~--~~p~~~~~~~~~~~~~~~~G~~ 239 (404)
T 3p3y_A 162 DKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAE--RTPSFMYPQGTASSQMVLRGMD 239 (404)
T ss_dssp CSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCC--CCCCBSSSCSSEEEEEEETTSC
T ss_pred CCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccc--cCCccccccCCCCCceEecCCC
Confidence 566777778899999999999 5999999999877655555557777765432211 11111110 1234679999
Q ss_pred EEEEEEEeecCCCeeEEEEcCccCCCCc-eeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccC
Q psy12060 417 VRLECVAFGYPVPSYNWTRRGSPLPRNA-YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPL 495 (978)
Q Consensus 417 ~~l~C~~~g~p~~~v~W~~~~~~l~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 495 (978)
++|.|.+.|.|.+.++|+|++..+.... .....+..|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.+...+
T Consensus 240 v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 319 (404)
T 3p3y_A 240 LLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP 319 (404)
T ss_dssp EEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECC
T ss_pred EEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccC
Confidence 9999999999999999999999987654 344556899999999999999999999999999999999999999998888
Q ss_pred CcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCcee
Q psy12060 496 TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 575 (978)
Q Consensus 496 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 575 (978)
....+.+|+.++|.|.+.|.|.+.+.|+++|..+.... ........++.|.|.++.. +|+|.|+|.|.|..|...
T Consensus 320 ~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~----~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~ 394 (404)
T 3p3y_A 320 KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAP----PNPNREVAGDTIIFRDTQI-SSRAVYQCNTSNEHGYLL 394 (404)
T ss_dssp CCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSC----CCTTEEEETTEEEESSCCS-SCCCEEEEEEEETTEEEE
T ss_pred CcceeecCCcEEEEEEccccCCCceEEEECCEecCCCC----CCceEEecCCEEEEeecCH-HHCEEEEEEEEeCCCcEE
Confidence 88889999999999999999999999999999986432 2234555677999999997 999999999999999998
Q ss_pred eEEEEEEEE
Q psy12060 576 SSAQLRVLT 584 (978)
Q Consensus 576 ~~~~l~v~~ 584 (978)
.++.|.|.+
T Consensus 395 ~~~~l~V~d 403 (404)
T 3p3y_A 395 ANAFVSVLD 403 (404)
T ss_dssp EEEEEEEC-
T ss_pred EEEEEEEEe
Confidence 888887753
No 23
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=5.4e-43 Score=388.74 Aligned_cols=373 Identities=21% Similarity=0.352 Sum_probs=282.9
Q ss_pred CCCCeeEeCCCceEecCCCccccCcEEEEEEeec-CCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCC
Q psy12060 187 PRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGG-YPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQ 265 (978)
Q Consensus 187 ~~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 265 (978)
..+|.|...|.+..+.+ |+.++|.|.+.| .|.+.++|+|+|.++.... ........+++|.|.++ +
T Consensus 4 ~~~P~~~~~p~~~~v~~-----G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~-------~~~~~~~~~~~L~i~~~-~ 70 (395)
T 1bih_A 4 DKYPVLKDQPAEVLFRE-----NNPTVLECIIEGNDQGVKYSWKKDGKSYNWQE-------HNAALRKDEGSLVFLRP-Q 70 (395)
T ss_dssp -CCCEECCCCSEEEEET-----TSCEEECCCEESCCSSCEEEEEESSSBCCTTT-------TTEEECTTSCCEEESSC-C
T ss_pred CCCCEeecCCCceEEeC-----CCEEEEEEEEecCCCCceEEEEECCcCccccc-------ceEEEecCCceEEEecC-C
Confidence 35689999998887654 566999999998 8999999999997653211 01112234678999998 8
Q ss_pred CCCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEeccccccc--ccc--
Q psy12060 266 VEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNF--VEE-- 341 (978)
Q Consensus 266 ~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~--~~~-- 341 (978)
.+|+|.|+|.|.|..|...+..+.|.+.+.+.+...+....+.+|+.++|.|.+..+.|.+.|.|+|++.... ...
T Consensus 71 ~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 150 (395)
T 1bih_A 71 ASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTD 150 (395)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCC
T ss_pred CCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCccccccc
Confidence 9999999999999999877777788777665544433445566888999999986788999999999872111 111
Q ss_pred -cceEEEeeCCcEEEeeeeeecce---eeEEEEEeecccccccCCceeEEEccCCCcc-ccccCCCCCCCCCCCCCCCCc
Q psy12060 342 -DKRVFVSYDGALYFSALEQIDAG---NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQ-QLKFPNNFPKTFPEAPKAGDK 416 (978)
Q Consensus 342 -~~~~~~~~~~~L~i~~~~~~d~G---~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~-~~~~~~~~~~~~~~~v~~G~~ 416 (978)
..++....+++|.|.+++.+|+| .|+|.|.|..+..........+.+...+... ....++.+ ......+.+|+.
T Consensus 151 ~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~G~~ 229 (395)
T 1bih_A 151 FDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY-VSKDMMAKAGDV 229 (395)
T ss_dssp CCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE-ECCSEEEETTSC
T ss_pred ccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee-cCCceEEECCCc
Confidence 45667777889999999999999 9999999987643222111111111111000 00000000 011245679999
Q ss_pred EEEEEEEeecCCCeeEEEEcCccCCCCc--eee----ecccEEEeCCCCCCCCeEEEEEEEeCCCceEE-EEEEEEEeec
Q psy12060 417 VRLECVAFGYPVPSYNWTRRGSPLPRNA--YFE----NFNRILTIPNVKVEDQGEYICRASNDRSALES-SVTISIQAEP 489 (978)
Q Consensus 417 ~~l~C~~~g~p~~~v~W~~~~~~l~~~~--~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p 489 (978)
++|.|.+.|.|.+.|+|+|++..+.... +.. ..+..|.|.+++.+|+|.|+|.|.|..|.... .+.|.|..+|
T Consensus 230 v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P 309 (395)
T 1bih_A 230 TMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAP 309 (395)
T ss_dssp EEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEE
T ss_pred EEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCC
Confidence 9999999999999999999999886532 121 12348999999999999999999999988665 8999999999
Q ss_pred eeeccCCc-ccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEE
Q psy12060 490 NFTIPLTD-KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 568 (978)
Q Consensus 490 ~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~ 568 (978)
.+...+.. ..+.+|++++|.|.+.|.|.+.+.|+|+|..+.. .++.+..+.|.|.++.. +|+|.|+|.|.
T Consensus 310 ~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~--------~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~ 380 (395)
T 1bih_A 310 KYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSG--------GRATVTDSGLVIKGVKN-GDKGYYGCRAT 380 (395)
T ss_dssp EEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCS--------SSEEEETTEEEESSCCS-TTCEEEEEEEE
T ss_pred ccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCC--------CceEEECCEEEEeeCCc-ccCEEEEEEEE
Confidence 99887766 6789999999999999999999999999998862 25666778999999997 99999999999
Q ss_pred cCCCceeeEEEEEE
Q psy12060 569 NQLKTRYSSAQLRV 582 (978)
Q Consensus 569 n~~g~~~~~~~l~v 582 (978)
|..|....++.|.|
T Consensus 381 N~~G~~~~~~~l~V 394 (395)
T 1bih_A 381 NEHGDKYFETLVQV 394 (395)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred ccCCCceEEEEEEE
Confidence 99999888877766
No 24
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=3.8e-43 Score=396.75 Aligned_cols=410 Identities=17% Similarity=0.217 Sum_probs=292.4
Q ss_pred CCCeeeecccCeEEEeCCCCCCCCceE-----EEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeeccc
Q psy12060 302 RAPEIGNQNWGKAMFCDPPTNYPGVNY-----YWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (978)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p~~~i-----~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 376 (978)
+....+..|+.++|.|.+ .+ |.+.+ .|+|++..+. . .+. ..|.|.+++. |+| |+|.|.+..+.
T Consensus 6 P~~~~v~~G~~v~L~C~~-~g-p~p~~~~~~~~w~k~~~~~~--~-~~~-----~~l~i~~v~~-d~g-Y~C~a~~~~~~ 73 (450)
T 1z7z_I 6 PSKVILPRGGSVLVTCST-SC-DQPMLLGIETPLPKKELLLP--G-NNR-----KVYELSNVQE-DSQ-PMCYSNCPDGQ 73 (450)
T ss_dssp SSEEEEETTEEEEEEEEC-CS-SCCCEEEECSSSCEEECCSS--T-TTE-----EEEEEEEECS-CBC-CEEEEEETTEE
T ss_pred CCceEEecCCcEEEEEEc-cC-CCcccccccceeeecceEec--C-CCc-----eEEEEEeccc-CCe-eEEEEeCCCCc
Confidence 345667889999999999 45 78888 9999976432 1 111 2689999987 999 99999755432
Q ss_pred ccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCC---eeEEEEcCccCCCCcee-eecccE
Q psy12060 377 TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP---SYNWTRRGSPLPRNAYF-ENFNRI 452 (978)
Q Consensus 377 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~---~v~W~~~~~~l~~~~~~-~~~~~~ 452 (978)
.+..+.|.|..+|...... + .+..+.+|++++|.|.+.|.|++ .|+|+|++..+...... ...+..
T Consensus 74 ---~~~~~~l~V~~~P~~~~~~-~------~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~ 143 (450)
T 1z7z_I 74 ---STAKTFLTVYWTPERVELA-P------LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVT 143 (450)
T ss_dssp ---EEEECEEEEEBCCSEEEEC-C------CCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEE
T ss_pred ---ceeEEEEEEEeCCCcceec-C------CCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceE
Confidence 2334678887766543221 1 12457799999999999998887 99999999988543321 222468
Q ss_pred EEeCCCCCCCCeEEEEEEEeCCCceE--------EEEEEEEEee----ceeeccCCcccccCCCceeEEEEeecC-C--C
Q psy12060 453 LTIPNVKVEDQGEYICRASNDRSALE--------SSVTISIQAE----PNFTIPLTDKHMDNQADLTWTCEAFGV-P--D 517 (978)
Q Consensus 453 L~i~~~~~~d~G~Y~C~a~n~~g~~~--------~~~~l~V~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~~-p--~ 517 (978)
|.|.++..+|+|.|+|.|.|..|... ....|.|... |.+.. +..+.+|+.++|.|.+.|. | .
T Consensus 144 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~---~~~v~~G~~v~l~C~~~g~~P~~~ 220 (450)
T 1z7z_I 144 TTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSE 220 (450)
T ss_dssp EEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC---CSEEETTSEEEEEEEEESCTTGGG
T ss_pred EEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecC---ceeEEeCCcEEEEEEeeCCCCCCc
Confidence 99999999999999999999876422 2344555433 22222 1568899999999999988 7 7
Q ss_pred CeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEE---eCCCCCCCe--EEEEEEEcCCCceeeEEEEEEEEcCC-cccc
Q psy12060 518 VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR---YLNPERDPA--MYQCRAKNQLKTRYSSAQLRVLTLKP-SFKK 591 (978)
Q Consensus 518 ~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~---~~~~~~d~G--~Y~C~a~n~~g~~~~~~~l~v~~~~p-~~~~ 591 (978)
+.+.|+++|..+.. +.......+.+. ++.. +|+| .|+|.|.|..|.......|.|...++ .+..
T Consensus 221 ~~~~W~~~~~~~~~---------~~~~~~~~~~~~~~~~v~~-~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~ 290 (450)
T 1z7z_I 221 AQVHLALGDQRLNP---------TVTYGNDSFSAKASVSVTA-EDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVIL 290 (450)
T ss_dssp CEEEEEETTEECCC---------EEEEETTEEEEEEEEECCG-GGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEE
T ss_pred eEEEEeCCCEeCCc---------eEEecCCceeEEEEEEeEh-hhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEec
Confidence 99999999998863 222333333332 5565 8999 99999999999888888888876433 3322
Q ss_pred CCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCc----ee
Q psy12060 592 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG----MD 667 (978)
Q Consensus 592 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g----~~ 667 (978)
. ...+.+|+.++|.|.+. |.|.++| +|..+.... ....|.|..+..+|+|.|+|.|.|..+ ..
T Consensus 291 ~----~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~ 357 (450)
T 1z7z_I 291 T----KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG-----PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHK 357 (450)
T ss_dssp S----CSEEETTCEEEEEEEC--------------------C-----CCCCEEEECCGGGTTCEEEEEEEEEETTEEEEE
T ss_pred C----CeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCCC-----ceEEEEEecCcccCCceEEEEEEcCCCCccccc
Confidence 1 23588999999999998 8889999 777662211 234799999999999999999997665 33
Q ss_pred eeeEEEEEEeCCceeeeC-CCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEec
Q psy12060 668 ESKGRLIVLHGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 746 (978)
Q Consensus 668 ~~~~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~ 746 (978)
...+.|.|..+|.+.... +....+..|+.+.|.|.+.|.|.|. +.|+++|..+.. .+..+ .
T Consensus 358 ~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~--i~W~~~g~~~~~-------------~g~~~---~ 419 (450)
T 1z7z_I 358 NQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPE--LKCLKDGTFPLP-------------IGESV---T 419 (450)
T ss_dssp EEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCE--EEEEETTTEECC-------------TTSCE---E
T ss_pred ceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCc--EEEEECCcccCC-------------CCCeE---e
Confidence 466788888888765543 3567889999999999999999875 589999874322 12233 5
Q ss_pred cCCCCCEEEEEEEEcCCCceeeeEEEEEcCC
Q psy12060 747 ASFADAGEYECVVKSTVGKISTKTTVIVEGP 777 (978)
Q Consensus 747 ~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~ 777 (978)
+..+|+|.|+|.|.|..|..+..+.|.|..|
T Consensus 420 v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 420 VTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 7789999999999999999999999998764
No 25
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=381.20 Aligned_cols=351 Identities=14% Similarity=0.147 Sum_probs=242.6
Q ss_pred CCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeec---ccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEE
Q psy12060 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF---NRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484 (978)
Q Consensus 408 ~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 484 (978)
+..|.+|+++.|.|.+.|.|.+.|.|++++..+......... ...|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 57 ~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 136 (423)
T 3qs7_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVS 136 (423)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEE
T ss_pred cEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEE
Confidence 457889999999999999999999999999887654333211 24699999999999999999999999988899999
Q ss_pred EEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEE
Q psy12060 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564 (978)
Q Consensus 485 V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~ 564 (978)
|..+|.+.. ..+..+..|+.+.|.|.+.|.|.|.|+|+|++..+..... ............+ . ..|+|.|+
T Consensus 137 V~~~p~~~~-~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~--~~~~~~~~~~~~l-----~-~~d~G~Y~ 207 (423)
T 3qs7_E 137 IRNTLLYTL-RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKE--ESPAVVKKEEKVL-----H-ELFGTDIR 207 (423)
T ss_dssp EC-----CE-EEEEEEECSSSSCEEEEEEESSCCEEEEEEC---------------CEEECCSEE-----C-CCCSSCEE
T ss_pred EecCccccc-cCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccc--cccccccccceEE-----e-cccCeEEE
Confidence 987765532 2223456688899999999999999999998875532100 0011111111122 3 48999999
Q ss_pred EEEEcCCCceeeE-EEEEEEEcCCccccCCCCcceeecCCCeEEEEEeecc-CCCCeeEEeeCCEEecCCCcE-------
Q psy12060 565 CRAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRR------- 635 (978)
Q Consensus 565 C~a~n~~g~~~~~-~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~g~~~~~~~~~------- 635 (978)
|.|.|..|..... ..|.|. .+|.+. .....+.+|+.+.|.|.+.| .|.|.|+|+++|..+......
T Consensus 208 C~A~N~~G~~~~~~~~l~V~-~~p~~~----~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~ 282 (423)
T 3qs7_E 208 CCARNELGRECTRLFTIDLN-QTPQTT----LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYST 282 (423)
T ss_dssp EEEECSSCEEEEECEEEESS-SCCCSS----TTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEET
T ss_pred EEEEcCCCCcceeeEEEEEe-cCCccC----CCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccC
Confidence 9999999876542 344443 233331 13556889999999999999 677899999999887554222
Q ss_pred --EEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeC-CCceEEEccccEEEEEEeeecCCcCeE
Q psy12060 636 --KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLDVA 712 (978)
Q Consensus 636 --~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~~~ 712 (978)
.....++|.|.++..+|+|.|+|.|.|. ....+.|.|..+|.+.... ...+.+..|+.+.|.|.+.+.|.| .
T Consensus 283 ~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p--~ 357 (423)
T 3qs7_E 283 NRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQI--R 357 (423)
T ss_dssp TTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCC--E
T ss_pred CceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCC--e
Confidence 1223346999999999999999999998 6677888888877654322 234567789999999999999886 5
Q ss_pred EEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCCCce
Q psy12060 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 784 (978)
Q Consensus 713 ~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~~ 784 (978)
+.|+|+|..+..... ...+...+.+.....+|+|.|+|.|.|..|..+.++.|.|.++|++|.+.
T Consensus 358 i~W~k~g~~l~~~~~-------~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~~~ 422 (423)
T 3qs7_E 358 CTWTFSRKSFPCEQK-------GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHHHH 422 (423)
T ss_dssp EEEEETTEEEECBCC-------BCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----------
T ss_pred EEEEECCEECCCccc-------cccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcccccC
Confidence 699999998865210 01112233336677799999999999999999999999999999988654
No 26
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=9.1e-41 Score=371.92 Aligned_cols=371 Identities=25% Similarity=0.382 Sum_probs=291.0
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeec-CCCCeEEEEEcccccccccccccCCCCCCce-EeecceEEEeCCC-
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGG-YPNPSYEWFKEDYVQDRLVANLIDPLSDKRF-TLSGGNLIINDPR- 264 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~- 264 (978)
....|..+|.+..+.+ |+.++|.|.+.+ .|.+.|.|+|+|..+.. ....+. ...+++|.|.++.
T Consensus 20 ~~~~~~~~P~~~~v~~-----G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~--------~~~~~~~~~~~~~l~i~~~~~ 86 (403)
T 3laf_A 20 RSLHFVSEPSDAVTMR-----GGNVLLNCSAESDRGVPVIKWKKDGLILAL--------GMDDRKQQLPNGSLLIQNILH 86 (403)
T ss_dssp CSSEEEECCCCEEECT-----TCCEEECCEEECTTCCCEEEEEETTEECCT--------TSCTTEEECTTSCEEECSCCC
T ss_pred eeEEEEeCCCceEEec-----CCcEEEEEEcCCCCCCceEEEEECCEECcc--------CCcccEEEecCCcEEEeeeec
Confidence 3467888999988765 556999999986 68889999999976531 112232 3356778887641
Q ss_pred ---CCCCCeEEEEEEEeC-ceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccc-
Q psy12060 265 ---QVEDRGSYHCKASNK-FGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV- 339 (978)
Q Consensus 265 ---~~~d~G~Y~C~a~n~-~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~- 339 (978)
+.+|+|.|+|.|.|. .|...+..+.|.|..++.+........+.+|+.++|.|.+ .+.|.+.++|+|++..+..
T Consensus 87 ~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~ 165 (403)
T 3laf_A 87 SRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEV-IGDPMPTIHWQKNQQDLNPI 165 (403)
T ss_dssp BTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCE-ECSSCCEEEEEESSSBCCCC
T ss_pred cCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEE-cccCCCeEEEEECCEecccc
Confidence 567999999999965 4566677788888777766666667788899999999998 5778899999999977532
Q ss_pred cccceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEE
Q psy12060 340 EEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRL 419 (978)
Q Consensus 340 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l 419 (978)
....+.....++.|.|.+++.+|+|.|+|.|.|..+.. .+..+.|.|...+....... .........+.+|+.++|
T Consensus 166 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~--~~~~~~l~v~~~p~~~~~~~--~~~~~~~~~~~~g~~~~l 241 (403)
T 3laf_A 166 PGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTR--TGNEAEVRILSDPGLHRQLY--FLQRPSNVIAIEGKDAVL 241 (403)
T ss_dssp TTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCC--BCCCEEEEEECCCCCCEEEE--EEECCCCEEEETTSCEEE
T ss_pred CCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCce--eccceeEEEecCCCcccCce--EecCCCceEecCCCcEEE
Confidence 33455666677899999999999999999999976532 22346777776554321100 000011234678999999
Q ss_pred EEEEeecCCCeeEEEEcCccCCCCc--eeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCc
Q psy12060 420 ECVAFGYPVPSYNWTRRGSPLPRNA--YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTD 497 (978)
Q Consensus 420 ~C~~~g~p~~~v~W~~~~~~l~~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~ 497 (978)
.|.+.|.|.+.+.|++++..+.... .....+..|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.+...+..
T Consensus 242 ~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~ 321 (403)
T 3laf_A 242 ECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSN 321 (403)
T ss_dssp CCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCC
T ss_pred EEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcc
Confidence 9999999999999999999886433 23345678999999999999999999999999999999999999999888888
Q ss_pred ccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEE-EecCEEEEEeCCCCCCCeEEEEEEEcCCCceee
Q psy12060 498 KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF-IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576 (978)
Q Consensus 498 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 576 (978)
..+.+|++++|.|.+.|.|.+.+.|+|+|..+.. ..++. ...+.|.|..+.. +|+|.|+|.|.|..|....
T Consensus 322 ~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~-------~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~ 393 (403)
T 3laf_A 322 LYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIP-------SDYFQIVGGSNLRILGVVK-SDEGFYQCVAENEAGNAQS 393 (403)
T ss_dssp EECCTTCCEEECCEEEEESCCEEEEEETTEECCC-------SSSEEEETTTEEEESSCCG-GGCEEEEEEEEETTEEEEE
T ss_pred eEEecCCeEEEEEEEeeccCCEEEEEECCEECCC-------CCcEEEecCccEEEecccc-ccCEEEEEEEEcCCceEEE
Confidence 8899999999999999999999999999998863 22333 3456899999986 9999999999999999988
Q ss_pred EEEEEEEE
Q psy12060 577 SAQLRVLT 584 (978)
Q Consensus 577 ~~~l~v~~ 584 (978)
.+.|.|..
T Consensus 394 ~~~l~V~~ 401 (403)
T 3laf_A 394 SAQLIVPK 401 (403)
T ss_dssp EEEEECCC
T ss_pred EEEEEEeC
Confidence 88887763
No 27
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=381.10 Aligned_cols=393 Identities=13% Similarity=0.100 Sum_probs=239.1
Q ss_pred CCCCCeEEEEEEEeCceeEEeEEEEEEE------------eeec---ccccCCCCeeeecccCeEEEeCCCCCCCCceEE
Q psy12060 265 QVEDRGSYHCKASNKFGSIISESVQLAF------------GFIG---EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYY 329 (978)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v------------~~~~---~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~ 329 (978)
...|.|.|+|...+..+...|..+++.. ...+ .+...+....+.+|+.+.|.|.+ .+.|.+.|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v-~g~P~p~i~ 81 (423)
T 3qs7_E 3 GNQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLV-DAPGNISCL 81 (423)
T ss_dssp -----------------------------------------------------CEEEECSSCCEEEEEEC-SCCSSCEEE
T ss_pred ccCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEE-EcCCCCeEE
Confidence 3578999999999876654333332221 1111 11222335678899999999999 568999999
Q ss_pred EecccccccccccceEEEee--CCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCC
Q psy12060 330 WARDYFPNFVEEDKRVFVSY--DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407 (978)
Q Consensus 330 W~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~ 407 (978)
|++++..+.... .+.... ..+|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|..+|... .. .
T Consensus 82 W~~~~~~l~~~~--~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~---~~~~~l~V~~~p~~~-~~--------~ 147 (423)
T 3qs7_E 82 WVFKHSSLNCQP--HFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNY---TILFTVSIRNTLLYT-LR--------R 147 (423)
T ss_dssp EEETTEEECCCC--BC-----CEEEEEESSCCSSSCSEEEEEEEC--CEE---EEEEEEEEC-----C-EE--------E
T ss_pred EEECCCccCccc--eeccccceEEEEEEeecCcccCEEEEEEEEcCCCcE---EEEEEEEEecCcccc-cc--------C
Confidence 999886532211 111011 1259999999999999999999987543 334778887544221 00 1
Q ss_pred CCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCC-CCCCCCeEEEEEEEeCCCceEE-EEEEEE
Q psy12060 408 PEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPN-VKVEDQGEYICRASNDRSALES-SVTISI 485 (978)
Q Consensus 408 ~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V 485 (978)
+..+..|+.++|.|.+.|.|.|.|+|+|++..+...... .....+.... +...|+|.|+|.|.|..|.... .+.|.|
T Consensus 148 p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~-~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V 226 (423)
T 3qs7_E 148 PYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEE-SPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDL 226 (423)
T ss_dssp EEEEECSSSSCEEEEEEESSCCEEEEEEC--------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEES
T ss_pred CcEeccCCceEEEEEEeeecCCeEEEEECCCCCcccccc-ccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEE
Confidence 123346888899999999999999999998865422110 0011111111 1578999999999999987654 367777
Q ss_pred EeeceeeccCCcccccCCCceeEEEEeec-CCCCeeEEeECCEECCCCCC---CCCCCCcEEEecCEEEEEeCCCCCCCe
Q psy12060 486 QAEPNFTIPLTDKHMDNQADLTWTCEAFG-VPDVTYSWFRNGELLNSETL---PLEDQDRYFIQDNVLTIRYLNPERDPA 561 (978)
Q Consensus 486 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~g~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~~d~G 561 (978)
..+|.+ ++....+.+|+++.|.|.+.| .|.+.|+|+|+|..+..... ......+.....+.|.|.++.. +|+|
T Consensus 227 ~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G 303 (423)
T 3qs7_E 227 NQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVAR-NDTG 303 (423)
T ss_dssp SSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCT-TTCE
T ss_pred ecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCH-HHCE
Confidence 766655 445677899999999999998 67799999999987753210 0000112233445799999997 9999
Q ss_pred EEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecC
Q psy12060 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641 (978)
Q Consensus 562 ~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~ 641 (978)
.|+|.|.|. ....+.|.|.. +|.+...+......+.+|+++.|.|.+.|.|.|.|+|+|+|..+....+. ....-
T Consensus 304 ~Y~C~A~N~---~~~~~~L~V~~-~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~-~~~~~ 378 (423)
T 3qs7_E 304 YYTCSSSKH---PSQSALVTIVE-KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG-LDNGY 378 (423)
T ss_dssp EEEEEETTE---EEEEEEEEEES-SCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB-CSSSS
T ss_pred EEEEEEecC---CCceEEEEEEe-CCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcccc-ccCCc
Confidence 999999998 56677787774 56555544444566889999999999999999999999999998654310 00011
Q ss_pred cEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCce
Q psy12060 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681 (978)
Q Consensus 642 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 681 (978)
.+.+.....+|+|.|+|.|.|..|....++.|.|...|..
T Consensus 379 ~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~ 418 (423)
T 3qs7_E 379 SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKH 418 (423)
T ss_dssp EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-------
T ss_pred EEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcc
Confidence 1222556778999999999999999999999999877653
No 28
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-41 Score=375.33 Aligned_cols=363 Identities=23% Similarity=0.352 Sum_probs=290.5
Q ss_pred ccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeee-----eeecceeeEEEEEee
Q psy12060 299 NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSAL-----EQIDAGNYSCNVQSK 373 (978)
Q Consensus 299 ~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~-----~~~d~G~Y~C~~~n~ 373 (978)
...+....+.+|+.++|.|.+..+.|.+.|.|+|+|..+......+.....++.|.|.++ +.+|+|.|+|.|.+.
T Consensus 25 ~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~ 104 (403)
T 3laf_A 25 VSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLG 104 (403)
T ss_dssp EECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEECG
T ss_pred EeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEeC
Confidence 344566678899999999999766788999999999887665667777788899999888 678999999999975
Q ss_pred cccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCC---c-eeeec
Q psy12060 374 VSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRN---A-YFENF 449 (978)
Q Consensus 374 ~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~---~-~~~~~ 449 (978)
.+.. ..+..+.|.|..++... .. .....+.+|++++|.|.+.|.|.+.|+|+|++..+... . .....
T Consensus 105 ~~~~-~~s~~~~l~v~~p~~~~--~~------~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 175 (403)
T 3laf_A 105 DSGS-IISRTAKVMVAGPLRFL--SQ------TESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLP 175 (403)
T ss_dssp GGCE-EECCCEEEEECCCCEEC--SC------CCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECT
T ss_pred CCcc-EEEEEEEEEecCCCccc--cC------CCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcC
Confidence 4322 22344777887654321 11 11245679999999999999999999999999987432 1 22344
Q ss_pred ccEEEeCCCCCCCCeEEEEEEEeCCCce-EEEEEEEEEeece------eeccCCcccccCCCceeEEEEeecCCCCeeEE
Q psy12060 450 NRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISIQAEPN------FTIPLTDKHMDNQADLTWTCEAFGVPDVTYSW 522 (978)
Q Consensus 450 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~------~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W 522 (978)
++.|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|...|. +...+....+.+|++++|.|.+.+.|.+.+.|
T Consensus 176 ~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W 255 (403)
T 3laf_A 176 SGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTW 255 (403)
T ss_dssp TSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEE
T ss_pred CceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEE
Confidence 6789999999999999999999987663 3557777776553 33455666788999999999999999999999
Q ss_pred eECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecC
Q psy12060 523 FRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 602 (978)
Q Consensus 523 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~ 602 (978)
++++..+... ...........|.|.++.. +|+|.|+|.|.|..|.......+.|.. +|.+...+ ....+.+
T Consensus 256 ~~~~~~~~~~-----~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~--~~~~~~~ 326 (403)
T 3laf_A 256 LRGEEVIQLR-----SKKYSLLGGSNLLISNVTD-DDSGTYTCVVTYKNENISASAELTVLV-PPWFLNHP--SNLYAYE 326 (403)
T ss_dssp EETTEECCCS-----SSSEEEETTTEEEECSCCG-GGCEEEEEEEEETTEEEEEEEEEEEEE-EEEEEECC--CCEECCT
T ss_pred EECCeeccCC-----CceEEECCccEEEEeCCCH-HHCEEEEEEEEcCCCceEEEEEEEEEC-CCcEeecC--cceEEec
Confidence 9999988632 2222233456899999986 999999999999999888888888875 56665544 3455789
Q ss_pred CCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCC
Q psy12060 603 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679 (978)
Q Consensus 603 g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 679 (978)
|+.++|.|.+.|.|.|.+.|+++|..+....+..+...++|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 327 g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 327 SMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp TCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred CCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 99999999999999999999999999988888887778889999999999999999999999999999999886553
No 29
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.5e-40 Score=365.76 Aligned_cols=346 Identities=23% Similarity=0.354 Sum_probs=262.8
Q ss_pred ecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeee-eeecceeeEEEEEeecccccccCCceeE
Q psy12060 308 NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSAL-EQIDAGNYSCNVQSKVSDTGRNGPFFPL 386 (978)
Q Consensus 308 ~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~~~n~~~~~~~~~~~~~l 386 (978)
.+|+.+.|.|.+ .|.|.|+|+|+|||.++......++.. .++.|.|.++ +.+|+|.|+|.|.|..|..... ...|
T Consensus 21 ~eg~~v~L~C~~-~g~P~p~i~W~k~g~~l~~~~~~~~~~-~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~--~~~l 96 (384)
T 3kld_A 21 SEEKKVKLSCEV-KGNPKPHIRWKLNGTDVDIGMDFRYSV-VDGSLLINNPNKTQDAGTYQCIATNSFGTIVSR--EAKL 96 (384)
T ss_dssp CSCSEEEECCEE-EEESCCEEEEEETTEECCC----CEEE-ETTEEEEESCCHHHHCEEEEEEEEETTEEEECC--CEEE
T ss_pred CCCCeEEEEeEe-cCCCCCEEEEEECCEECcCCCCccEEE-ECCEEEEcCCCCcccCEEEEEEEEcCcccEEec--ceEE
Confidence 367789999998 688999999999998865444444443 5678888876 7899999999999987643322 3455
Q ss_pred EEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEe-ecCCCeeEEEEcCccCCCCce--eeecccEEEeCCCCCCCC
Q psy12060 387 KVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF-GYPVPSYNWTRRGSPLPRNAY--FENFNRILTIPNVKVEDQ 463 (978)
Q Consensus 387 ~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~l~~~~~--~~~~~~~L~i~~~~~~d~ 463 (978)
.+...+..... ......+.+|+.+.|.|.+. +.|.+.+.|++++.++....+ ....++.|.|.+++.+|+
T Consensus 97 ~v~~~~~~~~~-------~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 169 (384)
T 3kld_A 97 QFAYLENFKTR-------TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDV 169 (384)
T ss_dssp EEEEECCCSCC-------CCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGC
T ss_pred EEecccccccC-------CCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHC
Confidence 55443322111 01123567899999999765 567789999999988754332 233456899999999999
Q ss_pred eEEEEEEEeCCCceEEE---EEEEEE-------eeceeec-cCCcccccCCCceeEEEEeecCCCCeeEEeEC-CEECCC
Q psy12060 464 GEYICRASNDRSALESS---VTISIQ-------AEPNFTI-PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRN-GELLNS 531 (978)
Q Consensus 464 G~Y~C~a~n~~g~~~~~---~~l~V~-------~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~-g~~~~~ 531 (978)
|.|+|.|.|..+..... ..+.+. .+|.+.. .+....+.+|+++.|.|.+.|.|.+.+.|+|+ +..+..
T Consensus 170 G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~ 249 (384)
T 3kld_A 170 GNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIAR 249 (384)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCT
T ss_pred ceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccc
Confidence 99999999988764321 223222 2344433 34556688999999999999999999999994 444432
Q ss_pred CCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEe
Q psy12060 532 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN 611 (978)
Q Consensus 532 ~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~ 611 (978)
..+.....+.|.|.++.. +|+|.|+|.|.|..|.......|.|.. +|.+...+ ....+..|+.+.|.|.
T Consensus 250 -------~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~~~~~~~l~v~~-~P~~~~~~--~~~~v~~g~~v~l~C~ 318 (384)
T 3kld_A 250 -------KARRHKSNGILEIPNFQQ-EDAGSYECVAENSRGKNVAKGQLTFYA-QPNWVQII--NDIHVAMEESVFWECK 318 (384)
T ss_dssp -------TCEECTTSCEEEECSCCG-GGCEEEEEEEEETTEEEEEEEEEEEEE-EEEEEECC--CCEEECTTCCEEEECE
T ss_pred -------cceecCCCcEEEECCCCh-hhCEEEEEEEEcCCCeEEEEEEEEEec-CCccccCC--CceEecCCCCEEEEeE
Confidence 122223456899999997 999999999999999988888888875 56555443 3455889999999999
Q ss_pred eccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 612 PEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 612 ~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
+.|.|.|.|+|+|+|..+....++.+ .+++|.|.++..+|+|.|+|.|.|..|...+++.|.|.
T Consensus 319 ~~g~P~p~i~W~k~g~~l~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 319 ANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp EEEESCCEEEEEETTEECCCBTTEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCccCCCeEEEEECCEECCCCccEEE-eCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 99999999999999999987777654 56789999999999999999999999999999999885
No 30
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.2e-39 Score=361.68 Aligned_cols=361 Identities=24% Similarity=0.368 Sum_probs=271.2
Q ss_pred EEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEE
Q psy12060 291 AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNV 370 (978)
Q Consensus 291 ~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 370 (978)
.|..+|.+...+....+.+|+.++|.|.+..+.|.+.|+|+|+|.++............+++|.|.+++.+|+|.|+|.|
T Consensus 2 ~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 81 (395)
T 1bih_A 2 PVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFA 81 (395)
T ss_dssp ---CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEE
T ss_pred CcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEE
Confidence 34556666666666778899999999999655889999999999886544433334445678999999999999999999
Q ss_pred EeecccccccCCceeEEEcc--CCCccccccCCCCCCCCCCCCCCCCcEEEEEEE-eecCCCeeEEEEcCc---cCC---
Q psy12060 371 QSKVSDTGRNGPFFPLKVFP--HSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTRRGS---PLP--- 441 (978)
Q Consensus 371 ~n~~~~~~~~~~~~~l~V~~--~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~v~W~~~~~---~l~--- 441 (978)
.|..|.... ..+.|.|.. .|.. ......+.+|+.++|.|.+ .+.|.+.|+|++++. +..
T Consensus 82 ~n~~g~~~s--~~~~l~v~~~~~p~~----------~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~ 149 (395)
T 1bih_A 82 ETPAGVASS--RVISFRKTYLIASPA----------KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVT 149 (395)
T ss_dssp EETTEEEEC--CCEEEEEEEEECCCC----------EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCC
T ss_pred EeCCCeEEe--EEEEEEEEEeecCCc----------CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccc
Confidence 997754332 224454432 2211 0113456799999999996 789999999999862 221
Q ss_pred --CCceeeecccEEEeCCCCCCCCe---EEEEEEEeCCCceEEEEEEEEE-------------eeceeeccCCcccccCC
Q psy12060 442 --RNAYFENFNRILTIPNVKVEDQG---EYICRASNDRSALESSVTISIQ-------------AEPNFTIPLTDKHMDNQ 503 (978)
Q Consensus 442 --~~~~~~~~~~~L~i~~~~~~d~G---~Y~C~a~n~~g~~~~~~~l~V~-------------~~p~~~~~~~~~~~~~g 503 (978)
........++.|.|.+++.+|+| .|+|.|.|..|.........+. .+|.+ .+....+.+|
T Consensus 150 ~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G 227 (395)
T 1bih_A 150 DFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAG 227 (395)
T ss_dssp CCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETT
T ss_pred cccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECC
Confidence 11122334568999999999999 9999999998875443322211 12333 2455678999
Q ss_pred CceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE----ecCEEEEEeCCCCCCCeEEEEEEEcCCCceee-EE
Q psy12060 504 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI----QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS-SA 578 (978)
Q Consensus 504 ~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~-~~ 578 (978)
+.++|.|.+.|.|.+.+.|+|+|..+.... ..++.. ....|.|.++.. +|+|.|+|.|.|..|.... ..
T Consensus 228 ~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~-----~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~ 301 (395)
T 1bih_A 228 DVTMIYCMYGSNPMGYPNYFKNGKDVNGNP-----EDRITRHNRTSGKRLLFKTTLP-EDEGVYTCEVDNGVGKPQKHSL 301 (395)
T ss_dssp SCEEEEEEEECSSCCCCEEEETTEECCCCT-----TSSEESCSSSTTSEEEESSCCG-GGCEEEEEEECCSSSSCEEEEE
T ss_pred CcEEEEEEeccCCCCeEEEEECCEEcCCCC-----ceeEEEEecCCCceEEEccCCh-hhCEEEEEEEEeCCCCceEEEE
Confidence 999999999999999999999999886431 122221 122799999986 9999999999999988665 77
Q ss_pred EEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEE
Q psy12060 579 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 658 (978)
Q Consensus 579 ~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 658 (978)
.|.|.. +|.+...+.. ...+..|+.++|.|.+.|.|.|.+.|+++|..+..+ ++.+ .++.|.|.++..+|+|.|+|
T Consensus 302 ~l~V~~-~P~~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~-~~~~L~i~~~~~~d~G~Y~C 377 (395)
T 1bih_A 302 KLTVVS-APKYEQKPEK-VIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATV-TDSGLVIKGVKNGDKGYYGC 377 (395)
T ss_dssp EEEEEE-EEEEEECCCS-EEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEE-ETTEEEESSCCSTTCEEEEE
T ss_pred EEEEEc-CCccccCCCc-ceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEE-ECCEEEEeeCCcccCEEEEE
Confidence 888874 6666655432 356889999999999999999999999999998765 4444 45689999999999999999
Q ss_pred EEEeCCceeeeeEEEEE
Q psy12060 659 TATNVHGMDESKGRLIV 675 (978)
Q Consensus 659 ~a~n~~g~~~~~~~l~v 675 (978)
.|.|..|....++.|.|
T Consensus 378 ~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 378 RATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEccCCCceEEEEEEE
Confidence 99999999998888876
No 31
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=7.8e-39 Score=356.53 Aligned_cols=354 Identities=23% Similarity=0.364 Sum_probs=277.2
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCc----eeeecccEEEeC----CCCCCCCeEEEEEEEeCCCce-EE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA----YFENFNRILTIP----NVKVEDQGEYICRASNDRSAL-ES 479 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~----~~~~~~~~L~i~----~~~~~d~G~Y~C~a~n~~g~~-~~ 479 (978)
..+.+|+.++|.|.+.|.|.+.|+|+|+|..+.... .....+++|.|. +++.+|+|.|+|.|.|..|.. +.
T Consensus 27 ~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~ 106 (404)
T 3p3y_A 27 HIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSN 106 (404)
T ss_dssp CEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEE
T ss_pred EEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeee
Confidence 356799999999999999999999999999875321 122345566664 888999999999999998876 46
Q ss_pred EEEEEEEeeceeec-cCCcccccCCCceeEEEEe-ecCCCCeeEEeECCEECCCCCCCCCCCCcEEE-ecCEEEEEeCCC
Q psy12060 480 SVTISIQAEPNFTI-PLTDKHMDNQADLTWTCEA-FGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP 556 (978)
Q Consensus 480 ~~~l~V~~~p~~~~-~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~ 556 (978)
.+.|.|..+|.+.. .+.+..+.+|++++|.|.+ .+.|.+.+.|++++..... ...++.. .++.|.|.++..
T Consensus 107 ~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~------~~~~~~~~~~~~l~i~~v~~ 180 (404)
T 3p3y_A 107 RIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPIT------QDKRVSQGHNGDLYFSNVML 180 (404)
T ss_dssp EEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCC------CCSSEEECTTSCEEESSCCS
T ss_pred eEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccC------CCCcEEEcCCCcEEEEeeee
Confidence 78899988876543 3455678999999999998 6889999999998754321 2223333 456899999987
Q ss_pred CCC-CeEEEEEEEcCCCceeeE---EEEEEEEc------CCccccCC-CCcceeecCCCeEEEEEeeccCCCCeeEEeeC
Q psy12060 557 ERD-PAMYQCRAKNQLKTRYSS---AQLRVLTL------KPSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 625 (978)
Q Consensus 557 ~~d-~G~Y~C~a~n~~g~~~~~---~~l~v~~~------~p~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~ 625 (978)
.| +|.|+|.|.|..+..... ..+.+... +|.+.... ......+.+|+.+.|.|.+.+.|.+.+.|+++
T Consensus 181 -~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~ 259 (404)
T 3p3y_A 181 -QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKK 259 (404)
T ss_dssp -GGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEET
T ss_pred -ccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEEC
Confidence 77 699999999988764322 34444421 23332221 11345578999999999999999999999999
Q ss_pred CEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeee
Q psy12060 626 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 705 (978)
Q Consensus 626 g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~ 705 (978)
|..+..........+++|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+.. .+....+..|+.+.|.|.+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~~v~~g~~~~l~C~~~g 338 (404)
T 3p3y_A 260 GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLD-EPKNLILAPGEDGRLVCRANG 338 (404)
T ss_dssp TBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEE-CCCCEEECTTCCEEEECEEEE
T ss_pred CEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeec-cCCcceeecCCcEEEEEEccc
Confidence 9988776655555567899999999999999999999999999999999988776544 456678889999999999999
Q ss_pred cCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcC
Q psy12060 706 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 776 (978)
Q Consensus 706 ~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~ 776 (978)
.|.+ .+.|+++|..+..... .......++.|.|.++..+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 339 ~p~p--~v~W~~~g~~~~~~~~----~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 339 NPKP--TVQWMVNGEPLQSAPP----NPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp ESCC--EEEEEETTEEGGGSCC----CTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cCCC--ceEEEECCEecCCCCC----CceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9876 4699999998865321 123334567999999999999999999999999999999998864
No 32
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=6.7e-39 Score=353.75 Aligned_cols=357 Identities=22% Similarity=0.336 Sum_probs=273.6
Q ss_pred ecccccCCCCeee---ecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeee-ecceeeEEEE
Q psy12060 295 IGEFNLKRAPEIG---NQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQ-IDAGNYSCNV 370 (978)
Q Consensus 295 ~~~~~~~~~~~~~---~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~ 370 (978)
+|.+...+..... ..|+.++|.|.+ .|.|.+.|+|+|+|.++......++.+ .+++|.|.++.. +|+|.|+|.|
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~k~g~~~~~~~~~~~~~-~~~~L~i~~~~~~~D~G~Y~C~a 81 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRA-RANPPATYRWKMNGTELKMGPDSRYRL-VAGDLVISNPVKAKDAGSYQCVA 81 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEE-EEESCCEEEEEETTEECCCSTTSSEEE-ETTEEEEESCCHHHHCEEEEEEE
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEe-cCCCCCEEEEEECCEECCcCCCccEEe-eCCeEEEecccccccCEEEEEEE
Confidence 3444444444444 577889999998 577889999999998865544555554 468899999997 9999999999
Q ss_pred EeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEe-ecCCCeeEEEEcCccCC--CCc-e-
Q psy12060 371 QSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF-GYPVPSYNWTRRGSPLP--RNA-Y- 445 (978)
Q Consensus 371 ~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~l~--~~~-~- 445 (978)
.|..|... +..+.|.|...+..... ...+..+.+|++++|.|.+. +.|.+.|.|++++.++. ... .
T Consensus 82 ~n~~g~~~--s~~~~l~v~~~~~~~~~-------~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 152 (382)
T 1cs6_A 82 TNARGTVV--SREASLRFGFLQEFSAE-------ERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRF 152 (382)
T ss_dssp EETTEEEE--CCCEEEEEEEECCCCSS-------CCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEE
T ss_pred EcCCcEEE--ecceEEEeecccccccc-------CCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEE
Confidence 99876432 22356666544332111 11234578999999999864 67889999999998753 222 2
Q ss_pred eeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEE-----EEEEEE------eeceeec-cCCcccccCCCceeEEEEee
Q psy12060 446 FENFNRILTIPNVKVEDQGEYICRASNDRSALESS-----VTISIQ------AEPNFTI-PLTDKHMDNQADLTWTCEAF 513 (978)
Q Consensus 446 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-----~~l~V~------~~p~~~~-~~~~~~~~~g~~~~l~C~~~ 513 (978)
....++.|.|.+++.+|+|.|+|.|.|..|..... +.|.|. .+|.+.. .+....+.+|+.++|.|.+.
T Consensus 153 ~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~ 232 (382)
T 1cs6_A 153 VSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAF 232 (382)
T ss_dssp ECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEE
T ss_pred EecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEc
Confidence 22334789999999999999999999987543322 345543 2566554 34567789999999999999
Q ss_pred cCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCC
Q psy12060 514 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 593 (978)
Q Consensus 514 ~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~ 593 (978)
+.|.+.+.|+|++..+.. ........|.|.++.. +|+|.|+|.|.|..|.......|.|.. +|.+...+
T Consensus 233 g~p~~~i~W~~~~~~~~~---------~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~ 301 (382)
T 1cs6_A 233 GNPVPQIKWRKLDGSQTS---------KWLSSEPLLHIQNVDF-EDEGTYECEAENIKGRDTYQGRIIIHA-QPDWLDVI 301 (382)
T ss_dssp EESCCEEEEEECCSCCSC---------CCSBSSSEEEECSCCG-GGCEEEEEEEEETTEEEEEEEEEEEEE-EEEEEECC
T ss_pred cCCCCEEEEEECCccccc---------EEecCCcEEEEccCCh-hhCEEEEEEEEcCCCeEEEEEEEEEec-CCCcccCC
Confidence 999999999998876542 1112356899999986 899999999999999888888888875 56655443
Q ss_pred CCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEE
Q psy12060 594 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 673 (978)
Q Consensus 594 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 673 (978)
....+..|+.++|.|.+.|.|.|.+.|+++|..+....++.+ .++.|.|.++..+|+|.|+|.|.|..|....++.|
T Consensus 302 --~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 378 (382)
T 1cs6_A 302 --TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEV-SGGELRFSKLVLEDSGMYQCVAENKHGTVYASAEL 378 (382)
T ss_dssp --CCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred --CccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEE-ECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEE
Confidence 334578999999999999999999999999999988776655 46789999999999999999999999999999988
Q ss_pred EEE
Q psy12060 674 IVL 676 (978)
Q Consensus 674 ~v~ 676 (978)
.|.
T Consensus 379 ~V~ 381 (382)
T 1cs6_A 379 TVQ 381 (382)
T ss_dssp EEE
T ss_pred EEe
Confidence 875
No 33
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=4.7e-38 Score=347.91 Aligned_cols=343 Identities=22% Similarity=0.350 Sum_probs=268.0
Q ss_pred CCCCCcEEEEEEEeecCCCeeEEEE-cCccCCCCc--eeeecccEEEeCCCCCCC------CeEEEEEEEeCCCce-EEE
Q psy12060 411 PKAGDKVRLECVAFGYPVPSYNWTR-RGSPLPRNA--YFENFNRILTIPNVKVED------QGEYICRASNDRSAL-ESS 480 (978)
Q Consensus 411 v~~G~~~~l~C~~~g~p~~~v~W~~-~~~~l~~~~--~~~~~~~~L~i~~~~~~d------~G~Y~C~a~n~~g~~-~~~ 480 (978)
+.+|+.++|.|.+.|.|.|+|+|+| +|..+.... .....+++|.|.+++.+| +|.|+|.|.|..|.. +..
T Consensus 16 ~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~ 95 (388)
T 2v5m_A 16 FSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRD 95 (388)
T ss_dssp EETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCC
T ss_pred EEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEEEEEccCCeEEecc
Confidence 5689999999999999999999999 787775432 233456789999999987 999999999998864 456
Q ss_pred EEEEEEeeceeeccCCcccccCCCceeEEEEeecCC---CCeeEEeECCEECCCCCCCCCCCCcEE-EecCEEEEEeCCC
Q psy12060 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP---DVTYSWFRNGELLNSETLPLEDQDRYF-IQDNVLTIRYLNP 556 (978)
Q Consensus 481 ~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p---~~~i~W~~~g~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~ 556 (978)
+.|.|..+|.+...+....+.+|++++|.|.+.+.+ .+.+.|++++..+...... ...++. ..++.|.|.++..
T Consensus 96 ~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~L~i~~v~~ 173 (388)
T 2v5m_A 96 VHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAE--YDGKYLVLPSGELHIREVGP 173 (388)
T ss_dssp EEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSC--BTTTEEECTTSCEEESSCCG
T ss_pred eEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccC--CCCcEEEccCCcEEEecCCc
Confidence 788888888887777778899999999999998764 3899999998765422110 123333 3456899999986
Q ss_pred CCCC-eEEEEEEEcCCCceee-E---EEEEEEEc----CCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCE
Q psy12060 557 ERDP-AMYQCRAKNQLKTRYS-S---AQLRVLTL----KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 627 (978)
Q Consensus 557 ~~d~-G~Y~C~a~n~~g~~~~-~---~~l~v~~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~ 627 (978)
+|+ |.|+|.+.|..+.... . ..+.|... +|.+... ......+.+|+.++|.|.+.|.|.+.+.|++++.
T Consensus 174 -~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~ 251 (388)
T 2v5m_A 174 -EDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPAL-VQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIE 251 (388)
T ss_dssp -GGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSS-CCCCEEEETTSCEEECCCCEEESCCEEEEEEECT
T ss_pred -cccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccc-cCCceEEeeCCcEEEEEECCCCCCCEEEEEecCC
Confidence 898 9999999998654322 1 24555421 1211111 1123447889999999999999999999999753
Q ss_pred E------ecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEE
Q psy12060 628 I------IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 701 (978)
Q Consensus 628 ~------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C 701 (978)
. +....+.. ..+++|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+.. .+....+..|+.+.|.|
T Consensus 252 ~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~~v~~g~~~~l~C 329 (388)
T 2v5m_A 252 GTTRKQAVVLNDRVK-QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKI-DPPTQTVDFGRPAVFTC 329 (388)
T ss_dssp TSSCEEECCCSSSEE-EETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEE-ESSEEEECTTSCEEEEE
T ss_pred CCcccccccccCcee-cccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCcccc-CCCcEEecCCCCEEEEE
Confidence 2 22233332 3467899999999999999999999999998889999988776544 35567888999999999
Q ss_pred EeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy12060 702 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774 (978)
Q Consensus 702 ~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v 774 (978)
.+.+.|.+ .+.|+++|..+.. .++.|.|.++..+|+|.|+|.|.|..|..++++.|.|
T Consensus 330 ~~~g~p~p--~i~W~~~g~~i~~-------------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 330 QYTGNPIK--TVSWMKDGKAIGH-------------SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEEEECCC--EEEEEETTEECSC-------------CSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EeccccCC--eEEEEECCEECcc-------------CCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 99999876 5699999988753 2468999999999999999999999999999998876
No 34
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=5.7e-37 Score=339.34 Aligned_cols=366 Identities=20% Similarity=0.286 Sum_probs=271.6
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeEC--CEECCCCCCCCCCCCcEEEe----cCEEEEEeCCCCCCCe
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRN--GELLNSETLPLEDQDRYFIQ----DNVLTIRYLNPERDPA 561 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--g~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G 561 (978)
+|.+.. +.+..+.+|++++|.|.+.|.|.+.|+|+|+ |..+...... ...++.+. .+.|.|.++.. +|+|
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~-~D~G 76 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKS--LDGRIEVKGQHGSSSLHIKDVKL-SDSG 76 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CC--SSSSEEEEECSSEEEEEEESCCG-GGCE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCC--CCCeEEEeccCCcceEEEcccCh-hhCE
Confidence 356655 4456778899999999999999999999999 8888643211 13444443 34899999997 9999
Q ss_pred EEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCC--cEEEee
Q psy12060 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 639 (978)
Q Consensus 562 ~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~--~~~~~~ 639 (978)
.|+|.|.|..|.....+.|.|.. +|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|+++|..+.... ++.+..
T Consensus 77 ~Y~C~a~n~~g~~~~~~~l~V~~-~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~ 153 (389)
T 2jll_A 77 RYDCEAASRIGGHQKSMYLDIEY-APKFISNQ--TIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYS 153 (389)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEE-EEEECCSC--CEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEE
T ss_pred EEEEEEEeCCCCcceEEEEEEEe-CCEEecCc--ceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEec
Confidence 99999999999988888888874 56655432 23357899999999999999999999999999987654 455544
Q ss_pred cC---cEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeee----cCCcCeE
Q psy12060 640 NG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT----EELLDVA 712 (978)
Q Consensus 640 ~~---~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~----~p~~~~~ 712 (978)
++ .|.|.++..+|+|.|+|.|.|..|.......+.+...|..+.. .......+..+.|.|.... .|...+.
T Consensus 154 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~--~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~ 231 (389)
T 2jll_A 154 TGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYG--VKIIELSQTTAKVSFNKPDSHGGVPIHHYQ 231 (389)
T ss_dssp CSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEE--EEEEEECSSCEEEEEECCSCCTTSCEEEEE
T ss_pred cCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcc--eEEeeccCCEEEEEEeCCCCCCCcceEEEE
Confidence 33 5999999999999999999999999888888887666543211 1223345678999998532 2333456
Q ss_pred EEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEc----CCCCCCCceEEEE
Q psy12060 713 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVE 788 (978)
Q Consensus 713 ~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~----~~P~~P~~~~~~~ 788 (978)
+.|.+++..... ..........+.|.++...+.|.|+|.|.|..|....+..+.+. .+|.+| .+....
T Consensus 232 v~~~~~~~~~~~-------~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p-~~~~~~ 303 (389)
T 2jll_A 232 VDVKEVASEIWK-------IVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPP-SIHGQP 303 (389)
T ss_dssp EEEEETTCSCCE-------EEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCC-CEEEEE
T ss_pred EEEEECCCcccE-------EeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCC-cccccc
Confidence 788887653211 01111234689999999999999999999999976544433332 367777 477767
Q ss_pred eeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCcc
Q psy12060 789 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 868 (978)
Q Consensus 789 ~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~ 868 (978)
.+.+++.|+|.+|.++|++|.+|.|+|+..+...|...... ......+++.+ |.|++.|.|||+|.|..|.
T Consensus 304 ~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~i~~-L~~~t~Y~~~V~A~n~~G~ 374 (389)
T 2jll_A 304 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKV--------QGNKDHIILEH-LQWTMGYEVQITAANRLGY 374 (389)
T ss_dssp ETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBCCEE--------CTTCCEEEECS-CCTTCEEEEEEEEEC-CCB
T ss_pred CcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeEeec--------cCCcceEEeCC-cCCCCEEEEEEEEEcCCcC
Confidence 89999999999999989999999999998776667532111 12456788999 9999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q psy12060 869 GEPSSPSPQYNTP 881 (978)
Q Consensus 869 g~~s~~~~~~~t~ 881 (978)
|++|.. .++|.
T Consensus 375 s~~s~~--~~~T~ 385 (389)
T 2jll_A 375 SEPTVY--EFSMP 385 (389)
T ss_dssp CCCEEE--EEECC
T ss_pred CCceee--EecCC
Confidence 999876 46664
No 35
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=368.45 Aligned_cols=437 Identities=17% Similarity=0.179 Sum_probs=308.4
Q ss_pred CCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEE
Q psy12060 502 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR 581 (978)
Q Consensus 502 ~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 581 (978)
.+..+.|.|.+.|.|.+.+.|.|+|..+... ....+.|..+......+.|.|++.+..|..... .+.
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~------------~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~ 156 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRTW------------NRAELAISTFWPNFYQVIFEVITSGHQGYLAID-EVK 156 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCSSC------------EEEEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBE
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCCce------------eEEEEEEeecCCCceEEEEEEEecCCceEEEEe-eEE
Confidence 3458999999999999999999999776421 112344544322234588999888877754322 222
Q ss_pred EEE----cCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeE-Ee--eCCEEecCCCcEEEe---ecCcEEEccccCC
Q psy12060 582 VLT----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV-WK--KDGNIIGSGGRRKIF---ENGNLLISPVSRD 651 (978)
Q Consensus 582 v~~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~-W~--~~g~~~~~~~~~~~~---~~~~l~i~~~~~~ 651 (978)
+.. .+|.+. . .....+..|++++|.|.+.|.|.|.+. |+ ++|..+.......+. ..++|.|.++...
T Consensus 157 ~~~~~~~~~p~~~-~--~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~ 233 (731)
T 2v5y_A 157 VLGHPCTRTPHFL-R--IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKR 233 (731)
T ss_dssp EESSCCSSSCEEC-C--CCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTT
T ss_pred eeecccccccccc-c--ccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccc
Confidence 322 235544 2 245678999999999999999999888 77 678766543221111 1357999999999
Q ss_pred CCEEEEEEEEeCCce-eeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeee----cCCcCeEEEEeeCCEEccccc
Q psy12060 652 DSGIYSCTATNVHGM-DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT----EELLDVAYIWTHNGVRIGNMD 726 (978)
Q Consensus 652 d~G~Y~C~a~n~~g~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~----~p~~~~~~~W~~~g~~~~~~~ 726 (978)
|.|.|+|.|.|..|. ....+.|.|..+|.... ++.+.......+.|.|.... .+...+.+.|...+....
T Consensus 234 d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~--~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~--- 308 (731)
T 2v5y_A 234 DAGKYRCMIRTEGGVGISNYAELVVKEPPVPIA--PPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWN--- 308 (731)
T ss_dssp TCEEEEEEEEETTEEEECCCEEEEEECCCCBSS--CCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCE---
T ss_pred cCeEEEEEEECCCCCcceeeEEEEEecCCCCCC--CcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCce---
Confidence 999999999999998 66678888888776432 33444456678999998643 223344566765432110
Q ss_pred cccccCCeeecCCceEEEeccCCCCCEEEEEEEE--cCCCceeeeEEEEE----cCCCCCCCceEEEEeeCCeeEEEeec
Q psy12060 727 LNELETPNINIDGGLLEITNASFADAGEYECVVK--STVGKISTKTTVIV----EGPPGLPGGVQVVEVHKTSATIQWTD 800 (978)
Q Consensus 727 ~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~--n~~G~~s~~~~l~v----~~~P~~P~~~~~~~~~~~~v~l~W~~ 800 (978)
.........+.|.++...+.+.|+|.|. |..|....+..+.+ ..||.+|.++++...+.+++.|+|.+
T Consensus 309 ------~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~ 382 (731)
T 2v5y_A 309 ------DRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEP 382 (731)
T ss_dssp ------EEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEEC
T ss_pred ------EEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEEC
Confidence 1112345789999999888899999999 99997654433333 34668899999999999999999999
Q ss_pred CCCC--CCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCC
Q psy12060 801 GATN--GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878 (978)
Q Consensus 801 p~~~--~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~ 878 (978)
|... ++++.+|.|+|+......|...... .+........+++.+ |.|++.|.|+|.|.|..|.|+ |... .+
T Consensus 383 p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~-L~p~t~Y~~~V~A~n~~G~s~-S~~~-~~ 455 (731)
T 2v5y_A 383 FGYNVTRCHSYNLTVHYCYQVGGQEQVREEV----SWDTENSHPQHTITN-LSPYTNVSVKLILMNPEGRKE-SQEL-IV 455 (731)
T ss_dssp CCHHHHCSSSCEEEEEEEEESSSSEEEEEEE----ECCSSCSSCEEEECS-CCSSCEEEEEEEEECSSCEEE-CCCE-EE
T ss_pred CCcccccceeeeEEEEEEEccCCCCccceeE----EEEecCCcceEEECC-CCCCCEEEEEEEEEcCCCCCC-CceE-EE
Confidence 8643 4678899999988764443222110 011113456789999 999999999999999999985 6554 78
Q ss_pred CCCCCCCCCCC-CceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCcc--ce----eeeeeeccceeEEEEEc
Q psy12060 879 NTPADKPYQAP-SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE--FQ----SETLKEYGNVGIAVVRI 951 (978)
Q Consensus 879 ~t~~~~P~~~P-~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~--~~----~~~~~~~~~~~~~~~~l 951 (978)
+|.+++|..+| .++.... ..++|.|+|++ |...||.|++|+|+|+..+... +. ........+. ..+.|
T Consensus 456 ~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~--P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i 530 (731)
T 2v5y_A 456 QTDEDLPGAVPTESIQGST-FEEKIFLQWRE--PTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNE--THFLF 530 (731)
T ss_dssp ECCCCCCCCCCTTTCEEEE-ETTEEEEECCC--CSCCSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTC--CEEEE
T ss_pred EccCCCCCCCCcceEEeee-cCCeEEEEEcC--CCCCCCCccceEEEEEECcCCCccccccCcceEEeecCCc--ceEEe
Confidence 88888887666 4666543 46799999998 4577899999999998876321 10 1111112222 34779
Q ss_pred CCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 952 PSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 952 ~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
.+|.|++.|.|+|+|+|.+|.|++|+
T Consensus 531 ~~L~p~t~Y~~~V~A~n~~G~g~~s~ 556 (731)
T 2v5y_A 531 FGLYPGTTYSFTIRASTAKGFGPPAT 556 (731)
T ss_dssp CSCCTTEEEEEEEEEEETTEEEEEEE
T ss_pred cCCCCCCEEEEEEEEEeCCccCCCcc
Confidence 99999999999999999999998863
No 36
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=360.76 Aligned_cols=537 Identities=15% Similarity=0.149 Sum_probs=291.1
Q ss_pred CCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCC-CCCCeEEEEEEEeCCCceEEE-EEEEEE---e
Q psy12060 413 AGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVK-VEDQGEYICRASNDRSALESS-VTISIQ---A 487 (978)
Q Consensus 413 ~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~a~n~~g~~~~~-~~l~V~---~ 487 (978)
.+.++.|.|.+.|.|.|++.|.|+|..+..-. ...+.|..+. ....+.|.|.+.+..|..... +.+.+. .
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~-----~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~ 164 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRTWN-----RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTR 164 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCSSCE-----EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSS
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCCcee-----EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccc
Confidence 35589999999999999999999998864322 2356676653 334589999888877765432 222221 4
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCCeeE-Ee--ECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYS-WF--RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~-W~--~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~ 564 (978)
+|.+. .+.+..+.+|++++|.|.+.|.|.+.+. |+ ++|..+...........+ ..+.|.|.++.. .|+|.|+
T Consensus 165 ~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~---~~~~l~I~~~~~-~d~g~Y~ 239 (731)
T 2v5y_A 165 TPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRR---FIASFNVVNTTK-RDAGKYR 239 (731)
T ss_dssp SCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSE---EEEEEEECSCCT-TTCEEEE
T ss_pred ccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEecccc---ceEEEEEccccc-ccCeEEE
Confidence 56666 4556789999999999999999999998 87 677765421000000011 125899999997 9999999
Q ss_pred EEEEcCCCc-eeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccC---CCC---eeEEeeCCEEecCCCcEEE
Q psy12060 565 CRAKNQLKT-RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA---PKP---KFVWKKDGNIIGSGGRRKI 637 (978)
Q Consensus 565 C~a~n~~g~-~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~---p~~---~i~W~~~g~~~~~~~~~~~ 637 (978)
|.|.|..|. ....+.|.|.. +|..... ..........+.|.|..... .+. .|.|...+... .....
T Consensus 240 c~A~n~~G~~~s~~~~l~V~~-~P~~~~~---p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~---~~~~~ 312 (731)
T 2v5y_A 240 CMIRTEGGVGISNYAELVVKE-PPVPIAP---PQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSW---NDRQP 312 (731)
T ss_dssp EEEEETTEEEECCCEEEEEEC-CCCBSSC---CEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSC---EEEEE
T ss_pred EEEECCCCCcceeeEEEEEec-CCCCCCC---cceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCc---eEEec
Confidence 999999997 56667777764 4543332 22333456789999986432 222 56676543211 11122
Q ss_pred eecCcEEEccccCCCCEEEEEEEE--eCCceeeeeEEEEEEeCCceeeeCCCce--EEEccccEEEEEEeeecC-----C
Q psy12060 638 FENGNLLISPVSRDDSGIYSCTAT--NVHGMDESKGRLIVLHGPSYYEQLPPKI--TIAAHRNLQLRCSAHTEE-----L 708 (978)
Q Consensus 638 ~~~~~l~i~~~~~~d~G~Y~C~a~--n~~g~~~~~~~l~v~~~p~~~~~~~~~~--~~~~g~~~~l~C~~~~~p-----~ 708 (978)
....++.|.++...+.+.|+|.|. |..|....+..+.+...+..+...|..+ .......+.|.|...... .
T Consensus 313 ~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~ 392 (731)
T 2v5y_A 313 VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHS 392 (731)
T ss_dssp CCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSS
T ss_pred cCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCccccccee
Confidence 234569999999999999999999 9999877555455544332222223333 334557899999875321 1
Q ss_pred cCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEc---CCCCCCC--c
Q psy12060 709 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE---GPPGLPG--G 783 (978)
Q Consensus 709 ~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~---~~P~~P~--~ 783 (978)
..+.+.|...+..... ..... ..........+.|.++.....+.|++.|.|..|... +..+.+. ++|.+|. +
T Consensus 393 ~~y~v~y~~~~~~~~~-~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~~~ 469 (731)
T 2v5y_A 393 YNLTVHYCYQVGGQEQ-VREEV-SWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTES 469 (731)
T ss_dssp CEEEEEEEEESSSSEE-EEEEE-ECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCTTT
T ss_pred eeEEEEEEEccCCCCc-cceeE-EEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCcce
Confidence 2345555543210000 00000 011122346788999988888888999999999753 4334443 4555543 4
Q ss_pred eEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccC-ceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEE
Q psy12060 784 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 862 (978)
Q Consensus 784 ~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A 862 (978)
+.... ..+++.|+|.+|...+++|.+|.|+|+...... |...... ...+........+++.+ |.|++.|.|+|+|
T Consensus 470 ~~~~~-~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~-L~p~t~Y~~~V~A 545 (731)
T 2v5y_A 470 IQGST-FEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQ--SGRVSKLGNETHFLFFG-LYPGTTYSFTIRA 545 (731)
T ss_dssp CEEEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC---CCCCC--EEEEEEETTCCEEEECS-CCTTEEEEEEEEE
T ss_pred EEeee-cCCeEEEEEcCCCCCCCCccceEEEEEECcCCCccccccCc--ceEEeecCCcceEEecC-CCCCCEEEEEEEE
Confidence 55533 578999999999888889999999998765421 1100000 00111123456789999 9999999999999
Q ss_pred ecCCccCCCCCCCCCCCCCCCCCCCCCCcee-ecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccc--------
Q psy12060 863 GNELGYGEPSSPSPQYNTPADKPYQAPSRIG-GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF-------- 933 (978)
Q Consensus 863 ~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~-~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~-------- 933 (978)
.|..|.|+++.. .++|.+.+|..++.... ....+.++|.|+|.+ +.+.||+|++|+|+|+..+....
T Consensus 546 ~n~~G~g~~s~~--~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~p--p~~~~g~I~~Y~v~~~~~~~~~~~~~~~~~~ 621 (731)
T 2v5y_A 546 STAKGFGPPATN--QFTTKISAPSMPAYELETPLNQTDNTVTVMLKP--AHSRGAPVSVYQIVVEEERPRRTKKTTEILK 621 (731)
T ss_dssp EETTEEEEEEEE--EEECCCCCCCC-------------------------------------------------------
T ss_pred EeCCccCCCccc--EEEcCCCCCCCCCcccccccccCCceEEEEEeC--CCCCCCceEEEEEEEEecCCCCCcccccccc
Confidence 999999999853 67888888865554332 345677899999998 57899999999999987652210
Q ss_pred --------eeee-----------e----------eeccc-eeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 934 --------QSET-----------L----------KEYGN-VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 934 --------~~~~-----------~----------~~~~~-~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
.... . -..++ .....+.+.+|+|++.|.|+|+|++.+|.|..++
T Consensus 622 ~~~~~~~~~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~~L~p~~~Y~i~v~A~s~~g~~~~~~ 695 (731)
T 2v5y_A 622 CYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKID 695 (731)
T ss_dssp --------------------------------------------------------------------------
T ss_pred CcccccCHHHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECCCCCCCCceEEEEEEEEecCCCcEee
Confidence 0000 0 00000 0111233456999999999999999999998764
No 37
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=1.6e-36 Score=331.36 Aligned_cols=316 Identities=12% Similarity=0.145 Sum_probs=242.6
Q ss_pred eeeecccCeEEEeCCCCCCCCceEEEeccccccccc------------ccceEEEe------eCCcEEEeeeeeecceee
Q psy12060 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE------------EDKRVFVS------YDGALYFSALEQIDAGNY 366 (978)
Q Consensus 305 ~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~------------~~~~~~~~------~~~~L~i~~~~~~d~G~Y 366 (978)
..+.+|+.++|.|.+ .+.|.+.|.|+|++..+... ...|+.+. .+.+|.|.+++.+|+|.|
T Consensus 4 v~~~~G~~v~L~C~~-~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 4 VLGKKGDTVELTCTA-SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEETTSCEEECCCC-TTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred EEEeCCCeEEEEEEe-cCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 356789999999998 47889999999998642211 12344332 245799999999999999
Q ss_pred EEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCcee
Q psy12060 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446 (978)
Q Consensus 367 ~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~ 446 (978)
+|.|.|..+ .+.|.|... ..++ ...+.+|++++|.|.+.+.|.|.|+|++++..+
T Consensus 83 ~C~~~n~~~-------~~~l~V~~~------~~~~------~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~------ 137 (363)
T 1wio_A 83 ICEVEDQKE-------EVQLLVFGL------TANS------DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN------ 137 (363)
T ss_dssp EEEETTEEE-------EEEEEEEEE------EESS------CSSEESBSCEEEEEECCTTCCCCEEEECSSSCE------
T ss_pred EEEEEECCC-------cEEEEEEeC------CCCC------ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc------
Confidence 999988742 356666641 1111 135679999999999999999999999998654
Q ss_pred eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeec-----CCCCeeE
Q psy12060 447 ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG-----VPDVTYS 521 (978)
Q Consensus 447 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-----~p~~~i~ 521 (978)
......|.|.+++.+|+|.|+|.|.|..+.....+.|.|..+|... ....+.+|+.++|.|.+.+ .|.+.|+
T Consensus 138 ~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~---~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~ 214 (363)
T 1wio_A 138 IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS---SIVYKKEGEQVEFSFPLAFTVEKLTGSGELW 214 (363)
T ss_dssp EEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE---EEEEEETBCCEEEECCCCCCCCSSCEEEEEE
T ss_pred cccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC---CceEEecCCEEEEEEEEecccccCCCceeEE
Confidence 2346789999999999999999999987777777888888666543 4456789999999998877 7789999
Q ss_pred EeECCEECCCCCCCCC-CCCcEEE------------e--cCEEEEEeCCCCCCCeEEEEEEEcC--CCceeeEEEEEEEE
Q psy12060 522 WFRNGELLNSETLPLE-DQDRYFI------------Q--DNVLTIRYLNPERDPAMYQCRAKNQ--LKTRYSSAQLRVLT 584 (978)
Q Consensus 522 W~~~g~~~~~~~~~~~-~~~~~~~------------~--~~~l~i~~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~ 584 (978)
|+++|..+........ ...++.+ . ...|.|.++.. +|+|.|+|.|.|. .|.....+.|.|..
T Consensus 215 W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~ 293 (363)
T 1wio_A 215 WQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALP-QYAGSGNLTLALEAKTGKLHQEVNLVVMR 293 (363)
T ss_dssp EEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCG-GGCEEEEEEECBTTTTCCEEEEEEEEEEE
T ss_pred EecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCc-CcCcEEEEEEEEhhhcCeEEEEEeEEEEE
Confidence 9999987763100000 0223333 2 23899999986 9999999999999 89887778887763
Q ss_pred cCCccccCCCCcceeecCCCeEEEEEeeccCCCCe--eEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEe
Q psy12060 585 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 662 (978)
Q Consensus 585 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~--i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 662 (978)
. .|+++.|.|.+.+.|+|. +.|+++|..+.. .+.|.|.++..+|+|.|+|.|.|
T Consensus 294 v----------------~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~--------~~~l~i~~v~~~d~G~Y~C~a~~ 349 (363)
T 1wio_A 294 A----------------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV--------SKREKAVWVLNPEAGMWQCLLSD 349 (363)
T ss_dssp E----------------CCCSSSEEEEEESSCCTTCCEEEECSSSSCSE--------EESSSEEEESSCCSEEEEEEECS
T ss_pred e----------------cCCCeeEEEEEccccCCCccEEEEeCCCceee--------eeeeeeeeeccccceeEEEEEec
Confidence 1 288899999999999887 999999987653 34578899999999999999996
Q ss_pred CCceeeeeEEEEE
Q psy12060 663 VHGMDESKGRLIV 675 (978)
Q Consensus 663 ~~g~~~~~~~l~v 675 (978)
. |....+..+.|
T Consensus 350 ~-~~~~~~~~~~V 361 (363)
T 1wio_A 350 S-GQVLLESNIKV 361 (363)
T ss_dssp S-SSCCEEEEEEE
T ss_pred C-CeEEEecceEe
Confidence 4 55566666665
No 38
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=2.1e-36 Score=330.49 Aligned_cols=308 Identities=17% Similarity=0.199 Sum_probs=240.2
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcCccCC--------------CCcee-------eecccEEEeCCCCCCCCeEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLP--------------RNAYF-------ENFNRILTIPNVKVEDQGEYIC 468 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~--------------~~~~~-------~~~~~~L~i~~~~~~d~G~Y~C 468 (978)
.+.+|++++|.|.+.+.|.+.|.|+|++..+. ...++ ......|.|.+++.+|+|.|+|
T Consensus 5 ~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (363)
T 1wio_A 5 LGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYIC 84 (363)
T ss_dssp EEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEEE
T ss_pred EEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEEE
Confidence 35689999999999999999999999986421 11122 1135679999999999999999
Q ss_pred EEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCE
Q psy12060 469 RASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV 548 (978)
Q Consensus 469 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~ 548 (978)
.|.|.. ..+.|.|.. +...+. ..+.+|++++|.|.+.+.|.+.+.|+|+|..+ ......
T Consensus 85 ~~~n~~----~~~~l~V~~---~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-------------~~~~~~ 143 (363)
T 1wio_A 85 EVEDQK----EEVQLLVFG---LTANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------------IQGGKT 143 (363)
T ss_dssp EETTEE----EEEEEEEEE---EEESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSCE-------------EEESSE
T ss_pred EEEECC----CcEEEEEEe---CCCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc-------------cccceE
Confidence 998763 366777765 223332 46789999999999999999999999987533 235678
Q ss_pred EEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeecc-----CCCCeeEEe
Q psy12060 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-----APKPKFVWK 623 (978)
Q Consensus 549 l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-----~p~~~i~W~ 623 (978)
|.|.++.. +|+|.|+|.|.|..+.......+.|.. +|... ....+.+|+.+.|.|.+.+ .|.|.++|+
T Consensus 144 L~i~~v~~-~d~G~Y~C~a~~~~~~~~~~~~l~v~~-~p~~~-----~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~ 216 (363)
T 1wio_A 144 LSVSQLEL-QDSGTWTCTVLQNQKKVEFKIDIVVLA-FQKAS-----SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQ 216 (363)
T ss_dssp EEECSBCG-GGCEECEEEEEETTEEEEECCEECEEC-CSCSE-----EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEE
T ss_pred EEEeeCCh-hcCCEEEEEEecCCCeEEEEEEEEEec-CCCCC-----CceEEecCCEEEEEEEEecccccCCCceeEEEe
Confidence 99999996 999999999999866665556666663 23221 4455789999999998877 778899999
Q ss_pred eCCEEecC--------CCcEEEe-----------e--cCcEEEccccCCCCEEEEEEEEeC--CceeeeeEEEEEEeCCc
Q psy12060 624 KDGNIIGS--------GGRRKIF-----------E--NGNLLISPVSRDDSGIYSCTATNV--HGMDESKGRLIVLHGPS 680 (978)
Q Consensus 624 ~~g~~~~~--------~~~~~~~-----------~--~~~l~i~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~~p~ 680 (978)
++|..+.. +.++.+. . ..+|.|.++..+|+|.|+|.|.|. .|.....+.|.|...
T Consensus 217 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v-- 294 (363)
T 1wio_A 217 AERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA-- 294 (363)
T ss_dssp ESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE--
T ss_pred cCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe--
Confidence 99988765 4444442 2 237999999999999999999999 998888888888621
Q ss_pred eeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEE
Q psy12060 681 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 760 (978)
Q Consensus 681 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~ 760 (978)
.|+.+.|.|.+.+.|+|.+.+.|+++|..+.. +..|.|.++..+|+|.|+|.|.
T Consensus 295 ------------~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~--------------~~~l~i~~v~~~d~G~Y~C~a~ 348 (363)
T 1wio_A 295 ------------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV--------------SKREKAVWVLNPEAGMWQCLLS 348 (363)
T ss_dssp ------------CCCSSSEEEEEESSCCTTCCEEEECSSSSCSE--------------EESSSEEEESSCCSEEEEEEEC
T ss_pred ------------cCCCeeEEEEEccccCCCccEEEEeCCCceee--------------eeeeeeeeeccccceeEEEEEe
Confidence 28889999999999999877899999976642 3456789999999999999999
Q ss_pred cCCCceeeeEEEEE
Q psy12060 761 STVGKISTKTTVIV 774 (978)
Q Consensus 761 n~~G~~s~~~~l~v 774 (978)
|. |....+..+.|
T Consensus 349 ~~-~~~~~~~~~~V 361 (363)
T 1wio_A 349 DS-GQVLLESNIKV 361 (363)
T ss_dssp SS-SSCCEEEEEEE
T ss_pred cC-CeEEEecceEe
Confidence 64 55555555555
No 39
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=3.6e-35 Score=330.44 Aligned_cols=368 Identities=17% Similarity=0.231 Sum_probs=236.1
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecCCC----CeEEEEEcc--ccccccccc--ccCCCCCCceEee----cceEE
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPN----PSYEWFKED--YVQDRLVAN--LIDPLSDKRFTLS----GGNLI 259 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~----~~v~W~~~~--~~~~~~~~~--~~~~~~~~~~~~~----~~~l~ 259 (978)
|+..|.+..+. +|++++|.|.+.|.|. +.|.|||++ ..+..+... ........++... ..+|.
T Consensus 4 v~~~p~~~~v~-----~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 78 (438)
T 1qgc_4 4 LTQSPASLAVS-----LGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLT 78 (438)
T ss_dssp EEEECSEEEEC-----TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEE
T ss_pred eEecCCeEEee-----CCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEE
Confidence 34446666544 4667999999998887 489999974 221100000 0001122444432 24799
Q ss_pred EeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEee---ecccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccc
Q psy12060 260 INDPRQVEDRGSYHCKASNKFGSIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYF 335 (978)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~ 335 (978)
|.++ +.+|+|.|+|.|.|..|...+..+.|.|.. +|.+...........|+.++|.|.+.++.|.+ .|+|+|+|.
T Consensus 79 I~~v-~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~ 157 (438)
T 1qgc_4 79 IDPV-EADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 157 (438)
T ss_dssp ESSC-CGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred eCCC-cCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCE
Confidence 9998 899999999999998875444556666643 22222222222233567899999986557776 999999987
Q ss_pred cccccccceEEE--ee------CCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCC
Q psy12060 336 PNFVEEDKRVFV--SY------DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407 (978)
Q Consensus 336 ~~~~~~~~~~~~--~~------~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~ 407 (978)
++.......... .. .+.|.|.++..+|+|.|+|.|.|..+.. .+.+.+........+..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~-----~~~~~~~~~~~~~~~~~~~------ 226 (438)
T 1qgc_4 158 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS-----PIVKSFNRNECEVMLVESG------ 226 (438)
T ss_dssp EECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS-----CEEEEEETTC-CCEEEEEC------
T ss_pred EcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC-----ceecccccccceeEEecCC------
Confidence 753220000111 11 2469999999999999999999976532 2344443221111111111
Q ss_pred CCCCCCCCcEEEEEEEeecC--CCeeEEEEc--CccCCC-----------------Cceee------ecccEEEeCCCCC
Q psy12060 408 PEAPKAGDKVRLECVAFGYP--VPSYNWTRR--GSPLPR-----------------NAYFE------NFNRILTIPNVKV 460 (978)
Q Consensus 408 ~~~v~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~l~~-----------------~~~~~------~~~~~L~i~~~~~ 460 (978)
...+.+|++++|.|.+.|.| .+.|.|+|+ +..+.. ..++. .....|.|.+++.
T Consensus 227 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 306 (438)
T 1qgc_4 227 GGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRS 306 (438)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred ceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCCh
Confidence 23578999999999999988 679999997 443310 11111 1134899999999
Q ss_pred CCCeEEEEEEEeCCC-----ceEEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEEC
Q psy12060 461 EDQGEYICRASNDRS-----ALESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELL 529 (978)
Q Consensus 461 ~d~G~Y~C~a~n~~g-----~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~ 529 (978)
+|+|.|+|.|.|..+ .....+.|.|. .+|.+...+....+.+|++++|.|.+.|. |.+ .|.|+++|..+
T Consensus 307 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~ 386 (438)
T 1qgc_4 307 ADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSS 386 (438)
T ss_dssp GGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCS
T ss_pred hhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCC
Confidence 999999999998543 22234567776 35555544444567789999999999987 877 99999999876
Q ss_pred CCCCCCC-CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEE
Q psy12060 530 NSETLPL-EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 579 (978)
Q Consensus 530 ~~~~~~~-~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 579 (978)
....... ...+.+ .....|.|..+.. +| |.|+|.|.|..|.......
T Consensus 387 ~~~~~~~~~~~g~~-~~~s~L~i~~~~~-~d-g~Y~C~a~n~~g~~~~~~~ 434 (438)
T 1qgc_4 387 GVHTFPAVLQSDLY-TLSSSVTVPSSTW-PS-ETVTCNVAHPASSTKVDKK 434 (438)
T ss_dssp SEEECCCEEETTEE-EEEEEEEEEEEHH-HH-SCCEEEEEEGGGTEEEEEE
T ss_pred ceeecCccccCCcE-EEEEEEEEehhhc-CC-ceEEEEEEeCCCCcceeee
Confidence 5211000 011222 2234688988875 68 9999999999887654443
No 40
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=2.3e-34 Score=323.93 Aligned_cols=356 Identities=16% Similarity=0.236 Sum_probs=237.7
Q ss_pred CCCCCCcEEEEEEEeecCC----CeeEEEEcC--ccCC------------CCceee----ecccEEEeCCCCCCCCeEEE
Q psy12060 410 APKAGDKVRLECVAFGYPV----PSYNWTRRG--SPLP------------RNAYFE----NFNRILTIPNVKVEDQGEYI 467 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~----~~v~W~~~~--~~l~------------~~~~~~----~~~~~L~i~~~~~~d~G~Y~ 467 (978)
.+.+|++++|.|.+.+.|. +.|.|+|++ ..+. ...++. .....|.|.+++.+|+|.|+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 91 (438)
T 1qgc_4 12 AVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVATYY 91 (438)
T ss_dssp EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred EeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCeeEE
Confidence 4679999999999988776 489999974 2220 011111 12357999999999999999
Q ss_pred EEEEeCCCce-EEEEEEEEEe---eceeeccCCcccccCCCceeEEEEeec-CCCC-eeEEeECCEECCCCC----CCCC
Q psy12060 468 CRASNDRSAL-ESSVTISIQA---EPNFTIPLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELLNSET----LPLE 537 (978)
Q Consensus 468 C~a~n~~g~~-~~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~~~~~~~----~~~~ 537 (978)
|.|.|..+.. ...+.|.|.. +|.+...+......+|+.++|.|.+.+ .|.+ .|+|+|+|..+.... ....
T Consensus 92 C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 171 (438)
T 1qgc_4 92 CQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQD 171 (438)
T ss_dssp EEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCC
T ss_pred EEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceecccccc
Confidence 9999987642 3345666653 666665444344557889999999987 5766 999999999886430 0000
Q ss_pred CCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCC-
Q psy12060 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP- 616 (978)
Q Consensus 538 ~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p- 616 (978)
..+........|.|..+.. +|+|.|+|.|.|..+....... +....+.+... .+....+.+|+.++|.|.+.|.|
T Consensus 172 ~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~~g~p~ 247 (438)
T 1qgc_4 172 SKDSTYSMSSTLTLTKDEY-ERHNSYTCEATHKTSTSPIVKS--FNRNECEVMLV-ESGGGLVKPGGSLKLSCTASGFIF 247 (438)
T ss_dssp TTTCCEEEEEEEEEEHHHH-HTCCEEEEEEEETTCSSCEEEE--EETTC-CCEEE-EECCEEECTTCCEEEEEEEESSCG
T ss_pred CCCCcEEEEEEEEEeCccc-CCCCeEEEEEEecccCCceecc--cccccceeEEe-cCCceEEecCCcEEEEEEEccccc
Confidence 1112222345799999986 8999999999998876533222 22111111111 12344588999999999999988
Q ss_pred -CCeeEEeeC--CEEec-----------------CCCcEEEeec-----CcEEEccccCCCCEEEEEEEEeCCc-----e
Q psy12060 617 -KPKFVWKKD--GNIIG-----------------SGGRRKIFEN-----GNLLISPVSRDDSGIYSCTATNVHG-----M 666 (978)
Q Consensus 617 -~~~i~W~~~--g~~~~-----------------~~~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~a~n~~g-----~ 666 (978)
.+.+.|+|+ |..+. ...++.+..+ .+|.|.+++.+|+|.|+|.|.|..+ .
T Consensus 248 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~ 327 (438)
T 1qgc_4 248 NRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAY 327 (438)
T ss_dssp GGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCS
T ss_pred CCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCcccee
Confidence 679999986 54331 1245554432 2699999999999999999999544 2
Q ss_pred eeeeEEEEEEe----CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccc-cCCeeecCCce
Q psy12060 667 DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGL 741 (978)
Q Consensus 667 ~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~-~~~~~~~~~~~ 741 (978)
......|.|.. +|.+... ++...+..|+.++|.|.+.+..+..+.+.|+++|..+........ ....+. -.+.
T Consensus 328 ~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~-~~s~ 405 (438)
T 1qgc_4 328 WGQGTVVTVSAAKTTPPSVYPL-APGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT-LSSS 405 (438)
T ss_dssp BCCCEEEEECSSCCBCCEEEEE-CCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEE-EEEE
T ss_pred eCCCEEEEEecCCCCCCeEEEc-CcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcEE-EEEE
Confidence 22345667653 3333322 223345679999999999987333467899999987653210000 000111 1136
Q ss_pred EEEeccCCCCCEEEEEEEEcCCCceeeeEEE
Q psy12060 742 LEITNASFADAGEYECVVKSTVGKISTKTTV 772 (978)
Q Consensus 742 l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l 772 (978)
|.|.++..+| |.|+|.|.|..|.......+
T Consensus 406 L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 406 VTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp EEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 8898888888 99999999999986655544
No 41
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=4.3e-32 Score=285.58 Aligned_cols=259 Identities=24% Similarity=0.431 Sum_probs=217.3
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceee----ecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 484 (978)
..+.+|+.++|.|.+.|.|.+.|+|+|++..+....... .....|.|.+++.+|+|.|+|.|.|..|..+..+.|.
T Consensus 15 ~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~ 94 (284)
T 2rik_A 15 VDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLG 94 (284)
T ss_dssp EEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEE
Confidence 356799999999999999999999999999987654322 2357899999999999999999999999988999999
Q ss_pred EEeeceeeccCC-cccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE--ecCEEEEEeCCCCCCCe
Q psy12060 485 IQAEPNFTIPLT-DKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPA 561 (978)
Q Consensus 485 V~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G 561 (978)
|..+|.+...+. ...+.+|+.+.|.|.+.|.|.+.+.|++++..+... ...+... ....|.|.++.. +|+|
T Consensus 95 V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~~L~i~~~~~-~d~G 168 (284)
T 2rik_A 95 VQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES-----SKFRMSFVESVAVLEMYNLSV-EDSG 168 (284)
T ss_dssp EECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCS-----SSEEEEEETTEEEEEECSCCG-GGCE
T ss_pred ccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCC-----CcEEEEEcCCEEEEEECCCCc-ccCE
Confidence 999998766443 445789999999999999999999999999988732 1111112 234789999986 8999
Q ss_pred EEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecC
Q psy12060 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641 (978)
Q Consensus 562 ~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~ 641 (978)
.|+|.|.|..|.......|.|.. +|.+...+ ....+..|+.++|.|.+.|.|.+.+.|+++|..+..+.++.+...+
T Consensus 169 ~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~ 245 (284)
T 2rik_A 169 DYTCEAHNAAGSASSSTSLKVKE-PPVFRKKP--HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSEN 245 (284)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEC-CCBCCSCC--CCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEET
T ss_pred EEEEEEEcCCCceeEEEEEEEec-CCcceeCC--CcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcC
Confidence 99999999999888888888874 66665544 3455789999999999999999999999999999888777766554
Q ss_pred ---cEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 642 ---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 642 ---~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
.|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 246 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 246 FLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 59999999999999999999999999988888774
No 42
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=7.7e-33 Score=292.55 Aligned_cols=276 Identities=20% Similarity=0.322 Sum_probs=214.2
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCC-CCeEEEEE-cccccccccccccCCCCCCceEe-----ecceEEEe
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-NPSYEWFK-EDYVQDRLVANLIDPLSDKRFTL-----SGGNLIIN 261 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p-~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~i~ 261 (978)
+|.|...|.+..+.. |+.++|.|.+.|.| .+.|.|+| +|..+.. ...++.. ..++|.|.
T Consensus 2 ~~~v~~~p~~~~v~~-----G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~---------~~~~~~~~~~~~~~~~L~i~ 67 (291)
T 1qz1_A 2 VLQVDIVPSQGEISV-----GESKFFLCQVAGDAKDKDISWFSPNGEKLSP---------NQQRISVVWNDDDSSTLTIY 67 (291)
T ss_dssp CCCEEEESSSEEEET-----TCCEEEEEEESSCCSCCEEEEECTTSCBCCS---------SCSSEEEEEEETTEEEEEEC
T ss_pred CcceEecCCCceEeC-----CCeEEEEEEeCCCCCCcEeEEECCCCeECcc---------CCceEEEEEcCCCeEEEEEe
Confidence 567788888877644 56699999999987 68999999 6654321 1223222 24589999
Q ss_pred CCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccc
Q psy12060 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (978)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~ 341 (978)
++ +.+|+|.|+|.|.|..|...+..+.|.|..++.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+|++..+....
T Consensus 68 ~~-~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~ 145 (291)
T 1qz1_A 68 NA-NIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKK 145 (291)
T ss_dssp SC-CGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEE-ECSSCCEEEEEETTSCSSTTC
T ss_pred cC-CCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEe-ccCCCCEEEEEECCEEcccCC
Confidence 97 8999999999999999876677888888777666666667778899999999998 567889999999998876666
Q ss_pred cceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEE
Q psy12060 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLEC 421 (978)
Q Consensus 342 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C 421 (978)
..++....++.|.|.+++.+|+|.|+|.|.|..+... ....+.|.|..+|....... .....+.+|+.++|.|
T Consensus 146 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~-~~~~~~l~v~~~p~~~~~~~------~~~~~~~~g~~v~l~C 218 (291)
T 1qz1_A 146 DVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEI-NFKDIQVIVNVPPTVQARQS------IVNATANLGQSVTLVC 218 (291)
T ss_dssp CTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEE-EEEEEEEEEEEEEEEEESCS------EEEEETTSCCCEEEEE
T ss_pred CceEEEccCCcEEEccCccccCeEEEEEEEecCCCce-eeEEEEEEEecCCccccccc------ccccccccCceEEEEE
Confidence 6677777788999999999999999999998764321 22235666665543321110 1123567999999999
Q ss_pred EEeecCCCeeEEEEcCccCCCCc----ee--eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEe
Q psy12060 422 VAFGYPVPSYNWTRRGSPLPRNA----YF--ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487 (978)
Q Consensus 422 ~~~g~p~~~v~W~~~~~~l~~~~----~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 487 (978)
.+.|.|.|.|.|++++..+.... +. ......|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 219 ~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 219 DADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp EEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 99999999999999999987653 22 23356899999999999999999999999999999998874
No 43
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.7e-33 Score=293.42 Aligned_cols=279 Identities=21% Similarity=0.363 Sum_probs=199.2
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceE-eec---ceEEEeCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFT-LSG---GNLIINDP 263 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~l~i~~~ 263 (978)
.+|.|...|.+..+.+ |+.++|.|.+.|.|.+.|.|+|+|..+.. ...+.. ..+ ..|.|.++
T Consensus 5 ~~P~~~~~p~~~~v~~-----G~~v~l~C~~~g~p~~~i~W~k~g~~i~~---------~~~~~~~~~~~~~~~L~i~~~ 70 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVS-----GGVASFVCQATGDPKPRVTWNKKGKKVNS---------QRFETIEFDESAGAVLRIQPL 70 (304)
T ss_dssp CCCEEEECCCCEEEET-----TSCEEEEEEEECSSCCEEEEC-------C---------TTEEEEEETTTTEEEEEECSC
T ss_pred cCCeeeecCCceEecC-----CCeEEEEEEEEEeCCCeEEEEECCEECCC---------CceEEEEecCCCceEEEEecc
Confidence 4689999999887654 56699999999999999999999976521 111111 122 46889887
Q ss_pred CCC-CCCeEEEEEEEeCceeEEeEEEEEEEeeec-------ccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccc
Q psy12060 264 RQV-EDRGSYHCKASNKFGSIISESVQLAFGFIG-------EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF 335 (978)
Q Consensus 264 ~~~-~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~-------~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~ 335 (978)
+. +|+|.|+|.|.|..|. .+..+.|.|...+ .+...+....+..|+.++|.|.+ .|.|.+.|+|+|++.
T Consensus 71 -~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~-~g~p~~~v~W~k~~~ 147 (304)
T 2yd9_A 71 -RTPRDENVYECVAQNSVGE-ITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAA-SGNPDPEITWFKDFL 147 (304)
T ss_dssp -CTTTTCSEEEEEEECSSCE-ECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEE-ECSSCCEEEEEETTE
T ss_pred -cccCCCeEEEEEEECCCCe-EEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEEC-ccCCCCeEEEEECCE
Confidence 76 9999999999999987 4667888887653 22333445567789999999998 678999999999997
Q ss_pred cccccc-cceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCC
Q psy12060 336 PNFVEE-DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG 414 (978)
Q Consensus 336 ~~~~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G 414 (978)
++.... ..++....++.|.|.+++.+|+|.|+|.|.|..+...... ..|.|......+.+...+ ....+.+|
T Consensus 148 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~--~~l~v~~~~~~P~~~~~~-----~~~~v~~G 220 (304)
T 2yd9_A 148 PVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSP--ANLYVRVQNVAPRFSILP-----MSHEIMPG 220 (304)
T ss_dssp ECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCC--EEEEEECCCEEEEEEECC-----CCBCCCTT
T ss_pred ECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEecc--EEEEEEeeccCCcEEecC-----CceEEcCC
Confidence 754332 2355566678999999999999999999999876433222 344443221112222111 12457899
Q ss_pred CcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceee
Q psy12060 415 DKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFT 492 (978)
Q Consensus 415 ~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 492 (978)
+.++|.|.+.|.|.|.|+|++++..+............|.|.++ +|+|.|+|.|.|..|..+.++.|.|..++.+.
T Consensus 221 ~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 296 (304)
T 2yd9_A 221 GNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKAG 296 (304)
T ss_dssp CCEEEEEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC--------
T ss_pred CeEEEEEEEeeeCCCEEEEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCcccc
Confidence 99999999999999999999999999776555445556888876 59999999999999999999999999877653
No 44
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=9.5e-32 Score=284.16 Aligned_cols=276 Identities=21% Similarity=0.317 Sum_probs=211.5
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEE-cccccccccccccCCCCCCceEee----cceEEEeCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTLS----GGNLIINDP 263 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~ 263 (978)
+|.|+..|.+..+.. |+.++|.|.+.|.|. .+.|+| +|..+. ...++... ..+|.|.++
T Consensus 4 ~p~v~~~~~~~~v~~-----G~~v~l~C~~~~~p~-~v~W~~~~g~~~~----------~~~~~~~~~~~~~~~L~i~~~ 67 (291)
T 2wim_A 4 LLQVTISLSKVELSV-----GESKFFTCTAIGEPE-SIDWYNPQGEKII----------STQRVVVQKEGVRSRLTIYNA 67 (291)
T ss_dssp CCEEEESCSEEEEET-----TCCEEEEEEEESCCS-EEECBCTTCCBCC----------CBTTEEEEEETTEEEEEECSC
T ss_pred CceEEEeccceEecC-----CCcEEEEEEEeCCCC-ceEEECCCCcCcc----------CCCcEEEecCCCEEEEEEccC
Confidence 478888888877654 566999999999885 999999 554332 11222221 237999987
Q ss_pred CCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccc
Q psy12060 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (978)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 343 (978)
+.+|+|.|+|.|.|..|...+..+.|.|..++.+........+..|+.+.|.|.+ .+.|.+.+.|++++..+......
T Consensus 68 -~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~ 145 (291)
T 2wim_A 68 -NIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDN 145 (291)
T ss_dssp -CGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCC-BCSSCCEEEEECC----CBCCCS
T ss_pred -CcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEE-ccCCCCEEEEEECCccccccCCc
Confidence 8999999999999999987777888888777776666677788899999999998 57788999999999876655667
Q ss_pred eEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEE
Q psy12060 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423 (978)
Q Consensus 344 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~ 423 (978)
++.+..+++|.|.+++.+|+|.|+|.+.|..+... ....+.|.|..+|..... . ......+.+|+.++|.|.+
T Consensus 146 ~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~-~~~~~~~~v~~~p~~~~~---~---~~~~~~~~~g~~~~l~C~~ 218 (291)
T 2wim_A 146 RFAMLANNNLQILNINKSDEGIYRCEGRVEARGEI-DFRDIIVIVNVPPAISMP---Q---KSFNATAERGEEMTFSCRA 218 (291)
T ss_dssp SEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEE-EEEEEEEEEEBCCCCBCS---C---SEEECCSSSCCEEEEECBC
T ss_pred eEEEccCCCEEEEecchhhCEEEEEEEEECCCCee-EEeeEEEEeccCCccccC---c---ccccceecCCCeEEEEEEe
Confidence 77777888999999999999999999998764322 222356777665543211 1 1112356799999999999
Q ss_pred eecCCCeeEEEEcCccCCCCceee--ecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeec
Q psy12060 424 FGYPVPSYNWTRRGSPLPRNAYFE--NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489 (978)
Q Consensus 424 ~g~p~~~v~W~~~~~~l~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 489 (978)
.|.|.|.|+|++++..+....... ..+..|.|.++..+|+|.|+|.|.|..|..+.++.|.|..++
T Consensus 219 ~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 219 SGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp CCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred ecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 999999999999999987655432 345789999999999999999999999999999999998765
No 45
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=2.4e-32 Score=307.17 Aligned_cols=352 Identities=14% Similarity=0.182 Sum_probs=220.9
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEcc--cccccccc-------cccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~--~~~~~~~~-------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.|.+ .+.|.|||++ ..+..+.. .........|+.+. +.+|.|.++ +.+|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~ 91 (444)
T 1igt_B 13 QPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL-KSEDT 91 (444)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC-CGGGC
T ss_pred cCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC-CHHHC
Confidence 3577799999998875 5789999974 22111100 00111123455542 348999998 89999
Q ss_pred eEEEEEEEeCcee--EEeEEEEEEEee----ecccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEeccccccccccc
Q psy12060 270 GSYHCKASNKFGS--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEED 342 (978)
Q Consensus 270 G~Y~C~a~n~~g~--~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~~~ 342 (978)
|.|+|.|.|..+. ..+..+.|.|.. +|.+....+...+..|+.++|.|.+.++.|.+ .|+|+|++..+.....
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~ 171 (444)
T 1igt_B 92 AMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF 171 (444)
T ss_dssp EEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEC
T ss_pred EEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEec
Confidence 9999999997654 233456676652 22222112222346788999999986555776 9999999876321111
Q ss_pred ceEE----EeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEc------------------cCCCccccccC
Q psy12060 343 KRVF----VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF------------------PHSNFQQLKFP 400 (978)
Q Consensus 343 ~~~~----~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~------------------~~~~~~~~~~~ 400 (978)
.... ....+.|.|.++..+| |.|+|.|.|..+..... ..+.+. .+|.+ . ..+
T Consensus 172 ~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~p~v-~-~~~ 245 (444)
T 1igt_B 172 PAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD---KKIEPRGPTIKPCPPCKCPAPNLLGGPSV-F-IFP 245 (444)
T ss_dssp CCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEE---EECCCCCCSCCCCCCCSCCCSCCCCCCEE-E-EEC
T ss_pred CccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceE---EEeccCCCCcccCCccccCCcccCCCceE-E-ecC
Confidence 1111 1112468899999899 99999999987642111 111110 01100 0 111
Q ss_pred CCCCCCCCCC-CCCCCcEEEEEEEeecC----CCeeEEEEcCccCCCCcee---e------ecccEEEeCCCCCCCCeEE
Q psy12060 401 NNFPKTFPEA-PKAGDKVRLECVAFGYP----VPSYNWTRRGSPLPRNAYF---E------NFNRILTIPNVKVEDQGEY 466 (978)
Q Consensus 401 ~~~~~~~~~~-v~~G~~~~l~C~~~g~p----~~~v~W~~~~~~l~~~~~~---~------~~~~~L~i~~~~~~d~G~Y 466 (978)
+. ... +.+|++++|.|.+.|.| .+.|+|+|++..+...... . ...+.|.|.++..+|+|.|
T Consensus 246 p~-----~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y 320 (444)
T 1igt_B 246 PK-----IKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEF 320 (444)
T ss_dssp CC-----HHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEE
T ss_pred Cc-----hhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcE
Confidence 11 111 47899999999999874 3599999999887543211 0 1235799999999999999
Q ss_pred EEEEEeCCCce--EEEEEE--EEEeeceeeccCCcc-cccCCCceeEEEEeecC-CCC-eeEEeECCEECCCCCCCCC--
Q psy12060 467 ICRASNDRSAL--ESSVTI--SIQAEPNFTIPLTDK-HMDNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSETLPLE-- 537 (978)
Q Consensus 467 ~C~a~n~~g~~--~~~~~l--~V~~~p~~~~~~~~~-~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~~~~~~~~~-- 537 (978)
+|.|.|..+.. ...+.+ .+..+|.+.+.+... .+..| .++|.|.+.|. |.+ .|+|+|+|..+........
T Consensus 321 ~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 399 (444)
T 1igt_B 321 KCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVL 399 (444)
T ss_dssp EEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEE
T ss_pred EEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEECCEEcccccccccee
Confidence 99999998865 344433 455678776544333 34444 59999999984 555 9999999998853211000
Q ss_pred CCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCC
Q psy12060 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 572 (978)
Q Consensus 538 ~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g 572 (978)
..+........|.|..... +|.|.|+|.|.|...
T Consensus 400 ~~~g~~~~~s~l~i~~~~~-~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 400 DSDGSYFMYSKLRVEKKNW-VERNSYSCSVVHEGL 433 (444)
T ss_dssp CTTSCEEEEEEEEEEHHHH-HTCCCEEEEEECTTS
T ss_pred CCCCCEEEEEEEEEChHHh-cCCCeEEEEEECCCc
Confidence 1111111223566665553 679999999999754
No 46
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=9.1e-31 Score=275.41 Aligned_cols=273 Identities=22% Similarity=0.349 Sum_probs=221.7
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEe--cCEEEEEeCCCCCCCeEEE
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ--DNVLTIRYLNPERDPAMYQ 564 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~~d~G~Y~ 564 (978)
.+|.+...+....+.+|++++|.|.+.+.|.+.++|+|+|..+... ...+.... ...|.|.++.. +|+|.|+
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~ 77 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPG-----GNYKMTLVENTATLTVLKVTK-GDAGQYT 77 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSS-----SSEEEEEETTEEEEEESSCCG-GGCEEEE
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCC-----CcEEEEEcCCEEEEEEecCCc-ccCEEEE
Confidence 5788888888888999999999999999999999999999988632 11112222 35799999986 9999999
Q ss_pred EEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEee---cC
Q psy12060 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NG 641 (978)
Q Consensus 565 C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~---~~ 641 (978)
|.+.|..|.......|.|.. +|.+...+ .....+..|+.+.|.|.+.+.|.+.+.|++++..+....+..+.. ..
T Consensus 78 C~~~n~~g~~~~~~~l~V~~-~p~~~~~~-~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 155 (284)
T 2rik_A 78 CYASNVAGKDSCSAQLGVQE-PPRFIKKL-EPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVA 155 (284)
T ss_dssp EEEEETTEEEEEEEEEEEEC-CCEEEECC-CSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEE
T ss_pred EEEEECCceEEEEEEEEccC-CCcccccC-CCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEE
Confidence 99999988887788888874 56554433 234457899999999999999999999999999988776655432 23
Q ss_pred cEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEE
Q psy12060 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 721 (978)
Q Consensus 642 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~ 721 (978)
.|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|+++|..
T Consensus 156 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~~--~v~W~~~~~~ 232 (284)
T 2rik_A 156 VLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRK-KPHPVETLKGADVHLECELQGTPPF--QVSWHKDKRE 232 (284)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCS-CCCCEEECTTCCEEEEEECBSSSCC--EEEEEETTEE
T ss_pred EEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCccee-CCCcceecCCCeEEEEEEEEecCCC--EEEEEECCEE
Confidence 599999999999999999999999999999999988776553 3556778899999999999998765 5699999998
Q ss_pred ccccccccccCCeeecC--CceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEc
Q psy12060 722 IGNMDLNELETPNINID--GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775 (978)
Q Consensus 722 ~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~ 775 (978)
+..... ..+..+ ...|.|.++..+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 233 ~~~~~~-----~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 233 LRSGKK-----YKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp ECBTTT-----EEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CcCCCC-----EEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 865321 112222 2589999999999999999999999999999998885
No 47
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=1.7e-32 Score=308.43 Aligned_cols=348 Identities=16% Similarity=0.234 Sum_probs=226.3
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC-----------------CCceeee------cccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP-----------------RNAYFEN------FNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~-----------------~~~~~~~------~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.+ .+.|.|+|++ ..+. ...++.. ....|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (444)
T 1igt_B 11 LVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSED 90 (444)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHHH
Confidence 567999999999998764 5689999863 2210 0111111 13589999999999
Q ss_pred CeEEEEEEEeCCCce---EEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEECCCCC
Q psy12060 463 QGEYICRASNDRSAL---ESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSET 533 (978)
Q Consensus 463 ~G~Y~C~a~n~~g~~---~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~~~~~ 533 (978)
+|.|+|.|.|..+.. ...+.|.|.. +|.+........+.+|+.++|.|.+.|. |.+ .|.|+|++..+....
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 170 (444)
T 1igt_B 91 TAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT 170 (444)
T ss_dssp CEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred CEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEe
Confidence 999999999976542 2345777763 4555432323346899999999999985 765 999999987642110
Q ss_pred CCC-CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEE---------------E--cCCccccCCCC
Q psy12060 534 LPL-EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL---------------T--LKPSFKKRPLE 595 (978)
Q Consensus 534 ~~~-~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~---------------~--~~p~~~~~~~~ 595 (978)
... .....+ ...+.|.|..+.. +| |.|+|.|.|..+.......+.+. . .+|.+...+..
T Consensus 171 ~~~~~~~~~~-~~~s~L~i~~~~~-~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~ 247 (444)
T 1igt_B 171 FPAVLQSDLY-TLSSSVTVTSSTW-PS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPK 247 (444)
T ss_dssp CCCEEETTEE-EEEEEEEECSTTT-TT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCC
T ss_pred cCccccCCcE-EEEEEEEEchhhc-CC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCc
Confidence 000 011222 2235788888875 78 99999999998876444443221 0 12333122211
Q ss_pred cceeecCCCeEEEEEeeccCC----CCeeEEeeCCEEecCCCc--EEE------eecCcEEEccccCCCCEEEEEEEEeC
Q psy12060 596 SETYAGEGGNVTIFCNPEAAP----KPKFVWKKDGNIIGSGGR--RKI------FENGNLLISPVSRDDSGIYSCTATNV 663 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p----~~~i~W~~~g~~~~~~~~--~~~------~~~~~l~i~~~~~~d~G~Y~C~a~n~ 663 (978)
....+..|++++|.|.+.|.+ .+.|+|+++|..+..... ... ...++|.|.++..+|+|.|+|.|.|.
T Consensus 248 ~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~ 327 (444)
T 1igt_B 248 IKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNK 327 (444)
T ss_dssp HHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECT
T ss_pred hhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcC
Confidence 111147899999999999874 359999999988764321 111 12346999999999999999999999
Q ss_pred CceeeeeEEE----EEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCC
Q psy12060 664 HGMDESKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 739 (978)
Q Consensus 664 ~g~~~~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~ 739 (978)
.|.......+ .+..+|.+....+....+..| .++|.|.+.+.+++.+.+.|+++|..+..... .......++
T Consensus 328 ~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~---~~~~~~~~g 403 (444)
T 1igt_B 328 DLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTNNGKTELNYKN---TEPVLDSDG 403 (444)
T ss_dssp TCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEETTEECSSEEE---CCCEECTTS
T ss_pred CCCCceEEEEeccCCCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEECCEEcccccc---ccceeCCCC
Confidence 8876433333 233455544333332223344 49999999997666678899999998743210 001011111
Q ss_pred -----ceEEEeccCCCCCEEEEEEEEcCCC
Q psy12060 740 -----GLLEITNASFADAGEYECVVKSTVG 764 (978)
Q Consensus 740 -----~~l~i~~~~~~d~g~Y~c~a~n~~G 764 (978)
+.|.|.....+|.|.|+|.|.|..-
T Consensus 404 ~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 404 SYFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp CEEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred CEEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 2456666666789999999999754
No 48
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.98 E-value=5.9e-31 Score=280.14 Aligned_cols=281 Identities=25% Similarity=0.349 Sum_probs=227.3
Q ss_pred CCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCC-CcEEEe--ecC--cEEEccccCCCCEEEEEEE
Q psy12060 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIF--ENG--NLLISPVSRDDSGIYSCTA 660 (978)
Q Consensus 586 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~-~~~~~~--~~~--~l~i~~~~~~d~G~Y~C~a 660 (978)
+|.+...+ ....+.+|++++|.|.+.+.|.+.+.|+++|..+... .++.+. .++ .|.|.+++.+|+|.|+|.|
T Consensus 4 ~P~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 4 APHFKEEL--RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCEEEECC--CCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCeeeecc--cceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 45555544 3466889999999999999999999999999988754 344432 233 6999999999999999999
Q ss_pred EeCCceeeeeEEEEEEeCCceee----eCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeee
Q psy12060 661 TNVHGMDESKGRLIVLHGPSYYE----QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736 (978)
Q Consensus 661 ~n~~g~~~~~~~l~v~~~p~~~~----~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~ 736 (978)
.|..|.....+.|.|..+|.+.. ..+..+.+..|+.+.|.|.+.+.|.+ .+.|++++..+..... ..+.
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~-----~~~~ 154 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDP--VITWQKGQDLIDNNGH-----YQVI 154 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCC--EEEEEESSSBCCSSSS-----CEEE
T ss_pred EcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCC--EEEEEECCEECCCCCc-----EEEE
Confidence 99999988888888876654321 11245678899999999999999876 5689999987754221 1111
Q ss_pred --cCCceEEEec-cCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCCCceEEEEeeCCeeEEEeecCC-CCCCCceeEE
Q psy12060 737 --IDGGLLEITN-ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYK 812 (978)
Q Consensus 737 --~~~~~l~i~~-~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~-~~~~~i~~Y~ 812 (978)
.....|.|.+ +...|+|.|+|.|.|..|..+.++.|.|..+|.+|.++.+.....+++.|+|.+|. +++.+++.|.
T Consensus 155 ~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~ 234 (305)
T 2nzi_A 155 VTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYI 234 (305)
T ss_dssp ECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEE
T ss_pred EcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEE
Confidence 2346899999 99999999999999999999999999999999999999998899999999999875 4566899999
Q ss_pred EEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCC
Q psy12060 813 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886 (978)
Q Consensus 813 v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~ 886 (978)
++++......|...... ....+++.+ |.+++.|.|+|.|.|..|.|++|..+..++++++.|.
T Consensus 235 v~~~~~~~~~w~~~~~~----------~~~~~~i~~-l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~~~~p~ 297 (305)
T 2nzi_A 235 VEKCATTAERWLRVGQA----------RETRYTVIN-LFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKTR 297 (305)
T ss_dssp EEEEETTSCCEEEEEEE----------SSSEEEECS-CCSSCEEEEEEEEEETTEECCCCCCCCCEECCC----
T ss_pred EEEecCCCCccEECccc----------cCceEEecC-CCCCCeEEEEEEEEeCCcccCCcCCCCCEEcCCcccc
Confidence 99999888899876442 245678999 9999999999999999999999998877777665553
No 49
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.98 E-value=4.8e-31 Score=278.78 Aligned_cols=261 Identities=23% Similarity=0.410 Sum_probs=209.2
Q ss_pred CCCCCCcEEEEEEEeecC-CCeeEEEE-cCccCCCCc-ee-----eecccEEEeCCCCCCCCeEEEEEEEeCCCc-eEEE
Q psy12060 410 APKAGDKVRLECVAFGYP-VPSYNWTR-RGSPLPRNA-YF-----ENFNRILTIPNVKVEDQGEYICRASNDRSA-LESS 480 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p-~~~v~W~~-~~~~l~~~~-~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~ 480 (978)
.+.+|++++|.|.+.+.| .+.|+|++ +|..+.... +. ......|.|.+++.+|+|.|+|.|.|..|. .+..
T Consensus 13 ~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~ 92 (291)
T 1qz1_A 13 EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEAT 92 (291)
T ss_dssp EEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEE
T ss_pred eEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEE
Confidence 467999999999999876 68999999 777775432 21 123568999999999999999999998854 5678
Q ss_pred EEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcE-EEecCEEEEEeCCCCCC
Q psy12060 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERD 559 (978)
Q Consensus 481 ~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~~d 559 (978)
+.|.|..+|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+... ...++ ...++.|.|.++.. +|
T Consensus 93 ~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~L~i~~~~~-~d 166 (291)
T 1qz1_A 93 VNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILK-----KDVRFIVLSNNYLQIRGIKK-TD 166 (291)
T ss_dssp EEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTT-----CCTTEEECTTSCEEETTCCG-GG
T ss_pred EEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccC-----CCceEEEccCCcEEEccCcc-cc
Confidence 8899999998888888888999999999999999999999999999877532 22233 23456899999986 99
Q ss_pred CeEEEEEEEcCCCcee--eEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCC----
Q psy12060 560 PAMYQCRAKNQLKTRY--SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---- 633 (978)
Q Consensus 560 ~G~Y~C~a~n~~g~~~--~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~---- 633 (978)
+|.|+|.|.|..+... ....+.|. .+|.+..........+..|+.++|.|.+.|.|.|.+.|+++|..+....
T Consensus 167 ~G~Y~C~a~n~~~~~~~~~~~~l~v~-~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~ 245 (291)
T 1qz1_A 167 EGTYRCEGRILARGEINFKDIQVIVN-VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDE 245 (291)
T ss_dssp CEEEEEEEEEGGGTEEEEEEEEEEEE-EEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCS
T ss_pred CeEEEEEEEecCCCceeeEEEEEEEe-cCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCc
Confidence 9999999998764433 33455554 3566555444445567899999999999999999999999999987654
Q ss_pred cEEEeec-CcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEe
Q psy12060 634 RRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677 (978)
Q Consensus 634 ~~~~~~~-~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 677 (978)
+...... ..|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 246 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 246 KHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp SEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 4444433 3599999999999999999999999998888888863
No 50
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.98 E-value=2.4e-31 Score=282.68 Aligned_cols=261 Identities=25% Similarity=0.447 Sum_probs=197.8
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceee----e-cccEEEeCCCCC-CCCeEEEEEEEeCCCceEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE----N-FNRILTIPNVKV-EDQGEYICRASNDRSALESSVT 482 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~----~-~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~ 482 (978)
..+.+|++++|.|.+.|.|.+.|+|+|++..+....... . ....|.|.+++. +|+|.|+|.|.|..|..+..+.
T Consensus 16 ~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 95 (304)
T 2yd9_A 16 QIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAK 95 (304)
T ss_dssp EEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEE
T ss_pred eEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEE
Confidence 356799999999999999999999999999886543321 1 126799999998 9999999999999999888899
Q ss_pred EEEEee-------ceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcE-EEecCEEEEEeC
Q psy12060 483 ISIQAE-------PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYL 554 (978)
Q Consensus 483 l~V~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~-~~~~~~l~i~~~ 554 (978)
|.|..+ |.+...+....+.+|++++|.|.+.|.|.+.+.|+|+|..+.... ...++ ....+.|.|.++
T Consensus 96 l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~----~~~~~~~~~~~~L~i~~~ 171 (304)
T 2yd9_A 96 LTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSA----SNGRIKQLRSGALQIESS 171 (304)
T ss_dssp EEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGG----GTTSEEECTTSCEEECSC
T ss_pred EEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCC----CcceEEeCCCeEEEEccC
Confidence 999876 666667777778999999999999999999999999999886321 11122 334568999999
Q ss_pred CCCCCCeEEEEEEEcCCCceeeE-EEEEEE--EcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecC
Q psy12060 555 NPERDPAMYQCRAKNQLKTRYSS-AQLRVL--TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS 631 (978)
Q Consensus 555 ~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~--~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~ 631 (978)
.. +|+|.|+|.|.|..|..... ..+.|. ..+|.+...+. ...+.+|+.++|.|.+.|.|.|.+.|+++|..+..
T Consensus 172 ~~-~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~--~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~ 248 (304)
T 2yd9_A 172 EE-TDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPM--SHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTP 248 (304)
T ss_dssp CG-GGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCC--CBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSC
T ss_pred Cc-ccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCC--ceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCC
Confidence 86 99999999999998876543 455554 23566655443 24478999999999999999999999999999876
Q ss_pred CCcEEEeecCc--EEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCce
Q psy12060 632 GGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681 (978)
Q Consensus 632 ~~~~~~~~~~~--l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 681 (978)
..+. ..+. |.|.++ +|+|.|+|.|.|..|.....+.|.|..++..
T Consensus 249 ~~~~---~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 249 EDDM---PVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKA 295 (304)
T ss_dssp SSSC---CBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-------
T ss_pred cccc---cCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCccc
Confidence 5432 2333 666655 6999999999999999999999999876653
No 51
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=275.75 Aligned_cols=263 Identities=23% Similarity=0.430 Sum_probs=206.1
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEE-cCccCCCCceeee----cccEEEeCCCCCCCCeEEEEEEEeCCCce-EEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTR-RGSPLPRNAYFEN----FNRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTI 483 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~-~~~~l~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l 483 (978)
.+.+|+.++|.|.+.|.|. .|.|++ ++..+....++.. ....|.|.+++.+|+|.|+|.+.|..|.. +..+.|
T Consensus 15 ~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l 93 (291)
T 2wim_A 15 ELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVL 93 (291)
T ss_dssp EEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEE
T ss_pred EecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEE
Confidence 5679999999999999875 999999 6777655443321 23589999999999999999999988876 567888
Q ss_pred EEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEE-EecCEEEEEeCCCCCCCeE
Q psy12060 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF-IQDNVLTIRYLNPERDPAM 562 (978)
Q Consensus 484 ~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~d~G~ 562 (978)
.|..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ...++. ..++.|.|.++.. +|+|.
T Consensus 94 ~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~L~i~~v~~-~d~G~ 167 (291)
T 2wim_A 94 EIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTI-----SDNRFAMLANNNLQILNINK-SDEGI 167 (291)
T ss_dssp EEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBC-----CCSSEEECTTSCEEETTCCG-GGCEE
T ss_pred EecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCcccccc-----CCceEEEccCCCEEEEecch-hhCEE
Confidence 9998888877777788999999999999999999999999999877532 223333 3456899999986 99999
Q ss_pred EEEEEEcCCCceeeE--EEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEee-
Q psy12060 563 YQCRAKNQLKTRYSS--AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE- 639 (978)
Q Consensus 563 Y~C~a~n~~g~~~~~--~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~- 639 (978)
|+|.+.|..+..... ..+.+. .+|.+...+......+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+..
T Consensus 168 Y~C~~~n~~~~~~~~~~~~~~v~-~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~ 246 (291)
T 2wim_A 168 YRCEGRVEARGEIDFRDIIVIVN-VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS 246 (291)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEE-BCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECST
T ss_pred EEEEEEECCCCeeEEeeEEEEec-cCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCC
Confidence 999999987654433 344444 4566554433334457899999999999999999999999999998877766543
Q ss_pred cCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCc
Q psy12060 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680 (978)
Q Consensus 640 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 680 (978)
.+.|.|.++..+|+|.|+|.|.|..|....++.|.|..++.
T Consensus 247 ~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 247 NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp TCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred ccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEecc
Confidence 35699999999999999999999999999999999876553
No 52
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=6.6e-30 Score=289.49 Aligned_cols=374 Identities=16% Similarity=0.240 Sum_probs=235.0
Q ss_pred CCCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC-----------------CCceee------ecccEEEeCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP-----------------RNAYFE------NFNRILTIPNVKVE 461 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~-----------------~~~~~~------~~~~~L~i~~~~~~ 461 (978)
..+.+|++++|.|.+.+.+ .+.+.|||+. ..+. ...++. .....|.|.+++.+
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 90 (475)
T 1iga_A 11 EVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPE 90 (475)
T ss_pred EEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChh
Confidence 4567999999999998764 5689999963 2110 011221 12357999999999
Q ss_pred CCeEEEEEEEeCCCc------eEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CC-C-eeEEeECCEE
Q psy12060 462 DQGEYICRASNDRSA------LESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-V-TYSWFRNGEL 528 (978)
Q Consensus 462 d~G~Y~C~a~n~~g~------~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~-~i~W~~~g~~ 528 (978)
|+|.|.|.+.+..|. ....+.|.|.. +|.+..... ..+.+|+.++|.|.+.|. |. + .|.|++++..
T Consensus 91 D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~ 169 (475)
T 1iga_A 91 DTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQG 169 (475)
T ss_pred hCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc-cccCCCCeEEEEEEEeeecCCCceEEEEcCCCcc
Confidence 999999999997652 22446777763 455543322 234789999999999987 55 4 9999998854
Q ss_pred CCCCCCCC---CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEE--EE----------------E-cC
Q psy12060 529 LNSETLPL---EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR--VL----------------T-LK 586 (978)
Q Consensus 529 ~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~--v~----------------~-~~ 586 (978)
........ ...+.+ .....|.|..+.. +|+|.|+|.|.|..+.. ....+. |. . .+
T Consensus 170 ~~~~~~~~~~~~~~g~~-~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~~~-~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~ 246 (475)
T 1iga_A 170 VTARNFPPSQDASGDLY-TTSSQLTLPATQC-LAGKSVTCHVKHYTNPS-QDVTVPCPVPSTPPTPSPSTPPTPSPSCCH 246 (475)
T ss_pred cceEeCCceecCCCCcE-EEEEEEEechhHc-CCCceEEEEEEECCCCc-eeeeEecccccCcccccccccccCCCCCCC
Confidence 32110000 011222 2234688887765 89999999999987632 222222 20 0 12
Q ss_pred CccccCCCCcceeecCCCeEEEEEeeccCCC---CeeEEeeCCEEecCCC--cEE------EeecCcEEEccccCCCCEE
Q psy12060 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPK---PKFVWKKDGNIIGSGG--RRK------IFENGNLLISPVSRDDSGI 655 (978)
Q Consensus 587 p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~i~W~~~g~~~~~~~--~~~------~~~~~~l~i~~~~~~d~G~ 655 (978)
|.+...+. ....+.+|++++|.|.+.|.++ +.|+| + +..+.... ... ....+.|.|.++..+|+|.
T Consensus 247 p~v~~~~p-~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~ 323 (475)
T 1iga_A 247 PRLSLHRP-ALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 323 (475)
T ss_pred cEEEEcCC-ChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCc
Confidence 32212111 1112578999999999998754 59999 4 33332211 001 1133469999999999999
Q ss_pred EEEEEEeCCceeeeeEEEEE---EeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccC
Q psy12060 656 YSCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 732 (978)
Q Consensus 656 Y~C~a~n~~g~~~~~~~l~v---~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~ 732 (978)
|+|.|.|..|.......|.+ ..+|.+....+....+..|+.+.|.|.+.+.+++.+.+.|+++|..+...... ...
T Consensus 324 Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~-~~~ 402 (475)
T 1iga_A 324 FTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYL-TWA 402 (475)
T ss_pred EEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCcee-ecc
Confidence 99999999887655555532 34555444433333466889999999999987666788999999988653200 000
Q ss_pred Ceee---cC-----CceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCCCceEEEEeeC
Q psy12060 733 PNIN---ID-----GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 791 (978)
Q Consensus 733 ~~~~---~~-----~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~~~~~~~~~ 791 (978)
.... .+ .+.|.|.....+|.|.|+|.|.|.......... .+..+|+.|..+.+.-+.+
T Consensus 403 ~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ 468 (475)
T 1iga_A 403 SRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPLAFTQK-TIDRLAGKPTHVNVSVVMA 468 (475)
T ss_pred cccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCCCcceEE-EEecCCCCceeEEEEEEEh
Confidence 0111 11 135667777778899999999998654322211 2334556555555543333
No 53
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.97 E-value=2e-31 Score=300.78 Aligned_cols=349 Identities=17% Similarity=0.276 Sum_probs=223.4
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC-----------------CCceee------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP-----------------RNAYFE------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~-----------------~~~~~~------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.+ .+.|.|+|+. ..+. ...++. .....|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (457)
T 1hzh_H 11 VKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSAD 90 (457)
T ss_dssp EECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCccc
Confidence 457999999999998876 6789999953 2110 011221 122479999999999
Q ss_pred CeEEEEEEEeCCC------------ceEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeE
Q psy12060 463 QGEYICRASNDRS------------ALESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFR 524 (978)
Q Consensus 463 ~G~Y~C~a~n~~g------------~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~ 524 (978)
+|.|+|.|.|..| .....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |. +.|.|+|
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 170 (457)
T 1hzh_H 91 TAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 170 (457)
T ss_dssp CEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETT
T ss_pred CEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEe
Confidence 9999999999865 222445677764 5655544434457899999999999987 64 8999999
Q ss_pred CCEECCCCCCC--CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEE----------------cC
Q psy12060 525 NGELLNSETLP--LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT----------------LK 586 (978)
Q Consensus 525 ~g~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~----------------~~ 586 (978)
++..+...... ....+.+. ....|.|..+.. +| |.|+|.|.|..+.......+.+.. .+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~~-~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 247 (457)
T 1hzh_H 171 GALTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSL-GT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGG 247 (457)
T ss_dssp TTBCTTEEEEEEEECTTSCEE-EEEEEEECSGGG-GT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSS
T ss_pred CCEeccceEcCceECCCCCEE-EEEEEEeccccc-CC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCC
Confidence 98654311000 00112222 224788988875 78 999999999877654443333221 02
Q ss_pred CccccCCCCcceeecCCCeEEEEEeeccCCCC----eeEEeeCCEEecCCCcE--EEeecCcEEEcc---ccCCC---CE
Q psy12060 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKP----KFVWKKDGNIIGSGGRR--KIFENGNLLISP---VSRDD---SG 654 (978)
Q Consensus 587 p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~----~i~W~~~g~~~~~~~~~--~~~~~~~l~i~~---~~~~d---~G 654 (978)
|.+...+......+.+|++++|.|.+.|.|++ .|+|++++..+...... ....++.|.+.. +...| +|
T Consensus 248 p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G 327 (457)
T 1hzh_H 248 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 327 (457)
T ss_dssp CEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTC
T ss_pred ceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCC
Confidence 22211111111114679999999999998653 99999999887643221 223345555443 23444 99
Q ss_pred EEEEEEEeCCceeeeeEEEE----EEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccc
Q psy12060 655 IYSCTATNVHGMDESKGRLI----VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 730 (978)
Q Consensus 655 ~Y~C~a~n~~g~~~~~~~l~----v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~ 730 (978)
.|+|.|.|..+.......+. +..+|.+....+....+..|+ +.|.|.+.+.+++.+.+.|+++|..+.....
T Consensus 328 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~--- 403 (457)
T 1hzh_H 328 EYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKT--- 403 (457)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEE---
T ss_pred cEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceee---
Confidence 99999998766544333332 234555544433333334455 9999999998777778999999998854211
Q ss_pred cCCeeecCC-----ceEEEeccCCCCCEEEEEEEEcCCCc
Q psy12060 731 ETPNINIDG-----GLLEITNASFADAGEYECVVKSTVGK 765 (978)
Q Consensus 731 ~~~~~~~~~-----~~l~i~~~~~~d~g~Y~c~a~n~~G~ 765 (978)
.......++ ..|.|.....+|+|.|+|.|.|..-.
T Consensus 404 ~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 404 TPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred cCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCC
Confidence 001111111 24556666567899999999997654
No 54
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.97 E-value=4.1e-31 Score=298.19 Aligned_cols=358 Identities=16% Similarity=0.229 Sum_probs=214.5
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEcc--cccccccc-------cccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~--~~~~~~~~-------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.|.| .+.|.|||++ .....+.. .........|+.+. ..+|.|.++ +.+|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~ 91 (457)
T 1hzh_H 13 KPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL-RSADT 91 (457)
T ss_dssp CTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC-CGGGC
T ss_pred cCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC-CcccC
Confidence 3577799999999877 6799999963 21111100 01111223455542 137999998 89999
Q ss_pred eEEEEEEEeCce---------e--EEeEEEEEEEee----ecccccCCCCeeeecccCeEEEeCCCCCCCC-ceEEEecc
Q psy12060 270 GSYHCKASNKFG---------S--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARD 333 (978)
Q Consensus 270 G~Y~C~a~n~~g---------~--~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~i~W~~~ 333 (978)
|.|+|.|.|..| . .....+.|.|.. +|.+........+..|+.++|.|.+.+..|. +.|+|+|+
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~ 171 (457)
T 1hzh_H 92 AVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 171 (457)
T ss_dssp EEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTT
T ss_pred EEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeC
Confidence 999999999865 1 123345666643 2222222223345678899999999655575 89999999
Q ss_pred cccccccccceEEEeeCC------cEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCc--------ccccc
Q psy12060 334 YFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF--------QQLKF 399 (978)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~--------~~~~~ 399 (978)
+.++....... ....++ .|.|.++..+| |.|+|.|.|..+..... ..+.+...+.. ..+..
T Consensus 172 ~~~~~~~~~~~-~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~ 246 (457)
T 1hzh_H 172 ALTSGVHTFPA-VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD---KKAEPKSCDKTHTCPPCPAPELLG 246 (457)
T ss_dssp TBCTTEEEEEE-EECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEE---EECCCCCSCSSCSCCSCCCCCCSS
T ss_pred CEeccceEcCc-eECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCccee---EEecccCCCcccccCCCCCccccC
Confidence 86542211111 112223 68999999999 99999999976532111 11221110000 00000
Q ss_pred CCCC---CCCCCCCCCCCCcEEEEEEEeecCCC----eeEEEEcCccCCCCce---eeecccEEEeCC---CCCCC---C
Q psy12060 400 PNNF---PKTFPEAPKAGDKVRLECVAFGYPVP----SYNWTRRGSPLPRNAY---FENFNRILTIPN---VKVED---Q 463 (978)
Q Consensus 400 ~~~~---~~~~~~~v~~G~~~~l~C~~~g~p~~----~v~W~~~~~~l~~~~~---~~~~~~~L~i~~---~~~~d---~ 463 (978)
++.+ ++.....+.+|++++|.|.+.|.|++ .|+|+|++..+..... ....++.|.|.. +...| +
T Consensus 247 ~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~ 326 (457)
T 1hzh_H 247 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG 326 (457)
T ss_dssp SCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHT
T ss_pred CceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCC
Confidence 0000 00000125689999999999987553 9999999988764321 112233333332 34555 9
Q ss_pred eEEEEEEEeCCCceEEEEEE----EEEeeceeeccCCc-ccccCCCceeEEEEeecCCC--CeeEEeECCEECCCCCCC-
Q psy12060 464 GEYICRASNDRSALESSVTI----SIQAEPNFTIPLTD-KHMDNQADLTWTCEAFGVPD--VTYSWFRNGELLNSETLP- 535 (978)
Q Consensus 464 G~Y~C~a~n~~g~~~~~~~l----~V~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~p~--~~i~W~~~g~~~~~~~~~- 535 (978)
|.|+|.|.|..+.......+ .+..+|.+.+.+.. ..+..|+ ++|.|.+.|.++ +.|+|+|||..+......
T Consensus 327 G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 405 (457)
T 1hzh_H 327 KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP 405 (457)
T ss_dssp CCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECC
T ss_pred CcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecC
Confidence 99999999876554333333 34567877654433 3355555 999999998643 499999999998632110
Q ss_pred --CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 536 --LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 536 --~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
......+. ....|.+..... +|+|.|+|.|.|....
T Consensus 406 ~~~~~~g~~~-~~s~l~i~~~~~-~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 406 PVLDSDGSFF-LYSKLTVDKSRW-QQGNVFSCSVMHEALH 443 (457)
T ss_dssp CEECTTSCEE-EEEEEEEEHHHH-HTTCCEEEEEECTTSG
T ss_pred ceeCCCCCEE-EEEEEEEChHHc-cCCCeEEEEEEECCCC
Confidence 01111221 223466665543 6899999999997643
No 55
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=9.4e-30 Score=288.24 Aligned_cols=359 Identities=14% Similarity=0.174 Sum_probs=220.3
Q ss_pred ccCcEEEEEEeecCC--CCeEEEEEcc--cccccccc-------cccCCCCCCceEee------cceEEEeCCCCCCCCe
Q psy12060 208 ILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNLIINDPRQVEDRG 270 (978)
Q Consensus 208 ~g~~~~l~C~~~g~p--~~~v~W~~~~--~~~~~~~~-------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~G 270 (978)
+|++++|.|.+.+.+ .+.+.|||+. +....+.. .........|+.+. ..+|.|.++ +.+|+|
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~G 93 (475)
T 1iga_A 15 PGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSL-RPEDTA 93 (475)
T ss_pred CCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCC-ChhhCE
Confidence 467799999998765 5789999964 21111100 00011123455442 247999997 899999
Q ss_pred EEEEEEEeCcee-----EEeEEEEEEEee----ecccccCCCCeeeecccCeEEEeCCCCCCCC-c-eEEEecccccccc
Q psy12060 271 SYHCKASNKFGS-----IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-V-NYYWARDYFPNFV 339 (978)
Q Consensus 271 ~Y~C~a~n~~g~-----~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~-~i~W~~~~~~~~~ 339 (978)
.|+|.+.|..|. .....+.|.|.. .|.+... .+.....|+.++|.|.+.+..|. + .|.|+|++.....
T Consensus 94 ~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~ 172 (475)
T 1iga_A 94 VYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPL-SLCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTA 172 (475)
T ss_pred EEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEec-CccccCCCCeEEEEEEEeeecCCCceEEEEcCCCcccce
Confidence 999999998752 223455666653 1222111 12223578889999999655576 4 9999998854221
Q ss_pred cccceEEEeeC------CcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCc----------cccccCCC-
Q psy12060 340 EEDKRVFVSYD------GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF----------QQLKFPNN- 402 (978)
Q Consensus 340 ~~~~~~~~~~~------~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~----------~~~~~~~~- 402 (978)
..........+ +.|.|..+..+|+|.|+|.|.|..+. .....+.|.|...+.. .....|..
T Consensus 173 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~--~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~ 250 (475)
T 1iga_A 173 RNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP--SQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLS 250 (475)
T ss_pred EeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCC--ceeeeEecccccCcccccccccccCCCCCCCcEEE
Confidence 11111100112 35788888889999999999998752 1122233333211100 00000000
Q ss_pred CCCCCCCCCCCCCcEEEEEEEeecCC---CeeEEEEcCccCCCCce-----e----eecccEEEeCCCCCCCCeEEEEEE
Q psy12060 403 FPKTFPEAPKAGDKVRLECVAFGYPV---PSYNWTRRGSPLPRNAY-----F----ENFNRILTIPNVKVEDQGEYICRA 470 (978)
Q Consensus 403 ~~~~~~~~v~~G~~~~l~C~~~g~p~---~~v~W~~~~~~l~~~~~-----~----~~~~~~L~i~~~~~~d~G~Y~C~a 470 (978)
........+.+|++++|.|.+.|.++ +.|+| ++..+..... . ....+.|.|.++..+|+|.|+|.|
T Consensus 251 ~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a 328 (475)
T 1iga_A 251 LHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTA 328 (475)
T ss_pred EcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEE
Confidence 00011123579999999999998754 59999 4444422110 0 012357999999999999999999
Q ss_pred EeCCCceEEEEEEE---EEeeceeeccCC-cccccCCCceeEEEEeecC-C-CCeeEEeECCEECCCCCCC----CCC--
Q psy12060 471 SNDRSALESSVTIS---IQAEPNFTIPLT-DKHMDNQADLTWTCEAFGV-P-DVTYSWFRNGELLNSETLP----LED-- 538 (978)
Q Consensus 471 ~n~~g~~~~~~~l~---V~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~g~~~~~~~~~----~~~-- 538 (978)
.|..+.......|. +..+|.+.+.+. ...+.+|++++|.|.+.|. | .+.|+|+|+|..+...... ...
T Consensus 329 ~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~ 408 (475)
T 1iga_A 329 AYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPS 408 (475)
T ss_pred EcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccC
Confidence 99988765444553 356777765433 3347889999999999986 4 4699999999998654200 011
Q ss_pred -CCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 539 -QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 539 -~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
.+........|.|..... +|.|.|+|.|.|....
T Consensus 409 ~~~gt~~~~s~L~i~~~~~-~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 409 QGTTTFAVTSILRVAAEDW-KKGDTFSCMVGHEALP 443 (475)
T ss_pred CCCCcEEEEEEEEEChHHh-cCCCEEEEEEEcCCCC
Confidence 122222334577776654 7899999999997643
No 56
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.97 E-value=2.1e-30 Score=274.25 Aligned_cols=266 Identities=15% Similarity=0.215 Sum_probs=201.5
Q ss_pred CCceEEEccccEEEEEEeeec-------CCcCeEEEEeeCCEEccccccccccCCee-ecCCceEEEeccCCCCCEEEEE
Q psy12060 686 PPKITIAAHRNLQLRCSAHTE-------ELLDVAYIWTHNGVRIGNMDLNELETPNI-NIDGGLLEITNASFADAGEYEC 757 (978)
Q Consensus 686 ~~~~~~~~g~~~~l~C~~~~~-------p~~~~~~~W~~~g~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c 757 (978)
|....+..|+.++|.|.+.+. |.+ .+.|+++|..+.... ... ....+.|+|.++... .|.|+|
T Consensus 11 P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p--~i~W~~~g~~i~~~~------~~~~~~~~~~L~i~~~~~~-~g~Y~C 81 (303)
T 1i1r_A 11 PESPVVQLHSNFTAVCVLKEKCMDYFHVNAN--YIVWKTNHFTIPKEQ------YTIINRTASSVTFTDIASL-NIQLTC 81 (303)
T ss_dssp SSSCEEETTCCEEEEEEECHHHHHHHTCCGG--GEEEEETTEECCGGG------CEEEETTEEEEEECSCCCS-EEEEEE
T ss_pred cCCceEeCCCCEEEEEEECCccccccCCChh--heEEEECCEECChhh------eeeeCCcEEEEEEcCcCCC-ceEEEE
Confidence 456778999999999999874 444 458999999885421 111 112357999999887 499999
Q ss_pred EEEcCCCce---eeeEEEEEcCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEeccccccee
Q psy12060 758 VVKSTVGKI---STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834 (978)
Q Consensus 758 ~a~n~~G~~---s~~~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~ 834 (978)
.|.|. |.. ...+.+.+..+|++|.++.+.....++++|+|.+|.+.+. +++|.|+|+..+...|....
T Consensus 82 ~a~~~-g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~-~~~Y~v~~~~~~~~~~~~~~------- 152 (303)
T 1i1r_A 82 NILTF-GQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKA------- 152 (303)
T ss_dssp EEEET-TTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEEC-------
T ss_pred ecccC-CCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCCC-CcCEEEEEEecCCCCccCCC-------
Confidence 99884 432 3456778889999999999988888999999999987764 57999999875443332111
Q ss_pred eeecCCceeeEEeecc-CCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeeccc--ccCcEEEEEEeCCC
Q psy12060 835 VDRYTGRKEASIENVL-VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG--KIGDLSISWEPLPR 911 (978)
Q Consensus 835 ~~~~~~~~~~~~~~~L-~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~--~~~si~v~W~~p~~ 911 (978)
.......+++.+ | .|++.|.|+|.|.|..|.+.++.. .+.+....++.+|.++.+... +.++|.|+|++|
T Consensus 153 --~~~~~~~~~i~~-L~~p~t~Y~f~V~A~N~~G~~~s~~~--~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p-- 225 (303)
T 1i1r_A 153 --KRDTPTSCTVDY-STVYFVNIEVWVEAENALGKVTSDHI--NFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP-- 225 (303)
T ss_dssp --CSSCTTEEECSS-CCCTTSCEEEEEEEEETTEEEECCCE--EECGGGGEECCCCEEEEEECCSSSSSCEEEEEECC--
T ss_pred --cCCCceEEEECC-cCcccccEEEEEEEEcCCCCcccCCE--EECHHHeEecCCCcceEEEEecCCCCEEEEEECCC--
Confidence 112356788999 9 999999999999999999875433 233444456789999988654 678999999984
Q ss_pred CCCCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 912 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 912 ~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
...||.|++|+|+|+..+...|........ ......+.|.+|.|++.|.|+|+|.|.+|.|++|+
T Consensus 226 ~~~~~~i~~Y~v~y~~~~~~~w~~~~~~~~-~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~ 290 (303)
T 1i1r_A 226 SIKSVIILKYNIQYRTKDASTWSQIPPEDT-ASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD 290 (303)
T ss_dssp GGGGTSCEEEEEEEEETTCSSCEECCGGGG-CSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCC
T ss_pred CCCCcccEEEEEEEEeCCCCCceEEccccC-CCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCC
Confidence 456789999999999988778875432110 11123477999999999999999999999999985
No 57
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.97 E-value=7.1e-31 Score=281.39 Aligned_cols=259 Identities=20% Similarity=0.250 Sum_probs=207.0
Q ss_pred CCCCCCcEEEEEEEeec-CCCeeEEEEcCccCCCCcee--eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFGY-PVPSYNWTRRGSPLPRNAYF--ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~l~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 486 (978)
.+.+|++++|.|.+.+. |.+.|+|+|++..+....++ ......|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 17 ~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 96 (317)
T 2y25_A 17 EVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 96 (317)
T ss_dssp EEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTH
T ss_pred EECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEe
Confidence 56799999999999887 77899999999998755443 2344689999999999999999999999988888777777
Q ss_pred eeceeeccCCcccccCCCceeEEEEeec----------CCCCeeEEeECCEECCCCCCCCCCCCcEEE--ec--CEEEEE
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFG----------VPDVTYSWFRNGELLNSETLPLEDQDRYFI--QD--NVLTIR 552 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~--~~--~~l~i~ 552 (978)
.+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|+++|..+... .++.. .. ..|.|.
T Consensus 97 ~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~-------~~~~~~~~~~~~~L~i~ 169 (317)
T 2y25_A 97 AFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS-------DRVKTGVTGEQIWLQIN 169 (317)
T ss_dssp HHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCC-------SSEEEEECSSEEEEEEE
T ss_pred cCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCC-------CCeEEeccCCEEEEEEC
Confidence 6666554445566778999999998877 689999999999888632 23322 22 249999
Q ss_pred eCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEc-------------------CCccccCCCCcceeecCCCeEEEEEeec
Q psy12060 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTL-------------------KPSFKKRPLESETYAGEGGNVTIFCNPE 613 (978)
Q Consensus 553 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~-------------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~ 613 (978)
++.. +|+|.|+|.|.|..|....+..+.+... +|.+... .+....+..|+.+.|.|.+.
T Consensus 170 ~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~v~~g~~~~l~C~~~ 247 (317)
T 2y25_A 170 EPTP-NDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGG-LPDVVTIQEGKALNLTCNVW 247 (317)
T ss_dssp SCCG-GGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEB-CCSEEEEETTSBBCEEEEEE
T ss_pred cCCc-ccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCccccc-CCccEEEEcCCEEEEEEEEe
Confidence 9986 9999999999999888777666654310 1222221 23345688999999999999
Q ss_pred cCCCCeeEEeeCCEEecCCCcEEEeec-C---cEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEe
Q psy12060 614 AAPKPKFVWKKDGNIIGSGGRRKIFEN-G---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677 (978)
Q Consensus 614 ~~p~~~i~W~~~g~~~~~~~~~~~~~~-~---~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 677 (978)
|.|.|.+.|+++|..+..+.++.+... + .|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 248 g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 248 GDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp CSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 999999999999999988877777554 4 699999999999999999999999999999888863
No 58
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=1.3e-32 Score=308.11 Aligned_cols=350 Identities=15% Similarity=0.229 Sum_probs=228.2
Q ss_pred CCCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC-----------------CCceee------ecccEEEeCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP-----------------RNAYFE------NFNRILTIPNVKVE 461 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~-----------------~~~~~~------~~~~~L~i~~~~~~ 461 (978)
..+.+|++++|.|.+.+.+ .+.|.|+|++ ..+. ...++. ....+|.|.+++.+
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (434)
T 1igy_B 9 ELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSD 88 (434)
T ss_dssp CEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGG
T ss_pred eEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChH
Confidence 3567999999999998764 6789999974 2210 011221 12347999999999
Q ss_pred CCeEEEEEEEeCCCceEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEECCCCCCC
Q psy12060 462 DQGEYICRASNDRSALESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSETLP 535 (978)
Q Consensus 462 d~G~Y~C~a~n~~g~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~~~~~~~ 535 (978)
|+|.|+|.|.|..+.....+.|.|.. +|.+........+.+|+.++|.|.+.|. |.+ .|.|+|++..+......
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~ 168 (434)
T 1igy_B 89 DSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFP 168 (434)
T ss_dssp GCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECC
T ss_pred HCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecC
Confidence 99999999998654444456777763 4555433333346799999999999986 765 99999998754211000
Q ss_pred -CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEE----------c-CCccccCCCCcceeecCC
Q psy12060 536 -LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT----------L-KPSFKKRPLESETYAGEG 603 (978)
Q Consensus 536 -~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~----------~-~p~~~~~~~~~~~~~~~g 603 (978)
......+. ..+.|.|..+.. +| |.|+|.|.|..+.......+.+.. . .|.+...+......+.+|
T Consensus 169 ~~~~~~~~~-~~s~L~i~~~~~-~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G 245 (434)
T 1igy_B 169 AVLQSDLYT-LSSSVTVPSSPR-PS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLIT 245 (434)
T ss_dssp CEECSSCEE-EEEEEEEETTTT-TS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTT
T ss_pred ceecCCcEE-EEEEEEEcchhc-CC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccC
Confidence 00112232 235788988875 68 999999999988754444332210 0 022222111111116789
Q ss_pred CeEEEEEeeccCC----CCeeEEeeCCEEecCCCcEE--------EeecCcEEEccccCCCCEEEEEEEEeCCceeeeeE
Q psy12060 604 GNVTIFCNPEAAP----KPKFVWKKDGNIIGSGGRRK--------IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 671 (978)
Q Consensus 604 ~~~~l~C~~~~~p----~~~i~W~~~g~~~~~~~~~~--------~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 671 (978)
+.++|.|.+.|.+ .+.|+|+++|..+....... ....+.|.|.++..+|+|.|+|.|.|..|......
T Consensus 246 ~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 325 (434)
T 1igy_B 246 VTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEK 325 (434)
T ss_dssp SCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCC
T ss_pred CCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeE
Confidence 9999999999884 35899999998765321110 01234699999999999999999999988653333
Q ss_pred EE----EEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCC-----ceE
Q psy12060 672 RL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-----GLL 742 (978)
Q Consensus 672 ~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~-----~~l 742 (978)
.+ .+..+|.+....+... ...|+.++|.|.+.+.+++.+.+.|+++|..+...... ......++ +.|
T Consensus 326 ~v~~~~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~---~~~~~~~g~~~~~s~l 401 (434)
T 1igy_B 326 TISKTKGKPRAPQVYTIPPPKE-QMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNT---QPIMDTDGSYFVYSKL 401 (434)
T ss_dssp CCCCCCSCCBCCCCEEECCCSS-SSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEEC---CCCCCSSSCEEEEEEE
T ss_pred EEeccCCCCcCCEEEEECCCHH-HhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceec---cceeCCCCcEEEEEEE
Confidence 22 2334555443333222 23566799999999976667889999999887432100 00011111 356
Q ss_pred EEeccCCCCCEEEEEEEEcCCCc
Q psy12060 743 EITNASFADAGEYECVVKSTVGK 765 (978)
Q Consensus 743 ~i~~~~~~d~g~Y~c~a~n~~G~ 765 (978)
.|.....+|+|.|+|.|.|....
T Consensus 402 ~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 402 NVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EEEHHHHHTTCCEEEEEEETTSG
T ss_pred EECchhccCCCEEEEEEEcCCCC
Confidence 67777777899999999998654
No 59
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=2.1e-29 Score=265.79 Aligned_cols=264 Identities=16% Similarity=0.252 Sum_probs=195.8
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
.+|.|...|.+..+.. |++++|.|.+.| .+.|+|++..+ ......+++|.|.++ +.+
T Consensus 11 ~~P~i~~~~~~~~v~~-----G~~v~l~C~~~~----~i~W~~~~~~~-------------~~~~~~~~~L~i~~~-~~~ 67 (290)
T 2o26_X 11 SPPSIHPAQSELIVEA-----GDTLSLTCIDPD----FVRWTFKTYFN-------------EMVENKKNEWIQEKA-EAT 67 (290)
T ss_dssp -CCEESSCSSEEEEET-----TSCEEEEEECTT----EEEEEEECSSS-------------CEEEECSSEEEETTC-CGG
T ss_pred CCCEEeCCCCeEEEcC-----CCcEEEEECCCC----cEEEecCCcce-------------eeecCCCceEEEecc-CHH
Confidence 3578877777776544 566999999997 89999998653 011223478999997 899
Q ss_pred CCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCC-ceEEE-ecccccccccccceE
Q psy12060 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYW-ARDYFPNFVEEDKRV 345 (978)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~i~W-~~~~~~~~~~~~~~~ 345 (978)
|+|.|+|.|.| |. +..+.|.|..++.+........+.+|+.++|.|.+. + |. +.++| +++|.++ ....++
T Consensus 68 d~G~Y~C~~~n--g~--~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~-p~~~~v~W~~~~g~~l--~~~~~~ 139 (290)
T 2o26_X 68 RTGTYTCSNSN--GL--TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLT-D-PQVSQYSLIECDGKSL--PTDLTF 139 (290)
T ss_dssp GCEEEEEEESS--SC--EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBS-C-CSCEEEEEEETTSCCC--CTTCEE
T ss_pred hCeEEEEEeeC--Cc--cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCC-C-CCCceEEEEeCCCcCC--CCCCce
Confidence 99999999999 54 567788887766555555566778899999999985 4 77 99999 5777664 345666
Q ss_pred EEeeCCcEEEeeeeeecce-eeEEEEEeecccccccCCceeEEEccCCC-ccccccCCCCCCCCCCCCCCCCcEEEEEEE
Q psy12060 346 FVSYDGALYFSALEQIDAG-NYSCNVQSKVSDTGRNGPFFPLKVFPHSN-FQQLKFPNNFPKTFPEAPKAGDKVRLECVA 423 (978)
Q Consensus 346 ~~~~~~~L~i~~~~~~d~G-~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~-~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~ 423 (978)
....++.|.|.+++.+|+| .|+|.|.|..+. ..+..+.|.|...+. .+.+... .....+.+|+.++|.|.+
T Consensus 140 ~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~--~~s~~~~l~V~~~~~~~P~i~~~-----~~~~~v~~G~~v~l~C~~ 212 (290)
T 2o26_X 140 VPNPKAGITIKNVKRAYHRLCVRCAAQRDGTW--LHSDKFTLKVREAIKAIPVVSVP-----ETSHLLKKGDTFTVVCTI 212 (290)
T ss_dssp EEETTTEEEEESCCGGGTTCEEEEEEEETTEE--EECCCEEEEEECCCCSCCEEECS-----CSBCCCCTTCCEEEEEEE
T ss_pred eeCCCCCEEEecccHHHCCCEEEEEEEECCce--EEeEEEEEEEEeCCCCCCccccC-----CCcceEecCCcEEEEEEE
Confidence 7777789999999999999 999999997432 223346777763211 1111111 112467899999999999
Q ss_pred eecCCCe-eEEEEcCccC----CCCce-------eeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeec
Q psy12060 424 FGYPVPS-YNWTRRGSPL----PRNAY-------FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489 (978)
Q Consensus 424 ~g~p~~~-v~W~~~~~~l----~~~~~-------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 489 (978)
.|.|.|. |+|++++..+ ..... .......|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 213 ~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 213 KDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp EESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred ecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 9999996 9999999873 22111 12335689999999999999999999999999999999988765
No 60
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=4.5e-30 Score=274.00 Aligned_cols=277 Identities=20% Similarity=0.219 Sum_probs=194.7
Q ss_pred EeCCCceEecCCCccccCcEEEEEEeecCCCC-----eEEEEEcccccccccc-----cccCCCCCCceE---------e
Q psy12060 193 IKQPTDVVFDLSKRSILNDITLSCYAGGYPNP-----SYEWFKEDYVQDRLVA-----NLIDPLSDKRFT---------L 253 (978)
Q Consensus 193 ~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~-----~v~W~~~~~~~~~~~~-----~~~~~~~~~~~~---------~ 253 (978)
+..|.++.. .+|++++|.|.+.+.|.+ .|.|+|+|........ ..+. ...++. .
T Consensus 4 v~~P~~v~~-----~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~ 76 (313)
T 4fqp_A 4 VQAPTQVPG-----FLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYS--ESKRLEFVAARLGAEL 76 (313)
T ss_dssp EECCSEECC-----BTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEES--STTTEEESSCCTTSCC
T ss_pred EcCCCEEEE-----ecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceec--cCcceEEEeeccCCcc
Confidence 444555543 357789999999987765 4999999864321100 0011 111221 2
Q ss_pred ecceEEEeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecc
Q psy12060 254 SGGNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARD 333 (978)
Q Consensus 254 ~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~ 333 (978)
.+.+|.|.++ +.+|+|.|+|.|.+..+...+..+.|.+...|.+...........+....+.|.+..+.|.+.+.|+++
T Consensus 77 ~~~sL~I~~v-~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~ 155 (313)
T 4fqp_A 77 RNASLRMFGL-RVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSD 155 (313)
T ss_dssp CBCCEEECSC-CGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEET
T ss_pred cceEEEECcC-ChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecC
Confidence 3467999998 899999999999765444456677777766665444444444555666788998877889999999999
Q ss_pred cccccccccceEEEeeCC------cEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCC
Q psy12060 334 YFPNFVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTF 407 (978)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~ 407 (978)
+..+.. ..+.....++ .|.|.++..+|+|.|+|.|.|..+..... ..+.|.|..+|.+. +....
T Consensus 156 ~~~~~~--~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~-~~~~l~V~~~P~v~-~~~~~------ 225 (313)
T 4fqp_A 156 LGGMPN--TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQL-LTVNLTVYYPPEVS-ISGYD------ 225 (313)
T ss_dssp TCCEEE--EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEE-EEEECCBCEEEEEE-EECCC------
T ss_pred Cccccc--cceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccce-eeeecccccCCccc-ccccc------
Confidence 876432 2222222233 48888899999999999999976543322 23455665544321 11111
Q ss_pred CCCCCCCCcEEEEEEEeecCCC-eeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEE
Q psy12060 408 PEAPKAGDKVRLECVAFGYPVP-SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486 (978)
Q Consensus 408 ~~~v~~G~~~~l~C~~~g~p~~-~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 486 (978)
...+.+|+.++|.|.+.|+|.| .|+|+|+|.+++.... ..+.+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 226 ~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 226 NNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAV--AQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp SCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEE--EETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceE--EeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 1345689999999999999999 6999999999876543 335789999999999999999999999999999999998
Q ss_pred eec
Q psy12060 487 AEP 489 (978)
Q Consensus 487 ~~p 489 (978)
++|
T Consensus 304 ~~P 306 (313)
T 4fqp_A 304 EGP 306 (313)
T ss_dssp CCC
T ss_pred eCC
Confidence 765
No 61
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=4.7e-32 Score=303.63 Aligned_cols=354 Identities=14% Similarity=0.184 Sum_probs=220.9
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEccc--ccccccc-------cccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLVA-------NLIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~~--~~~~~~~-------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.|.+ .+.|.|||++. .+..+.. .........|+.+. ..+|.|.++ +.+|+
T Consensus 12 ~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~ 90 (434)
T 1igy_B 12 RPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSL-TSDDS 90 (434)
T ss_dssp CTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSB-CGGGC
T ss_pred cCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCC-ChHHC
Confidence 3577899999999864 67899999742 1110100 00111123455542 237999997 89999
Q ss_pred eEEEEEEEeCceeEEeEEEEEEEee----ecccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccccccccc---
Q psy12060 270 GSYHCKASNKFGSIISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEE--- 341 (978)
Q Consensus 270 G~Y~C~a~n~~g~~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~~--- 341 (978)
|.|+|.|.|..+. .+..+.|.|.. +|.+....+...+..|+.++|.|.+.+..|.+ .|.|+|++..+....
T Consensus 91 G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~ 169 (434)
T 1igy_B 91 AVYYCVREGEVPY-WGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPA 169 (434)
T ss_dssp SEECCCCSSSSCC-CCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCC
T ss_pred EEEEEEEEccccc-cCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCc
Confidence 9999999986432 12345666642 22222112223346788899999996545776 999999987532111
Q ss_pred ---cceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEcc---------CCCcccc-ccCCCCCCCCC
Q psy12060 342 ---DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP---------HSNFQQL-KFPNNFPKTFP 408 (978)
Q Consensus 342 ---~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~---------~~~~~~~-~~~~~~~~~~~ 408 (978)
...+. ..+.|.|.++..+| |.|+|.|.|..+..... ..+.+.. .+..+.+ ..++. ..
T Consensus 170 ~~~~~~~~--~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~---~~~~~~~~~~~v~~~~~~~~p~v~~~~p~----~~ 239 (434)
T 1igy_B 170 VLQSDLYT--LSSSVTVPSSPRPS-ETVTCNVAHPASSTKVD---KKIVPRDCGCKPCICTVPEVSSVFIFPPK----PK 239 (434)
T ss_dssp EECSSCEE--EEEEEEEETTTTTS-SCCEEEEECTTTTCCEE---EECCCCCCCCCCCCCCCSSSCCEEEECCC----HH
T ss_pred eecCCcEE--EEEEEEEcchhcCC-CcEEEEEEeCCCCccce---eeccCCCCCCccccCCCCcCcEEEEeCCC----hH
Confidence 11111 12468899998889 99999999987643211 1121110 0000011 11110 00
Q ss_pred CCCCCCCcEEEEEEEeecC----CCeeEEEEcCccCCCCcee-----e----ecccEEEeCCCCCCCCeEEEEEEEeCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYP----VPSYNWTRRGSPLPRNAYF-----E----NFNRILTIPNVKVEDQGEYICRASNDRS 475 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p----~~~v~W~~~~~~l~~~~~~-----~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 475 (978)
..+.+|++++|.|.+.|.+ .+.|+|+|++..+...... . .....|.|.++..+|+|.|+|.|.|..|
T Consensus 240 ~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 319 (434)
T 1igy_B 240 DTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAF 319 (434)
T ss_dssp HHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSC
T ss_pred HhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCC
Confidence 1167999999999999874 3589999999887532110 0 1234799999999999999999999887
Q ss_pred ce--EEEEEE--EEEeeceeeccCCcccccCCCceeEEEEeecC-C-CCeeEEeECCEECCCCCCC--CCCCCcEEEecC
Q psy12060 476 AL--ESSVTI--SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV-P-DVTYSWFRNGELLNSETLP--LEDQDRYFIQDN 547 (978)
Q Consensus 476 ~~--~~~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~g~~~~~~~~~--~~~~~~~~~~~~ 547 (978)
.. ...+.+ .+..+|.+...+.......|+.++|.|.+.|. | .+.|+|+|+|..+...... ....+.......
T Consensus 320 ~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s 399 (434)
T 1igy_B 320 PAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYS 399 (434)
T ss_dssp SSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEE
T ss_pred CCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEE
Confidence 54 233333 44567777654444344567789999999985 4 3489999999988532110 001122222234
Q ss_pred EEEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 548 VLTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 548 ~l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
.|.|..... +|+|.|+|.|.|....
T Consensus 400 ~l~i~~~~~-~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 400 KLNVQKSNW-EAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EEEEEHHHH-HTTCCEEEEEEETTSG
T ss_pred EEEECchhc-cCCCEEEEEEEcCCCC
Confidence 577776653 6899999999997643
No 62
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=7.4e-31 Score=283.34 Aligned_cols=268 Identities=24% Similarity=0.409 Sum_probs=139.0
Q ss_pred CCCCCCCcEEEEEEEeec-CCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEe
Q psy12060 409 EAPKAGDKVRLECVAFGY-PVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 487 (978)
..+.+|++++|.|.+.+. |.+.|+|+|++..+....++...+..|.|.+++.+|+|.|+|.|.|. |..+..+.|.|..
T Consensus 18 ~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~ 96 (334)
T 1ry7_B 18 LVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTD 96 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEec
Confidence 467899999999999976 67899999999998776666556789999999999999999999998 7777778888875
Q ss_pred ece----------------------eecc----CCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCc
Q psy12060 488 EPN----------------------FTIP----LTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541 (978)
Q Consensus 488 ~p~----------------------~~~~----~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~ 541 (978)
.|. +..+ .....+.+|++++|.|.+.|.|.+.+.|+|+|..+...... ....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~--~~~~ 174 (334)
T 1ry7_B 97 APSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRI--GGIK 174 (334)
T ss_dssp ----------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSST--TCCC
T ss_pred cCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccc--ccee
Confidence 432 2211 12245778999999999999999999999999887643210 0001
Q ss_pred EEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCc--cccCCCCcceeecCCCeEEEEEeeccCCCCe
Q psy12060 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS--FKKRPLESETYAGEGGNVTIFCNPEAAPKPK 619 (978)
Q Consensus 542 ~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~--~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 619 (978)
.......|.|.++.. +|+|.|+|.|.|..|.......|.|...++. ......+....+..|+.+.|.|.+.|.|.|.
T Consensus 175 ~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~ 253 (334)
T 1ry7_B 175 LRHQQWSLVMESVVP-SDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPH 253 (334)
T ss_dssp CCTTTTEEEECSCCG-GGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEE
T ss_pred cccceEEEEECCCCc-ccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCe
Confidence 111345899999986 9999999999999988888888888753321 1111223455688999999999999999999
Q ss_pred eEEee----CCEEecCCCcE--EEeec----------CcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCc
Q psy12060 620 FVWKK----DGNIIGSGGRR--KIFEN----------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680 (978)
Q Consensus 620 i~W~~----~g~~~~~~~~~--~~~~~----------~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 680 (978)
+.|++ +|..+..+... .+... ..|.|.++..+|+|.|+|.|.|..|....++.|.|...|.
T Consensus 254 v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 254 IQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp EEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCC
T ss_pred EEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCC
Confidence 99999 67766544321 11111 2699999999999999999999999999999999987664
No 63
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=1.9e-29 Score=269.22 Aligned_cols=266 Identities=17% Similarity=0.276 Sum_probs=197.7
Q ss_pred CCCCCCcEEEEEEEeecCCC-----eeEEEEcCccCCC-------------Ccee---------eecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYPVP-----SYNWTRRGSPLPR-------------NAYF---------ENFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~-----~v~W~~~~~~l~~-------------~~~~---------~~~~~~L~i~~~~~~d 462 (978)
.+..|++++|.|.+.+.+.+ .|+|+|++..... ..+. ...+.+|.|.+++.+|
T Consensus 11 ~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D 90 (313)
T 4fqp_A 11 PGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVED 90 (313)
T ss_dssp CCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGG
T ss_pred EEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhh
Confidence 45689999999999887665 4899998865321 1111 1123579999999999
Q ss_pred CeEEEEEEEe-CCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEee-cCCCCeeEEeECCEECCCCCCCCCCCC
Q psy12060 463 QGEYICRASN-DRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLEDQD 540 (978)
Q Consensus 463 ~G~Y~C~a~n-~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~~ 540 (978)
+|.|+|.+.+ ..+..+..+.|.|..+|.+...+....+..|+.+.|.|.+. +.|.+.+.|++++..+...........
T Consensus 91 ~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~ 170 (313)
T 4fqp_A 91 EGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLS 170 (313)
T ss_dssp CEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSST
T ss_pred CEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecc
Confidence 9999999865 45667788888888888877766667788899999999876 679999999999876642211000111
Q ss_pred cEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEE--EEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCC
Q psy12060 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA--QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 618 (978)
Q Consensus 541 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~--~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 618 (978)
........|.|..... +|+|.|+|.|.|..+...... .|.|. .+|.+...+.. ...+..|+.++|.|.+.|.|.|
T Consensus 171 ~~~~~~s~l~i~~~~~-~d~g~Y~C~a~n~~~~~~~~~~~~l~V~-~~P~v~~~~~~-~~~~~~g~~v~l~C~~~g~P~p 247 (313)
T 4fqp_A 171 GTVTVTSLWILVPSSQ-VDGKNVTCKVEHESFEKPQLLTVNLTVY-YPPEVSISGYD-NNWYLGQNEATLTCDARSNPEP 247 (313)
T ss_dssp TCEEEEEEEEECCCGG-GTTCEEEEEEECTTSSSCEEEEEECCBC-EEEEEEEECCC-SCEETTCCCEEEEEEEEEESCC
T ss_pred cccccceeeeeccccc-ccCeeEEEEEEccCcCccceeeeecccc-cCCcccccccc-ceeecCCCeEEEEEEecCCCCC
Confidence 1112223577877775 899999999999876654443 44443 35655444332 2346778999999999999998
Q ss_pred -eeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCce
Q psy12060 619 -KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681 (978)
Q Consensus 619 -~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 681 (978)
.|+|+++|..+... ....+++|.|.+++.+|+|.|+|.|.|..|....++.|.|.++|+.
T Consensus 248 ~~v~W~~~~~~l~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP~ 308 (313)
T 4fqp_A 248 TGYNWSTTMGPLPPF---AVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPPH 308 (313)
T ss_dssp CEEEEEETTBSCCTT---EEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC--
T ss_pred cEEEEEECCEECCCc---eEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCCC
Confidence 69999999988654 2345678999999999999999999999999999999999887653
No 64
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=4.8e-30 Score=278.77 Aligned_cols=260 Identities=13% Similarity=0.157 Sum_probs=171.9
Q ss_pred CCCCCCcEEEEEEEeecCC-----------CeeEEEEcCccC------C---CCceeeecccEEEeCCCCCCCCeEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPV-----------PSYNWTRRGSPL------P---RNAYFENFNRILTIPNVKVEDQGEYICR 469 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~-----------~~v~W~~~~~~l------~---~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 469 (978)
.+.+|+.++|.|.+.+.|. +.|+|+|++... . ...+....+..|.|.+++.+|+|.|+|.
T Consensus 18 ~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 97 (349)
T 4dep_C 18 QVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCM 97 (349)
T ss_dssp EEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEEE
T ss_pred EEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEEE
Confidence 5679999999999987664 899999998532 1 2223444567899999999999999999
Q ss_pred EEeCCCceEEEEEEEEEeeceeecc----CCcccccCCCceeEEEEe-----ecCCCCeeEEeECCEECCCCCCCCCCCC
Q psy12060 470 ASNDRSALESSVTISIQAEPNFTIP----LTDKHMDNQADLTWTCEA-----FGVPDVTYSWFRNGELLNSETLPLEDQD 540 (978)
Q Consensus 470 a~n~~g~~~~~~~l~V~~~p~~~~~----~~~~~~~~g~~~~l~C~~-----~~~p~~~i~W~~~g~~~~~~~~~~~~~~ 540 (978)
|.|..+.....+.|.|..+|.+... +....+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+. ...
T Consensus 98 a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~-------~~~ 170 (349)
T 4dep_C 98 LRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQ-------NFN 170 (349)
T ss_dssp EECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECC-------SCS
T ss_pred EecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECC-------Ccc
Confidence 9999998888999999887653322 234567899999999985 678999999999999886 334
Q ss_pred cEEEecCEEEEEeCCCCCCCeEEEEEEEcCC-Cce---eeEEEEEEEEc-----CCccccCCCCcceeecCCCeEEEEEe
Q psy12060 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQL-KTR---YSSAQLRVLTL-----KPSFKKRPLESETYAGEGGNVTIFCN 611 (978)
Q Consensus 541 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~-g~~---~~~~~l~v~~~-----~p~~~~~~~~~~~~~~~g~~~~l~C~ 611 (978)
++......|.|.++.. +|+|.|+|.|.|.. |.. .....+.|... +|.+..........+..|+.++|.|.
T Consensus 171 ~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~ 249 (349)
T 4dep_C 171 NVIPEGMNLSFLIALI-SNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCT 249 (349)
T ss_dssp SEEEETTEEEEESCCG-GGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEE
T ss_pred ceeecCCEEEEeeeee-cCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEE
Confidence 5556667899999997 99999999999987 443 34445555432 34333322212125789999999999
Q ss_pred ec----cCCCCeeEEeeCCEEecC-CCcEEE------------eecCcEEEccccCCCC-EEEEEEEEeCCceeeeeEEE
Q psy12060 612 PE----AAPKPKFVWKKDGNIIGS-GGRRKI------------FENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRL 673 (978)
Q Consensus 612 ~~----~~p~~~i~W~~~g~~~~~-~~~~~~------------~~~~~l~i~~~~~~d~-G~Y~C~a~n~~g~~~~~~~l 673 (978)
+. +.|.|.+.|+++|..+.. ..+..+ ....+|.|.++..+|+ |.|+|.|.|..|.....+.|
T Consensus 250 ~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l 329 (349)
T 4dep_C 250 VYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKV 329 (349)
T ss_dssp EEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-
T ss_pred EEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEE
Confidence 98 568899999999988765 222111 1123499999999999 99999999999999999888
Q ss_pred EEEe
Q psy12060 674 IVLH 677 (978)
Q Consensus 674 ~v~~ 677 (978)
.|..
T Consensus 330 ~v~~ 333 (349)
T 4dep_C 330 KQKV 333 (349)
T ss_dssp ----
T ss_pred eeec
Confidence 8865
No 65
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=2.6e-29 Score=269.72 Aligned_cols=255 Identities=16% Similarity=0.219 Sum_probs=196.2
Q ss_pred CCCCCCcEEEEEEEeec---------CCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCe-EEEEEEEeCCCceEE
Q psy12060 410 APKAGDKVRLECVAFGY---------PVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQG-EYICRASNDRSALES 479 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~---------p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a~n~~g~~~~ 479 (978)
.+.+|++++|.|.+.+. |.+.|+|+|++..+....+. ..++.|.|.+++.+|+| .|+|.|.|..|....
T Consensus 40 ~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~-~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~ 118 (329)
T 3oq3_B 40 MAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR-VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQ 118 (329)
T ss_dssp EECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT-EETTEEEESSCCGGGGGCCEEEEEECTTSCEEE
T ss_pred EEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce-eecceEEEcCCChHhCCCcEEEEEEeCCCceee
Confidence 35799999999999874 55799999999887543332 44789999999999999 999999999887555
Q ss_pred EEEEEE-EeeceeeccCCcccccCCCceeEEEEeecCC-CCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCC
Q psy12060 480 SVTISI-QAEPNFTIPLTDKHMDNQADLTWTCEAFGVP-DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 557 (978)
Q Consensus 480 ~~~l~V-~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 557 (978)
...+.| ..+|.+........+.+|+++.|.|.+.|.| .+.+.|+|++..+.. ...++....+.|.|.++..
T Consensus 119 ~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~------~~~~~~~~~~~L~I~~v~~- 191 (329)
T 3oq3_B 119 GIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELII------DGTKYSQSGQNLIIHNPEL- 191 (329)
T ss_dssp EEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCC------SSSSEEEETTEEEECSCCG-
T ss_pred EEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCC------CCceEecCCCEEEEeecCh-
Confidence 443344 3455544444444577899999999999999 899999999998853 3345555678999999996
Q ss_pred CCCeEEEEEEEcC--CCceeeE----EEEEEEEcCCc---cccCCCCcceeecCCCeEEEEEeeccCC---CC-eeEEee
Q psy12060 558 RDPAMYQCRAKNQ--LKTRYSS----AQLRVLTLKPS---FKKRPLESETYAGEGGNVTIFCNPEAAP---KP-KFVWKK 624 (978)
Q Consensus 558 ~d~G~Y~C~a~n~--~g~~~~~----~~l~v~~~~p~---~~~~~~~~~~~~~~g~~~~l~C~~~~~p---~~-~i~W~~ 624 (978)
+|+|.|+|.|.|. .|..... ..|.|.. +|. ..+ .+....+..|+.++|.|.+.+.| .+ .+.|++
T Consensus 192 ~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~-~~~~~~~~~--~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~ 268 (329)
T 3oq3_B 192 EDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIP-SQDHRFKLI--LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWEN 268 (329)
T ss_dssp GGCEEEEEEEEECCTTSSSCEEEEEEEEEEEEC-CCCCCEEEE--CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEEC
T ss_pred hhCEEEEEEEEecccCCCceeEEEeeEEEEEEC-CCCCCCcee--cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEE
Confidence 9999999999987 6554333 5566654 331 111 23446688999999999999998 77 889999
Q ss_pred CCEEe-cCCCcEEEe-------ecCcEEEccccCCCCE-EEEEEEEeCCceeeeeEEEEE
Q psy12060 625 DGNII-GSGGRRKIF-------ENGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRLIV 675 (978)
Q Consensus 625 ~g~~~-~~~~~~~~~-------~~~~l~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~v 675 (978)
+|..+ ..+.+.... ..+.|.|.+++.+|+| .|+|.|.|..|....++.|.|
T Consensus 269 ~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 269 PSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp TTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred CCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 99874 433332222 3456999999999999 999999999999988887765
No 66
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.96 E-value=4.4e-29 Score=263.27 Aligned_cols=250 Identities=20% Similarity=0.249 Sum_probs=194.4
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEee
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAE 488 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 488 (978)
..+.+|++++|.|.+.+ .|+|+|++..+ ......+..|.|.+++.+|+|.|+|.|.| |. +..+.|.|..+
T Consensus 22 ~~v~~G~~v~l~C~~~~----~i~W~~~~~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~-~~~~~l~V~~~ 91 (290)
T 2o26_X 22 LIVEAGDTLSLTCIDPD----FVRWTFKTYFN---EMVENKKNEWIQEKAEATRTGTYTCSNSN--GL-TSSIYVFVRDP 91 (290)
T ss_dssp EEEETTSCEEEEEECTT----EEEEEEECSSS---CEEEECSSEEEETTCCGGGCEEEEEEESS--SC-EEEEEEEEECS
T ss_pred EEEcCCCcEEEEECCCC----cEEEecCCcce---eeecCCCceEEEeccCHHhCeEEEEEeeC--Cc-cEEEEEEEeCC
Confidence 35679999999999887 89999999987 12233448999999999999999999999 44 77889999988
Q ss_pred ceeeccCCcccccCCCceeEEEEeecCCC-CeeEEe-ECCEECCCCCCCCCCCCcEEE-ecCEEEEEeCCCCCCCe-EEE
Q psy12060 489 PNFTIPLTDKHMDNQADLTWTCEAFGVPD-VTYSWF-RNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPA-MYQ 564 (978)
Q Consensus 489 p~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~i~W~-~~g~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~d~G-~Y~ 564 (978)
|.+...+....+.+|+.+.|.|.+.+ |. +.++|+ ++|..+. ...++.. ..+.|.|.++.. +|+| .|+
T Consensus 92 ~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~-------~~~~~~~~~~~~L~i~~v~~-~d~G~~Y~ 162 (290)
T 2o26_X 92 AKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLP-------TDLTFVPNPKAGITIKNVKR-AYHRLCVR 162 (290)
T ss_dssp SCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCC-------TTCEEEEETTTEEEEESCCG-GGTTCEEE
T ss_pred CcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCC-------CCCceeeCCCCCEEEecccH-HHCCCEEE
Confidence 87666666777889999999999986 77 999995 6887775 2334333 346899999996 9999 999
Q ss_pred EEEEcCCCceee-EEEEEEEE---cCCccccCCCCcceeecCCCeEEEEEeeccCCCCe-eEEeeCCEEe----cCCCcE
Q psy12060 565 CRAKNQLKTRYS-SAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK-FVWKKDGNII----GSGGRR 635 (978)
Q Consensus 565 C~a~n~~g~~~~-~~~l~v~~---~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~g~~~----~~~~~~ 635 (978)
|.|.|..+.... ...+.|.. .+|.+...+.. ..+.+|+.++|.|.+.+.|.|. +.|+++|..+ ......
T Consensus 163 C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~--~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~ 240 (290)
T 2o26_X 163 CAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETS--HLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNS 240 (290)
T ss_dssp EEEEETTEEEECCCEEEEEECCCCSCCEEECSCSB--CCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCE
T ss_pred EEEEECCceEEeEEEEEEEEeCCCCCCccccCCCc--ceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccc
Confidence 999998544332 45666652 35666544432 3578999999999999999986 9999998763 222211
Q ss_pred ------EEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCC
Q psy12060 636 ------KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679 (978)
Q Consensus 636 ------~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 679 (978)
.....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 241 ~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 241 WHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp EEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred cccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 12334579999999999999999999999999888888887654
No 67
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.96 E-value=1.3e-28 Score=261.70 Aligned_cols=267 Identities=15% Similarity=0.180 Sum_probs=197.8
Q ss_pred CceEEEccccEEEEEEeeec--CC-cCeEEEEeeCCEEccccccccccCCeeecCC---ceEEEeccCCCCCEEEEEEEE
Q psy12060 687 PKITIAAHRNLQLRCSAHTE--EL-LDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVK 760 (978)
Q Consensus 687 ~~~~~~~g~~~~l~C~~~~~--p~-~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~Y~c~a~ 760 (978)
....+..|+.++|.|.+.++ +. +...+.|+++|..+.... ......+ +.|+|.++...|+|.|.|.+.
T Consensus 8 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~~------~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~ 81 (313)
T 2d9q_B 8 SAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGR------QQRLSDGTQESIITLPHLNHTQAFLSCSLNW 81 (313)
T ss_dssp SCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTCE------ECCCSSSCCCEEEEESCCCSSEEEEEEEEES
T ss_pred CCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCccc------eEEEecCeEEEEEEEeccCCCccceEEeeec
Confidence 45668899999999999987 21 123458999998774321 1111222 579999999999999999997
Q ss_pred cCCCceeeeEEEEEcCCCCCCCceEEEEee-CCeeEEEeecCCCCCCCceeEEEEEeeccc------cCceEecccccce
Q psy12060 761 STVGKISTKTTVIVEGPPGLPGGVQVVEVH-KTSATIQWTDGATNGRPITHYKIIARTNWN------STWFNVSEHVIGK 833 (978)
Q Consensus 761 n~~G~~s~~~~l~v~~~P~~P~~~~~~~~~-~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~------~~w~~~~~~~~~~ 833 (978)
+..+.....+.|.+..+|++|.++.+.... .++++++|.++.+.+.+ +.|.|+|+.... ..|..+..
T Consensus 82 ~~~~~~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~-~~Y~l~~~~~~~~~~~~~~~~~~~~~----- 155 (313)
T 2d9q_B 82 GNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLP-TSFTLKSFKSRGNCQTQGDSILDCVP----- 155 (313)
T ss_dssp SSSEEEEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSC-CEEEEEEEECCTTSCSCCCCEEEECC-----
T ss_pred CCCceeEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCc-eeEEEEEEecCCCcccCCcccccCCC-----
Confidence 766666677889999999999999987773 68999999999886655 569999986532 12322211
Q ss_pred eeeecCCceeeEE--eeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeeccc------ccCcEEEE
Q psy12060 834 EVDRYTGRKEASI--ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG------KIGDLSIS 905 (978)
Q Consensus 834 ~~~~~~~~~~~~~--~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~------~~~si~v~ 905 (978)
..+....++ .+ |.+++.|.|+|.|.|..|.+..+. . .+.+.+.+++.+|.++.+... ..++|.|+
T Consensus 156 ----~~~~~~~~~~~~~-L~~~~~Y~f~V~A~N~~G~~~s~~-~-~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~ 228 (313)
T 2d9q_B 156 ----KDGQSHCSIPRKH-LLLYQNMGIWVQAENALGTSMSPQ-L-CLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLS 228 (313)
T ss_dssp ----CTTCSEEEEEGGG-CCSSSCEEEEEEEEETTEEEECCC-E-EECGGGGEECCCCEEEECCC-------CCSCEEEE
T ss_pred ----CCCCcEEEECccc-cccceeEEEEEEEECCCCCccCcc-E-EEehhheeccCcCceeEEEEecccccCCCCeEEEE
Confidence 112233344 46 999999999999999999975333 2 355555566789999998876 56899999
Q ss_pred EEeCCCCCCCCCcceEEEEEE-ecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 906 WEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 906 W~~p~~~~~~g~i~~Y~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
|++|+ ..++.+++|+|+|+ ..+...|....... .....+.|.+|.|++.|.|+|+|.|.+|.|++|+
T Consensus 229 W~~p~--~~~~~~l~Y~v~y~~~~~~~~w~~~~~~~---~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~ 296 (313)
T 2d9q_B 229 WEPWQ--PGLHINQKCELRHKPQRGEASWALVGPLP---LEALQYELCGLLPATAYTLQIRCIRWPLPGHWSD 296 (313)
T ss_dssp EECCG--GGTTSCEEEEEEEEESSSCCCCEEEEEEC---SCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCC
T ss_pred ECCCC--CCCceeEEEEEEEccCCCCCCcEEccccc---CcceEEEEeCCCCCCeEEEEEEeeECCCCCccCC
Confidence 99953 34555689999999 67777887653221 1234577999999999999999999999998664
No 68
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.96 E-value=2.2e-30 Score=302.93 Aligned_cols=517 Identities=14% Similarity=0.102 Sum_probs=303.3
Q ss_pred CCCCCCCcEEEEEEEe-------ecCCCeeEEEEcCccCCCCce--eeecccEEEeCCCCCCCCeEEEEEEEeCCCce--
Q psy12060 409 EAPKAGDKVRLECVAF-------GYPVPSYNWTRRGSPLPRNAY--FENFNRILTIPNVKVEDQGEYICRASNDRSAL-- 477 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~-------g~p~~~v~W~~~~~~l~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-- 477 (978)
..+..|++++|.|.+. +.+.+.|.|++++..++.... .......|+|.++...|+| |.|.+... |..
T Consensus 13 ~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~~~~~~~~~~~l~i~~~~~~~~~-y~C~~~~~-~~~~~ 90 (589)
T 3l5h_A 13 PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQ-LTCNILTF-GQLEQ 90 (589)
T ss_dssp CCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGGCBCCSSSCCBCCCCCCCSSCCC-CCCC-CCT-TCC-C
T ss_pred CEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHHccccCCcEeEEEEecCCCccee-eEEecccC-CCccc
Confidence 4567899999999997 667789999999988764432 1223467999999988765 77987632 221
Q ss_pred -EEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCC--CCCC----CCCCcEEEe---cC
Q psy12060 478 -ESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE--TLPL----EDQDRYFIQ---DN 547 (978)
Q Consensus 478 -~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~--~~~~----~~~~~~~~~---~~ 547 (978)
...+.|.|..+ .+....|.|...+.....+.|.......... .+.. ......... ..
T Consensus 91 ~~~~~~l~v~~p-------------P~~P~nl~c~~~~~~~~~~~W~~~~~~~~~~~y~l~~~~~~~~~~~c~~~~~~~~ 157 (589)
T 3l5h_A 91 NVYGITIISGLP-------------PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPT 157 (589)
T ss_dssp CCCCCCCCC-CC-------------CCCCEEEEEEEETTSCEEEEEECCSCCSSCEEEEECCBCSSSBCCCEECBTTBSS
T ss_pred EEEeEEEeccCC-------------CCCCEeeEEEECCCceEEEEECCCCcCCcCceEEEEEEEcCCCcccCCCCCCCcE
Confidence 12223333332 3455678898877677888887632110000 0000 000000000 11
Q ss_pred EEEEE-eCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCccee--ecCCCeEEEEEeeccC---CCC--e
Q psy12060 548 VLTIR-YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY--AGEGGNVTIFCNPEAA---PKP--K 619 (978)
Q Consensus 548 ~l~i~-~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~--~~~g~~~~l~C~~~~~---p~~--~ 619 (978)
...+. .+.. ...-.|+|.|.|..|..... .+.+..........|....+. ......+.|.+..... +.. .
T Consensus 158 ~c~~~~~l~~-~~~Y~~~v~a~n~~G~~~s~-~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~ 235 (589)
T 3l5h_A 158 SCTVDYSTVY-FVNIEVWVEAENALGKVTSD-HINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYN 235 (589)
T ss_dssp CCBCCSCCCS-SSCEEECEEEEESSCCBCCC-CEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEE
T ss_pred EEEECCCCch-heeEEEEEEEEeCCCCcccc-cEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEE
Confidence 22232 2222 33456779999998875322 122210000001111111110 1234567787764321 111 3
Q ss_pred eEEeeCCEE-ecCCCc-EEEeecCcEEEccccCCCCEEEEEEEEeCCceeee---eEEEEEEeCCceeeeCCCceE----
Q psy12060 620 FVWKKDGNI-IGSGGR-RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES---KGRLIVLHGPSYYEQLPPKIT---- 690 (978)
Q Consensus 620 i~W~~~g~~-~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~---~~~l~v~~~p~~~~~~~~~~~---- 690 (978)
|.|...+.. ...-.. ........+.+.++.......++.+|.|..|.... +..+.+...+..+...+....
T Consensus 236 v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~ 315 (589)
T 3l5h_A 236 IQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDP 315 (589)
T ss_dssp EEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCS
T ss_pred EEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeec
Confidence 444443211 000000 00001234789999999899999999998876432 122222222211112222111
Q ss_pred --EEccccEEEEEEeee-----cCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCC
Q psy12060 691 --IAAHRNLQLRCSAHT-----EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 763 (978)
Q Consensus 691 --~~~g~~~~l~C~~~~-----~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~ 763 (978)
......+.|.|.... .+...+.+.|...+... .........+++ +.....+.+++.|.|..
T Consensus 316 ~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~~----------~~~~~~~~~~~~--l~~~~~Y~~~V~A~n~~ 383 (589)
T 3l5h_A 316 SHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHL----------QNYTVNATKLTV--NLTNDRYLATLTVRNLV 383 (589)
T ss_dssp CSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSCC----------CBCCCSSSCCEE--CCCSSCCCEEEEEEBTT
T ss_pred CcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCCc----------eeeccCCceEEE--EeCCCCEEEEEEEEeCC
Confidence 123467888887421 11223445554433211 111222334444 44566778888999999
Q ss_pred CceeeeEEEEEc---CCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeecccc-----CceEecccccceee
Q psy12060 764 GKISTKTTVIVE---GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-----TWFNVSEHVIGKEV 835 (978)
Q Consensus 764 G~~s~~~~l~v~---~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~-----~w~~~~~~~~~~~~ 835 (978)
|....+...... .+|.||.++.+... ++++.|+|.+|.. .+.+|.|+|+..... .|.....
T Consensus 384 G~~~~s~~~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~~---~i~~Y~v~~~~~~~~~~~~~~~~~~~~------- 452 (589)
T 3l5h_A 384 GKSDAAVLTIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE---SVKKYILEWCVLSDKAPCITDWQQEDG------- 452 (589)
T ss_dssp BCCCCCCCCCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCSS---CCSCBCCEEEEECSSSCCCEEECCBCS-------
T ss_pred ccCCCeEEEeecccccCCCCcceEEEEEC-CCeEEEEEECCCC---CccEEEEEEEECCCCCCCccCcEEeeC-------
Confidence 965544221111 24566678887654 6899999999865 689999999886542 2322211
Q ss_pred eecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCC
Q psy12060 836 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 915 (978)
Q Consensus 836 ~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~ 915 (978)
.....+++.+ |.|++.|.|+|.|.|..|.|.++.. .+.|.+.+|..+| ++.+...+.++|.|+|++|++.+.|
T Consensus 453 ---~~~~~~~~~~-L~p~t~Y~~~V~A~~~~g~g~~~~~--~~~t~~~~P~~pp-~l~~~~~~~~sv~l~W~~~~~~~~~ 525 (589)
T 3l5h_A 453 ---TVHRTYLRGN-LAESKCYLITVTPVYADGPGSPESI--KAYLKQAPPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQN 525 (589)
T ss_dssp ---SCCEEECCSC-CCSSSEEEEEECBEETTEECCCEEE--EEESSCCCCSSCC-CCCEECCCSSCBEEBCCCCCHHHHC
T ss_pred ---CcceEEehhc-cccCcEEEEEEEEEeCCcccCCEEE--EEEeccCCCCCCC-eEEEeecccceEEEEecCCCHHHcC
Confidence 1234455678 9999999999999999999988643 4567788886655 7888889999999999998888999
Q ss_pred CCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 916 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 916 g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
|.|++|+|+|+..+...|... . ..+ ...+.|.+|.|++.|.|+|+|.|.+| |++|++
T Consensus 526 g~i~~Y~v~~~~~~~~~~~~~-~--~~~--~~~~~~~~L~p~t~Y~~~V~A~n~~G-~~~S~~ 582 (589)
T 3l5h_A 526 GFIRNYTIFYRTIIGNETAVN-V--DSS--HTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPE 582 (589)
T ss_dssp SCEEEEEECCBCSSCCCCCEE-E--CTT--CCBCCBCSCCSSCCEECCEEEEETTE-EEECCC
T ss_pred ccceeEEEEEEeCCCCeEEEE-e--CCc--ccEEEecCCCCCCEEEEEEEEEeCCC-CCCCCC
Confidence 999999999998776655321 1 112 23467999999999999999999999 888863
No 69
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.96 E-value=6.7e-30 Score=272.19 Aligned_cols=273 Identities=16% Similarity=0.162 Sum_probs=188.4
Q ss_pred ccCcEEEEEEeec-CCCCeEEEEEcccccccccc-------cccCCCCCCceEe-----ecceEEEeCCCCCCCCeEEEE
Q psy12060 208 ILNDITLSCYAGG-YPNPSYEWFKEDYVQDRLVA-------NLIDPLSDKRFTL-----SGGNLIINDPRQVEDRGSYHC 274 (978)
Q Consensus 208 ~g~~~~l~C~~~g-~p~~~v~W~~~~~~~~~~~~-------~~~~~~~~~~~~~-----~~~~l~i~~~~~~~d~G~Y~C 274 (978)
+|++++|.|.+.+ .|.+.|+|+|++........ ..+......|+.. .+++|.|.++ +.+|+|.|+|
T Consensus 13 ~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v-~~~D~G~Y~C 91 (308)
T 4fom_A 13 WGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNI-GFSDSGKYIC 91 (308)
T ss_dssp TTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSC-CGGGCEEEEE
T ss_pred cCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccC-CHHHCEEEEE
Confidence 4778999999874 44468999998754322110 1111222334333 2457999998 8999999999
Q ss_pred EEEeCceeEEeEEEEEEEeeecccccC--CCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccc--eEEEeeC
Q psy12060 275 KASNKFGSIISESVQLAFGFIGEFNLK--RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK--RVFVSYD 350 (978)
Q Consensus 275 ~a~n~~g~~~s~~~~l~v~~~~~~~~~--~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~--~~~~~~~ 350 (978)
+|.|..+...+..+.+.+...+..... +.......++.+.|.|.+..|.|.+.|+|+|++.++...... .......
T Consensus 92 ~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 171 (308)
T 4fom_A 92 KAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATII 171 (308)
T ss_dssp EEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEE
T ss_pred EEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeeccccc
Confidence 999875444456666766655543322 222233445668899987778999999999998775321100 0001112
Q ss_pred CcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCC-
Q psy12060 351 GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP- 429 (978)
Q Consensus 351 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~- 429 (978)
+.|.|..+..+|+|.|+|.|.|..+..... ..+.|.|..+|...... .....+.+|+.++|.|.+.|.|.|
T Consensus 172 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~-~~~~l~V~~~P~~~~~~-------~~~~~~~~g~~v~l~C~~~g~P~p~ 243 (308)
T 4fom_A 172 SQYKLFPTRFARGRRITCVVKHPALEKDIR-YSFILDIQYAPEVSVTG-------YDGNWFVGRKGVNLKCNADANPPPF 243 (308)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTCSSCEE-EEEECCCCEEEEECCBC-------CCSCEETTCCSCEEECCEEEESCEE
T ss_pred ccceEEeeeecCCccEEEEEEccCCCCceE-EeEEEEEecCCeeEEcc-------cceeeeeccccEEEEEEEecCCCCc
Confidence 358999999999999999999976543322 23455565544322111 112345689999999999999988
Q ss_pred eeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeece
Q psy12060 430 SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 490 (978)
Q Consensus 430 ~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 490 (978)
.|+|+|++..++.... ...+..|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++|.
T Consensus 244 ~v~W~k~~~~~~~~~~-~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 244 KSVWSRLDGQWPDGLL-ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp EEECCBSSSCCCSSCB-CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEEEEECCeECCCcEE-EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 6999999998876543 33455677899999999999999999999999999999999885
No 70
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=1.1e-29 Score=271.50 Aligned_cols=259 Identities=19% Similarity=0.278 Sum_probs=200.6
Q ss_pred CCCCCCcEEEEEEEeecC-CCeeEEEEcCccCC----CCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYP-VPSYNWTRRGSPLP----RNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p-~~~v~W~~~~~~l~----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 484 (978)
.+.+|++++|.|.+.+.| .+.|+|+|++..+. ...++...+..|.|.+++.+|+|.|+|.|.|..|.....+.+.
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~ 95 (315)
T 1itb_B 16 VSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 95 (315)
T ss_dssp EEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCE
T ss_pred EEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEE
Confidence 567999999999999877 78999999987543 2334444567899999999999999999999988877776666
Q ss_pred EEe-eceeeccC---CcccccCCCceeEEEEe------ecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeC
Q psy12060 485 IQA-EPNFTIPL---TDKHMDNQADLTWTCEA------FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554 (978)
Q Consensus 485 V~~-~p~~~~~~---~~~~~~~g~~~~l~C~~------~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 554 (978)
|.. +|.+...+ ....+..|+++.|.|.+ .|.|.+.+.|+|+|..+.. ...++....+.|.|.++
T Consensus 96 v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~------~~~~~~~~~~~L~i~~v 169 (315)
T 1itb_B 96 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL------DNIHFSGVKDRLIVMNV 169 (315)
T ss_dssp EECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCC------CSSSEEEETTEEEESSC
T ss_pred EeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCC------ccceEeecCceEEEEec
Confidence 553 44443222 22457889999999998 7889999999999999864 23455667789999999
Q ss_pred CCCCCCeEEEEEEE-cCCCceee---EEEEEEEE----cCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCC
Q psy12060 555 NPERDPAMYQCRAK-NQLKTRYS---SAQLRVLT----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 626 (978)
Q Consensus 555 ~~~~d~G~Y~C~a~-n~~g~~~~---~~~l~v~~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g 626 (978)
.. +|+|.|+|.|. |..|.... ...+.+.. .+|.+... ......+..|+.++|.|.+.|.|.|.+.|+++|
T Consensus 170 ~~-~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g 247 (315)
T 1itb_B 170 AE-KHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP-ANETMEVDLGSQIQLICNVTGQLSDIAYWKWNG 247 (315)
T ss_dssp CG-GGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSC-CSEEEECCSSSCEEEEEEEEECTTSEEEEEETT
T ss_pred ee-hhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecC-CCCcEEEeCCCcEEEEEEEecCCCCeeEEEECC
Confidence 96 99999999999 77776632 33343331 34544432 223356889999999999999999999999999
Q ss_pred EEecCCCcEEE-----e----------ecCcEEEccccCCC-CEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 627 NIIGSGGRRKI-----F----------ENGNLLISPVSRDD-SGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 627 ~~~~~~~~~~~-----~----------~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
..+........ . ..+.|.|.++..+| +|.|+|.|.|..|.....+.|.|.
T Consensus 248 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 248 SVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp EECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred EECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 99876542111 1 12369999999999 999999999999999988888763
No 71
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.96 E-value=2.5e-29 Score=268.71 Aligned_cols=252 Identities=17% Similarity=0.252 Sum_probs=191.3
Q ss_pred CCCCCCcEEEEEEEe-ecCCCeeEEEEcCccCCCCceeee----cccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEE
Q psy12060 410 APKAGDKVRLECVAF-GYPVPSYNWTRRGSPLPRNAYFEN----FNRILTIPNVKVEDQGEYICRASNDRSALESSVTIS 484 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~l~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 484 (978)
.+.+|+.++|.|... +.|.+.|+|+|++..+....++.. ....|.|.+++.+|+|.|+|.|.|..|... ++.|.
T Consensus 12 ~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~ 90 (312)
T 2y23_A 12 NVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLID 90 (312)
T ss_dssp EECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEEC
T ss_pred EEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEE
Confidence 456899999999886 688999999999999976554322 226899999999999999999999888554 56666
Q ss_pred EEe------------eceeeccCC-cccccCCCceeEEEEee-cCCCCeeEEeECCEECCCCCCCCCCCCcEEEec----
Q psy12060 485 IQA------------EPNFTIPLT-DKHMDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD---- 546 (978)
Q Consensus 485 V~~------------~p~~~~~~~-~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~---- 546 (978)
|.. +|.+...+. ...+.+|+++.|.|.+. +.|.+.+.|+++|..+... .++.+..
T Consensus 91 v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~-------~~~~~~~~~~~ 163 (312)
T 2y23_A 91 EEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG-------PKYKMHIDRNT 163 (312)
T ss_dssp HHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSS-------SSCEEEEETTT
T ss_pred EeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeC-------CcEEEEEccCC
Confidence 653 555444332 66789999999999999 8899999999999998732 3332221
Q ss_pred C--EEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEE--------------------EcCCccccCCCCcceeecCCC
Q psy12060 547 N--VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL--------------------TLKPSFKKRPLESETYAGEGG 604 (978)
Q Consensus 547 ~--~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~--------------------~~~p~~~~~~~~~~~~~~~g~ 604 (978)
+ .|.|.++.. +|+|.|+|.+.+..+... ..+.+. ..+|.+... ....+.+|+
T Consensus 164 ~~~~L~i~~~~~-~d~G~Y~C~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~v~~G~ 237 (312)
T 2y23_A 164 GIIEMFMEKLQD-EDEGTYTFQLQDGKATNH--STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY---LSWEVTGEC 237 (312)
T ss_dssp TEEEEEESCCCG-GGCEEEEEEEESSSCEEE--EEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE---EEEEEETTT
T ss_pred CEEEEEEccCCc-ccCEeEEEEEEeCCceEE--EEEEEcchhhhhhcccccccccchhhccCCceeec---ceEEEeCCC
Confidence 1 399999986 999999999987544332 223221 012333211 124578999
Q ss_pred eEEEEEeeccCCCC-eeEEeeCCEEecCCCcEEEeec-CcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEE
Q psy12060 605 NVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675 (978)
Q Consensus 605 ~~~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~-~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 675 (978)
.+.|.|.+.+.|.| .+.|+++|..+..+.++.+... +.|.|.++..+|+|.|+|.|.|..|....++.|.+
T Consensus 238 ~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 238 NVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp EEEEEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred EEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 99999999999988 9999999999886555554433 47999999999999999999999999998888765
No 72
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.96 E-value=4.9e-29 Score=267.07 Aligned_cols=271 Identities=20% Similarity=0.287 Sum_probs=205.1
Q ss_pred eceeeccCCcccccCCCceeEEEEeecC-CCCeeEEeECCEECCCCCCCCCCCCcEEE--ecCEEEEEeCCCCCCCeEEE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQ 564 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~g~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~ 564 (978)
+|.|..+. +..+.+|++++|.|.+.+. |.+.+.|+|+|..+... .++.+ ....|.|.++.. +|+|.|+
T Consensus 7 ~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~-------~~~~~~~~~~~L~i~~~~~-~d~G~Y~ 77 (317)
T 2y25_A 7 GPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD-------EKHDFKDGICTLLITEFSK-KDAGIYE 77 (317)
T ss_dssp CCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCS-------CC-----CCEEEEETTCCS-TTCSCEE
T ss_pred CCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCC-------CcEEEECCeEEEEEccCCc-ccCeEEE
Confidence 56665443 4678999999999999887 78999999999988732 22222 234899999986 9999999
Q ss_pred EEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeecc----------CCCCeeEEeeCCEEecCCCc
Q psy12060 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA----------APKPKFVWKKDGNIIGSGGR 634 (978)
Q Consensus 565 C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~~~i~W~~~g~~~~~~~~ 634 (978)
|.+.|..|.......+.|.. +|.+...+ ....+..|+.+.|.|.+.+ .|.+.+.|+++|..+....+
T Consensus 78 C~~~n~~g~~~~~~~l~v~~-~~~~~~~~--~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~ 154 (317)
T 2y25_A 78 VILKDDRGKDKSRLKLVDEA-FKELMMEV--CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDR 154 (317)
T ss_dssp EEEESSSCEEEEEECCSTHH-HHHHHHHH--HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSS
T ss_pred EEEECCCCcEEEEEEEEEec-CccccccC--CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCC
Confidence 99999988766554444432 12221111 1223557788888888776 68899999999999988777
Q ss_pred EEEeecCc---EEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEe--------------------CCceeeeCCCceEE
Q psy12060 635 RKIFENGN---LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH--------------------GPSYYEQLPPKITI 691 (978)
Q Consensus 635 ~~~~~~~~---l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~--------------------~p~~~~~~~~~~~~ 691 (978)
..+...+. |.|.+++.+|+|.|+|.|.|..|.......+.+.. .|.+....+....+
T Consensus 155 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 234 (317)
T 2y25_A 155 VKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTI 234 (317)
T ss_dssp EEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEE
T ss_pred eEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEE
Confidence 76655443 99999999999999999999999888777776531 34444445566789
Q ss_pred EccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecC-C--ceEEEeccCCCCCEEEEEEEEcCCCceee
Q psy12060 692 AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-G--GLLEITNASFADAGEYECVVKSTVGKIST 768 (978)
Q Consensus 692 ~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~-~--~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~ 768 (978)
..|+.+.|.|.+.+.|.+. +.|+++|..+..... ..+... + ..|.|.++..+|+|.|+|.|.|..|..+.
T Consensus 235 ~~g~~~~l~C~~~g~p~p~--i~W~~~g~~~~~~~~-----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 307 (317)
T 2y25_A 235 QEGKALNLTCNVWGDPPPE--VSWLKNEKALASDDH-----CNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETS 307 (317)
T ss_dssp ETTSBBCEEEEEECSSCCE--EEEEESSSEECCCSS-----EEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEE
T ss_pred EcCCEEEEEEEEecCCCCE--EEEEECCEeCCCCCc-----EEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEE
Confidence 9999999999999988764 699999988864321 122222 1 38999999999999999999999999999
Q ss_pred eEEEEEcCC
Q psy12060 769 KTTVIVEGP 777 (978)
Q Consensus 769 ~~~l~v~~~ 777 (978)
++.|.|..|
T Consensus 308 ~~~l~V~~P 316 (317)
T 2y25_A 308 DFTVSVFIP 316 (317)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEcC
Confidence 999998754
No 73
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=3.1e-29 Score=270.64 Aligned_cols=276 Identities=20% Similarity=0.346 Sum_probs=142.0
Q ss_pred CCcccccCCCceeEEEEeecC-CCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 495 LTDKHMDNQADLTWTCEAFGV-PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 495 ~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
+....+.+|++++|.|.+.+. |.+.+.|+|+|..+. ...++.+.++.|.|.++.. +|+|.|+|.+.|. |.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~-------~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~-~~ 85 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLV-------PSERVLVGPQRLQVLNASH-EDSGAYSCRQRLT-QR 85 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCC-------CcccEEeccceEEEeeccc-ccCEEEEEEEEeC-Ce
Confidence 666788999999999999876 678999999998876 3345555677899999996 9999999999998 66
Q ss_pred eeeEEEEEEEEc---------------------CCccccCC--CCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEec
Q psy12060 574 RYSSAQLRVLTL---------------------KPSFKKRP--LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 630 (978)
Q Consensus 574 ~~~~~~l~v~~~---------------------~p~~~~~~--~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~ 630 (978)
......|.|... +|.+.... ......+.+|+.+.|.|.+.|.|.+.+.|+++|..+.
T Consensus 86 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~ 165 (334)
T 1ry7_B 86 VLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFR 165 (334)
T ss_dssp ---------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCC
T ss_pred EEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECc
Confidence 666666666542 22222111 1123457899999999999999999999999998887
Q ss_pred CCCcEE---E-eecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCC----ceeeeCCCceEEEccccEEEEEE
Q psy12060 631 SGGRRK---I-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP----SYYEQLPPKITIAAHRNLQLRCS 702 (978)
Q Consensus 631 ~~~~~~---~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p----~~~~~~~~~~~~~~g~~~~l~C~ 702 (978)
...+.. . ....+|.|.++..+|+|.|+|.|.|..|.....+.|.|...+ .+....+....+..|+.+.|.|.
T Consensus 166 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~ 245 (334)
T 1ry7_B 166 GEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCK 245 (334)
T ss_dssp TTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCC
T ss_pred ccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEE
Confidence 554321 1 123469999999999999999999999998888899887633 22222346678899999999999
Q ss_pred eeecCCcCeEEEEee----CCEEcccccccc---ccCCee---ecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEE
Q psy12060 703 AHTEELLDVAYIWTH----NGVRIGNMDLNE---LETPNI---NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772 (978)
Q Consensus 703 ~~~~p~~~~~~~W~~----~g~~~~~~~~~~---~~~~~~---~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l 772 (978)
+.+.|.+ .+.|++ +|..+....... ...... ......|.|.++..+|+|.|+|.|.|..|..+.++.|
T Consensus 246 ~~g~p~p--~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 323 (334)
T 1ry7_B 246 VYSDAQP--HIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWL 323 (334)
T ss_dssp CBCSSCE--EEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEE
T ss_pred EecCCCC--eEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEE
Confidence 9998776 568999 666654321100 000000 1112489999999999999999999999999999999
Q ss_pred EEcCCCCCC
Q psy12060 773 IVEGPPGLP 781 (978)
Q Consensus 773 ~v~~~P~~P 781 (978)
.|..+|.+.
T Consensus 324 ~V~~~~~~~ 332 (334)
T 1ry7_B 324 VVLPAEEEL 332 (334)
T ss_dssp EEECSCCC-
T ss_pred EEEECCCCc
Confidence 998776543
No 74
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=3.5e-28 Score=256.42 Aligned_cols=270 Identities=17% Similarity=0.153 Sum_probs=192.5
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (978)
+|.|...|.+..+. +|+.++|.|.+.| .|.|++++.... .......+++|.|.++ +.+|
T Consensus 4 ~p~i~~~~~~~~v~-----~G~~v~L~C~~~~----~v~W~~~~~~~~-----------~~~~~~~~~~L~i~~~-~~~d 62 (289)
T 3ejj_X 4 APVIEPSGPELVVE-----PGETVTLRCVSNG----SVEWDGPISPYW-----------TLDPESPGSTLTTRNA-TFKN 62 (289)
T ss_dssp CCEEESCSSEEEEC-----TTCCEEEEEECSS----CCEEECSCSSSS-----------EECCCSSCCEEEESSC-CGGG
T ss_pred CcEecCCCceEEEC-----CCCCEEEEEEeCC----cEEEccCCCceE-----------EEeccCCccEEEEeee-cccc
Confidence 57777777777654 4567999999987 499998874211 0111123468999997 8999
Q ss_pred CeEEEEEEEeCceeEEeEEEEEEEeeecc-cccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEec-ccccccccccceE
Q psy12060 269 RGSYHCKASNKFGSIISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWAR-DYFPNFVEEDKRV 345 (978)
Q Consensus 269 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~-~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~-~~~~~~~~~~~~~ 345 (978)
+|.|+|.|.|..|. .+..+.|.|..++. +........+..|+.+.|.|.+. +.+.+ .+.|++ ++.. +....++
T Consensus 63 ~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~-~~~~~~~v~W~~~~~~~--~~~~~~~ 138 (289)
T 3ejj_X 63 TGTYRCTELEDPMA-GSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLIT-DPALKDSVSLMREGGRQ--VLRKTVY 138 (289)
T ss_dssp CEEEEEECCC------CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEES-CGGGGGSEEEEEGGGEE--CCTTCCE
T ss_pred CEEEEEEEeccCCc-ceeEEEEEEeCCCcceecccceEEEecCCceEeEEEcc-CCCcceEEEEEecCCee--cCCCccE
Confidence 99999999998876 46778888876654 33344556778899999999985 44444 599986 4443 2345566
Q ss_pred EEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCC-ccccccCCCCCCCCCCCCCCCCcEEEEEEEe
Q psy12060 346 FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN-FQQLKFPNNFPKTFPEAPKAGDKVRLECVAF 424 (978)
Q Consensus 346 ~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~-~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~ 424 (978)
.+..++.|.|.+++.+|+|.|+|.|.+... +..+..+.|.|...+. .+.+...+ ....+.+|+.++|.|.+.
T Consensus 139 ~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~--~~~~~~~~l~V~~~~~~~p~i~~~~-----~~~~~~~g~~~~l~C~~~ 211 (289)
T 3ejj_X 139 FFSPWRGFIIRKAKVLDSNTYVCKTMVNGR--ESTSTGIWLKVNRVHPEPPQIKLEP-----SKLVRIRGEAAQIVCSAT 211 (289)
T ss_dssp EEETTTEEEESSCCGGGCEEEEEEEEETTE--EEECCCEEEEEESSCCCCCEEEEES-----SSEECCSSSCEEEEEEEE
T ss_pred EECCCCCEEEeecccccCEEEEEEEEeCCC--ccccccEEEEEEECCCCCCeEEecC-----CceEEEeCCcEEEEEEeC
Confidence 777788999999999999999999995432 3344557888874211 11111111 123456899999999999
Q ss_pred e-cCCCeeEEEEcCccCCCCcee------eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeece
Q psy12060 425 G-YPVPSYNWTRRGSPLPRNAYF------ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 490 (978)
Q Consensus 425 g-~p~~~v~W~~~~~~l~~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 490 (978)
+ .|.+.|.|++++..+...... ......|.|.+++.+|+|.|+|.|.|..|..+.++.|.+..++.
T Consensus 212 ~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 212 NAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp ESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC----
T ss_pred CCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEeccc
Confidence 8 789999999999988654322 12356899999999999999999999999999999998876653
No 75
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.96 E-value=2.9e-29 Score=271.32 Aligned_cols=280 Identities=16% Similarity=0.185 Sum_probs=205.9
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEee-------cCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEE
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAG-------GYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLII 260 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~-------g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 260 (978)
..|.|...|.+..+.+ |+.++|.|.+. +.|.+.|.|+|+|..+. +......++...+++|.|
T Consensus 17 ~~p~~~~~~~~~~v~~-----G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~------~~~~~~~~~~~~~~~L~i 85 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLE-----GEPVALRCPQVPYWLWASVSPRINLTWHKNDSART------VPGEEETRMWAQDGALWL 85 (339)
T ss_dssp -CEEEEECSCCEEEET-----TBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSC------CSCCSSSCEEEETTEEEE
T ss_pred hhHhhCcCceEEEEEC-----CccEEEEeccccccccccCCCCceEEEEECCCCcc------cCccccccEEeeCCeEEE
Confidence 4588999998888654 55699999998 99999999999986531 112224566677889999
Q ss_pred eCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccc--cCCCCeeeecccCeEEEeCC----CCCCCCceEEEeccc
Q psy12060 261 NDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFN--LKRAPEIGNQNWGKAMFCDP----PTNYPGVNYYWARDY 334 (978)
Q Consensus 261 ~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~--~~~~~~~~~~~~~~~l~C~~----~~~~p~~~i~W~~~~ 334 (978)
.++ +.+|+|.|+|.|.|..|.. +..+.|.|...+... ....+..+..|+.++|.|.+ ..+.|.+.|.|+|+|
T Consensus 86 ~~v-~~~D~G~Y~C~~~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g 163 (339)
T 3o4o_C 86 LPA-LQEDSGTYVCTTRNASYCD-KMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDS 163 (339)
T ss_dssp SSB-CTTCCEEEECCEEETTEEE-EEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESS
T ss_pred CCC-CcccCEEEEEEEECCcceE-EEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCC
Confidence 997 8999999999999998854 466777776655432 22334567889999999994 377889999999999
Q ss_pred ccccccccceEEEeeC-CcEEEeeeeeecceeeEEEEEeeccccc-ccCCceeEEEccCCCc--cccccCCCCCCCCCCC
Q psy12060 335 FPNFVEEDKRVFVSYD-GALYFSALEQIDAGNYSCNVQSKVSDTG-RNGPFFPLKVFPHSNF--QQLKFPNNFPKTFPEA 410 (978)
Q Consensus 335 ~~~~~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~~~n~~~~~~-~~~~~~~l~V~~~~~~--~~~~~~~~~~~~~~~~ 410 (978)
..+... ..++....+ +.|.|.+++.+|+|.|+|.|.|..+... ..+..+.|.|...+.. +.+..+ .....
T Consensus 164 ~~~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~-----~~~~~ 237 (339)
T 3o4o_C 164 LLLDKD-NEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISP-----LKTIS 237 (339)
T ss_dssp CBCCTT-CSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCC-----SCCCC
T ss_pred eeCCCC-CceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecC-----CceeE
Confidence 876433 244444443 5899999999999999999999876432 2234477888754321 111111 12346
Q ss_pred CCCCCcEEEEEEE---eecC-CCeeEEEEcCccCCCCc---------ee-eeccc------EEEeCCCCCCCC-eEEEEE
Q psy12060 411 PKAGDKVRLECVA---FGYP-VPSYNWTRRGSPLPRNA---------YF-ENFNR------ILTIPNVKVEDQ-GEYICR 469 (978)
Q Consensus 411 v~~G~~~~l~C~~---~g~p-~~~v~W~~~~~~l~~~~---------~~-~~~~~------~L~i~~~~~~d~-G~Y~C~ 469 (978)
+.+|++++|.|.+ .|.| .+.+.|++++..+.... .. ...++ .|.|.+++.+|+ |.|+|.
T Consensus 238 v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~ 317 (339)
T 3o4o_C 238 ASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCV 317 (339)
T ss_dssp CCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEE
T ss_pred eccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEE
Confidence 7899999999999 8888 88999999998764321 10 11112 799999999998 999999
Q ss_pred EEeCCCceEEEEEEEEE
Q psy12060 470 ASNDRSALESSVTISIQ 486 (978)
Q Consensus 470 a~n~~g~~~~~~~l~V~ 486 (978)
|.|..|..+..+.+.+.
T Consensus 318 a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 318 VHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp EEETTEEECCBCCCCC-
T ss_pred EEeccCceEEEEEhhHh
Confidence 99999988776665443
No 76
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=2.5e-28 Score=262.15 Aligned_cols=268 Identities=18% Similarity=0.232 Sum_probs=198.9
Q ss_pred cccccCCCceeEEEEeecC---------CCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCe-EEEEE
Q psy12060 497 DKHMDNQADLTWTCEAFGV---------PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA-MYQCR 566 (978)
Q Consensus 497 ~~~~~~g~~~~l~C~~~~~---------p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G-~Y~C~ 566 (978)
...+.+|+++.|.|.+.+. |.+.|+|+|++..+.. ..+. ...+.|.|.++.. +|+| .|+|.
T Consensus 38 ~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~-------~~~~-~~~~~L~i~~v~~-~D~Gs~Y~C~ 108 (329)
T 3oq3_B 38 NDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRP-------LNRR-VKNGDLWIANYTS-NDSHRRYLCT 108 (329)
T ss_dssp EEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEE-------CSTT-EETTEEEESSCCG-GGGGCCEEEE
T ss_pred eEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccc-------cCce-eecceEEEcCCCh-HhCCCcEEEE
Confidence 3457899999999999874 5689999999877652 1222 5678999999986 8999 99999
Q ss_pred EEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCC-CCeeEEeeCCEEecCCCcEEEeecCcEEE
Q psy12060 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIGSGGRRKIFENGNLLI 645 (978)
Q Consensus 567 a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~~g~~~~~~~~~~~~~~~~l~i 645 (978)
|.|..|.......+.+...+|.+.... ....+.+|+.+.|.|.+.+.| .+.+.|++++..+..........++.|.|
T Consensus 109 a~n~~g~~~~~~~~~v~~~~p~~~~~~--~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I 186 (329)
T 3oq3_B 109 VTTKNGDCVQGIVRSHIRKPPSCIPET--YELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLII 186 (329)
T ss_dssp EECTTSCEEEEEEEEEECCCCSCEEEE--EETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEE
T ss_pred EEeCCCceeeEEEEEEEcCCCcEeccc--cceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEE
Confidence 999988755544444544444432221 122356799999999999999 89999999999986433333333788999
Q ss_pred ccccCCCCEEEEEEEEeC--Cceeeee----EEEEEEeCCce--eeeCCCceEEEccccEEEEEEeeecC--CcCeEEEE
Q psy12060 646 SPVSRDDSGIYSCTATNV--HGMDESK----GRLIVLHGPSY--YEQLPPKITIAAHRNLQLRCSAHTEE--LLDVAYIW 715 (978)
Q Consensus 646 ~~~~~~d~G~Y~C~a~n~--~g~~~~~----~~l~v~~~p~~--~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~~~W 715 (978)
.+++.+|+|.|+|.|.|. .|..... +.|.|..+|.. ....+....+..|+.+.|.|.+.+.| ++.+.+.|
T Consensus 187 ~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W 266 (329)
T 3oq3_B 187 HNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDW 266 (329)
T ss_dssp CSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEE
T ss_pred eecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEE
Confidence 999999999999999997 6555444 67888776621 11256678889999999999999998 44457799
Q ss_pred eeCCEEccccccccccC--CeeecCCceEEEeccCCCCCE-EEEEEEEcCCCceeeeEEEEEc
Q psy12060 716 THNGVRIGNMDLNELET--PNINIDGGLLEITNASFADAG-EYECVVKSTVGKISTKTTVIVE 775 (978)
Q Consensus 716 ~~~g~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~g-~Y~c~a~n~~G~~s~~~~l~v~ 775 (978)
+++|..+.......... .+.......|.|.++..+|+| .|+|.|.|..|..+.++.|.|+
T Consensus 267 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 267 ENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp ECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred EECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEeC
Confidence 99998753221100000 000113568999999999999 9999999999999998888763
No 77
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=7.6e-29 Score=265.07 Aligned_cols=273 Identities=16% Similarity=0.164 Sum_probs=207.0
Q ss_pred cccccCCCceeEEEEeecCC-CCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCcee
Q psy12060 497 DKHMDNQADLTWTCEAFGVP-DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 575 (978)
Q Consensus 497 ~~~~~~g~~~~l~C~~~~~p-~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 575 (978)
...+.+|+++.|.|.+.+.| .+.|.|+|+|..+... .....++....+.|.|.++.. +|+|.|+|.|.|..|...
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~---~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~~~ 89 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVS---TEQASRIHQHKEKLWFVPAKV-EDSGHYYCVVRNSSYCLR 89 (315)
T ss_dssp CCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSC---CCTTSSSEECSSBEECTTCCG-GGCSCCEECCCSSSCCCC
T ss_pred EEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccc---cccCCcEeccCCeEEECCCCh-hhCEEEEEEEeCCceEEE
Confidence 45678999999999999887 8899999998654321 113455666677999999986 999999999999988877
Q ss_pred eEEEEEEEEcCCccccCCCC-cceeecCCCeEEEEEee------ccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccc
Q psy12060 576 SSAQLRVLTLKPSFKKRPLE-SETYAGEGGNVTIFCNP------EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV 648 (978)
Q Consensus 576 ~~~~l~v~~~~p~~~~~~~~-~~~~~~~g~~~~l~C~~------~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~ 648 (978)
....+.+...+|.+...+.. ....+..|+++.|.|.+ .|.|.+.++|+++|..+..+.......++.|.|.++
T Consensus 90 ~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v 169 (315)
T 1itb_B 90 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNV 169 (315)
T ss_dssp EECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSC
T ss_pred EEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEec
Confidence 76677766556665433221 23457889999999998 889999999999999987655445556778999999
Q ss_pred cCCCCEEEEEEEE-eCCceee---eeEEEEEE-----eCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCC
Q psy12060 649 SRDDSGIYSCTAT-NVHGMDE---SKGRLIVL-----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 719 (978)
Q Consensus 649 ~~~d~G~Y~C~a~-n~~g~~~---~~~~l~v~-----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g 719 (978)
+.+|+|.|+|.|. |..|... ..+.+.+. .+|.+.......+.+..|+.+.|.|.+.+.|.|. +.|+++|
T Consensus 170 ~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~--i~W~~~g 247 (315)
T 1itb_B 170 AEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDI--AYWKWNG 247 (315)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSE--EEEEETT
T ss_pred eehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCe--eEEEECC
Confidence 9999999999999 7888763 33445444 3444332222235788999999999999988764 5999999
Q ss_pred EEccccccccccCCeee----------cCCceEEEeccCCCC-CEEEEEEEEcCCCceeeeEEEEEcC
Q psy12060 720 VRIGNMDLNELETPNIN----------IDGGLLEITNASFAD-AGEYECVVKSTVGKISTKTTVIVEG 776 (978)
Q Consensus 720 ~~~~~~~~~~~~~~~~~----------~~~~~l~i~~~~~~d-~g~Y~c~a~n~~G~~s~~~~l~v~~ 776 (978)
..+......... .... .....|.|.++..+| +|.|+|.|.|..|..++++.|.|..
T Consensus 248 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 248 SVIDEDDPVLGE-DYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp EECCTTCSSEEE-EEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred EECCcccccccc-cceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 988653211000 0111 123489999999999 9999999999999999999988753
No 78
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.96 E-value=1.2e-28 Score=267.84 Aligned_cols=277 Identities=14% Similarity=0.223 Sum_probs=171.0
Q ss_pred CCeeeecccCeEEEeCCCCCCC-----------CceEEEeccccccc----cc---ccceEEEeeCCcEEEeeeeeecce
Q psy12060 303 APEIGNQNWGKAMFCDPPTNYP-----------GVNYYWARDYFPNF----VE---EDKRVFVSYDGALYFSALEQIDAG 364 (978)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~~p-----------~~~i~W~~~~~~~~----~~---~~~~~~~~~~~~L~i~~~~~~d~G 364 (978)
....+.+|+.+.|.|.+. +.| .+.|+|+|++.... +. ...++ ...++.|.|.+++.+|+|
T Consensus 15 ~~v~v~~G~~v~L~C~~~-~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~D~G 92 (349)
T 4dep_C 15 RQIQVFEDEPARIKCPLF-EHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRI-SKEKDVLWFRPTLLNDTG 92 (349)
T ss_dssp CCCEEETTSCEEEECTCC-CCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCE-EEETTEEEESSCCGGGCE
T ss_pred eeEEEecCCeEEEEcccc-ccccccccccccCCCceEEEEECCCCCcccccccccccCceE-eecCCEEEEccCChhhCE
Confidence 345678899999999984 444 48999999984211 11 22333 345678999999999999
Q ss_pred eeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEE-----eecCCCeeEEEEcCcc
Q psy12060 365 NYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-----FGYPVPSYNWTRRGSP 439 (978)
Q Consensus 365 ~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~-----~g~p~~~v~W~~~~~~ 439 (978)
.|+|.|.|..+.. ...+.|.|..++.... ..........+.+|+.++|.|.+ .|.|.+.|+|+|++..
T Consensus 93 ~Y~C~a~n~~~~~---~~~~~l~V~~~~~~~~----~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~ 165 (349)
T 4dep_C 93 NYTCMLRNTTYCS---KVAFPLEVVQKDSCFN----SPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYK 165 (349)
T ss_dssp EEEEEEECSSCEE---EEEEEEEEECCCTTSC----CSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEE
T ss_pred EEEEEEecCCceE---EEEEEEEEecCCcccC----cccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEE
Confidence 9999999976432 2346788876553211 11111112356799999999985 6789999999999999
Q ss_pred CCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCC-Cce---EEEEEEEEEe------eceeeccCCcc--cccCCCcee
Q psy12060 440 LPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR-SAL---ESSVTISIQA------EPNFTIPLTDK--HMDNQADLT 507 (978)
Q Consensus 440 l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~-g~~---~~~~~l~V~~------~p~~~~~~~~~--~~~~g~~~~ 507 (978)
+.....+...+..|.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|.. +|.+..++... .+.+|++++
T Consensus 166 l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~ 245 (349)
T 4dep_C 166 IQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELL 245 (349)
T ss_dssp CCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------C
T ss_pred CCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEE
Confidence 97665555566789999999999999999999986 443 5667777776 56665554433 688999999
Q ss_pred EEEEee----cCCCCeeEEeECCEECCCC--CCCCCC------CCcEEEecCEEEEEeCCCCCCC-eEEEEEEEcCCCce
Q psy12060 508 WTCEAF----GVPDVTYSWFRNGELLNSE--TLPLED------QDRYFIQDNVLTIRYLNPERDP-AMYQCRAKNQLKTR 574 (978)
Q Consensus 508 l~C~~~----~~p~~~i~W~~~g~~~~~~--~~~~~~------~~~~~~~~~~l~i~~~~~~~d~-G~Y~C~a~n~~g~~ 574 (978)
|.|.+. +.|.+.+.|+++|..+... ...... ... ......|.|.++.. +|+ |.|+|.|.|..|..
T Consensus 246 l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~-~d~~G~Y~C~a~N~~G~~ 323 (349)
T 4dep_C 246 IPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTED-ETRTQILSIKKVTS-EDLKRSYVCHARSAKGEV 323 (349)
T ss_dssp CCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCC-EEEEECC--------------CEEEEECSSCEE
T ss_pred EEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCC-cEEEEEEEEeeccH-HHcCCcEEEEEEcCCCcE
Confidence 999998 5688999999999887641 110000 001 11234599999986 899 99999999999999
Q ss_pred eeEEEEEEEEcCCccc
Q psy12060 575 YSSAQLRVLTLKPSFK 590 (978)
Q Consensus 575 ~~~~~l~v~~~~p~~~ 590 (978)
...+.|.|...+|.+.
T Consensus 324 ~~~~~l~v~~~~p~~~ 339 (349)
T 4dep_C 324 AKAAKVKQKVPAPRYT 339 (349)
T ss_dssp EEECC-----------
T ss_pred EEEEEEeeecCCCCCc
Confidence 8888888865445443
No 79
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=4.5e-28 Score=251.51 Aligned_cols=242 Identities=19% Similarity=0.211 Sum_probs=184.7
Q ss_pred CeeEeCCCceEecCCCccccCcEEEEEEeecCCCC-eEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCC
Q psy12060 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNP-SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (978)
Q Consensus 190 P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (978)
|.|...|.+..+. +|+.++|.|.+.|.|.+ .++|+|+|..+.. .++.|.|.++ +.+|
T Consensus 2 P~i~~~p~~~~v~-----~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~----------------~~~~l~i~~~-~~~d 59 (262)
T 3rjd_A 2 AVITLQPPWVSVF-----QEETVTLHCEVLHLPGSSSTQWFLNGTATQT----------------STPSYRITSA-SVND 59 (262)
T ss_dssp CEEEESSCCSEEE-----TTCCEEEEEECSSCCCTTCEEEEETTEECSC----------------CSSEEEESSC-CGGG
T ss_pred CeEecCCCcEEee-----CCCeEEEEEECCCCCCCceEEEEECCEEeec----------------cCCeEEEecC-Cccc
Confidence 7788888886654 45669999999999988 9999999865421 2567889887 8999
Q ss_pred CeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEe
Q psy12060 269 RGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVS 348 (978)
Q Consensus 269 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~ 348 (978)
+|.|+|.|.|..++ ..+.|.|..++. ........+.+|+.+.|.|.+..+.|.+.+.|+|++..+. ...
T Consensus 60 ~G~Y~C~~~~~~~s---~~~~l~v~~~~~-~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~-------~~~ 128 (262)
T 3rjd_A 60 SGEYRCQRGLSGRS---DPIQLEIHRGWL-LLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFK-------FFH 128 (262)
T ss_dssp CEEEEEEESSSCCC---CCEEEEEECSSE-EEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEE-------EEE
T ss_pred CeEEEEEEecCCcc---ccEEEEEeccce-EecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccc-------ccC
Confidence 99999999987654 456777665432 2333455677899999999987788889999999987642 122
Q ss_pred eCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCC
Q psy12060 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV 428 (978)
Q Consensus 349 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~ 428 (978)
.++.|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|...+..+.+...+ ...+.+|+.++|.|.+.+.|.
T Consensus 129 ~~~~l~i~~~~~~d~G~Y~C~~~n~~~---~~~~~~~l~V~~~~~~p~~~~~~------~~~~~~g~~~~l~C~~~~~p~ 199 (262)
T 3rjd_A 129 WNSNLTILKTNISHNGTYHCSGMGKHR---YTSAGISVTVKELFPAPVLNASV------TSPLLEGNLVTLSCETKLLLQ 199 (262)
T ss_dssp ECCCEEESSCCGGGCEEEEEEEESSSE---EEEECEEEEEECSSCCCEEEESS------CSSEETTCCEEEEEECCCCCC
T ss_pred CCCeEEEEECChhhCEEEEEEEeCCCC---ccccceEEEeccCCCCCeEeecC------ceeecCCCeEEEEeEcccCCC
Confidence 357899999999999999999998763 33344678887643222222222 235679999999999999876
Q ss_pred -C----eeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCce
Q psy12060 429 -P----SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477 (978)
Q Consensus 429 -~----~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 477 (978)
| .+.|++++..+... .....|.|.+++.+|+|.|+|.|.|..|..
T Consensus 200 ~p~~~~~~~w~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 200 RPGLQLYFSFYMGSKTLRGR----NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp -----EEEEEEETTEEEEEE----ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred CCCccEEEEEEeCCcEeccc----CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 4 37899999877522 345689999999999999999999999975
No 80
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.96 E-value=3.9e-28 Score=251.83 Aligned_cols=240 Identities=21% Similarity=0.294 Sum_probs=184.3
Q ss_pred CCCCCCCcEEEEEEEee-cCCC--eeEEEEcCccCCCCceeeecccEEEeCCC---CCCCCeE--EEEEEEeCCCceEEE
Q psy12060 409 EAPKAGDKVRLECVAFG-YPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNV---KVEDQGE--YICRASNDRSALESS 480 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g-~p~~--~v~W~~~~~~l~~~~~~~~~~~~L~i~~~---~~~d~G~--Y~C~a~n~~g~~~~~ 480 (978)
..+.+|++++|.|.+.| .|.+ +|+|+|++..+.. .....+..|.+..+ +.+|+|. |+|.|.|..|..+..
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~--~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~ 90 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETL 90 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC--EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc--eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEE
Confidence 35679999999999998 7877 9999999999865 33334456666655 7788885 999999999998889
Q ss_pred EEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCC
Q psy12060 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560 (978)
Q Consensus 481 ~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~ 560 (978)
+.|.|...|...+.+....+.+|+.++|.|.+. |.+.++| +|..+... . ....|.|..+.. +|+
T Consensus 91 ~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~-------~----~~~~l~i~~~~~-~~~ 154 (265)
T 2oz4_A 91 QTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL-------G----PRAQLLLKATPE-DNG 154 (265)
T ss_dssp EEEEEECCCCCEEEESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC-------S----SEECCEEECCGG-GTT
T ss_pred EEEEEeCCCCceeecCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC-------C----CcEEEEEccccc-cCC
Confidence 999998744322223455688899999999987 8999999 88777421 1 123577887775 899
Q ss_pred eEEEEEEEcCC-Ccee---eEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEE
Q psy12060 561 AMYQCRAKNQL-KTRY---SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636 (978)
Q Consensus 561 G~Y~C~a~n~~-g~~~---~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~ 636 (978)
|.|+|.|.|.. |... ....|.|.. +|.+.....+....+.+|+.++|.|.+.|.|.|.+.|+++|..+.
T Consensus 155 g~Y~C~a~n~~~g~~~~~s~~~~l~V~~-~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~------ 227 (265)
T 2oz4_A 155 RSFSCSATLEVAGQLIHKNQTRELRVLY-GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPL------ 227 (265)
T ss_dssp EEEEEEEEEECSSSEEEEEEEEEEEEEE-EEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEEC------
T ss_pred ceEEEEEEcCCCCCcccccccEEEEEEe-CCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccC------
Confidence 99999998644 6554 556677764 555544333345668899999999999999999999999987322
Q ss_pred EeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEe
Q psy12060 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677 (978)
Q Consensus 637 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 677 (978)
..+.+. .++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 228 --~~g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 228 --PIGESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp --CTTSCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred --CCCcEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 233433 3788999999999999999999999998864
No 81
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.96 E-value=6.9e-29 Score=264.31 Aligned_cols=264 Identities=19% Similarity=0.265 Sum_probs=192.3
Q ss_pred CCCCCCcEEEEEEEee-cCCCeeEEEEcCccCCCC-----------------cee-----eecccEEEeCCCCCCCCeEE
Q psy12060 410 APKAGDKVRLECVAFG-YPVPSYNWTRRGSPLPRN-----------------AYF-----ENFNRILTIPNVKVEDQGEY 466 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g-~p~~~v~W~~~~~~l~~~-----------------~~~-----~~~~~~L~i~~~~~~d~G~Y 466 (978)
++.+|++++|.|.+.+ .+.+.|+|+|++...... .+. ...+.+|.|.+++.+|+|.|
T Consensus 10 tv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y 89 (308)
T 4fom_A 10 TAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKY 89 (308)
T ss_dssp EEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCEEE
T ss_pred EEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCEEE
Confidence 5678999999999875 444579999976543110 001 11245799999999999999
Q ss_pred EEEEEeC-CCceEEEEEEEEEeeceee--ccCCcccccCCCceeEEEEe-ecCCCCeeEEeECCEECCCCCCCCCCCCcE
Q psy12060 467 ICRASND-RSALESSVTISIQAEPNFT--IPLTDKHMDNQADLTWTCEA-FGVPDVTYSWFRNGELLNSETLPLEDQDRY 542 (978)
Q Consensus 467 ~C~a~n~-~g~~~~~~~l~V~~~p~~~--~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~ 542 (978)
+|.|.|. .|..+..+.+.+...|.+. ..+.......|+.+.|.|.+ .|.|.+.|+|++++..+....... ....
T Consensus 90 ~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~--~~~~ 167 (308)
T 4fom_A 90 ICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSF--PNET 167 (308)
T ss_dssp EEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEEC--TTSC
T ss_pred EEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCccccccccee--eeec
Confidence 9999986 5566777888887766543 34445556788999999985 578999999999998775321111 1111
Q ss_pred EEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEE--EEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCC-e
Q psy12060 543 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA--QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-K 619 (978)
Q Consensus 543 ~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~--~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~ 619 (978)
......|.|..+.. +|+|.|+|.|.|..+...... .|.|.. +|.+...+. ....+..|+.++|.|.+.|.|+| .
T Consensus 168 ~~~~s~l~i~~~~~-~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~-~P~~~~~~~-~~~~~~~g~~v~l~C~~~g~P~p~~ 244 (308)
T 4fom_A 168 ATIISQYKLFPTRF-ARGRRITCVVKHPALEKDIRYSFILDIQY-APEVSVTGY-DGNWFVGRKGVNLKCNADANPPPFK 244 (308)
T ss_dssp EEEEEEEEECCCGG-GTTCEEEEEEECTTCSSCEEEEEECCCCE-EEEECCBCC-CSCEETTCCSCEEECCEEEESCEEE
T ss_pred ccccccceEEeeee-cCCccEEEEEEccCCCCceEEeEEEEEec-CCeeEEccc-ceeeeeccccEEEEEEEecCCCCcE
Confidence 22234688888886 899999999999877654443 444442 455544333 23346788999999999999988 7
Q ss_pred eEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCc
Q psy12060 620 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680 (978)
Q Consensus 620 i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 680 (978)
+.|+|++..+..... ...+..|.|.+++.+|+|.|+|.|.|..|....++.|.|.++|.
T Consensus 245 v~W~k~~~~~~~~~~--~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 245 SVWSRLDGQWPDGLL--ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp EECCBSSSCCCSSCB--CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEEEECCeECCCcEE--EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 999999988765422 12222366889999999999999999999999999999988775
No 82
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.96 E-value=1.8e-26 Score=262.37 Aligned_cols=354 Identities=16% Similarity=0.193 Sum_probs=219.6
Q ss_pred CCeeeecccCeEEEeCCCCCCC-C--ceEEEecc--cccc-cc-------------cccceEEEeeC-----CcEEEeee
Q psy12060 303 APEIGNQNWGKAMFCDPPTNYP-G--VNYYWARD--YFPN-FV-------------EEDKRVFVSYD-----GALYFSAL 358 (978)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~~p-~--~~i~W~~~--~~~~-~~-------------~~~~~~~~~~~-----~~L~i~~~ 358 (978)
....+..|+.++|.|.+..... . ..+.|+|. |... .+ ....|+.+..+ .+|.|.++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 87 (512)
T 1zvo_C 8 GPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSM 87 (512)
T ss_pred CCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcC
Confidence 4567788999999999843222 2 67999986 2221 00 01245555432 37999999
Q ss_pred eeecceeeEEEEEeecc----------cccccCCceeEEEccCCC-ccccccCCCCCCCCCCCCCCCCcEEEEEEEeec-
Q psy12060 359 EQIDAGNYSCNVQSKVS----------DTGRNGPFFPLKVFPHSN-FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY- 426 (978)
Q Consensus 359 ~~~d~G~Y~C~~~n~~~----------~~~~~~~~~~l~V~~~~~-~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~- 426 (978)
+.+|+|.|.|.+.+..+ ..........|.|...+. .+.+. +.. ........|+.++|.|.+.|.
T Consensus 88 ~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~-~~~---~~~~~~~~~~~v~L~C~~~g~~ 163 (512)
T 1zvo_C 88 SAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVF-PII---SGCRHPKDNSPVVLACLITGYH 163 (512)
T ss_pred CHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEE-ecc---CCcccccCCCeEEEEEEEEeee
Confidence 99999999999987642 011112235777764321 11111 000 000102357899999999986
Q ss_pred CCC-eeEEEEcCccCCC--Cceee------ecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEE-----------EEEEE
Q psy12060 427 PVP-SYNWTRRGSPLPR--NAYFE------NFNRILTIPNVKVEDQGEYICRASNDRSALESSV-----------TISIQ 486 (978)
Q Consensus 427 p~~-~v~W~~~~~~l~~--~~~~~------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~-----------~l~V~ 486 (978)
|.| +|+|++++..... ..... .....|.|.....+ .|.|+|.|.|..+.....+ .+.|.
T Consensus 164 P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~ 242 (512)
T 1zvo_C 164 PTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPT 242 (512)
T ss_pred cCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEe
Confidence 765 8999997654210 01011 11235888887777 9999999999987755443 23333
Q ss_pred ee----------------------------------------------------ceeec-cCCcccccCCCceeEEEEee
Q psy12060 487 AE----------------------------------------------------PNFTI-PLTDKHMDNQADLTWTCEAF 513 (978)
Q Consensus 487 ~~----------------------------------------------------p~~~~-~~~~~~~~~g~~~~l~C~~~ 513 (978)
.+ |.+.+ ++....+.+|+.++|.|.+.
T Consensus 243 ~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~ 322 (512)
T 1zvo_C 243 AQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVV 322 (512)
T ss_pred CCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEe
Confidence 22 33322 33334567899999999999
Q ss_pred cC-C-CCeeEEeECCEECCCCCC---CCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEE-E---
Q psy12060 514 GV-P-DVTYSWFRNGELLNSETL---PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL-T--- 584 (978)
Q Consensus 514 ~~-p-~~~i~W~~~g~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~-~--- 584 (978)
|+ | ...|+|+|+|..+..... .....+........|.|..... +|.|.|+|.|.|..+... ...+... .
T Consensus 323 g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~-~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~~ 400 (512)
T 1zvo_C 323 GSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLW-NAGTSVTCTLNHPSLPPQ-RLMALREPAAQA 400 (512)
T ss_pred ceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHh-cCCCeEEEEEEeCCCCCC-ceeEEeecCCCC
Confidence 86 3 359999999998652110 0111122222335688887775 899999999999877543 3333221 1
Q ss_pred -cCCccccCCCCcceeecCCCeEE-EEEeeccCCCC--eeEEeeCCEEecCCCcE----EEeecC-------cEEEcccc
Q psy12060 585 -LKPSFKKRPLESETYAGEGGNVT-IFCNPEAAPKP--KFVWKKDGNIIGSGGRR----KIFENG-------NLLISPVS 649 (978)
Q Consensus 585 -~~p~~~~~~~~~~~~~~~g~~~~-l~C~~~~~p~~--~i~W~~~g~~~~~~~~~----~~~~~~-------~l~i~~~~ 649 (978)
.+|.+...+... .|+.+. |.|.+.|.+++ .|.|+|+|..+..+... ....++ .|.|....
T Consensus 401 ~~~p~v~~~~~~~-----~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~ 475 (512)
T 1zvo_C 401 PVKLSLNLLASSD-----PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPP 475 (512)
T ss_pred CCCCEEEEEccCc-----CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchh
Confidence 234443332111 689999 99999986443 78999999988654211 122333 26666677
Q ss_pred CCCCEEEEEEEEeCCceee
Q psy12060 650 RDDSGIYSCTATNVHGMDE 668 (978)
Q Consensus 650 ~~d~G~Y~C~a~n~~g~~~ 668 (978)
.+|.|.|+|.|.|......
T Consensus 476 ~~~~g~YtC~v~h~~l~~~ 494 (512)
T 1zvo_C 476 SPQPATYTCVVSHEDSRTL 494 (512)
T ss_pred cCCCCeEEEEEEecCCCCc
Confidence 7779999999999865543
No 83
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.96 E-value=1.8e-26 Score=262.33 Aligned_cols=346 Identities=14% Similarity=0.221 Sum_probs=215.9
Q ss_pred CCCCCCCcEEEEEEEeecCC----CeeEEEEcC--ccCC----------------CCceee------ecccEEEeCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYPV----PSYNWTRRG--SPLP----------------RNAYFE------NFNRILTIPNVKV 460 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~----~~v~W~~~~--~~l~----------------~~~~~~------~~~~~L~i~~~~~ 460 (978)
..+.+|++++|.|.+.+.+. ..+.|||+. ..+. ...++. ....+|.|.+++.
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 89 (512)
T 1zvo_C 10 GLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSA 89 (512)
T ss_pred EEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCCH
Confidence 35679999999999987543 679999862 2210 011221 1135899999999
Q ss_pred CCCeEEEEEEEeCCC----------c---eEEEEEEEEEe----eceeec-cCCcccccCCCceeEEEEeecC-CCC-ee
Q psy12060 461 EDQGEYICRASNDRS----------A---LESSVTISIQA----EPNFTI-PLTDKHMDNQADLTWTCEAFGV-PDV-TY 520 (978)
Q Consensus 461 ~d~G~Y~C~a~n~~g----------~---~~~~~~l~V~~----~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~-~i 520 (978)
+|+|.|.|.+.+..+ . ....+.|.|.. +|.+.. .+.......|+.++|.|.+.+. |.+ .|
T Consensus 90 ~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p~~v 169 (512)
T 1zvo_C 90 ADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTV 169 (512)
T ss_pred HHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCceEE
Confidence 999999999998642 1 12345677763 455442 2211112346899999999987 654 89
Q ss_pred EEeECCEECCCCCC--CCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEE-----------EEEEEEcCC
Q psy12060 521 SWFRNGELLNSETL--PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA-----------QLRVLTLKP 587 (978)
Q Consensus 521 ~W~~~g~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~-----------~l~v~~~~p 587 (978)
+|++++........ .....+.+. ....|.|..... + .|.|+|.|.|..+...... .+.+. .+|
T Consensus 170 ~W~~~~~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~-~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~-~pp 245 (512)
T 1zvo_C 170 TWYMGTQSQPQRTFPEIQRRDSYYM-TSSQLSTPLQQW-R-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPT-AQP 245 (512)
T ss_pred EEEcCcccCceEecCceecCCCCEE-EEEEEEEcHHHc-C-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEe-CCC
Confidence 99997543210000 000112222 234688877664 5 8999999999887655443 12222 122
Q ss_pred ----------------------------------------------------ccccCCCCcceeecCCCeEEEEEeeccC
Q psy12060 588 ----------------------------------------------------SFKKRPLESETYAGEGGNVTIFCNPEAA 615 (978)
Q Consensus 588 ----------------------------------------------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 615 (978)
.+.+.+. ....+..|+.++|.|.+.|.
T Consensus 246 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p-~~~~~~~g~~~~L~C~v~g~ 324 (512)
T 1zvo_C 246 QAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTP-AVQDLWLRDKATFTCFVVGS 324 (512)
T ss_pred chhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECC-ChHHhccCCceEEEEEEece
Confidence 1111111 11124579999999999986
Q ss_pred CC--CeeEEeeCCEEecCCC---cEEEeecC------cEEEccccCCCCEEEEEEEEeCCceeeeeEEEEE------EeC
Q psy12060 616 PK--PKFVWKKDGNIIGSGG---RRKIFENG------NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV------LHG 678 (978)
Q Consensus 616 p~--~~i~W~~~g~~~~~~~---~~~~~~~~------~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v------~~~ 678 (978)
++ ..|+|+++|..+.... ......++ .|.|.....+|.|.|+|.|.|..+... ...+.. ..+
T Consensus 325 ~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~~~~~ 403 (512)
T 1zvo_C 325 DLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQAPVK 403 (512)
T ss_pred ECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCCCCCC
Confidence 44 3999999998765221 11111233 489999999999999999999887654 333322 123
Q ss_pred CceeeeCCCceEEEccccEE-EEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCC------ceEEEeccCCCC
Q psy12060 679 PSYYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG------GLLEITNASFAD 751 (978)
Q Consensus 679 p~~~~~~~~~~~~~~g~~~~-l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~------~~l~i~~~~~~d 751 (978)
|.+....+.. .|+.+. |.|.+.+.+++.+.+.|+|+|..+...... ........++ ..|.|.....+|
T Consensus 404 p~v~~~~~~~----~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~-~~~~~~~~dg~~~~~~s~L~v~~~~~~~ 478 (512)
T 1zvo_C 404 LSLNLLASSD----PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFA-PARPPPQPGSTTFWAWSVLRVPAPPSPQ 478 (512)
T ss_pred CEEEEEccCc----CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCcccc-ccceeECCCCCEEEEEEEEEECchhcCC
Confidence 4433322222 688899 999999988788889999999988653210 0001111222 245566666667
Q ss_pred CEEEEEEEEcCCCc
Q psy12060 752 AGEYECVVKSTVGK 765 (978)
Q Consensus 752 ~g~Y~c~a~n~~G~ 765 (978)
.|.|+|.|.|....
T Consensus 479 ~g~YtC~v~h~~l~ 492 (512)
T 1zvo_C 479 PATYTCVVSHEDSR 492 (512)
T ss_pred CCeEEEEEEecCCC
Confidence 99999999998664
No 84
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.95 E-value=6.6e-29 Score=268.58 Aligned_cols=258 Identities=20% Similarity=0.337 Sum_probs=202.3
Q ss_pred CCCCCCCcEEEEEEEe-------ecCCCeeEEEEcCccC--CCC--ceeeecccEEEeCCCCCCCCeEEEEEEEeCCCce
Q psy12060 409 EAPKAGDKVRLECVAF-------GYPVPSYNWTRRGSPL--PRN--AYFENFNRILTIPNVKVEDQGEYICRASNDRSAL 477 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~-------g~p~~~v~W~~~~~~l--~~~--~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 477 (978)
..+.+|++++|.|.+. +.|.+.|+|+|++..+ ... .++...++.|.|.+++.+|+|.|+|.+.|..|..
T Consensus 28 ~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~ 107 (339)
T 3o4o_C 28 EFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCD 107 (339)
T ss_dssp EEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEECCEEETTEEE
T ss_pred EEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEEEEECCcceE
Confidence 4567999999999998 8899999999999884 332 2344556789999999999999999999999988
Q ss_pred EEEEEEEEEeeceee--ccCCcccccCCCceeEEEE-----eecCCCCeeEEeECCEECCCCCCCCCCCCcEEEec--CE
Q psy12060 478 ESSVTISIQAEPNFT--IPLTDKHMDNQADLTWTCE-----AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--NV 548 (978)
Q Consensus 478 ~~~~~l~V~~~p~~~--~~~~~~~~~~g~~~~l~C~-----~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~--~~ 548 (978)
...+.|.|..+|... .......+.+|+.++|.|. +.+.|.+.+.|+|+|..+.. ...++.... +.
T Consensus 108 ~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~------~~~~~~~~~~~~~ 181 (339)
T 3o4o_C 108 KMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDK------DNEKFLSVRGTTH 181 (339)
T ss_dssp EEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCT------TCSSEEECTTSSE
T ss_pred EEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCC------CCceeEEcCCcce
Confidence 889999998876532 2223346789999999999 77889999999999988863 223444433 47
Q ss_pred EEEEeCCCCCCCeEEEEEEEcCCCc----eeeEEEEEEEEc----CCccccCCCCcceeecCCCeEEEEEee---ccCC-
Q psy12060 549 LTIRYLNPERDPAMYQCRAKNQLKT----RYSSAQLRVLTL----KPSFKKRPLESETYAGEGGNVTIFCNP---EAAP- 616 (978)
Q Consensus 549 l~i~~~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~v~~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~---~~~p- 616 (978)
|.|.++.. +|+|.|+|.|.|..|. ......|.|... +|.+... .....+..|+.+.|.|.+ .|.|
T Consensus 182 L~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~--~~~~~v~~G~~v~L~C~~~~~~g~P~ 258 (339)
T 3o4o_C 182 LLVHDVAL-EDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISP--LKTISASLGSRLTIPCKVFLGTGTPL 258 (339)
T ss_dssp EEESSCCG-GGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCC--SCCCCCCCCSCCCCCCCEEESSSCCS
T ss_pred EEEcccCH-hhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecC--CceeEeccCCCEEEEEEEECCCCCCC
Confidence 99999986 9999999999998874 445566777642 2333333 344457899999999999 8999
Q ss_pred CCeeEEeeCCEEecC---------CCcEEEeecC------cEEEccccCCCC-EEEEEEEEeCCceeeeeEEEEE
Q psy12060 617 KPKFVWKKDGNIIGS---------GGRRKIFENG------NLLISPVSRDDS-GIYSCTATNVHGMDESKGRLIV 675 (978)
Q Consensus 617 ~~~i~W~~~g~~~~~---------~~~~~~~~~~------~l~i~~~~~~d~-G~Y~C~a~n~~g~~~~~~~l~v 675 (978)
.+.+.|+++|..+.. +.+..+..++ .|.|.++..+|+ |.|+|.|.|..|.....+.+.+
T Consensus 259 ~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 259 TTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp SCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred CceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 789999999977542 2333334445 699999999997 9999999999999988776654
No 85
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=6.3e-28 Score=257.60 Aligned_cols=272 Identities=15% Similarity=0.165 Sum_probs=177.9
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
.+|.|...|... + .+|++++|+|.+.|. .+.+.|+|+|..+... ......++.|.|.++ +.+
T Consensus 23 ~~P~i~~~p~~~-v-----~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~----------~~~~~~~~~L~I~~v-~~~ 84 (316)
T 3vh8_G 23 DKPFLSAWPSAV-V-----PRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI----------FHGRIFQESFNMSPV-TTA 84 (316)
T ss_dssp -CCEEEEESCSE-E-----ETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH----------HHHCCBSSCEEECSC-CGG
T ss_pred CCCEeeccCCCc-c-----CCCCCEEEEEEccCC-CceEEEEeCCCcccee----------ecCCcceEEEEECCC-Ccc
Confidence 468999998844 3 346779999999988 6899999999653210 111224678999997 899
Q ss_pred CCeEEEEEEEeCc----eeEEeEEEEEEEeeec---ccccCCCCeeeecccCeEEEeCCCCCCCCceEEEeccccccccc
Q psy12060 268 DRGSYHCKASNKF----GSIISESVQLAFGFIG---EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE 340 (978)
Q Consensus 268 d~G~Y~C~a~n~~----g~~~s~~~~l~v~~~~---~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~ 340 (978)
|+|.|+|.|.|.. ....+..+.|.|.... .+...+ ...+.+|+.++|.|.+. .+++.+.|+|++..+...
T Consensus 85 D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~-~~~v~~G~~v~L~C~~~--~~~~~~~w~k~g~~~~~~ 161 (316)
T 3vh8_G 85 HAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHP-GPLVKSGERVILQCWSD--IMFEHFFLHKEGISKDPS 161 (316)
T ss_dssp GCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEEES--SCCSEEEEEETTCCSCCE
T ss_pred cCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecC-CCccCCCCeEEEEEcCC--CCCcEEEEEECCCccccc
Confidence 9999999998643 2234556777775432 222222 23477899999999983 356689999998775322
Q ss_pred ccceEEE--eeCCcEEEeeeeeecceeeEEEEEeeccccc--ccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCc
Q psy12060 341 EDKRVFV--SYDGALYFSALEQIDAGNYSCNVQSKVSDTG--RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK 416 (978)
Q Consensus 341 ~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~ 416 (978)
....... ...+.|.|.+++.+|+|.|+|.|.|..+... ..+..+.|.|...+..+.+...+. ..+.+|++
T Consensus 162 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~------~~v~~G~~ 235 (316)
T 3vh8_G 162 RLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG------PKVQAGES 235 (316)
T ss_dssp EEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC------SCCCTTSC
T ss_pred eeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC------CeecCCCc
Confidence 1111111 1345799999999999999999999876421 224457777765433222222211 25679999
Q ss_pred EEEEEEEeecCCCeeEEEEcCccCCCCcee-----eecccEEEeCCCCCCCCeEEEEEEEeCCCc-----eEEEEEEEEE
Q psy12060 417 VRLECVAFGYPVPSYNWTRRGSPLPRNAYF-----ENFNRILTIPNVKVEDQGEYICRASNDRSA-----LESSVTISIQ 486 (978)
Q Consensus 417 ~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~ 486 (978)
++|.|.+. .|.+.+.|+|+|..+...... ......|.|.+++ |+|.|+|.|.|..+. .+..+.|.|.
T Consensus 236 v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 312 (316)
T 3vh8_G 236 VTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVT 312 (316)
T ss_dssp CEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC---
T ss_pred EEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEe
Confidence 99999987 477899999999887642211 1123689999999 999999999997653 3556777777
Q ss_pred eec
Q psy12060 487 AEP 489 (978)
Q Consensus 487 ~~p 489 (978)
.+|
T Consensus 313 g~p 315 (316)
T 3vh8_G 313 GNP 315 (316)
T ss_dssp ---
T ss_pred CCC
Confidence 665
No 86
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.95 E-value=1.8e-27 Score=250.94 Aligned_cols=273 Identities=17% Similarity=0.166 Sum_probs=200.7
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 567 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a 567 (978)
+|.+...+....+.+|++++|.|.+.+ .+.|++++...... ........|.|.++.. +|+|.|+|.+
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~--------~~~~~~~~L~i~~~~~-~d~G~Y~C~~ 70 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWTL--------DPESPGSTLTTRNATF-KNTGTYRCTE 70 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSEE--------CCCSSCCEEEESSCCG-GGCEEEEEEC
T ss_pred CcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEEE--------eccCCccEEEEeeecc-ccCEEEEEEE
Confidence 556666667778999999999999876 49999876432100 0111335899999996 9999999999
Q ss_pred EcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCe-eEEee-CCEEecCCCcEEEeecCcEEE
Q psy12060 568 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK-FVWKK-DGNIIGSGGRRKIFENGNLLI 645 (978)
Q Consensus 568 ~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~-~g~~~~~~~~~~~~~~~~l~i 645 (978)
.|..+.......|.|...+..+...+ ....+.+|+++.|.|.+.+.+.+. +.|++ ++..+....++.+..++.|.|
T Consensus 71 ~~~~~~~~~~~~l~V~~~~~~~~~~~--~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i 148 (289)
T 3ejj_X 71 LEDPMAGSTTIHLYVKDPAHSWNLLA--QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFII 148 (289)
T ss_dssp CC-----CEEEEEEECCSSCSEEESC--SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEE
T ss_pred eccCCcceeEEEEEEeCCCcceeccc--ceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEE
Confidence 99888877777888775333333333 556688999999999999877664 99985 777777777887877889999
Q ss_pred ccccCCCCEEEEEEEE-eCCceeeeeEEEEEEe----CCceeeeCCCceEEEccccEEEEEEeee-cCCcCeEEEEeeCC
Q psy12060 646 SPVSRDDSGIYSCTAT-NVHGMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNG 719 (978)
Q Consensus 646 ~~~~~~d~G~Y~C~a~-n~~g~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~~W~~~g 719 (978)
.++..+|+|.|+|.|. +..+.....+.|.|.. +|.+. ..+....+..|+.+.|.|.+.+ .|. ..+.|++++
T Consensus 149 ~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~-~~~~~~~~~~g~~~~l~C~~~~~~p~--~~i~W~~~~ 225 (289)
T 3ejj_X 149 RKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIK-LEPSKLVRIRGEAAQIVCSATNAEVG--FNVILKRGD 225 (289)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEE-EESSSEECCSSSCEEEEEEEEESSSC--CEEEEEETT
T ss_pred eecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEE-ecCCceEEEeCCcEEEEEEeCCCCCc--eEEEEEECC
Confidence 9999999999999999 5556666778888873 44433 3345556678999999999998 454 466999999
Q ss_pred EEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCC
Q psy12060 720 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779 (978)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~ 779 (978)
..+........ ........+.|.|.++..+|+|.|+|.|.|..|..++++.|.+..++.
T Consensus 226 ~~~~~~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 226 TKLEIPLNSDF-QDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp EECCCCEEEEE-CSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC----
T ss_pred EEeeccCCccc-ccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEeccc
Confidence 98754221100 011112246899999999999999999999999999999999876553
No 87
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.95 E-value=9.8e-27 Score=241.39 Aligned_cols=251 Identities=16% Similarity=0.220 Sum_probs=195.0
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCC-eeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDV-TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 566 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~ 566 (978)
+|.+...+....+.+|+.++|.|.+.+.|.+ .++|+|+|..+... ...|.|.++.. +|+|.|+|.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~-------------~~~l~i~~~~~-~d~G~Y~C~ 66 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS-------------TPSYRITSASV-NDSGEYRCQ 66 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC-------------SSEEEESSCCG-GGCEEEEEE
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc-------------CCeEEEecCCc-ccCeEEEEE
Confidence 4677777888889999999999999988877 99999999988631 45788999986 999999999
Q ss_pred EEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEee-ccCCCCeeEEeeCCEEecCCCcEEEeecCcEEE
Q psy12060 567 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 645 (978)
Q Consensus 567 a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i 645 (978)
+.|..+.. ...+.|.. +.+...+ ....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... ...+.|.|
T Consensus 67 ~~~~~~s~--~~~l~v~~--~~~~~~~--~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----~~~~~l~i 135 (262)
T 3rjd_A 67 RGLSGRSD--PIQLEIHR--GWLLLQV--SSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----HWNSNLTI 135 (262)
T ss_dssp ESSSCCCC--CEEEEEEC--SSEEEEE--SCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----EECCCEEE
T ss_pred EecCCccc--cEEEEEec--cceEecC--CCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-----CCCCeEEE
Confidence 99866543 45555553 2232222 23347799999999999 67788899999999887432 23567999
Q ss_pred ccccCCCCEEEEEEEEeCCceeeeeEEEEEEeC--CceeeeCCCceEEEccccEEEEEEeeecCC-cC--eEEEEeeCCE
Q psy12060 646 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LD--VAYIWTHNGV 720 (978)
Q Consensus 646 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~--~~~~W~~~g~ 720 (978)
.++..+|+|.|+|.|.|..+.....+.|.|... ++.+.. .+...+..|+.+.|.|.+.+.|. +. ..+.|++++.
T Consensus 136 ~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~-~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~ 214 (262)
T 3rjd_A 136 LKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNA-SVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSK 214 (262)
T ss_dssp SSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEE-SSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTE
T ss_pred EECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEee-cCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCc
Confidence 999999999999999999988888888888863 333333 33566889999999999999875 43 4578999998
Q ss_pred EccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCce---eeeEEEEEc
Q psy12060 721 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI---STKTTVIVE 775 (978)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~---s~~~~l~v~ 775 (978)
.+... .....|.|.++..+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 215 ~~~~~-----------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~V~ 261 (262)
T 3rjd_A 215 TLRGR-----------NTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVL 261 (262)
T ss_dssp EEEEE-----------ESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEECEE
T ss_pred Eeccc-----------CCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEEEe
Confidence 77531 235689999999999999999999999964 334555543
No 88
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=2.3e-27 Score=246.07 Aligned_cols=241 Identities=15% Similarity=0.197 Sum_probs=174.8
Q ss_pred cccCcEEEEEEeec-CCCC--eEEEEEcccccccccccccCCCCCCceEeecceEEEeCC--CCCCCCeE--EEEEEEeC
Q psy12060 207 SILNDITLSCYAGG-YPNP--SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP--RQVEDRGS--YHCKASNK 279 (978)
Q Consensus 207 ~~g~~~~l~C~~~g-~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~--~~~~d~G~--Y~C~a~n~ 279 (978)
.+|+.++|+|.+.| .|.+ +|.|+|+|.++.. +....++.|.+... ++.+|+|. |+|.|.|.
T Consensus 16 ~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~------------~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~ 83 (265)
T 2oz4_A 16 EVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP------------TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILG 83 (265)
T ss_dssp ETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC------------EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEET
T ss_pred ecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc------------eEeeCCCeEEEEeecccccccCCcceEEEEEecC
Confidence 35778999999998 8877 9999999976431 22233444554432 15678774 99999999
Q ss_pred ceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeee
Q psy12060 280 FGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALE 359 (978)
Q Consensus 280 ~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 359 (978)
.|.. +..+.|.|...+..........+.+|+.++|.|.+. |.+.|+| +|.++.... ..+.|.|..+.
T Consensus 84 ~~~~-~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~---p~~~i~W--~g~~~~~~~-------~~~~l~i~~~~ 150 (265)
T 2oz4_A 84 NQSQ-ETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH---PRAKVTL--NGVPAQPLG-------PRAQLLLKATP 150 (265)
T ss_dssp TEEE-EEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC---TTSEEEE--SSCSSSCCS-------SEECCEEECCG
T ss_pred CCCc-EEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc---CCCEEEE--CCEEccCCC-------CcEEEEEcccc
Confidence 8874 467788876544333334455677899999999985 8899999 776642111 12468899999
Q ss_pred eecceeeEEEEEeec-ccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCc
Q psy12060 360 QIDAGNYSCNVQSKV-SDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGS 438 (978)
Q Consensus 360 ~~d~G~Y~C~~~n~~-~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~ 438 (978)
.+|+|.|+|.|.|.. |.....+..+.|.|..+|.......|. ...+.+|+.++|.|.+.|+|.|.|+|+|++.
T Consensus 151 ~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~------~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 151 EDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPG------NWTWPENSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp GGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCS------EEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred ccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCC------ccEEcCCCeEEEEeECccCCCCeEEEEECCc
Confidence 999999999998755 443333345778887766543222111 2356789999999999999999999999998
Q ss_pred cCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEe
Q psy12060 439 PLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487 (978)
Q Consensus 439 ~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 487 (978)
.+... +.|. .++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 225 ~~~~~-------g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 225 FPLPI-------GESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp EECCT-------TSCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ccCCC-------CcEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 32211 1222 3778999999999999999999999999875
No 89
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.95 E-value=8.2e-27 Score=248.72 Aligned_cols=264 Identities=15% Similarity=0.201 Sum_probs=195.8
Q ss_pred ceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCcee
Q psy12060 688 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 767 (978)
Q Consensus 688 ~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s 767 (978)
.+.+..|+.++|.|.+.+.+ +...+.|++++..+.. . ..+....++.|.|.++...|+|.|+|. ..|...
T Consensus 15 ~v~~~~G~~v~l~C~~~~~~-~~~~i~W~~~~~~~~~-~-----~~~~~~~~~~L~i~~v~~~d~G~Y~C~---~~g~~~ 84 (325)
T 1n26_A 15 VLTSLPGDSVTLTCPGVEPE-DNATVHWVLRKPAAGS-H-----PSRWAGMGRRLLLRSVQLHDSGNYSCY---RAGRPA 84 (325)
T ss_dssp EEEECTTCCEEEECTTSCTT-CCSEEEEEEECSSSSC-C-----CEEEEEESSEEEECSCCGGGCEEEEEE---SSSSCS
T ss_pred cEECCCCCcEEEEeCCCCCC-CCceEEEEECCccCCc-c-----ccccccccceEEecccchhhCeEeEEE---eCCEEe
Confidence 33447999999999988765 2346799998865521 1 122334467999999999999999999 378888
Q ss_pred eeEEEEEcCCCCCCCceEEEE-eeCCeeEEEeecCCCCCCCceeEEEEEeecc-c--cCc-eEecccccceeeeecCCce
Q psy12060 768 TKTTVIVEGPPGLPGGVQVVE-VHKTSATIQWTDGATNGRPITHYKIIARTNW-N--STW-FNVSEHVIGKEVDRYTGRK 842 (978)
Q Consensus 768 ~~~~l~v~~~P~~P~~~~~~~-~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~-~--~~w-~~~~~~~~~~~~~~~~~~~ 842 (978)
+.+.|.|..||++|. +.... ....++.++|.++.+.+ ....|.|+|+... . ..| ..+... ......
T Consensus 85 ~~~~L~V~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~~~-~~~~y~l~~~~~~~~~~~~~~~~c~~~-------~~~~~~ 155 (325)
T 1n26_A 85 GTVHLLVDVPPEEPQ-LSCFRKSPLSNVVCEWGPRSTPS-LTTKAVLLVRKFQNSPAEDFQEPCQYS-------QESQKF 155 (325)
T ss_dssp CEEEEEECCCCCCCC-CEEEBSSTTSCEEEEECCSSCCC-TTCEEEEEEEEESSSSCEEEEEEEEEE-------TTTTEE
T ss_pred eeEEEEeccCCCCCc-eeEEeecCCCcEEEEECCCCCCC-CCceEEEEEEEccCCCCCcccccCCCC-------CCCCCE
Confidence 899999999999997 76642 34679999999987766 4588999987642 1 122 222110 012345
Q ss_pred eeEEeeccC-CCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccc--cCcEEEEEEeCCCCCCCCCcc
Q psy12060 843 EASIENVLV-PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK--IGDLSISWEPLPREKQNAPNI 919 (978)
Q Consensus 843 ~~~~~~~L~-p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~--~~si~v~W~~p~~~~~~g~i~ 919 (978)
..++.. |. +++.|.|+|.|.|..|.+.. ... .+.+...+++.+|.++.+...+ ++++.|+|++|...+.++.++
T Consensus 156 ~c~i~~-~~~~~~~Y~f~v~A~N~~G~~~s-~~~-~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~ 232 (325)
T 1n26_A 156 SCQLAV-PEGDSSFYIVSMCVASSVGSKFS-KTQ-TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRL 232 (325)
T ss_dssp EEEECC-CTTCCCEEEEEEEEEETTEEEEC-CCE-EEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCE
T ss_pred EEEECC-CcccCcEEEEEEEEEcCCCCccc-CcE-EEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeE
Confidence 566776 65 78999999999999998752 222 3444455566899999988765 368999999966555678899
Q ss_pred eEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 920 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 920 ~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
+|+|+|+..+...|....+.. .. ..+.|.+|.|++.|.|+|+|.|.+|.|++|+
T Consensus 233 ~Y~V~yr~~~~~~W~~~~~~~--~~--~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~ 286 (325)
T 1n26_A 233 RFELRYRAERSKTFTTWMVKD--LQ--HHCVIHDAWSGLRHVVQLRAQEEFGQGEWSE 286 (325)
T ss_dssp EEEEEEEETTCSCCEEEECGG--GC--SEEEESSCCTTCCEEEEEEEEETTTBSCCCC
T ss_pred EEEEEEEeCCCCCCEEEcccC--Cc--eEEEEeCCCCCCeEEEEEEEecCCCCCCCcC
Confidence 999999998888887654321 22 3467899999999999999999999999986
No 90
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.95 E-value=4e-27 Score=253.73 Aligned_cols=265 Identities=20% Similarity=0.249 Sum_probs=195.5
Q ss_pred CCCeeeecccCeEEEeCCCCCC---CCceEEEeccccc---------------ccccccceEEEe----eCCcEEEeeee
Q psy12060 302 RAPEIGNQNWGKAMFCDPPTNY---PGVNYYWARDYFP---------------NFVEEDKRVFVS----YDGALYFSALE 359 (978)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~---p~~~i~W~~~~~~---------------~~~~~~~~~~~~----~~~~L~i~~~~ 359 (978)
+....+.+|+.++|.|.+.... +.+.|.|+|++.. +......++.+. .+++|.|.+++
T Consensus 21 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 100 (331)
T 3u83_A 21 NDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLE 100 (331)
T ss_dssp CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCC
T ss_pred CCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccC
Confidence 3345678899999999985432 4468999996521 111223455443 34679999999
Q ss_pred eecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCC---CcEEEEEE-EeecCCCeeEEEE
Q psy12060 360 QIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAG---DKVRLECV-AFGYPVPSYNWTR 435 (978)
Q Consensus 360 ~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G---~~~~l~C~-~~g~p~~~v~W~~ 435 (978)
.+|+|.|+|.+.+... +.....+.|.|..+|.......+. ...+.+| +.++|.|. +.+.|.+.|+|++
T Consensus 101 ~~D~G~Y~C~~~~~~~--~~~~~~~~l~V~~~p~~~~~~~~~------~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~ 172 (331)
T 3u83_A 101 LEDEGVYICEFATFPT--GNRESQLNLTVMAKPTNWIEGTQA------VLRAKKGQDDKVLVATCTSANGKPPSVVSWET 172 (331)
T ss_dssp GGGCEEEEEEEEEETT--EEEEEEEEEEEEBCCEEEEEECSS------CEEECTTCCCCEEEEEEEEEEEBSCCEEEEEE
T ss_pred cccCcEEEEEEEecCC--CccEEEEEEEEecCCcceeecCCC------ceeecCCCccceEEEEEEecCCcCCceEEEEc
Confidence 9999999999654432 223344788888766542221111 1345677 88999998 7799999999999
Q ss_pred cCccCCCCce------eeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeec-cCCcccccCCCceeE
Q psy12060 436 RGSPLPRNAY------FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI-PLTDKHMDNQADLTW 508 (978)
Q Consensus 436 ~~~~l~~~~~------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~~~l 508 (978)
++........ .......|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.+.. .+....+.+|++++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l 252 (331)
T 3u83_A 173 RLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKL 252 (331)
T ss_dssp SSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEE
T ss_pred CCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEE
Confidence 6332211111 111235699999999999999999999999989999999999998775 444556889999999
Q ss_pred EEEeecCCCCe-eEEeECCEECCCCCCCCCCCCcEEEecCEEEEE-eCCCCCCCeEEEEEEEcCCCceeeEEEEEEEE
Q psy12060 509 TCEAFGVPDVT-YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR-YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584 (978)
Q Consensus 509 ~C~~~~~p~~~-i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 584 (978)
.|.+.+.|.+. +.|++++..+.. ......+.|.|. ++.. +|+|.|+|.|.|..|.....+.|.|..
T Consensus 253 ~C~~~g~p~p~~i~W~~~~~~~~~---------~~~~~~~~L~i~~~v~~-~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 320 (331)
T 3u83_A 253 TCKADANPPATEYHWTTLNGSLPK---------GVEAQNRTLFFKGPINY-SLAGTYICEATNPIGTRSGQVEVNITE 320 (331)
T ss_dssp EEEEEEESCCCEEEEEETTBSCCT---------TEEEETTEEEECSCCCG-GGCEEEEEEEEETTEEEEEEEEECCBC
T ss_pred EEeCcCCCCCCEEEEEECCCcccc---------cceecCcEEEEeCCCcc-ccCeEEEEEEEeccccceEEEEEEEec
Confidence 99999999998 999999987752 234567799999 8886 999999999999999988877777764
No 91
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.95 E-value=4.7e-27 Score=252.33 Aligned_cols=266 Identities=17% Similarity=0.274 Sum_probs=179.5
Q ss_pred CCCeeeecccCeEEEeCCCCCCCCceEEEecccccccc---c----ccceEEE--------eeCCcEEEeeeeeecceee
Q psy12060 302 RAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV---E----EDKRVFV--------SYDGALYFSALEQIDAGNY 366 (978)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~---~----~~~~~~~--------~~~~~L~i~~~~~~d~G~Y 366 (978)
+....+.+|+.++|.|.+....|.+.|+|+|++.+... . ...++.. ..+++|.|.+++.+|+|.|
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (327)
T 2wng_A 10 DKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTY 89 (327)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEE
T ss_pred CCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEE
Confidence 44567889999999999855448889999999865211 0 1123333 2345799999999999999
Q ss_pred EEEEEeeccccc--ccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCC--eeEEEEcCccCCC
Q psy12060 367 SCNVQSKVSDTG--RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVP--SYNWTRRGSPLPR 442 (978)
Q Consensus 367 ~C~~~n~~~~~~--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~--~v~W~~~~~~l~~ 442 (978)
+|.|.|..+... ..+..+.|.|...+..+.+..+ ...+.+|+.++|.|.+.|.|++ .|+|+|+|..+..
T Consensus 90 ~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~-------~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~ 162 (327)
T 2wng_A 90 YCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGP-------AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSD 162 (327)
T ss_dssp EEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECC-------SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred EEEeecCCCcceeEeecCcEEEEEEecCCCceeecc-------ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccc
Confidence 999999754311 1223467888776654443322 1356799999999999998776 8999999999875
Q ss_pred Cceee---------ecccEEEeCCCCCCCCeEEEEEEEeCCCc---eEEEEEE--EEEeeceeeccCCcccccCCCceeE
Q psy12060 443 NAYFE---------NFNRILTIPNVKVEDQGEYICRASNDRSA---LESSVTI--SIQAEPNFTIPLTDKHMDNQADLTW 508 (978)
Q Consensus 443 ~~~~~---------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~---~~~~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l 508 (978)
..... .....|.|.....+|+|.|+|.|.|..+. ...++.+ .+..+|.+...+.. +.+|+.++|
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l 240 (327)
T 2wng_A 163 FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNV 240 (327)
T ss_dssp EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEE
T ss_pred cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEE
Confidence 43211 11235778877777889999999998765 2344444 45677877665443 789999999
Q ss_pred EEEeecC-CCC-eeEEeECCEECCCCCC--CCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeE
Q psy12060 509 TCEAFGV-PDV-TYSWFRNGELLNSETL--PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577 (978)
Q Consensus 509 ~C~~~~~-p~~-~i~W~~~g~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~ 577 (978)
.|.+.|. |.+ .|.|+|||..+..... .....+........|.|..+.. +|+|.|+|.|.|..+.....
T Consensus 241 ~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~~~~~s~ 312 (327)
T 2wng_A 241 TCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAH-RDDVKLTCQVEHDGQPAVSK 312 (327)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC--------CCEEEEEEEETTCCCEEE
T ss_pred EEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccc-cCCCEEEEEEEeCCCCCchh
Confidence 9999985 443 8999999998753210 0001111111223578888875 89999999999998865443
No 92
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.95 E-value=3e-27 Score=254.71 Aligned_cols=263 Identities=19% Similarity=0.293 Sum_probs=196.3
Q ss_pred CCCCCCCcEEEEEEEeec----CCCeeEEEEcCcc---------------C--CCCcee-----eecccEEEeCCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGY----PVPSYNWTRRGSP---------------L--PRNAYF-----ENFNRILTIPNVKVED 462 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~----p~~~v~W~~~~~~---------------l--~~~~~~-----~~~~~~L~i~~~~~~d 462 (978)
..+.+|++++|.|.+.+. +.+.|.|+|++.. + ....++ ...+.+|.|.+++.+|
T Consensus 24 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 103 (331)
T 3u83_A 24 MYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELED 103 (331)
T ss_dssp EEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGGG
T ss_pred EEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCccc
Confidence 356799999999999876 4557999996521 1 111111 1235679999999999
Q ss_pred CeEEEEE-EEeCCCceEEEEEEEEEeeceeec--cCCcccccCC---CceeEEEE-eecCCCCeeEEeEC--CEECCCCC
Q psy12060 463 QGEYICR-ASNDRSALESSVTISIQAEPNFTI--PLTDKHMDNQ---ADLTWTCE-AFGVPDVTYSWFRN--GELLNSET 533 (978)
Q Consensus 463 ~G~Y~C~-a~n~~g~~~~~~~l~V~~~p~~~~--~~~~~~~~~g---~~~~l~C~-~~~~p~~~i~W~~~--g~~~~~~~ 533 (978)
+|.|+|. +.+..|.....+.|.|..+|.+.. .+....+.+| +.++|.|. +.+.|.+.+.|+++ +.......
T Consensus 104 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 183 (331)
T 3u83_A 104 EGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEI 183 (331)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEE
T ss_pred CcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCcccccee
Confidence 9999998 556677788889999999887643 4455667788 78999998 77889999999995 32221000
Q ss_pred CCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeec
Q psy12060 534 LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 613 (978)
Q Consensus 534 ~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~ 613 (978)
...... ......|.|..+.. +|+|.|+|.|.|..+.......|.|.. +|.+...+. ....+..|+.++|.|.+.
T Consensus 184 --~~~~~~-~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~~~~~~l~V~~-~P~~~~~~~-~~~~~~~g~~~~l~C~~~ 257 (331)
T 3u83_A 184 --RNPNGT-VTVISRYRLVPSRE-AHQQSLACIVNYHMDRFKESLTLNVQY-EPEVTIEGF-DGNWYLQRMDVKLTCKAD 257 (331)
T ss_dssp --ECTTSC-EEEEEEEEECCCGG-GTTCEEEEEEEETTEEEEEEEECCEEE-EEEEEEECC-CSCCBTTCCCEEEEEEEE
T ss_pred --ECCCCc-EEEEEEEEEEeccc-cCCCEEEEEEecCCCcceeeEEEEEec-CCeEEEecC-CCceEeCCCeEEEEEeCc
Confidence 001122 22234678887775 899999999999988877777887764 555543332 233478899999999999
Q ss_pred cCCCCe-eEEeeCCEEecCCCcEEEeecCcEEEc-cccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCc
Q psy12060 614 AAPKPK-FVWKKDGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680 (978)
Q Consensus 614 ~~p~~~-i~W~~~g~~~~~~~~~~~~~~~~l~i~-~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 680 (978)
+.|.|. +.|++++..+.... ...+++|.|. ++..+|+|.|+|.|.|..|.....+.|.|...+.
T Consensus 258 g~p~p~~i~W~~~~~~~~~~~---~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 258 ANPPATEYHWTTLNGSLPKGV---EAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAA 323 (331)
T ss_dssp EESCCCEEEEEETTBSCCTTE---EEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC---
T ss_pred CCCCCCEEEEEECCCcccccc---eecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccch
Confidence 999997 99999998876542 2356789999 9999999999999999999998889998876554
No 93
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.95 E-value=6.8e-27 Score=231.60 Aligned_cols=190 Identities=29% Similarity=0.570 Sum_probs=157.7
Q ss_pred EcCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccc-cCceEecccccceeeeecCCceeeEEeeccCC
Q psy12060 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVP 852 (978)
Q Consensus 774 v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p 852 (978)
|.++|.+|.++++.. +.+++.|+|.+|.+++++|.+|.|+|+.... ..|......+. .....+.+ + |.|
T Consensus 2 v~~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~-------~~~~~~~~-~-L~p 71 (205)
T 1cfb_A 2 VQDVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVP-------NTDSSFVV-Q-MSP 71 (205)
T ss_dssp CCCCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEE-------TTCSEEEE-E-CCS
T ss_pred cccCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeeccC-------CCceEEEE-e-CCC
Confidence 578999999999999 9999999999998888999999999987653 67764432221 12345555 8 999
Q ss_pred CceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCcc
Q psy12060 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 932 (978)
Q Consensus 853 ~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~ 932 (978)
++.|.|||+|.|..|.|++|.....++|.+.+|+.+|.++.+...+.++|.|+|++|+..+.||.|++|+|+|+..+...
T Consensus 72 ~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~ 151 (205)
T 1cfb_A 72 WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAA 151 (205)
T ss_dssp SEEEEEEEEEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTC
T ss_pred CCEEEEEEEEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCC
Confidence 99999999999999999999544588899999988999999999999999999999776689999999999999887543
Q ss_pred -ceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCC
Q psy12060 933 -FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976 (978)
Q Consensus 933 -~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S 976 (978)
|....+... . ...+.|.+|.|++.|.|+|+|+|.+|.||+|
T Consensus 152 ~~~~~~~~~~-~--~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 193 (205)
T 1cfb_A 152 AWENNNIFDW-R--QNNIVIADQPTFVKYLIKVVAINDRGESNVA 193 (205)
T ss_dssp CCEEEEECCT-T--CCEEEECSCCSSCEEEEEEEEEETTEECSSC
T ss_pred CcEEEEecCC-C--ccEEEEcCCCCCcEEEEEEEEEcCCCcCCCC
Confidence 765544321 1 2347799999999999999999999999963
No 94
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.95 E-value=4.6e-28 Score=283.29 Aligned_cols=352 Identities=16% Similarity=0.191 Sum_probs=228.1
Q ss_pred eeecCCCeEEEEEeec-------cCCCCeeEEeeCCEEecCCCcEEE-eecCcEEEccccCCCCEEEEEEEEeC--Ccee
Q psy12060 598 TYAGEGGNVTIFCNPE-------AAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNV--HGMD 667 (978)
Q Consensus 598 ~~~~~g~~~~l~C~~~-------~~p~~~i~W~~~g~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~--~g~~ 667 (978)
..+..|++++|.|.+. +.+.+.|.|+++|..+.......+ ...+.|+|.++...|++ |+|.+... .+..
T Consensus 13 ~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~~~~~~~~~~~l~i~~~~~~~~~-y~C~~~~~~~~~~~ 91 (589)
T 3l5h_A 13 PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQ-LTCNILTFGQLEQN 91 (589)
T ss_dssp CCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGGCBCCSSSCCBCCCCCCCSSCCC-CCCC-CCTTCC-CC
T ss_pred CEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHHccccCCcEeEEEEecCCCccee-eEEecccCCCcccE
Confidence 4478899999999987 566789999999977754322111 11345899999888765 88988642 1222
Q ss_pred eeeEEEEEEeCCceeeeCCCceEE--EccccEEEEEEeeecCCcCeEE--EEeeCCEEccccccccccCCeeecCCceEE
Q psy12060 668 ESKGRLIVLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLE 743 (978)
Q Consensus 668 ~~~~~l~v~~~p~~~~~~~~~~~~--~~g~~~~l~C~~~~~p~~~~~~--~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 743 (978)
...+.|.+..+|..+ .++.. .....+.+.|.......+...+ .+...+..... - ...........
T Consensus 92 ~~~~~l~v~~pP~~P----~nl~c~~~~~~~~~~~W~~~~~~~~~~~y~l~~~~~~~~~~~-----c--~~~~~~~~~c~ 160 (589)
T 3l5h_A 92 VYGITIISGLPPEKP----KNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFAD-----C--KAKRDTPTSCT 160 (589)
T ss_dssp CCCCCCCC-CCCCCC----EEEEEEEETTSCEEEEEECCSCCSSCEEEEECCBCSSSBCCC-----E--ECBTTBSSCCB
T ss_pred EEeEEEeccCCCCCC----EeeEEEECCCceEEEEECCCCcCCcCceEEEEEEEcCCCccc-----C--CCCCCCcEEEE
Confidence 233455555544321 11211 1223344444432222111111 11111100000 0 00000112344
Q ss_pred Ee-ccCCCCCEEEEEEEEcCCCceee-eEEEEE--cCCCCCCCceEEE--EeeCCeeEEEeecCCCCCCCceeEEEEEee
Q psy12060 744 IT-NASFADAGEYECVVKSTVGKIST-KTTVIV--EGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIART 817 (978)
Q Consensus 744 i~-~~~~~d~g~Y~c~a~n~~G~~s~-~~~l~v--~~~P~~P~~~~~~--~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~ 817 (978)
|. ++.......|+|.|.|..|.... ...+.. ..+|.+|.++.+. ..+.+++.|+|.+|...++++.+|.|+|+.
T Consensus 161 ~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~ 240 (589)
T 3l5h_A 161 VDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRT 240 (589)
T ss_dssp CCSCCCSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEE
T ss_pred ECCCCchheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECC
Confidence 44 45556677888999999997532 333333 2379999999883 468899999999998777899999999999
Q ss_pred ccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCC--CCCCCCCCCCCCCCceee-
Q psy12060 818 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP--QYNTPADKPYQAPSRIGG- 894 (978)
Q Consensus 818 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~--~~~t~~~~P~~~P~~~~~- 894 (978)
.+...|........ ......+++.+ |.|++.|.|||+|.|..|.|.+|+.+. .+.|.+++|..+|.++..
T Consensus 241 ~~~~~w~~~~~~~~------~~~~~~~~i~~-L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v 313 (589)
T 3l5h_A 241 KDASTWSQIPPEDT------ASTRSSFTVQD-LKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKI 313 (589)
T ss_dssp TTCSCCBCCCTTSS------CSCCSEEEECS-CCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEEC
T ss_pred CCCCCcEEEccccC------cCceeEEEECC-CCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEe
Confidence 88788875432111 12356788999 999999999999999999988765443 457888889888986553
Q ss_pred ---cccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCC
Q psy12060 895 ---GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 971 (978)
Q Consensus 895 ---~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G 971 (978)
...+.++|.|+|+++++.+.||.|.+|+|+|+..+.. +.... .+... +..|.|++.|.|+|+|+|.+|
T Consensus 314 ~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~-~~~~~----~~~~~----~~~l~~~~~Y~~~V~A~n~~G 384 (589)
T 3l5h_A 314 DPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH-LQNYT----VNATK----LTVNLTNDRYLATLTVRNLVG 384 (589)
T ss_dssp CSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSC-CCBCC----CSSSC----CEECCCSSCCCEEEEEEBTTB
T ss_pred ecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCC-ceeec----cCCce----EEEEeCCCCEEEEEEEEeCCc
Confidence 3567789999999988899999999999999876542 33211 11111 223789999999999999999
Q ss_pred CCCCCC
Q psy12060 972 PGPESE 977 (978)
Q Consensus 972 ~gp~S~ 977 (978)
.|++|.
T Consensus 385 ~~~~s~ 390 (589)
T 3l5h_A 385 KSDAAV 390 (589)
T ss_dssp CCCCCC
T ss_pred cCCCeE
Confidence 999885
No 95
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.95 E-value=6.4e-27 Score=249.93 Aligned_cols=261 Identities=19% Similarity=0.271 Sum_probs=193.5
Q ss_pred cccccCCCceeEEEEee-cCCCCeeEEeECCEECCCCCCCCCCCCcEEEec----CEEEEEeCCCCCCCeEEEEEEEcCC
Q psy12060 497 DKHMDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD----NVLTIRYLNPERDPAMYQCRAKNQL 571 (978)
Q Consensus 497 ~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~----~~l~i~~~~~~~d~G~Y~C~a~n~~ 571 (978)
...+.+|+.++|.|... +.|.+.|.|+|++..+.. ..++.+.. ..|.|.++.. +|+|.|+|.+.|..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~-------~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~~~n~~ 81 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTED-------SPRLEVESKGNKTKMTFKDLGM-DDLGIYSCDVTDTD 81 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTT-------CTTEEEEEETTEEEEEESSCCG-GGCEEEEEEESSSC
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCC-------CCCEEEEEeCCEEEEEECcCCc-cCCEEEEEEEEeCC
Confidence 34578999999999876 568999999999999873 33444322 4899999996 89999999999988
Q ss_pred CceeeEEEEEEEEc-----------CCccccCCCCcceeecCCCeEEEEEeec-cCCCCeeEEeeCCEEecCCCcEEEee
Q psy12060 572 KTRYSSAQLRVLTL-----------KPSFKKRPLESETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIFE 639 (978)
Q Consensus 572 g~~~~~~~l~v~~~-----------~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~ 639 (978)
|... +..+.|... +|.+...+ .....+.+|+.+.|.|.+. +.|.+.+.|+++|..+....++.+..
T Consensus 82 g~~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~ 159 (312)
T 2y23_A 82 GIAS-SYLIDEEELKRLLALSHEHKFPTVPVKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHI 159 (312)
T ss_dssp CCCE-EEEECHHHHHHHHHHHHHHHSCBCCEEE-EEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEE
T ss_pred CcEE-EEEEEEeeeeeeecccccCCCCcccccc-CCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEE
Confidence 8544 444444210 45444322 1255688999999999999 88999999999999998877766655
Q ss_pred cCc-----EEEccccCCCCEEEEEEEEeCCceeeeeEEEE-------------------EEeCCceeeeCCCceEEEccc
Q psy12060 640 NGN-----LLISPVSRDDSGIYSCTATNVHGMDESKGRLI-------------------VLHGPSYYEQLPPKITIAAHR 695 (978)
Q Consensus 640 ~~~-----l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~-------------------v~~~p~~~~~~~~~~~~~~g~ 695 (978)
+.. |.|.++..+|+|.|+|.|.|..+.......+. ...+|.+... ....+..|+
T Consensus 160 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~v~~G~ 237 (312)
T 2y23_A 160 DRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY--LSWEVTGEC 237 (312)
T ss_dssp ETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE--EEEEEETTT
T ss_pred ccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeec--ceEEEeCCC
Confidence 432 99999999999999999987554443333221 0112333221 236788999
Q ss_pred cEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEc
Q psy12060 696 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775 (978)
Q Consensus 696 ~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~ 775 (978)
.+.|.|.+.+.|.+ ..+.|+++|..+..... ..+......|.|.++..+|+|.|+|.|.|..|..++++.|.++
T Consensus 238 ~~~l~C~~~~~p~~-~~v~W~~~g~~~~~~~~-----~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 238 NVLLKCKVANIKKE-THIVWYKDEREISVDEK-----HDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp EEEEEEEEESCCSS-CEEEEEETTEEEEEECC-----C----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred EEEEEEEEcCCCCC-CEEEEeeCCEECCCCCc-----EEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 99999999998765 35699999998864221 1122223699999999999999999999999999999988765
No 96
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.95 E-value=4.1e-27 Score=252.79 Aligned_cols=260 Identities=18% Similarity=0.320 Sum_probs=173.1
Q ss_pred CCCCCCCcEEEEEEEeec-CCCeeEEEEcCccCCC---------Cceee---------ecccEEEeCCCCCCCCeEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGY-PVPSYNWTRRGSPLPR---------NAYFE---------NFNRILTIPNVKVEDQGEYICR 469 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~~l~~---------~~~~~---------~~~~~L~i~~~~~~d~G~Y~C~ 469 (978)
..+.+|++++|.|.+.+. |.+.|+|+|++.++.. ..+.. .....|.|.+++.+|+|.|+|.
T Consensus 13 ~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 92 (327)
T 2wng_A 13 VSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCV 92 (327)
T ss_dssp EEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEE
T ss_pred eEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEE
Confidence 356799999999999987 8899999999875421 01111 3345799999999999999999
Q ss_pred EEeCCCce-----EEEEEEEEEeecee-eccCCcccccCCCceeEEEEeecCCCC--eeEEeECCEECCCCCCC--CCCC
Q psy12060 470 ASNDRSAL-----ESSVTISIQAEPNF-TIPLTDKHMDNQADLTWTCEAFGVPDV--TYSWFRNGELLNSETLP--LEDQ 539 (978)
Q Consensus 470 a~n~~g~~-----~~~~~l~V~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~g~~~~~~~~~--~~~~ 539 (978)
|.|..+.. ...+.|.|..+|.. .+......+.+|+.++|.|.+.|.|++ .++|+|+|..+...... ....
T Consensus 93 a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~ 172 (327)
T 2wng_A 93 KFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGE 172 (327)
T ss_dssp EEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSC
T ss_pred eecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccC
Confidence 99986642 13467888776542 112223568899999999999988655 89999999998643110 0011
Q ss_pred CcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCce---eeEEEEEE-EEcCCccccCCCCcceeecCCCeEEEEEeeccC
Q psy12060 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR---YSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 615 (978)
Q Consensus 540 ~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~---~~~~~l~v-~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 615 (978)
.........|.|..... +|.|.|+|.|.|..+.. ..+..+.+ ...+|.+...+.. +.+|+.++|.|.+.|.
T Consensus 173 ~~~~~~~s~L~i~~~~~-d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~----~~~G~~v~l~C~~~g~ 247 (327)
T 2wng_A 173 SVSYSIHSTAKVVLTRE-DVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP----VRAENQVNVTCQVRKF 247 (327)
T ss_dssp CSCEEEEEEEEEECCTT-GGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC----CSSTTCCEEEEEEEEE
T ss_pred CCceEEEEEEEEechhc-CcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC----cCCCCcEEEEEEEccc
Confidence 11122233577776653 67899999999987753 22333321 1234554433211 6789999999999995
Q ss_pred -CCC-eeEEeeCCEEecCCC--cEEEeecC------cEEEccccCCCCEEEEEEEEeCCceeeeeEEE
Q psy12060 616 -PKP-KFVWKKDGNIIGSGG--RRKIFENG------NLLISPVSRDDSGIYSCTATNVHGMDESKGRL 673 (978)
Q Consensus 616 -p~~-~i~W~~~g~~~~~~~--~~~~~~~~------~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 673 (978)
|++ .|.|+++|..+.... ......++ .|.|..+..+|+|.|+|.|.|..|.......+
T Consensus 248 ~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~ 315 (327)
T 2wng_A 248 YPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHD 315 (327)
T ss_dssp BSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEEE
T ss_pred cCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhheE
Confidence 444 899999999876431 12222233 37888899999999999999999876554433
No 97
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=3.8e-27 Score=248.94 Aligned_cols=271 Identities=15% Similarity=0.103 Sum_probs=188.9
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (978)
+|.|...|.+..+. +|++++|.|.+.|. +.|++++.... .+. .....++|.|.++ +.+|
T Consensus 4 ~P~i~~~~~~~~v~-----~G~~v~L~C~~~~~----v~W~~~~~~~~-----~~~------~~~~~~~L~i~~~-~~~d 62 (292)
T 4dkd_C 4 IPVIEPSVPELVVK-----PGATVTLRCVGNGS----VEWDGPPSPHW-----TLY------SDGSSSILSTNNA-TFQN 62 (292)
T ss_dssp CCEEESCCSSCEEC-----TTCCEEEEEECSSC----CCBCCCCCSSC-----EEC------CBTTEEEEEESSC-CGGG
T ss_pred CceecCCCCeEEEc-----CCCcEEEEEcCCCc----eEEccCCCCce-----EEe------ccCceEEEEEccc-cccc
Confidence 58888888777654 45669999999874 99998763210 000 0112358999997 8999
Q ss_pred CeEEEEEEEeCceeEEeEEEEEEEeeeccc-ccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEE
Q psy12060 269 RGSYHCKASNKFGSIISESVQLAFGFIGEF-NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347 (978)
Q Consensus 269 ~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~-~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~ 347 (978)
+|.|+|.|.|..|.. +..+.|.|..++.. ........+.+|+.++|.|.+....+.+.|.|++++... +....+...
T Consensus 63 ~G~Y~C~~~n~~~~~-~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~-~~~~~~~~~ 140 (292)
T 4dkd_C 63 TGTYRCTEPGDPLGG-SAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRP-LMRHTNYSF 140 (292)
T ss_dssp CSCEEECCCC----C-CEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCC-CCSSCCEEC
T ss_pred CEEEEEEEccCCCCc-ceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCc-cccCCcccc
Confidence 999999999988765 66777877765542 333445667889999999998542222789999985332 234455666
Q ss_pred eeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCC-ccccccCCCCCCCCCCCCCCCCcEEEEEEEeec
Q psy12060 348 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN-FQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGY 426 (978)
Q Consensus 348 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~-~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~ 426 (978)
..++.|.|.+++.+|+|.|+|.|.|..+.. .+..+.|.|..... .+.+...+ ....+.+|+.++|.|.+.+.
T Consensus 141 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~--~s~~~~l~V~~~~~~~p~i~~~~-----~~~~~~~g~~v~l~C~~~~~ 213 (292)
T 4dkd_C 141 SPWHGFTIHRAKFIQSQDYQCSALMGGRKV--MSISIRLKVQKVIPGPPALTLVP-----AELVRIRGEAAQIVCSASSV 213 (292)
T ss_dssp CSSSCCEETTCCGGGCSEEEEEECSTTSCE--ECCCEEEEEECCCCSSCEEEEES-----SCBCCCSSSCEEEEEEEEES
T ss_pred cCCceEEECCCCHHHCeEEEEEEEeCCCce--eEEEEEEEEeCCCCCCCeEEccC-----CceeEecCCCEEEEEEecCC
Confidence 667789999999999999999999875432 23357888876221 11111111 12345699999999999986
Q ss_pred CC-CeeEEEEcCccCCCCceee------ecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeec
Q psy12060 427 PV-PSYNWTRRGSPLPRNAYFE------NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489 (978)
Q Consensus 427 p~-~~v~W~~~~~~l~~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 489 (978)
|. +.+.|++++..+....... ....+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+.
T Consensus 214 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 214 DVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp SSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred CCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCC
Confidence 65 4789999988775443211 123589999999999999999999999999999999887654
No 98
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=2.4e-26 Score=242.20 Aligned_cols=255 Identities=15% Similarity=0.189 Sum_probs=164.2
Q ss_pred cccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCCCeEEEEEEEeCceeEEeE
Q psy12060 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE 286 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~ 286 (978)
.+|++++|+|.+.|. |+|+|++..+... .... ... ...++|.|.++ +.+|+|.|+|.|.|..|.....
T Consensus 13 ~~G~~v~L~C~~~~~----v~W~~~~~~~~~~--~~~~--~~~---~~~~~L~i~~~-~~~D~G~Y~C~a~n~~g~~~~~ 80 (289)
T 3mjg_X 13 NVSSTFVLTCSGSAP----VVWERMSQEPPQE--MAKA--QDG---TFSSVLTLTNL-TGLDTGEYFCTHNDSRGLETDE 80 (289)
T ss_dssp CTTCCEEEEEEESSC----CEEEBTTBCCSEE--EEEC--TTS---CEEEEEEECSC-CGGGCEEEEEECCC------CC
T ss_pred eCCCcEEEEEeccce----EEEECCCCCcccc--eecc--CCC---ceeEEEEEccC-ChhhCEEEEEEEcccCCCCcCc
Confidence 346779999999875 9999999765210 0000 000 12357999997 8999999999999998764443
Q ss_pred EEEEEEeee--cccccCCCC----eeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeee
Q psy12060 287 SVQLAFGFI--GEFNLKRAP----EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQ 360 (978)
Q Consensus 287 ~~~l~v~~~--~~~~~~~~~----~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 360 (978)
...+.+.+. ........+ ..+.+|+.++|.|.+. .|.+.++|++++....+.. .......+. ..
T Consensus 81 ~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~--~p~~~v~w~~~~~~~~~~~----~~~~~~~~~----~~ 150 (289)
T 3mjg_X 81 RKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT--DPQLVVTLHEKKGDVALPV----PYDHQRGFS----GI 150 (289)
T ss_dssp CEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS--CTTSCEEEEESSCCSCCCC----CEETTTEEE----EC
T ss_pred EEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC--CCCceEEEEeCCCCCccce----eecCCcCee----ee
Confidence 444444333 221111111 4477899999999985 4667778877642211110 011111111 46
Q ss_pred ecceeeEEEEEeecccccccCCceeEEEccC-CCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCcc
Q psy12060 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH-SNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSP 439 (978)
Q Consensus 361 ~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~-~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~ 439 (978)
+|+|.|+|.|.|..+.. .+..+.|.|... ++...+. + ....+.+|++++|.|.+.|.|.|.|+|++++..
T Consensus 151 ~d~G~Y~C~a~n~~~~~--~s~~~~l~v~~~~~p~i~~~-~------~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~ 221 (289)
T 3mjg_X 151 FEDRSYICKTTIGDREV--DSDAYYVYRLQVSSINVSVN-A------VQTVVRQGENITLMCIVIGNEVVNFEWTYPRKE 221 (289)
T ss_dssp CCSSEEEEEEEETTEEE--ECCCEEEEECCCCCCCCEEE-E------SCSEEETTSCEEEEEEEESCSSBEEEEECTTSS
T ss_pred ccCcEEEEEEEeCCcee--eeeeEEEEecCCCCCCcEEe-C------CcceeEcCCCEEEEEEECCCCCcceEEEcCCcc
Confidence 79999999998865432 233356777652 1111111 1 123577999999999999999999999988765
Q ss_pred CCCCce----e-----eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceee
Q psy12060 440 LPRNAY----F-----ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFT 492 (978)
Q Consensus 440 l~~~~~----~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 492 (978)
...... . .....+|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~ 283 (289)
T 3mjg_X 222 SGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESGH 283 (289)
T ss_dssp SSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC---
T ss_pred CCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecCc
Confidence 433211 1 1234689999999999999999999999999999999999887654
No 99
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.94 E-value=5.1e-27 Score=247.95 Aligned_cols=274 Identities=17% Similarity=0.194 Sum_probs=198.5
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE--ecCEEEEEeCCCCCCCeEEE
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQ 564 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~ 564 (978)
.+|.|...+....+.+|++++|.|.+.+. +.|++++.... .... ....|.|.++.. +|+|.|+
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~----------~~~~~~~~~~L~i~~~~~-~d~G~Y~ 67 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSPHW----------TLYSDGSSSILSTNNATF-QNTGTYR 67 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCSSC----------EECCBTTEEEEEESSCCG-GGCSCEE
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCce----------EEeccCceEEEEEccccc-ccCEEEE
Confidence 47888888888889999999999998873 99997653211 1111 124899999986 9999999
Q ss_pred EEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCC--CeeEEeeC-CEEecCCCcEEEeecC
Q psy12060 565 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKD-GNIIGSGGRRKIFENG 641 (978)
Q Consensus 565 C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~i~W~~~-g~~~~~~~~~~~~~~~ 641 (978)
|.+.|..+.......|.|...+..+... .....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+....+.....++
T Consensus 68 C~~~n~~~~~~~~~~l~V~~~~~~~~~~--~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~ 144 (292)
T 4dkd_C 68 CTEPGDPLGGSAAIHLYVKDPARPWNVL--AQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWH 144 (292)
T ss_dssp ECCCC----CCEEECCEECCSSCCEEES--CSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSS
T ss_pred EEEccCCCCcceEEEEEEcCcccccccc--CCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCc
Confidence 9999988877777777777533223332 23566889999999999988 44 78999987 6666666666666677
Q ss_pred cEEEccccCCCCEEEEEEEEeCCceeee-eEEEEEEe----CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEe
Q psy12060 642 NLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 716 (978)
Q Consensus 642 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~ 716 (978)
.|.|.++..+|+|.|+|.|.|..|.... .+.|.|.. +|.+. ..+....+..|+.+.|.|.+.+.| +.+.|.|+
T Consensus 145 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~-~~~~~~~~~~g~~v~l~C~~~~~~-~~~~~~w~ 222 (292)
T 4dkd_C 145 GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALT-LVPAELVRIRGEAAQIVCSASSVD-VNFDVFLQ 222 (292)
T ss_dssp CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEE-EESSCBCCCSSSCEEEEEEEEESS-SCCEEECC
T ss_pred eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEE-ccCCceeEecCCCEEEEEEecCCC-CceEEEEe
Confidence 7999999999999999999998776544 67888876 55443 334455567999999999999876 45678999
Q ss_pred eCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCC
Q psy12060 717 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781 (978)
Q Consensus 717 ~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P 781 (978)
+++..+...........+ ......|.|.++..+|+|.|+|.|.|..|..+.++.|.|.+...++
T Consensus 223 ~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~ 286 (292)
T 4dkd_C 223 HNNTKLAIPQQSDFHNNR-YQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGNS 286 (292)
T ss_dssp BSSCCCCCCBEEEEETTE-EEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-------
T ss_pred CCCcccccCccceeccce-eeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCCcc
Confidence 998766432111011111 1123589999999999999999999999999999999998776554
No 100
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=243.37 Aligned_cols=253 Identities=17% Similarity=0.212 Sum_probs=172.7
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeec---ccEEEeCCCCCCCCeEEEEEEEeCCCc---eEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENF---NRILTIPNVKVEDQGEYICRASNDRSA---LESSVT 482 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~---~~~~~~ 482 (978)
..+.+|++++|.|.+.|. |+|+|++..+......... ..+|.|.+++.+|+|.|+|.|.|..|. ...++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~ 85 (289)
T 3mjg_X 10 LVLNVSSTFVLTCSGSAP----VVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLY 85 (289)
T ss_dssp EECCTTCCEEEEEEESSC----CEEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCEEEE
T ss_pred EEEeCCCcEEEEEeccce----EEEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEE
Confidence 356799999999998874 9999999987432222111 368999999999999999999998876 334555
Q ss_pred EEEEeeceeeccCC-c---ccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCC
Q psy12060 483 ISIQAEPNFTIPLT-D---KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 558 (978)
Q Consensus 483 l~V~~~p~~~~~~~-~---~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 558 (978)
|.|..++....... . ..+.+|+++.|.|.+. .|.+.++|++++...... ..+... ..+. .. .
T Consensus 86 v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~-------~~~~~~-~~~~----~~-~ 151 (289)
T 3mjg_X 86 IFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP-------VPYDHQ-RGFS----GI-F 151 (289)
T ss_dssp EECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC-------CCEETT-TEEE----EC-C
T ss_pred EEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc-------eeecCC-cCee----ee-c
Confidence 55553332222111 1 4588999999999998 678899999865222210 011111 1111 23 7
Q ss_pred CCeEEEEEEEcCCCceeeE-EEEEEEE-cCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCc-E
Q psy12060 559 DPAMYQCRAKNQLKTRYSS-AQLRVLT-LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR-R 635 (978)
Q Consensus 559 d~G~Y~C~a~n~~g~~~~~-~~l~v~~-~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~-~ 635 (978)
|+|.|+|.|.|..+..... ..+.|.. .+|.+...+. ...+.+|++++|.|.+.+.|.|.+.|++++........ .
T Consensus 152 d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~--~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~ 229 (289)
T 3mjg_X 152 EDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAV--QTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPV 229 (289)
T ss_dssp CSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEES--CSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCE
T ss_pred cCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCC--cceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCccccc
Confidence 9999999999876554332 3444443 2344443332 24578999999999999999999999987765433211 1
Q ss_pred -EE------eecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCce
Q psy12060 636 -KI------FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681 (978)
Q Consensus 636 -~~------~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 681 (978)
.. ...++|.|.++..+|+|.|+|.|.|..|....++.|.|...|..
T Consensus 230 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 230 TDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESG 282 (289)
T ss_dssp EEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC--
T ss_pred ccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecC
Confidence 11 12346999999999999999999999999999999999876653
No 101
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.94 E-value=1.2e-26 Score=247.55 Aligned_cols=256 Identities=15% Similarity=0.188 Sum_probs=173.4
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCC-----CceEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDR-----SALESSVTIS 484 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~-----g~~~~~~~l~ 484 (978)
.+.+|++++|.|.+.+. .+.+.|+|+|..+............|.|.+++.+|+|.|+|.|.|.. +..+..+.|.
T Consensus 34 ~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~ 112 (316)
T 3vh8_G 34 VVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIM 112 (316)
T ss_dssp EEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEE
T ss_pred ccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEE
Confidence 46799999999999887 67999999998875433333446789999999999999999998642 2344567777
Q ss_pred EEe---eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcE--EEecCEEEEEeCCCCCC
Q psy12060 485 IQA---EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY--FIQDNVLTIRYLNPERD 559 (978)
Q Consensus 485 V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~~d 559 (978)
|.. +|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+..... .... ......|.|.++.. +|
T Consensus 113 V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~----~~~~~~~~~~~~L~i~~v~~-~D 185 (316)
T 3vh8_G 113 VTGNHRKPSLLAHPGP-LVKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRL----VGQIHDGVSKANFSIGPMML-AL 185 (316)
T ss_dssp EECSSCCCEEEEESCS-EEETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEE----ECEEETTEEEEEEEECSCCG-GG
T ss_pred EecCCCCCeEEecCCC-ccCCCCeEEEEEcCCC-CCcEEEEEECCCcccccee----eeeecCCCceEEEEECCCCh-hh
Confidence 764 3556554444 3789999999999854 6779999999987642100 0000 01345799999986 99
Q ss_pred CeEEEEEEEcCCCce-----eeEEEEEEEEc--CCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCC
Q psy12060 560 PAMYQCRAKNQLKTR-----YSSAQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG 632 (978)
Q Consensus 560 ~G~Y~C~a~n~~g~~-----~~~~~l~v~~~--~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~ 632 (978)
+|.|+|.|.|..|.. .....|.|... +|.+...+. ..+.+|++++|.|.+. .|.+.+.|+|+|..+...
T Consensus 186 ~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~---~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~ 261 (316)
T 3vh8_G 186 AGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG---PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERR 261 (316)
T ss_dssp CEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC---SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEE
T ss_pred CceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC---CeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCc
Confidence 999999999987742 33455666532 333333221 2468899999999997 477899999999876532
Q ss_pred CcEEEee----cCcEEEccccCCCCEEEEEEEEeCCce-----eeeeEEEEEEeCC
Q psy12060 633 GRRKIFE----NGNLLISPVSRDDSGIYSCTATNVHGM-----DESKGRLIVLHGP 679 (978)
Q Consensus 633 ~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~v~~~p 679 (978)
....... .+.|.|.+++ |+|.|+|.|.|..+. .+..+.|.|..+|
T Consensus 262 ~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 262 LPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp EECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred eeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 2111111 2469999999 999999999997653 2334566665544
No 102
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=231.54 Aligned_cols=266 Identities=20% Similarity=0.283 Sum_probs=192.7
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE---ecC--EEEEEeCCCCCCCeE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI---QDN--VLTIRYLNPERDPAM 562 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~---~~~--~l~i~~~~~~~d~G~ 562 (978)
+|.|...+.+..+.+|++++|.|.+.|.|.+.+.|+|+|..+... ..++.+ .++ .|.|.++.. +|+|.
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~------~~~~~~~~~~~~~~~L~i~~v~~-~d~G~ 76 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIAD------GLKYRIQEFKGGYHQLIIASVTD-DDATV 76 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCC------SSSEEEEEETTTEEEEEESSCCG-GGCSE
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccC------CCeEEEEECCCCEEEEEEccCCh-hhCeE
Confidence 678888888889999999999999999999999999999988632 223322 222 899999996 99999
Q ss_pred EEEEEEcCCCceeeEEEEEEEEcCCccccCC---CCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEee
Q psy12060 563 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE 639 (978)
Q Consensus 563 Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~---~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~ 639 (978)
|+|.|.|..|.....+.|.|.. +|.+.... ......+..|+.+.|.|.+.|.|.+.+.|++++..+....++.+..
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~ 155 (305)
T 2nzi_A 77 YQVRATNQGGSVSGTASLEVEV-PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIV 155 (305)
T ss_dssp EEEEEEETTEEEEEEEEEEECE-EEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEE
T ss_pred EEEEEEcCCCCccceEEEEEec-CCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEE
Confidence 9999999988877777887764 33322111 1134557889999999999999999999999999888777666543
Q ss_pred ---cCcEEEcc-ccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecC--CcCeEE
Q psy12060 640 ---NGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE--LLDVAY 713 (978)
Q Consensus 640 ---~~~l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~~ 713 (978)
.++|.|.+ +..+|+|.|+|.|.|..|.....+.|.|...|..+... .+....+..+.|.|...... .+...+
T Consensus 156 ~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~--~~~~~~~~~v~l~w~~p~~~g~~~i~~y 233 (305)
T 2nzi_A 156 TRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGV--KVSDVSRDSVNLTWTEPASDGGSKITNY 233 (305)
T ss_dssp CSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEE--EEESCCSSCEEEEEECCSCCSBSCEEEE
T ss_pred cCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCc--eeeeccCCEEEEEEcCCccCCCCceeEE
Confidence 34699999 99999999999999999999999999998776533221 12223567788888753211 111111
Q ss_pred EEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeee
Q psy12060 714 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769 (978)
Q Consensus 714 ~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~ 769 (978)
.+.. .+....... .........+.|.++...+.|.|+|.|.|..|....+
T Consensus 234 ~v~~--~~~~~~~w~----~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 234 IVEK--CATTAERWL----RVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp EEEE--EETTSCCEE----EEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred EEEE--ecCCCCccE----ECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 1111 111110000 0001125689999999999999999999999976544
No 103
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.93 E-value=3.3e-25 Score=220.21 Aligned_cols=194 Identities=23% Similarity=0.272 Sum_probs=153.4
Q ss_pred EEEEcCCCCCCCceEEEEeeCCeeEEEeecCCCCCC-CceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeec
Q psy12060 771 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR-PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 849 (978)
Q Consensus 771 ~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (978)
.+...++|.+|.++++...+. ++.|+|.+|.+.++ +|.+|.|+|+..+...|......... ......+++.+
T Consensus 2 ~l~~~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~- 74 (209)
T 2vkw_A 2 PLAQADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE-----ASMEGIVTIVG- 74 (209)
T ss_dssp ---CCCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHH-----HHHHSEEEECC-
T ss_pred CccccCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccC-----CCccceEEeCC-
Confidence 356778999999999987776 69999999975544 69999999998888888665321100 01245788999
Q ss_pred cCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecC
Q psy12060 850 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929 (978)
Q Consensus 850 L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~ 929 (978)
|.|++.|.|+|+|.|..|.|++|... .++|.+..++.+|.++.+...+.++|.|+|++ |.+.||.|++|+|+|+. +
T Consensus 75 L~p~t~Y~~~V~A~n~~G~~~~s~~~-~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~~~~-~ 150 (209)
T 2vkw_A 75 LKPETTYAVRLAALNGKGLGEISAAS-EFKTQPVREPSAPKLEGQMGEDGNSIKVNLIK--QDDGGSPIRHYLVRYRA-L 150 (209)
T ss_dssp CCTTCEEEEEEEEEETTEECCCCCCE-EEECCCSCSCCCCEEEEEECTTSSCEEEEEEC--CCCTTSCCCEEEEEEEE-T
T ss_pred CCCCCeEEEEEEEEcCCcccCCcccc-cccccCCCCCCCCcccccccccCCeEEEEEEC--cccCCCCCceEEEEEEC-C
Confidence 99999999999999999999998876 56777663457888899988999999999999 47889999999999998 5
Q ss_pred CccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
...|...... ..+. ..+.|.+|.|++.|.|+|+|+|.+|.|++|++
T Consensus 151 ~~~~~~~~~~-~~~~--~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 196 (209)
T 2vkw_A 151 SSEWKPEIRL-PSGS--DHVMLKSLDWNAEYEVYVVAENQQGKSKAAHF 196 (209)
T ss_dssp TSCCCCCEEE-CTTC--CEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred CCCCceeeec-CCCc--cEEEecCCCCCCEEEEEEEEEeCCccCCcchh
Confidence 5556543322 1222 34679999999999999999999999999863
No 104
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.92 E-value=5.9e-25 Score=218.72 Aligned_cols=186 Identities=23% Similarity=0.254 Sum_probs=149.2
Q ss_pred CCCCCCCceEEEEeeCCeeEEEeecCCCC----CCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccC
Q psy12060 776 GPPGLPGGVQVVEVHKTSATIQWTDGATN----GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 851 (978)
Q Consensus 776 ~~P~~P~~~~~~~~~~~~v~l~W~~p~~~----~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 851 (978)
.||.+|.++++...+.+++.|+|.+|... ++++.+|.|+|+..+...|..... ......+++.+ |.
T Consensus 3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~i~~-L~ 72 (211)
T 3p4l_A 3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA---------NATTLSYLVTG-LK 72 (211)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE---------EESSSEEEECS-CC
T ss_pred CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe---------CCCceEEEecC-cC
Confidence 57889999999999999999999997633 578999999999865543321111 12456789999 99
Q ss_pred CCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeeccc--ccCcEEEEEEeCCCCCCCCCcceEEEEEEecC
Q psy12060 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG--KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929 (978)
Q Consensus 852 p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~--~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~ 929 (978)
|++.|.|+|+|.|..|.|++|... .++|.+..|..+|.++.+... +.++|.|+|++ +...||.|++|+|+|+..+
T Consensus 73 p~t~Y~~~V~A~n~~g~~~~S~~~-~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~ 149 (211)
T 3p4l_A 73 PNTLYEFSVMVTKGRRSSTWSMTA-HGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQP--PSEANGKITGYIIYYSTDV 149 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCE-EEECCCCCCCSCCEEEEEEEETTEEEEEEEEEEC--CTTCCSCCCEEEEEEESCT
T ss_pred CCCEEEEEEEEEcCCCCCccceeE-eeecccCCCCCCCcceEEEecCCCCCEEEEEECC--CCCCCCCEEEEEEEEEECC
Confidence 999999999999999999988876 788889999889999999877 47899999998 4568899999999999876
Q ss_pred Ccc---ceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 930 DTE---FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 930 ~~~---~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
... |....+. .+. ..+.|.+|.|++.|.|+|+|+|.+|.||+|++
T Consensus 150 ~~~~~~~~~~~~~--~~~--~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 197 (211)
T 3p4l_A 150 NAEIHDWVIEPVV--GNR--LTHQIQELTLDTPYYFKIQARNSKGMGPMSEA 197 (211)
T ss_dssp TSCGGGSEEEEEE--SSC--SEEEECCCCTTCEEEEEEEEEETTEECCCCCC
T ss_pred CCCCCceEEEEec--CCe--eEEEEcCCCCCCEEEEEEEEEcCCccCCCCCC
Confidence 442 3322222 222 34779999999999999999999999999975
No 105
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.92 E-value=4.6e-24 Score=213.01 Aligned_cols=196 Identities=17% Similarity=0.260 Sum_probs=154.7
Q ss_pred CCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccc-cCceEecccccceeee---ecCCceeeEEeeccCCC
Q psy12060 778 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVD---RYTGRKEASIENVLVPW 853 (978)
Q Consensus 778 P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~---~~~~~~~~~~~~~L~p~ 853 (978)
+.||.++++..++.+++.|+|.+|.+.|+++.+|.|+|+..+. ..|......+...... .......+++.+ |.|+
T Consensus 2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~ 80 (214)
T 2ibg_A 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTD-LKPQ 80 (214)
T ss_dssp CCCCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECS-CCTT
T ss_pred CCCCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecC-CcCC
Confidence 4677788888899999999999998888899999999998654 7887765432110000 001345678999 9999
Q ss_pred ceeEEEEEEecCCccCCCCCCCCCCCCCCC---CCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCC
Q psy12060 854 STYEFKVIAGNELGYGEPSSPSPQYNTPAD---KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930 (978)
Q Consensus 854 ~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~---~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~ 930 (978)
+.|.|+|+|.|..|.|..+..+..+.+... .|+.+|.++.+...+.++|.|+|++|+ .+.|+.|++|.|+|+..+.
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~~ 159 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLAS-DADEHLITGYYAYYRPSSS 159 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCT-TCCGGGCCEEEEEEEETTC
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCC-ccCCCCcceEEEEEEECCC
Confidence 999999999999999988876544554433 355688999999999999999999965 6789999999999998876
Q ss_pred -ccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 931 -TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 931 -~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
..|....+... .. ..+.|.+|.|++.|.|+|+|+|.+|.|++|++
T Consensus 160 ~~~~~~~~~~~~-~~--~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 205 (214)
T 2ibg_A 160 AGEYFKATIEGA-HA--RSFKIAPLETATMYEFKLQSFSAASASEFSAL 205 (214)
T ss_dssp CSCCEEEEEECT-TC--CEEEECSCCTTCEEEEEEEEECSSCBCCCCCC
T ss_pred CcceEEeeccCC-cc--eEEEeCCCCCCCEEEEEEEEEcCCccCCCcce
Confidence 67776554331 12 34679999999999999999999999999974
No 106
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.92 E-value=5.3e-24 Score=233.98 Aligned_cols=263 Identities=13% Similarity=0.116 Sum_probs=193.3
Q ss_pred CCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCC
Q psy12060 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 764 (978)
Q Consensus 685 ~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G 764 (978)
.|....+..|+.++|.|.+. . + .+.|+++|..+... ++......|+|.++...|+|.|.|.+.+ +
T Consensus 209 ~P~~~~v~~Gs~vtl~C~a~-~--~--~I~W~~ng~~i~~~--------ri~~~~~~L~I~nl~~sd~g~y~~~C~~--~ 273 (488)
T 2q7n_A 209 FPQDKVVLAGSNMTICCMSP-T--K--VLSGQIGNTLRPLI--------HLYGQTVAIHILNIPVSENSGTNIIFIT--D 273 (488)
T ss_dssp ECTTCEEESSCCCEEEECCS-S--C--EEEEEETTEECCCE--------ECSSSCEEEECCSCCCCCSSCEEEEEEE--S
T ss_pred CCCCCEEcCCCCEEEEEECC-C--C--EEEEEECCEECchh--------hccceEEEEEEeCCCcccCCcEEEEEEc--C
Confidence 45556688999999999998 2 2 56999999887542 2333446899999999999888887763 3
Q ss_pred ceeeeEEEEEcCCCCCCCceEEEEeeCCeeEEEeecCCCC---CCCceeEEEEEeeccc-cCceEecccccceeeeecCC
Q psy12060 765 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN---GRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 840 (978)
Q Consensus 765 ~~s~~~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~---~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~ 840 (978)
.....+.+.+..||++|.++.+.....++++++|.+|.+. |.+++.|.|+|+..+. ..|..... ....
T Consensus 274 ~~i~~~~l~v~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~~--------~~~~ 345 (488)
T 2q7n_A 274 DDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEG--------LTNE 345 (488)
T ss_dssp SCEEEEEEEEECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSSC--------CCSS
T ss_pred CeEEEEEEEeeCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCccccc--------cCCc
Confidence 3344788889999999999998877889999999998876 3478999999976533 22321110 0012
Q ss_pred ceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcce
Q psy12060 841 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 920 (978)
Q Consensus 841 ~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~ 920 (978)
....++.. +...+.|.|+|.|.|..|.++ |. . .+.+.+.+++.||.++++...+.+++.|+|++| ...+|.+++
T Consensus 346 ~~~ct~~l-~~~~t~Y~f~V~A~N~~G~~~-S~-~-~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP--~~~~g~~l~ 419 (488)
T 2q7n_A 346 TYRLGVQM-HPGQEIHNFTLTGRNPLGQAQ-SA-V-VINVTERVAPHDPTSLKVKDINSTVVTFSWYLP--GNFTKINLL 419 (488)
T ss_dssp CEEEEEEC-CSSCCCCEEEEEEEETTEEEE-EE-E-ECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEE--EECSSSEEE
T ss_pred eEEEEEcC-CCCccEEEEEEEEEeCCCCcc-ce-E-EEEecCCCCCCCCeEEEEEecCCCEEEEEEeCC--CCCCCcceE
Confidence 33444433 433699999999999999955 42 2 455566677799999999888899999999994 345788999
Q ss_pred EEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCC---CCCC
Q psy12060 921 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG---PESE 977 (978)
Q Consensus 921 Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g---p~S~ 977 (978)
|.|+|+..+...|...............+.|.+|.|++.|.|+|+|.| .|.| ++|+
T Consensus 420 YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~ 478 (488)
T 2q7n_A 420 CQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSD 478 (488)
T ss_dssp EEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCC
T ss_pred EEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcC
Confidence 999999887666643211111122334458999999999999999999 9996 5554
No 107
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.91 E-value=1.5e-23 Score=206.51 Aligned_cols=186 Identities=23% Similarity=0.370 Sum_probs=152.3
Q ss_pred cCCCCCCCceEEEEeeCCeeEEEeecCC-CCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCC
Q psy12060 775 EGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853 (978)
Q Consensus 775 ~~~P~~P~~~~~~~~~~~~v~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~ 853 (978)
.++|.+|.++++...+.+++.|+|.+|. ++|.++.+|.|+|+..+...|...... .....+++.+ |.|+
T Consensus 3 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~~-L~p~ 72 (197)
T 3lpw_A 3 MDTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN---------CHKTSWKVDQ-LQEG 72 (197)
T ss_dssp CCSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE---------ECSSEEEECC-CCTT
T ss_pred CCCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC---------CCccEEEEcC-CCCC
Confidence 4689999999999999999999999986 445579999999998877777655321 2457789999 9999
Q ss_pred ceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccc
Q psy12060 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933 (978)
Q Consensus 854 ~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~ 933 (978)
+.|.|+|+|.|..|.|.++... .+.+....| .+|.++.+...+.+++.|+|++| ....++.|.+|.|+|+..+...|
T Consensus 73 t~Y~~~V~a~~~~g~~~~s~~~-~~~t~~~~p-~~p~~~~~~~~~~~~v~l~W~~p-~~~~~~~i~~Y~v~~~~~~~~~~ 149 (197)
T 3lpw_A 73 CSYYFRVLAENEYGIGLPAETA-ESVKASERP-LPPGKITLMDVTRNSVSLSWEKP-EHDGGSRILGYIVEMQTKGSDKW 149 (197)
T ss_dssp CEEEEEEEEEETTEECCCEECS-SCEESCCCC-CCCSCEEEEEECSSCEEEEECCC-SCCTTSCCCEEEEEEEETTCSCC
T ss_pred CEEEEEEEEEcCccccCCCCCc-cceecCCCC-CCCcccEEEeccCCeEEEEecCC-CcCCCCcccEEEEEEEeCCCCce
Confidence 9999999999999999988765 445555555 68999999889999999999983 44445699999999999887777
Q ss_pred eeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
...... + ...+.+.+|.|++.|.|+|+|.|.+|.|++|++
T Consensus 150 ~~~~~~---~--~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 189 (197)
T 3lpw_A 150 ATCATV---K--VTEATITGLIQGEEYSFRVSAQNEKGISDPRQL 189 (197)
T ss_dssp EEEEEE---S--SSEEEECCCCTTCEEEEEEEEEETTEECCCEEC
T ss_pred EEeecc---c--ccEEEeCCcCCCCEEEEEEEEEeCCccCCCccC
Confidence 654322 1 234679999999999999999999999999853
No 108
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.91 E-value=1.1e-21 Score=214.89 Aligned_cols=297 Identities=13% Similarity=0.114 Sum_probs=209.8
Q ss_pred CcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEE--ccccEEEEEEeeec-CCcCeEEEEee
Q psy12060 641 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA--AHRNLQLRCSAHTE-ELLDVAYIWTH 717 (978)
Q Consensus 641 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~--~g~~~~l~C~~~~~-p~~~~~~~W~~ 717 (978)
..+.|.++.......|+..|.|..|.............| .+..+.+. ....+.|.|..... +...+.+.|..
T Consensus 59 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p-----~p~~l~~~~~~~~si~l~W~~~~~~~i~~Y~v~~~~ 133 (375)
T 3t1w_A 59 SSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVP-----QLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVA 133 (375)
T ss_dssp CEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCC-----CCSCCEEECCCSSEEEEECCCCCCTTEEEEEEEEEE
T ss_pred cEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCC-----CCceEEEEecCCCeEEEEEECCCCCCceEEEEEEEE
Confidence 358899999988888999999987765433322211222 13333333 45688999986532 23345566665
Q ss_pred CCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCCCceEEEEeeCCeeEEE
Q psy12060 718 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 797 (978)
Q Consensus 718 ~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~~~~~~~~~~~v~l~ 797 (978)
.+...... ..........+.|.++.....+.|++.|.|..|....+...... +|.+|.++.+...+.+++.|+
T Consensus 134 ~~~~~~~~------~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t-~~~~p~~l~~~~~~~~si~l~ 206 (375)
T 3t1w_A 134 AGEGIPIF------EDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQT-AVPPPTDLRFTNIGPDTMRVT 206 (375)
T ss_dssp SSSCCSCE------EEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEEEC-CCCCCEEEEEESCCSSCEEEE
T ss_pred CCCCCcee------EEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeeeec-CCCCCceeEEEecccCEEEEE
Confidence 44321100 01222345688899998888888889999998865544433333 555888999988999999999
Q ss_pred eecCCCCCCCceeEEEEEeeccc-cCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCC
Q psy12060 798 WTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876 (978)
Q Consensus 798 W~~p~~~~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~ 876 (978)
|.+|. ++.+.+|.|+|+..+. ..|..... ......+++.+ |.|++.|.|+|+|.|..|.|.++..
T Consensus 207 W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~i~~-L~p~t~Y~~~V~A~~~~g~s~~~~~-- 272 (375)
T 3t1w_A 207 WAPPP--SIDLTNFLVRYSPVKNEEDVAELSI---------SPSDNAVVLTN-LLPGTEYVVSVSSVYEQHESTPLRG-- 272 (375)
T ss_dssp EECCS--SCCCCEEEEEEEEGGGTTCCEEEEE---------CTTCCEEEECS-CCTTCEEEEEEEEEETTEECCCEEE--
T ss_pred EcCCC--CCCccEEEEEEEeCCCCCCcEEEEc---------CCCcCEEEeCC-CCCCCEEEEEEEEEcCCCcCCceee--
Confidence 99974 4568999999997654 33433211 12457789999 9999999999999999999987654
Q ss_pred CCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCC-ccceeeeeeeccceeEEEEEcCCCC
Q psy12060 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEF 955 (978)
Q Consensus 877 ~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~L~ 955 (978)
.+.| ++.+|.++.+...+.+++.|+|++| .|.|.+|+|+|+..+. ..+....+. .+. ..+.|.+|.
T Consensus 273 ~~~t----~p~~P~~l~~~~~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~~~~~~~~~~--~~~--~~~~i~~L~ 339 (375)
T 3t1w_A 273 RQKT----GLDSPTGIDFSDITANSFTVHWIAP-----RATITGYRIRHHPEHFSGRPREDRVP--HSR--NSITLTNLT 339 (375)
T ss_dssp EEEC----CCCCCEEEEEESCCSSCEEEEEECC-----SSCCSEEEEEEEETTCCSSCEEEEEE--TTC--CEEEECSCC
T ss_pred EEec----CCCCCCccEeeeccCCEEEEEECCC-----CcceeeEEEEEEECCCCCcceeEEcC--CCc--cEEEECCCC
Confidence 2334 3357889999888999999999984 3789999999998775 333333222 222 347799999
Q ss_pred ceeeEEEEEEEecCCCCCCCC
Q psy12060 956 YYTEYEVKVQAINDVGPGPES 976 (978)
Q Consensus 956 p~t~Y~~~V~A~n~~G~gp~S 976 (978)
|++.|.|+|+|+|.+|.|+++
T Consensus 340 p~t~Y~~~V~A~~~~G~s~p~ 360 (375)
T 3t1w_A 340 PGTEYVVSIVALNGREESPLL 360 (375)
T ss_dssp TTCEEEEEEEEEETTEECCCE
T ss_pred CCCEEEEEEEEECCCCCCCce
Confidence 999999999999999999985
No 109
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.91 E-value=3e-24 Score=231.77 Aligned_cols=252 Identities=16% Similarity=0.297 Sum_probs=166.2
Q ss_pred CCCCCCcEEEEEEEeec--CCCeeEEEEc--CccCC-----------------CCceee------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGY--PVPSYNWTRR--GSPLP-----------------RNAYFE------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~--p~~~v~W~~~--~~~l~-----------------~~~~~~------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+. +.+.|.|+|+ +..+. ...++. ....+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (344)
T 1za6_B 11 VVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSED 90 (344)
T ss_dssp EECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCccc
Confidence 56799999999999886 3678999997 33221 011221 123589999999999
Q ss_pred CeEEEEEEEeCCCceEEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCCCCC-
Q psy12060 463 QGEYICRASNDRSALESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSETLP- 535 (978)
Q Consensus 463 ~G~Y~C~a~n~~g~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~- 535 (978)
+|.|+|.|.|..+.....+.|.|. .+|.+...+....+.+|+.++|.|.+.|. |. +.|.|+|+|..+......
T Consensus 91 ~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 170 (344)
T 1za6_B 91 TAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPA 170 (344)
T ss_dssp CEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCC
T ss_pred CEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCC
Confidence 999999999865544455678887 34555543334457899999999999986 64 799999999764211000
Q ss_pred -CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEE-----------------------EEEcCCcccc
Q psy12060 536 -LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLR-----------------------VLTLKPSFKK 591 (978)
Q Consensus 536 -~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~-----------------------v~~~~p~~~~ 591 (978)
......+. ..+.|.|..+.. +| |.|+|.|.|..+.......+. ....+|.+..
T Consensus 171 ~~~~~~~~~-~~s~L~i~~~~~-~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~ 247 (344)
T 1za6_B 171 VLQSSGLYS-LSSVVTVPSSSL-GT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYT 247 (344)
T ss_dssp EECTTSCEE-EEEEEEEETTHH-HH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCEEEE
T ss_pred eECCCCCEE-EEEEEEEcHHHc-CC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEEEE
Confidence 01122332 234788988875 67 999999999887643333221 1112444433
Q ss_pred CCCCcceeecCCCeEEEEEeeccC-C-CCeeEEeeCCEEecCCCc--EEEeecCc------EEEccccCCCCEEEEEEEE
Q psy12060 592 RPLESETYAGEGGNVTIFCNPEAA-P-KPKFVWKKDGNIIGSGGR--RKIFENGN------LLISPVSRDDSGIYSCTAT 661 (978)
Q Consensus 592 ~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~g~~~~~~~~--~~~~~~~~------l~i~~~~~~d~G~Y~C~a~ 661 (978)
.+.... ...|+.++|.|.+.|. | .+.|+|+++|..+..... .....+++ |.|.....+|.|.|+|.|.
T Consensus 248 ~~~~~~--~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~ 325 (344)
T 1za6_B 248 LPPSRD--ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVM 325 (344)
T ss_dssp ECCCGG--GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEE
T ss_pred eCCChH--hccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEE
Confidence 222111 2346679999999985 4 358999999987754321 11123333 5666666678999999999
Q ss_pred eCCce
Q psy12060 662 NVHGM 666 (978)
Q Consensus 662 n~~g~ 666 (978)
|....
T Consensus 326 ~~~l~ 330 (344)
T 1za6_B 326 HEALH 330 (344)
T ss_dssp CTTST
T ss_pred cCCCC
Confidence 97644
No 110
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.90 E-value=1.2e-24 Score=232.66 Aligned_cols=248 Identities=15% Similarity=0.212 Sum_probs=163.9
Q ss_pred CcEEEEEEEeec-C-CCeeEEEEcCccCCCCce----eeec-----ccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEE
Q psy12060 415 DKVRLECVAFGY-P-VPSYNWTRRGSPLPRNAY----FENF-----NRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483 (978)
Q Consensus 415 ~~~~l~C~~~g~-p-~~~v~W~~~~~~l~~~~~----~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 483 (978)
+.++|.|.+.|. | .++|+|+|+|..+..... .... ...|.|.++..+|+|.|+|.|.|..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 699999999985 4 469999999999865431 1111 1357777777789999999999987765544432
Q ss_pred EEE---eecee-eccCCcccccCCCceeEEEEeecC-CCC---eeEEeECC-EECCCCCCCC--CCCCcEEEecCEEEEE
Q psy12060 484 SIQ---AEPNF-TIPLTDKHMDNQADLTWTCEAFGV-PDV---TYSWFRNG-ELLNSETLPL--EDQDRYFIQDNVLTIR 552 (978)
Q Consensus 484 ~V~---~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~-p~~---~i~W~~~g-~~~~~~~~~~--~~~~~~~~~~~~l~i~ 552 (978)
.+. ..|.+ ...+....+.+|++++|.|.+.|. |.+ .|.|+|++ ..+....... ....++. ..+.|.|.
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~-~~~~L~I~ 183 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLT-VTSTLPVG 183 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEE-EEEEEECC
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEE-EEEEEEEC
Confidence 111 13333 334555568899999999999886 455 99999964 4443211000 0112222 34579999
Q ss_pred eCCCCCCCeEEEEEEEcCCCceeeEEEEEE---EEcCCccccCCCCcceeecCCCeEEEEEeecc-CCCC-eeEEeeCCE
Q psy12060 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRV---LTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGN 627 (978)
Q Consensus 553 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v---~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~ 627 (978)
++.. +|+|.|+|.|.|..+.......+.+ ...+|.+...+.... ...|+.++|.|.+.| .|++ .|+|+++|.
T Consensus 184 ~~~~-~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~--~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~ 260 (323)
T 2wqr_A 184 TRDW-IEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEW--PGSRDKRTLACLIQNFMPEDISVQWLHNEV 260 (323)
T ss_dssp HHHH-HTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCC--TTCTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred HHHc-cCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChH--HhcCCcEEEEEEeeeeeCCCcEEEEEECCE
Confidence 9986 8999999999998644322222221 113454433222211 223999999999998 4443 899999999
Q ss_pred EecCCCcE----EEee------cCcEEEccccCCCCEEEEEEEEeCCce
Q psy12060 628 IIGSGGRR----KIFE------NGNLLISPVSRDDSGIYSCTATNVHGM 666 (978)
Q Consensus 628 ~~~~~~~~----~~~~------~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 666 (978)
.+..+... .... .+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 261 ~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 261 QLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp ECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred ECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 88653211 0111 235899999999999999999998765
No 111
>3vpp_A C-type lectin domain family 9 member A; dendritic cell, C-type lectin-like domain, membrane, immune; 1.64A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=190.57 Aligned_cols=126 Identities=20% Similarity=0.297 Sum_probs=107.0
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
|..||.+|+.|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||..++........+||||.+...++.|.|
T Consensus 1 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~w~W 79 (132)
T 3vpp_A 1 SSPCPNNWIQNRESCYYVSEIW-SIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYDYWVGLSQDGHSGRWLW 79 (132)
T ss_dssp -CCSCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHTTSSSCCEEEEEEEECTTTCCEEE
T ss_pred CCCCCccceEeCCEEEEEECCc-cCHHHHHHHHHhcCCEEeEECCHHHHHHHHHHHhccCCCccEEEEecccCCCCceEe
Confidence 4689999999999999999995 999999999999999999999999999999988655455679999999988999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.||+++.+ .+|..++|+...++|+.+... .|.+..|.....|+|+..
T Consensus 80 ~dg~~~~~--~~w~~~~p~~~~~~C~~~~~~------~w~~~~C~~~~~fiCe~~ 126 (132)
T 3vpp_A 80 QDGSSPSP--GLLPAERSQSANQVCGYVKSN------SLLSSNCDTWKYFICEKY 126 (132)
T ss_dssp TTSCCCCT--TSCCCC------CEEEEEETT------EEEEEESSSCBEEEEEEE
T ss_pred cCCCcCCh--hhcccCCCCCCCCceEEEECC------eEeccCCCCCceEECCcc
Confidence 99999864 678888888778899998632 589999999999999983
No 112
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.90 E-value=4.9e-23 Score=216.69 Aligned_cols=211 Identities=18% Similarity=0.188 Sum_probs=159.6
Q ss_pred EEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcC---CCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeecc
Q psy12060 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEG---PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 819 (978)
Q Consensus 743 ~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~---~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~ 819 (978)
.+..+.....+.+++.|.|..|....+....... +|.+|.++.+.... +++.|+|.+|.. ++.+|.|+|+...
T Consensus 64 ~~~~l~p~t~Y~~~V~A~n~~G~s~~s~~~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~---~i~~Y~v~~~~~~ 139 (290)
T 3l5i_A 64 KLTVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE---SVKKYILEWCVLS 139 (290)
T ss_dssp EEEEEECSSCEEEEEEEEESSCBCCCEEEEECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS---CCCEEEEEEEEEC
T ss_pred EEEEEcCCceEEEEEEEEcCCCCCCCceEEeecccccCCCccceeEEEeCC-CeEEEEEeCCCC---CCCcEEEEEEECC
Confidence 3445555677888899999999765443322222 56667778776654 799999999865 7899999998765
Q ss_pred cc-----CceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceee
Q psy12060 820 NS-----TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894 (978)
Q Consensus 820 ~~-----~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~ 894 (978)
.. .|..... .....+++.+ |.|++.|.|+|.|.|..|.|+++.. .+.|.+.+|..+| ++.+
T Consensus 140 ~~~~~~~~~~~~~~----------~~~~~~~~~~-L~p~t~Y~~~V~A~n~~g~g~~~~~--~~~t~~~~P~~~p-~~~~ 205 (290)
T 3l5i_A 140 DKAPCITDWQQEDG----------TVHRTYLRGN-LAESKCYLITVTPVYADGPGSPESI--KAYLKQAPPSKGP-TVRT 205 (290)
T ss_dssp SSSCCCCEEEEEET----------TCSEEECCSC-CCTTCEEEEEEEEEETTEECCCEEE--EEESSCCCCSSCC-CEEE
T ss_pred CCCCCCcCeEEccC----------CCcceEEecC-cCCccEEEEEEEEEeCCcccccEEE--EeEccccCCCCCC-eeeE
Confidence 43 3444321 2345567788 9999999999999999999985333 4557888887777 7778
Q ss_pred cccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCC
Q psy12060 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974 (978)
Q Consensus 895 ~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp 974 (978)
...+.++|.|+|++|++...||.|++|+|+|+..+.. +....+ ..+. ..+.|.+|.|++.|.|+|+|+|.+| |+
T Consensus 206 ~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~-~~~~~~--~~~~--~~~~~~~L~p~t~Y~~~V~A~n~~G-g~ 279 (290)
T 3l5i_A 206 KKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN-ETAVNV--DSSH--TEYTLSSLTSDTLYMVRMAAYTDEG-GK 279 (290)
T ss_dssp EEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC-CEEEEE--ETTC--SEEEECSCCTTCEEEEEEEEEETTE-EE
T ss_pred eeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC-eEEEEe--CCCc--eEEEeCCCCCCCEEEEEEEEEeCCC-CC
Confidence 8888999999999888889999999999999987644 332222 1222 3477999999999999999999999 88
Q ss_pred CCC
Q psy12060 975 ESE 977 (978)
Q Consensus 975 ~S~ 977 (978)
+|+
T Consensus 280 ~s~ 282 (290)
T 3l5i_A 280 DGP 282 (290)
T ss_dssp ECC
T ss_pred CCC
Confidence 775
No 113
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.90 E-value=2.2e-23 Score=210.82 Aligned_cols=185 Identities=21% Similarity=0.190 Sum_probs=145.8
Q ss_pred CCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCce
Q psy12060 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855 (978)
Q Consensus 776 ~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~ 855 (978)
.||.+|.++++...+.+++.|+|++| ++.+.+|.|+|+..+...+.... .......+++.+ |.|++.
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~~~~~~---------~~~~~~~~~i~~-L~p~t~ 70 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSESEAHL---------LDSKVPSVELTN-LYPYCD 70 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSCGGGCEE---------EEESSSEEEECS-CCTTCE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCCccceEE---------EcCCccEEEECC-CCCCCE
Confidence 58999999999999999999999998 35799999999876543321110 012466789999 999999
Q ss_pred eEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCcccee
Q psy12060 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935 (978)
Q Consensus 856 Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~ 935 (978)
|.|+|+|.|..|.|++|... .++|.+.+| .+|.++.+...+.++|.|+|++ |...||.|++|+|+|+..+...+..
T Consensus 71 Y~~~V~A~n~~G~g~~s~~~-~~~T~~~~P-~~P~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~ 146 (234)
T 3f7q_A 71 YEMKVCAYGAQGEGPYSSLV-SCRTHQEVP-SEPGRLAFNVVSSTVTQLSWAE--PAETNGEITAYEVCYGLVNDDNRPI 146 (234)
T ss_dssp EEEEEEEEETTEECCCCCCE-EEECCCCCC-CCCCCCEEEECSSSCEEEECCC--CSCCSSCCCEEEEEEEEBCTTSCBS
T ss_pred EEEEEEEEeCCCcCCCCCeE-EEEcCCCCC-CCCCccEEEEecCCEEEEEEcC--CCCCCCceeEEEEEEEECCCCCCcc
Confidence 99999999999999998766 678888877 4688999999999999999998 4568899999999999876443221
Q ss_pred e--eeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 936 E--TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 936 ~--~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
. ......+.....+.|.+|.|++.|.|+|+|+|.+|.|++|+
T Consensus 147 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 190 (234)
T 3f7q_A 147 GPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPERE 190 (234)
T ss_dssp SCCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEE
T ss_pred CcceEEEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcC
Confidence 0 00011111223577999999999999999999999999975
No 114
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.90 E-value=7.9e-24 Score=226.35 Aligned_cols=257 Identities=16% Similarity=0.233 Sum_probs=162.2
Q ss_pred CceeEEEEeecC-C-CCeeEEeECCEECCCCCCC---CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEE
Q psy12060 504 ADLTWTCEAFGV-P-DVTYSWFRNGELLNSETLP---LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 578 (978)
Q Consensus 504 ~~~~l~C~~~~~-p-~~~i~W~~~g~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~ 578 (978)
++++|.|.+.+. | .+.|+|+|||..+...... ......+ .....|.|..... +|+|.|+|.|.|..+......
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~-~~~s~l~i~~~~~-~d~g~Y~C~a~n~~~~~~~~~ 102 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELA-STQSELTLSQKHW-LSDRTYTCQVTYQGHTFEDST 102 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEE-EEEEEEEEEHHHH-HTTCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcE-EEEEEEEEcHHHc-CCCCcEEEEEEeCCCCcceee
Confidence 699999999986 4 5799999999988632100 0001111 1223577777664 699999999999876543322
Q ss_pred EEEEE--EcCCccccCCCCcceeecCCCeEEEEEeeccC-CCC---eeEEeeCC-EEecCCCcEE-------EeecCcEE
Q psy12060 579 QLRVL--TLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP---KFVWKKDG-NIIGSGGRRK-------IFENGNLL 644 (978)
Q Consensus 579 ~l~v~--~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~---~i~W~~~g-~~~~~~~~~~-------~~~~~~l~ 644 (978)
.+.+. ...|.+...+ +....+.+|++++|.|.+.+. |.+ .|.|++++ ..+....... ....+.|.
T Consensus 103 ~~~~~~~~~~p~v~~~~-p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~ 181 (323)
T 2wqr_A 103 KKCADSNPRGVSAYLSR-PSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLP 181 (323)
T ss_dssp CCCCCSSGGGCEEEECC-CCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEE
T ss_pred ecCCCCCCCCCEEEEcC-CCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEE
Confidence 21000 0122222221 122236789999999999886 455 89999964 4443222111 11234699
Q ss_pred EccccCCCCEEEEEEEEeCCceeeeeEEEEE----EeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCE
Q psy12060 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIV----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 720 (978)
Q Consensus 645 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v----~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~ 720 (978)
|.++..+|+|.|+|.|.|..+.......+.+ ..+|.+....+.... ..|+.++|.|.+.+.+++.+.+.|+++|.
T Consensus 182 I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~-~~g~~~~l~C~~~g~~p~~~~v~W~k~g~ 260 (323)
T 2wqr_A 182 VGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWP-GSRDKRTLACLIQNFMPEDISVQWLHNEV 260 (323)
T ss_dssp CCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCT-TCTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHH-hcCCcEEEEEEeeeeeCCCcEEEEEECCE
Confidence 9999999999999999998754333333321 134443332222111 22999999999999766667889999999
Q ss_pred EccccccccccCCeeecC-----CceEEEeccCCCCCEEEEEEEEcCCCc
Q psy12060 721 RIGNMDLNELETPNINID-----GGLLEITNASFADAGEYECVVKSTVGK 765 (978)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~d~g~Y~c~a~n~~G~ 765 (978)
.+........ ......+ .+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 261 ~l~~~~~~~~-~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 261 QLPDARHSTT-QPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp ECCGGGEEEC-CCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred ECCCCceeec-CcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 8864211000 0000111 247899999999999999999998876
No 115
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.90 E-value=1.1e-23 Score=232.64 Aligned_cols=216 Identities=20% Similarity=0.259 Sum_probs=153.5
Q ss_pred CCCCEEEEEEEEcCCCceeee-EEEEEcCCCCCCCceEEEEeeCCeeEEEeecCCCCCC-CceeEEEEEeecc--ccCce
Q psy12060 749 FADAGEYECVVKSTVGKISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR-PITHYKIIARTNW--NSTWF 824 (978)
Q Consensus 749 ~~d~g~Y~c~a~n~~G~~s~~-~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~-~i~~Y~v~~~~~~--~~~w~ 824 (978)
..+.|.|.|.+.|..|..... .......||++|.++.. .++.+++.|+|.+|.+.|+ ++.+|.|+|+... ...|.
T Consensus 304 s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl~~-~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~ 382 (536)
T 3fl7_A 304 PSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTA-VGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECG 382 (536)
T ss_dssp CCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCEEE-ECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEE
T ss_pred CCCCCccEEEEeccccccCCCccccccccCCCcccceEE-EecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCccc
Confidence 456799999999999975543 23334679999999954 7899999999999987665 8999999998743 23444
Q ss_pred EecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCC---CCCCCCCCCCCCCCCCCCCCceeecccccCc
Q psy12060 825 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE---PSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 901 (978)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~---~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~s 901 (978)
...................+++.+ |.|++.|.|+|.|.|..|.+. .+... .++|.+.+ |..+.+...+.++
T Consensus 383 ~c~~~~~~~~~~~~~~~ts~tI~g-L~P~T~Y~frV~A~N~~G~~sps~~s~~v-~v~T~~~~----Ps~~~~~~~s~tS 456 (536)
T 3fl7_A 383 PCEASVRYSEPPHGLTRTSVTVSD-LEPHMNYTFTVEARNGVSGLVTSRSFRTA-SVSINQTE----PPKVRLEGRSTTS 456 (536)
T ss_dssp ECCTTCEESSCSSSBCSSEEEEEC-CCTTCEEEEEEEEECTTGGGCSCCCEEEE-EEECCSCC----CCEEEEEECCC-C
T ss_pred ccCCCceEEEeecCCccceeEeCC-CCCCCEEEEEEEEEecCCCCCCCCcccee-EEeecccC----CCCCceeeccCCe
Confidence 333222111111112467789999 999999999999999999843 33332 45555444 4455557788899
Q ss_pred EEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 902 i~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
|.|+|++ |...||.|++|+|+|+..+.. .....+. .....+.|.+|.|++.|.|+|+|.|.+|.||+|++
T Consensus 457 V~LsW~p--P~~~ng~I~~Y~V~y~~~~~~-~~~~~v~----~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~ 526 (536)
T 3fl7_A 457 LSVSWSI--PPPQQSRVWKYEVTYRKKGDS-NSYNVRR----TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKV 526 (536)
T ss_dssp CEEEEEC--CTTTTTTCSEEEEEEEEC--C-CCCEEEE----ESSSEEECCSCCSSCEEEEEEEEECC---CEECCC
T ss_pred EEEEEEC--CcCCCCcccEEEEEEEECCCC-ceEEEEc----CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCC
Confidence 9999998 468899999999999987654 2211121 12234779999999999999999999999999964
No 116
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.89 E-value=7.9e-21 Score=207.63 Aligned_cols=296 Identities=15% Similarity=0.121 Sum_probs=207.1
Q ss_pred cEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEE--ccccEEEEEEeeec-CCcCeEEEEeeC
Q psy12060 642 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA--AHRNLQLRCSAHTE-ELLDVAYIWTHN 718 (978)
Q Consensus 642 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~--~g~~~~l~C~~~~~-p~~~~~~~W~~~ 718 (978)
.+.+.++.......|+..|.|..|..... ...+...+. .+..+.+. ....+.|.|..... +...+.+.|...
T Consensus 59 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~-~~~~~~~~~----~p~~l~~~~~~~~si~l~W~~p~~~~~~~Y~v~~~~~ 133 (368)
T 1fnf_A 59 SCTFDNLSPGLEYNVSVYTVKDDKESVPI-SDTIIPAVP----PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPV 133 (368)
T ss_dssp EEECCCCCTTSCEEEEEEEEETTEECCCE-EEEECCCCC----CCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEET
T ss_pred EEEECCCCCCCEEEEEEEEEcCCCccCce-eeeecCCCc----CCceeEEEEcCCCeEEEEeeCCCCCCCcEEEEEEEEC
Confidence 47888999988899999999988765432 222222111 22333332 35678899987632 233455566543
Q ss_pred CEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCCCceEEEEeeCCeeEEEe
Q psy12060 719 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 798 (978)
Q Consensus 719 g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~~~~~~~~~~~v~l~W 798 (978)
+..-.. ...........+.|.++.....+.|++.|.|..|... ........+|.+|.++.+...+.+++.|+|
T Consensus 134 ~~~~~~------~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~~~~~~P~~l~~~~~~~~sv~l~W 206 (368)
T 1fnf_A 134 KNEEDV------AELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHEST-PLRGRQKTGLDSPTGIDFSDITANSFTVHW 206 (368)
T ss_dssp TCTTCC------EEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCCEEEEEESCCSSEEEEEE
T ss_pred CCCCcc------EEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCC-CeEeeecCCCCCCCccEEEEccCCEEEEEE
Confidence 221000 0011222446788888888888888888899888543 345556677889999999888999999999
Q ss_pred ecCCCCCCCceeEEEEEeecccc-CceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCC
Q psy12060 799 TDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 877 (978)
Q Consensus 799 ~~p~~~~~~i~~Y~v~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~ 877 (978)
.+|. +++.+|.|+++..... .|.... .......+++.+ |.|++.|.|+|+|.|..|.|+++.. .
T Consensus 207 ~~p~---~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~~i~~-L~p~t~Y~~~V~A~n~~g~~~~~~~--~ 271 (368)
T 1fnf_A 207 IAPR---ATITGYRIRHHPEHFSGRPREDR---------VPHSRNSITLTN-LTPGTEYVVSIVALNGREESPLLIG--Q 271 (368)
T ss_dssp ECCS---SCCSEEEEEEECSCCSSCCEEEE---------EETTCCEEEEES-CCTTCEEEEEEEEEETTEECCCEEE--E
T ss_pred eCCC---CCcCEEEEEEecCCCCCCccEEE---------eCCCcCEEEECC-CCCCCEEEEEEEEEeCCccCCcccc--c
Confidence 9874 4789999999876542 232211 112456789999 9999999999999999999887643 1
Q ss_pred CCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccc-eeeeeeeccceeEEEEEcCCCCc
Q psy12060 878 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF-QSETLKEYGNVGIAVVRIPSEFY 956 (978)
Q Consensus 878 ~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~L~p 956 (978)
...++.+|.++.+...+.++|.|+|++|. +.|.+|+|+|+..+.... ....+ ..+. ..+.+.+|.|
T Consensus 272 ----~~t~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~--~~~~~~~L~p 338 (368)
T 1fnf_A 272 ----QSTVSDVPRDLEVVAATPTSLLISWDAPA-----VTVRYYRITYGETGGNSPVQEFTV--PGSK--STATISGLKP 338 (368)
T ss_dssp ----EECCCCSCEEEEEEEEETTEEEEEEECCS-----SCCSEEEEEEEETTCCSCCEEEEE--ETTC--CEEEECSCCT
T ss_pred ----ccCCCCCCCeeEEEecCCCEEEEEeeCCC-----CccceEEEEEEECCCCCccEEEEc--CCCe--eEEEecCCCC
Confidence 22344678899998889999999999843 258999999998764332 22222 1222 3477999999
Q ss_pred eeeEEEEEEEecCCCCCCCCC
Q psy12060 957 YTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 957 ~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
++.|.|+|+|+|.+|.|++|+
T Consensus 339 ~t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 339 GVDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp TCCEEEEEEEECCCSSSCCBC
T ss_pred CCEEEEEEEEeCCCCcCcccC
Confidence 999999999999999999985
No 117
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.89 E-value=2.2e-21 Score=205.01 Aligned_cols=260 Identities=15% Similarity=0.187 Sum_probs=177.9
Q ss_pred eeecCCCeEEEEEeecc-------CCCCeeEEeeCCEEecCCCcEEEeec--CcEEEccccCCCCEEEEEEEEeCCcee-
Q psy12060 598 TYAGEGGNVTIFCNPEA-------APKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMD- 667 (978)
Q Consensus 598 ~~~~~g~~~~l~C~~~~-------~p~~~i~W~~~g~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~a~n~~g~~- 667 (978)
..+..|++++|.|.+.+ .|.+.|.|+++|..+..+ ++.+... +.|.|.++...+ |.|+|.|.+. |..
T Consensus 14 ~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~~~~~~~L~i~~~~~~~-g~Y~C~a~~~-g~~~ 90 (303)
T 1i1r_A 14 PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTIINRTASSVTFTDIASLN-IQLTCNILTF-GQLE 90 (303)
T ss_dssp CEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEEETTEEEEEECSCCCSE-EEEEEEEEET-TTEE
T ss_pred ceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeeeCCcEEEEEEcCcCCCc-eEEEEecccC-CCcc
Confidence 44789999999999986 477899999999988654 3334332 359999999884 9999999874 322
Q ss_pred --eeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCC--cCeEEEEeeCCEEccccccccccCCeeecCCceEE
Q psy12060 668 --ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL--LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 743 (978)
Q Consensus 668 --~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 743 (978)
...+.+.+..+|..+..+ .........+.|.|....... ..+.+.+...+...... .........+.
T Consensus 91 ~~~~~~~l~v~~~P~~P~~l--~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~~~-------~~~~~~~~~~~ 161 (303)
T 1i1r_A 91 QNVYGITIISGLPPEKPKNL--SCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADC-------KAKRDTPTSCT 161 (303)
T ss_dssp EEEEEEEEEEECCCCCCEEE--EEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCE-------ECCSSCTTEEE
T ss_pred eEEEEEEEeccCCCCCCeee--EEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCccC-------CCcCCCceEEE
Confidence 223455555555422211 111222356777776543321 23334443333221100 01122345788
Q ss_pred Eecc-CCCCCEEEEEEEEcCCCceee-eEEEEE--cCCCCCCCceEEEEe--eCCeeEEEeecCCCCCCCceeEEEEEee
Q psy12060 744 ITNA-SFADAGEYECVVKSTVGKIST-KTTVIV--EGPPGLPGGVQVVEV--HKTSATIQWTDGATNGRPITHYKIIART 817 (978)
Q Consensus 744 i~~~-~~~d~g~Y~c~a~n~~G~~s~-~~~l~v--~~~P~~P~~~~~~~~--~~~~v~l~W~~p~~~~~~i~~Y~v~~~~ 817 (978)
|.++ .....+.+++.|.|..|.... ...+.. ..+|.||.++.+... +.+++.|+|++|...+++|++|.|+|+.
T Consensus 162 i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~ 241 (303)
T 1i1r_A 162 VDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRT 241 (303)
T ss_dssp CSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEE
T ss_pred ECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEe
Confidence 8888 777788889999999997643 223222 247899998888654 6789999999998777899999999999
Q ss_pred ccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCC
Q psy12060 818 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 876 (978)
Q Consensus 818 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~ 876 (978)
.+...|..+..... ......++|.+ |.|++.|.|||+|.|..|.|++|+.+.
T Consensus 242 ~~~~~w~~~~~~~~------~~~~~~~~l~~-L~p~t~Y~~rV~A~n~~G~G~~S~wS~ 293 (303)
T 1i1r_A 242 KDASTWSQIPPEDT------ASTRSSFTVQD-LKPFTEYVFRIRCMKEDGKGYWSDWSE 293 (303)
T ss_dssp TTCSSCEECCGGGG------CSCCSEEEECS-CCTTCEEEEEEEEEETTSCSCCCCCCC
T ss_pred CCCCCceEEccccC------CCceeEEEeCC-CCCCCEEEEEEEeccCCCCCCcCCCCC
Confidence 88788876533110 12356789999 999999999999999999999887663
No 118
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.89 E-value=1.5e-22 Score=218.40 Aligned_cols=261 Identities=17% Similarity=0.278 Sum_probs=167.1
Q ss_pred CCcccccCCCceeEEEEeecC--CCCeeEEeEC--CEECCC-------C---CCCCCCCCcEEEec------CEEEEEeC
Q psy12060 495 LTDKHMDNQADLTWTCEAFGV--PDVTYSWFRN--GELLNS-------E---TLPLEDQDRYFIQD------NVLTIRYL 554 (978)
Q Consensus 495 ~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~--g~~~~~-------~---~~~~~~~~~~~~~~------~~l~i~~~ 554 (978)
+....+.+|++++|.|.+.+. +.+.|.|+|+ |..+.. . ........++.+.. ..|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 344578899999999999876 3689999996 332210 0 00001234555432 38999999
Q ss_pred CCCCCCeEEEEEEEcCCCceeeEEEEEEEE---cCCccccCCCCcceeecCCCeEEEEEeeccC-CC-CeeEEeeCCEEe
Q psy12060 555 NPERDPAMYQCRAKNQLKTRYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNII 629 (978)
Q Consensus 555 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~---~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~ 629 (978)
+. +|+|.|+|.+.|..+.......|.|.. .+|.+...+. ...+..|+.++|.|.+.|. |. +.|.|+++|..+
T Consensus 87 ~~-~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~ 163 (344)
T 1za6_B 87 RS-EDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTS 163 (344)
T ss_dssp CG-GGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECC--SCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCT
T ss_pred Cc-ccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccc--cccccCCCcEEEEEEEeeEECCCeEEEEecCCccC
Confidence 97 999999999999654444455677663 1233332211 1225789999999999986 54 699999998753
Q ss_pred c---------CCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEE------------------------EE
Q psy12060 630 G---------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI------------------------VL 676 (978)
Q Consensus 630 ~---------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~------------------------v~ 676 (978)
. .+.++. ..+.|.|..+..+| |.|+|.|.|..+.......+. +.
T Consensus 164 ~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~ 240 (344)
T 1za6_B 164 GVHTFPAVLQSSGLYS--LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQP 240 (344)
T ss_dssp TEEECCCEECTTSCEE--EEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CC
T ss_pred ceeECCCeECCCCCEE--EEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCC
Confidence 2 112221 12368899988888 999999999988654333221 11
Q ss_pred eCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCC-----ceEEEeccCCCC
Q psy12060 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-----GLLEITNASFAD 751 (978)
Q Consensus 677 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~-----~~l~i~~~~~~d 751 (978)
.+|.+....+... ...|..++|.|.+.+.+++.+.+.|+++|..+..... .......++ ..|.|.....+|
T Consensus 241 ~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~---~~~~~~~~g~~~~~s~l~i~~~~~~~ 316 (344)
T 1za6_B 241 REPQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKT---TPPVLDSDGSFFLYSKLTVDKSRWQQ 316 (344)
T ss_dssp BCCEEEEECCCGG-GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEE---CCCEECTTSCEEEEEEEEECHHHHHT
T ss_pred cCCEEEEeCCChH-hccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEe---cceEECCCCcEEEEEEEEEChHHccC
Confidence 2343332222222 2246679999999997767788899999988754210 001111122 245555555677
Q ss_pred CEEEEEEEEcCCCc
Q psy12060 752 AGEYECVVKSTVGK 765 (978)
Q Consensus 752 ~g~Y~c~a~n~~G~ 765 (978)
.|.|+|.|.|....
T Consensus 317 ~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 317 GNVFSCSVMHEALH 330 (344)
T ss_dssp TCEEEEEEECTTST
T ss_pred CCeEEEEEEcCCCC
Confidence 99999999997654
No 119
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.89 E-value=9.8e-22 Score=193.58 Aligned_cols=185 Identities=19% Similarity=0.341 Sum_probs=152.0
Q ss_pred EEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEe-cC---EEEEEeCCCCCCC
Q psy12060 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DN---VLTIRYLNPERDP 560 (978)
Q Consensus 485 V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~-~~---~l~i~~~~~~~d~ 560 (978)
|..+|.+...+....+.+|++++|.|.+.+.|.+.+.|+|++..+.. ..++.+. .+ .|.|.++.. +|+
T Consensus 4 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~-------~~~~~~~~~~~~~~L~i~~~~~-~d~ 75 (197)
T 3lcy_A 4 SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQ-------SRKYKMSSDGRTHTLTVMTEEQ-EDE 75 (197)
T ss_dssp CCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECC-------CSSEEEEESSSEEEEEEECCSG-GGC
T ss_pred cCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCC-------CccEEEEeCCCEEEEEEecCCc-cCC
Confidence 34578888888888899999999999999999999999999998863 2333332 22 799999996 999
Q ss_pred eEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeec
Q psy12060 561 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN 640 (978)
Q Consensus 561 G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~ 640 (978)
|.|+|.+.|..+.......+.|...+......+......+..|+.+.|.|.+.+.|.|.+.|++++..+....+..+...
T Consensus 76 G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~ 155 (197)
T 3lcy_A 76 GVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENT 155 (197)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEC
T ss_pred EEEEEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEc
Confidence 99999999999988888888887533322222334555678999999999999999999999999999988877776655
Q ss_pred ---CcEEEccccC-CCCEEEEEEEEeCCceeeeeEEEEEEe
Q psy12060 641 ---GNLLISPVSR-DDSGIYSCTATNVHGMDESKGRLIVLH 677 (978)
Q Consensus 641 ---~~l~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 677 (978)
+.|.|.++.. +|+|.|+|.|.|..|.....+.|.|..
T Consensus 156 ~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 156 EHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred CCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 4699999985 899999999999999999888888864
No 120
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.88 E-value=1.9e-21 Score=203.70 Aligned_cols=253 Identities=12% Similarity=0.091 Sum_probs=182.0
Q ss_pred EccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEE
Q psy12060 692 AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771 (978)
Q Consensus 692 ~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~ 771 (978)
.....+.|.|.....+...+.+.|......- . ............+.|.++.....+.+++.|.|..|.. ....
T Consensus 26 ~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~---~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s-~~~~ 98 (283)
T 1tdq_A 26 VSDTVAFVEWTPPRAKVDFILLKYGLVGGEG---G---KTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNES-DASS 98 (283)
T ss_dssp ECSSCEEEEEECCSSCCSEEEEEEEESSSSC---C---CEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEEC-CCEE
T ss_pred cCCCeEEEEEECCCCceeEEEEEEEEecCCC---C---cEEEEeCCCCCEEEecCCCCCCEEEEEEEEECCCCCC-CCee
Confidence 3456788999876533344556663221100 0 0001122345678888888888888888889988764 3456
Q ss_pred EEEcCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccC
Q psy12060 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 851 (978)
Q Consensus 772 l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 851 (978)
+.+..+|.+|.++++...+.+++.|+|.+|. +.+.+|.|+|+..+...|........ ......+++.+ |.
T Consensus 99 ~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~-L~ 168 (283)
T 1tdq_A 99 TQFTTEIDAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHEVLVPKG------IGPTTKTTLTD-LV 168 (283)
T ss_dssp EEEECCCCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTCCCCEEEEEECC------SSSEEEEEECS-CC
T ss_pred EEEECCCCCCCceEEEecCCCeEEEEecCCC---CCccEEEEEEEeCCCCcceEEECCCC------CcccceEEEec-CC
Confidence 6677789999999999999999999999986 46899999999876655532211100 00157789999 99
Q ss_pred CCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCc
Q psy12060 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 931 (978)
Q Consensus 852 p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~ 931 (978)
|++.|.|+|.|.|..|.|.+... .+.+. | .+|.++.+...+.++|.|+|++| +|.|.+|+|+|+..+..
T Consensus 169 p~t~Y~~~V~A~n~~g~s~~~~~--~~~t~---~-~~P~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~~~ 237 (283)
T 1tdq_A 169 PGTEYGVGISAVMNSKQSIPATM--NARTE---L-DSPRDLMVTASSETSISLIWTKA-----SGPIDHYRITFTPSSGI 237 (283)
T ss_dssp TTCEEEEEEEEEETTEECCCEEE--EEECC---C-CCCEEEEEEEECSSCEEEEEECC-----CSCCSEEEEEEECSSSC
T ss_pred CCCEEEEEEEEEeCCCCCcceEE--EecCC---C-CCCCccEEeEecCCEEEEEEeCC-----CCcccEEEEEEEcCCCC
Confidence 99999999999999998876543 22222 2 36789999988999999999983 47899999999987643
Q ss_pred cceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 932 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
+....+. .+. ..+.|.+|.|++.|.|+|+|.|..|.|+++.
T Consensus 238 -~~~~~~~--~~~--~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~ 278 (283)
T 1tdq_A 238 -SSEVTVP--RDR--TSYTLTDLEPGAEYIISITAERGRQQSLEST 278 (283)
T ss_dssp -CEEEEEE--SSC--SEEEECCCCTTCCEEEEEEEEETTEECCCEE
T ss_pred -eeEEEeC--CCc--cEEEECCCCCCCEEEEEEEEEcCCCCCccee
Confidence 2222221 222 3477999999999999999999999999874
No 121
>2py2_A Antifreeze protein type II; type II antifreeze protein; 1.70A {Clupea harengus}
Probab=99.88 E-value=1.6e-22 Score=183.33 Aligned_cols=126 Identities=17% Similarity=0.302 Sum_probs=109.0
Q ss_pred ccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEc
Q psy12060 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (978)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~ 106 (978)
..||++|..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++.... ..+||||.+...++.|.|.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~--~~~WIGl~~~~~~~~w~W~ 78 (136)
T 2py2_A 2 DECPTDWKMFNGRCFLFNPLQ-LHWADAQESCMKEGANLASIHSLEESTFVKELTSADL--IPSWIGGTDCQVSTRWFWM 78 (136)
T ss_dssp --CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCCSHHHHHHHHTTSTTTT--CCEEEEEECCSSTTCCEET
T ss_pred CCCCcCceecCCEEEEEECCC-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHHHcCC--CCEeEeeEcCCCCCceEeC
Confidence 369999999999999999995 9999999999999999999999999999998885432 6799999998889999999
Q ss_pred CCCCCCcccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 107 DGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 107 dg~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
||+++.+ ..|.+++|++ ..++|+.+..... ..|.+..|.....|+|+..
T Consensus 79 dG~~~~y--~~W~~geP~~~~~~~Cv~~~~~~~---~~W~d~~C~~~~~fIC~~~ 128 (136)
T 2py2_A 79 DSTSMDY--ADWCAAQPDTTLTECCIQMNVGIG---KCWNDTPCTHLHSSICAKP 128 (136)
T ss_dssp TCCCCCC--CCBCTTCCCCCGGGCEEEEEETTT---TEEEEECTTSCEEEEEEEE
T ss_pred CCCCccc--CCCCCCCCCCCCCCCCeEEccCCC---CeEcCCCCCCCccEEeeEC
Confidence 9999854 5688888876 4589999976532 2789999999999999984
No 122
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.88 E-value=1.5e-21 Score=190.60 Aligned_cols=166 Identities=27% Similarity=0.408 Sum_probs=140.3
Q ss_pred CCC-CCcEEEEEEEeecCC--CeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEe
Q psy12060 411 PKA-GDKVRLECVAFGYPV--PSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487 (978)
Q Consensus 411 v~~-G~~~~l~C~~~g~p~--~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 487 (978)
+.+ |++++|.|.+.+.|. +.+.|+|++..+....... .+..|.|.+++.+|+|.|+|.|.|. +.....+.|.|..
T Consensus 14 v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~~ 91 (190)
T 2wv3_A 14 IRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVKA 91 (190)
T ss_dssp CCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEEC
T ss_pred EccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-ccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEec
Confidence 345 999999999999887 7899999999987654433 5678999999999999999999999 8888999999999
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeE--CCEECCCCCCCCCCCCcEEEec----CEEEEEeCC-CCCCC
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR--NGELLNSETLPLEDQDRYFIQD----NVLTIRYLN-PERDP 560 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~--~g~~~~~~~~~~~~~~~~~~~~----~~l~i~~~~-~~~d~ 560 (978)
+|.+...+....+.+|+.++|.|.+.|.|.+.+.|++ +|..+.... ...++.+.. ..|.|.++. . +|+
T Consensus 92 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~-~d~ 166 (190)
T 2wv3_A 92 APDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISN----SSGRFFIINKENYTELNIVNLQIT-EDP 166 (190)
T ss_dssp CCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCC----TTSCEEEEECSSEEEEEECSCCTT-TSC
T ss_pred CCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeec----CCCeEEEecCCCeeEEEEEecccc-CCC
Confidence 9999887777889999999999999999999999999 787764221 233443332 279999998 6 899
Q ss_pred eEEEEEEEcCCCceeeEEEEEEE
Q psy12060 561 AMYQCRAKNQLKTRYSSAQLRVL 583 (978)
Q Consensus 561 G~Y~C~a~n~~g~~~~~~~l~v~ 583 (978)
|.|+|.|.|..|....+..|.|.
T Consensus 167 G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 167 GEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEEEEEecCCcceeEEEEEEE
Confidence 99999999999998888887775
No 123
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.88 E-value=2.1e-21 Score=204.04 Aligned_cols=253 Identities=17% Similarity=0.114 Sum_probs=183.3
Q ss_pred EEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeee-
Q psy12060 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK- 769 (978)
Q Consensus 691 ~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~- 769 (978)
......+.|.|.....+...+.+.|...+..-.. ...........+.|.++.....+.|+..|.|..|....+
T Consensus 31 ~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~------~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~ 104 (290)
T 3r8q_A 31 QVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPM------KEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQ 104 (290)
T ss_dssp EECSSCEEEEEECCSSCCCEEEEEEEESSSSSCC------EEEEECTTCCEEEECSCCSSCEEEEEEEEEETTEECCCEE
T ss_pred ECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCce------EEEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcc
Confidence 3456789999988644444566677654321100 001222345688899998888888888999988865443
Q ss_pred EEEEEcCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeec
Q psy12060 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 849 (978)
Q Consensus 770 ~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (978)
..+.....|.+|.++++...+.+++.|+|.+| ++.+.+|.|+|+..+...+.... .......+++.+
T Consensus 105 ~~~~t~~~~~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~---------~~~~~~~~~i~~- 171 (290)
T 3r8q_A 105 GVVTTLENVSPPRRARVTDATETTITISWRTK---TETITGFQVDAVPANGQTPIQRT---------IKPDVRSYTITG- 171 (290)
T ss_dssp EEEECCCCCCCCEEEEEEEECSSCEEEEEECC---SCCCCEEEEEEEESSSCCCEEEE---------ECTTCSEEEECS-
T ss_pred eeEecCCCCCCCceeEEEEcCCCeEEEEEeCC---CCcccEEEEEEEECCCCcceEEe---------cCCCccEEEECC-
Confidence 23333344678899999999999999999997 34789999999876654433211 113456789999
Q ss_pred cCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecC
Q psy12060 850 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 929 (978)
Q Consensus 850 L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~ 929 (978)
|.|++.|.|+|.|.|..|.|.+... .+.|. +.+|.++.+...+.++|.|+|++|+ |.+.+|+|+|+..+
T Consensus 172 L~p~t~Y~~~V~A~n~~g~s~~~~~--~~~t~----p~~P~~l~~~~~~~~sv~l~W~~p~-----~~~~~Y~v~~~~~~ 240 (290)
T 3r8q_A 172 LQPGTDYKIYLYTLNDNARSSPVVI--DASTA----IDAPSNLRFLATTPNSLLVSWQPPR-----ARITGYIIKYEKPG 240 (290)
T ss_dssp CCTTCEEEEEEEEEETTEECCCEEE--EEECC----CCCCEEEEEEEEETTEEEEEEECCS-----SCCCEEEEEEECTT
T ss_pred CCCCCEEEEEEEEEeCCcccCCEEE--EecCC----CCCCCccEEEeeCCCEEEEEEeCCC-----CcccEEEEEEEeCC
Confidence 9999999999999999999886543 23333 3578899998899999999999843 58999999999877
Q ss_pred CccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCC
Q psy12060 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976 (978)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S 976 (978)
...|..... ...+ ...+.|.+|.|++.|.|+|+|+|.+|.|++.
T Consensus 241 ~~~~~~~~~-~~~~--~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 284 (290)
T 3r8q_A 241 SPPREVVPR-PRPG--VTEATITGLEPGTEYTIYVIALKNNQKSEPL 284 (290)
T ss_dssp SCCEECSSC-CCTT--CCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred CCcceeEec-cCCC--ccEEEECCCCCCCEEEEEEEEEeCCCcCCcc
Confidence 655532211 1112 2347799999999999999999999999874
No 124
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.88 E-value=2.8e-22 Score=200.05 Aligned_cols=188 Identities=14% Similarity=0.185 Sum_probs=143.4
Q ss_pred EcCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeecc-CC
Q psy12060 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL-VP 852 (978)
Q Consensus 774 v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L-~p 852 (978)
+..||++|.++++.....+++.|+|++|.+.++ .++|.|+|+..+...+.... .......+++.+ | .+
T Consensus 4 ~g~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~-~~~Y~v~~~~~~~~~~~~~~---------~~~~~~~~~i~~-L~~~ 72 (215)
T 1bqu_A 4 SGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKA---------KRDTPTSCTVDY-STVY 72 (215)
T ss_dssp -CCCCCCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEEC---------CSSCTTEEECSS-CCCT
T ss_pred cCCCCCCCEeeEeEECCCCcEEEEcCCCCCCCC-CceEEEEEEEcCCCcccccc---------ccCCcceEEEcC-Cccc
Confidence 457899999999988888999999999987765 47999999875433221111 112356788999 9 99
Q ss_pred CceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeeccc--ccCcEEEEEEeCCCCCCCCCcceEEEEEEecCC
Q psy12060 853 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG--KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 930 (978)
Q Consensus 853 ~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~--~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~ 930 (978)
++.|.|+|.|.|..|.+.. ... .+.+....++.+|.++.+... +.++|.|+|++ |...||.|++|.|+|+..+.
T Consensus 73 ~t~Y~~~V~A~n~~G~~~s-~~~-~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~y~~~~~ 148 (215)
T 1bqu_A 73 FVNIEVWVEAENALGKVTS-DHI-NFDPVYKVKPNPPHNLSVINSEELSSILKLTWTN--PSIKSVIILKYNIQYRTKDA 148 (215)
T ss_dssp TSCEEEEEEEEETTEEEEC-CCE-EECGGGSEECCCCEEEEEECC--CCSCEEEEEEC--CGGGGTSCEEEEEEEEETTC
T ss_pred cccEEEEEEEEecccCccC-CcE-EecccccCcCCCCCceEEEEecCCCceEEEEEeC--CCCCCcceEEEEEEEccCCC
Confidence 9999999999999999873 322 344445556689999998765 77899999998 44567899999999999887
Q ss_pred ccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 931 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
..|........ ......+.|.+|.|++.|.|+|+|.|.+|.|++|+
T Consensus 149 ~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~ 194 (215)
T 1bqu_A 149 STWSQIPPEDT-ASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD 194 (215)
T ss_dssp SSCEECCGGGG-CSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCC
T ss_pred CCceEeccccc-cCccceEEeCCCCCCCEEEEEEEEccCCCCCccCC
Confidence 77765432110 11223477999999999999999999999998775
No 125
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.88 E-value=1.8e-21 Score=191.03 Aligned_cols=166 Identities=25% Similarity=0.434 Sum_probs=139.3
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCc----e--eeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA----Y--FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~----~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 482 (978)
..+.+|++++|.|.+.|.|.+.++|+|++..+.... . .......|.|.+++.+|+|.|+|.+.|..|.....+.
T Consensus 15 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~ 94 (194)
T 2a38_A 15 VVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAE 94 (194)
T ss_dssp EEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEE
Confidence 356799999999999999999999999999886543 1 1233468999999999999999999999998888888
Q ss_pred EEEE---eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEe--cC--EEEEEeCC
Q psy12060 483 ISIQ---AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ--DN--VLTIRYLN 555 (978)
Q Consensus 483 l~V~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~--~~--~l~i~~~~ 555 (978)
|.|. .+|.+...+....+.+|+.++|.|.+.+.|.+.+.|+++|..+.. ..++.+. .. .|.|.++.
T Consensus 95 l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~-------~~~~~~~~~~~~~~L~i~~~~ 167 (194)
T 2a38_A 95 LLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQS-------SLDFQISQEGDLYSLLIAEAY 167 (194)
T ss_dssp EEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCC-------SSSEEEEEETTEEEEEEEEEC
T ss_pred EEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCC-------CCcEEEEEcCCEEEEEECCCC
Confidence 9888 677777777777899999999999999999999999999998873 2233222 22 79999998
Q ss_pred CCCCCeEEEEEEEcCCCceeeEEEEEE
Q psy12060 556 PERDPAMYQCRAKNQLKTRYSSAQLRV 582 (978)
Q Consensus 556 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v 582 (978)
. +|+|.|+|.|.|..|....++.|.|
T Consensus 168 ~-~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 168 P-EDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp G-GGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred h-hcCeEEEEEEEeCCCceEEEEEEEE
Confidence 6 9999999999999998877777765
No 126
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.88 E-value=1.1e-21 Score=192.49 Aligned_cols=183 Identities=30% Similarity=0.424 Sum_probs=149.7
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecC--EEEEEeCCCCCCCeEEE
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIRYLNPERDPAMYQ 564 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~~d~G~Y~ 564 (978)
.+|.+...+....+.+|++++|.|.+.+.|.+.+.|+|+|..+..... ...+.....+ .|.|.++.. +|+|.|+
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~---~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~ 79 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTL---PGVQISFSDGRAKLTIPAVTK-ANSGRYS 79 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTS---TTCEEEEETTEEEEEESSCCG-GGCEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccC---CceEEEeCCCEEEEEECCCCc-ccCEEEE
Confidence 467788888888899999999999999999999999999988764321 1222333333 799999986 8999999
Q ss_pred EEEEcCCCceeeEEEEEEEE--cCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecC-
Q psy12060 565 CRAKNQLKTRYSSAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG- 641 (978)
Q Consensus 565 C~a~n~~g~~~~~~~l~v~~--~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~- 641 (978)
|.+.|..+.......+.|.. .+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|+++|..+....+..+..++
T Consensus 80 C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 157 (194)
T 2a38_A 80 LKATNGSGQATSTAELLVKAETAPPNFVQRL--QSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGD 157 (194)
T ss_dssp EEEEETTEEEEEEEEEEEECCCEEEEEEECC--CCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETT
T ss_pred EEEEcCCceEeEEEEEEEccCCCCCEEEeCC--ccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCC
Confidence 99999988877777777763 244444433 3455889999999999999999999999999999887777776655
Q ss_pred --cEEEccccCCCCEEEEEEEEeCCceeeeeEEEEE
Q psy12060 642 --NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675 (978)
Q Consensus 642 --~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 675 (978)
+|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 158 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 158 LYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 5999999999999999999999999888888876
No 127
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.88 E-value=1.8e-22 Score=197.06 Aligned_cols=164 Identities=15% Similarity=0.197 Sum_probs=124.2
Q ss_pred CCCCCCCcEEEEEE---EeecCCCeeEEEEcCccCCCCc---------------------eeeecccEEEeCCCCCCCCe
Q psy12060 409 EAPKAGDKVRLECV---AFGYPVPSYNWTRRGSPLPRNA---------------------YFENFNRILTIPNVKVEDQG 464 (978)
Q Consensus 409 ~~v~~G~~~~l~C~---~~g~p~~~v~W~~~~~~l~~~~---------------------~~~~~~~~L~i~~~~~~d~G 464 (978)
.++..|++++|.|. +.+.|.+.|+|+|++..+.... ........|.|.+++.+|+|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 82 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDG 82 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCe
Confidence 35678999999995 5678999999999886542110 01122457999999999999
Q ss_pred EEEEEEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE
Q psy12060 465 EYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI 544 (978)
Q Consensus 465 ~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~ 544 (978)
.|+|.|.|..|..+..+.|.|..+|.+...+....+.+|++++|.|.+.|.|.|.|+|++++..+..... ...++.+
T Consensus 83 ~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~---~~~r~~~ 159 (203)
T 4fa8_A 83 NYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTA---ANGGVMK 159 (203)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC---------------CCEE
T ss_pred EEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCccc---ccceEEE
Confidence 9999999999999999999999999988888888899999999999999999999999987655432110 2233333
Q ss_pred -ecCEE---EEEeCCCCCCCeEEEEEEEcCCCceee
Q psy12060 545 -QDNVL---TIRYLNPERDPAMYQCRAKNQLKTRYS 576 (978)
Q Consensus 545 -~~~~l---~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 576 (978)
.++.| .|.++.. +|+|.|+|.|.|..|....
T Consensus 160 ~~~g~l~il~i~~v~~-~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 160 EKDGSLSVAVDLSLPK-PWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CTTSCEEEEEEEEECS-SCCCCEEEEEESSSCEEEE
T ss_pred eCCCCEEEEEECCCCH-HHCEEEEEEEEcCCCEEEE
Confidence 33444 4457776 8999999999999997654
No 128
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.88 E-value=4.4e-22 Score=195.06 Aligned_cols=186 Identities=20% Similarity=0.341 Sum_probs=144.7
Q ss_pred CCCCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEe--ecceEEEeCC
Q psy12060 186 IPRGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTL--SGGNLIINDP 263 (978)
Q Consensus 186 ~~~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~ 263 (978)
++.+|.|...|.+..+. +|++++|.|.+.|.|.+.+.|+|++..+.. ...++.. .+.+|.|.++
T Consensus 4 ~~~~P~i~~~~~~~~~~-----~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~---------~~~~~~~~~~~~~L~i~~~ 69 (192)
T 2iep_A 4 LPKAPVITTPLETVDAL-----VEEVATFMCAVESYPQPEISWTRNKILIKL---------FDTRYSIRENGQLLTILSV 69 (192)
T ss_dssp CCEEEEESSCCCEEEEE-----TTSCEEEECCEEEESCCEEEEEETTEECCT---------TCTTEEEEGGGTEEEESSC
T ss_pred cCCCceeecCccceeee-----CCCcEEEEeeCCCCCCCeEEEEECCEEccc---------cCccEEEcCCccEEEEcCC
Confidence 34567787777766554 456799999999999999999999865421 1233333 3446899987
Q ss_pred CCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccc
Q psy12060 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (978)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 343 (978)
+.+|+|.|+|.+.|..|...+..+.|.|..+|.+........+..|+.++|.|.+ .+.|.+.+.|+|++..+ ....
T Consensus 70 -~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~--~~~~ 145 (192)
T 2iep_A 70 -EDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTT-MGNPKPSVSWIKGDSAL--RENS 145 (192)
T ss_dssp -CGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEE-EEESCCEEEEEETTEEC--CCCS
T ss_pred -CcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEE-eccCCceEEEEeCCEEc--cCCC
Confidence 8999999999999998876666778888887776666666778889999999998 67788899999998774 3445
Q ss_pred eEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccC
Q psy12060 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 391 (978)
Q Consensus 344 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~ 391 (978)
++.+..+++|.|.+++.+|+|.|+|.|.|..|.. .+..+.|.|..+
T Consensus 146 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~--~s~~~~l~V~~p 191 (192)
T 2iep_A 146 RIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTA--YSKLVKLEVEVF 191 (192)
T ss_dssp SEEECTTSCEEESSCCGGGCEEEEEEEEETTEEE--ECCCEEEEEEC-
T ss_pred cEEEecCCcEEEecCChhhCEEEEEEEEcCCCcE--EEEEEEEEEEeC
Confidence 6677778899999999999999999999987643 233477777654
No 129
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B
Probab=99.87 E-value=1.8e-22 Score=186.19 Aligned_cols=119 Identities=24% Similarity=0.400 Sum_probs=104.0
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
.||++|..|+++||+++... ++|.+|+..|+. .||+|++|++++|++||.+++........+|||+.+...++.|.|
T Consensus 24 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 102 (146)
T 3bx4_B 24 DCPSGWSSYEGHCYKPFNEP-KNWADAERFCKLQPKHSHLVSFQSAEEADFVVKLTRPRLKANLVWMGLSNIWHGCNWQW 102 (146)
T ss_dssp -CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHSSSCCEECCCSSHHHHHHHHHHHTTTTTTSEEECSCCCTTSSSCEEE
T ss_pred CCCcCcEeeCCEEEEEECCC-cCHHHHHHHHhccCCCceEeccCCHHHHHHHHHHHhhcCCCCCEEEecccCCCCCceEe
Confidence 79999999999999999995 999999999999 599999999999999999998654335679999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|. ++| +|+.+....+ .|.+..|.....|+|+.
T Consensus 103 ~dg~~~~~--~~W~-g~P-----~C~~~~~~~g----~w~~~~C~~~~~~ICe~ 144 (146)
T 3bx4_B 103 SDGARLNY--KDWQ-EQS-----ECLAFRGVHT----EWLNMDCSSTCSFVCKF 144 (146)
T ss_dssp TTCCCCCS--CCBC-SCC-----EEEEEETTCC----CEEEEETTSCEEEEEEE
T ss_pred CCCCcccc--cCcC-CCC-----CceEEECCCC----eEecCCCCCCcceEEee
Confidence 99999864 4577 766 8999876543 68999999999999997
No 130
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.87 E-value=5.1e-21 Score=190.64 Aligned_cols=185 Identities=25% Similarity=0.430 Sum_probs=147.5
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEe---c--CEEEEEeCCCCCCCe
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---D--NVLTIRYLNPERDPA 561 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~---~--~~l~i~~~~~~~d~G 561 (978)
.+|.|...+....+.+|++++|.|.+.|.|.+.|.|+++|..+.. ...++.+. + ..|.|.++...+|+|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~------~~~~~~~~~~~~~~~~L~i~~v~~~~d~G 78 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSG------TQSRYTVLEQPGGISILRIEPVRAGRDDA 78 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCT------TSTTEEEEEETTTEEEEEESSCCTTTTCS
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCC------CcceeEEEEcCCCeEEEEEEecCCCCcCc
Confidence 478888888888899999999999999999999999999998862 22333321 2 378898887327999
Q ss_pred EEEEEEEcCCCc-eeeEEEEEEEEcC------CccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCc
Q psy12060 562 MYQCRAKNQLKT-RYSSAQLRVLTLK------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR 634 (978)
Q Consensus 562 ~Y~C~a~n~~g~-~~~~~~l~v~~~~------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~ 634 (978)
.|+|.+.|..|. ......|.|...+ |.+...+ ....+..|+.++|.|.+.+.|.+.+.|++++..+.....
T Consensus 79 ~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~ 156 (212)
T 2yd1_A 79 PYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGP--GTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNP 156 (212)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECC--CCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTST
T ss_pred eEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCC--CceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCC
Confidence 999999999988 6677788887432 3343333 334578899999999999999999999999999876544
Q ss_pred EEEeecCcEEEccccCCCCEEEEEEEEeCCceeeee-EEEEEEeCC
Q psy12060 635 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGP 679 (978)
Q Consensus 635 ~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~p 679 (978)
.....++.|.|.++..+|+|.|+|.|.|..|...+. +.|.|...+
T Consensus 157 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 157 RYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp TEEEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred eEEccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 345567799999999999999999999999999775 788887644
No 131
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.87 E-value=2.8e-21 Score=192.50 Aligned_cols=169 Identities=25% Similarity=0.446 Sum_probs=142.5
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCC-Cceee-----ecccEEEeCCCCC-CCCeEEEEEEEeCCCc-eEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR-NAYFE-----NFNRILTIPNVKV-EDQGEYICRASNDRSA-LESS 480 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~-~~~~~-----~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~-~~~~ 480 (978)
..+.+|++++|.|.+.|.|.+.|+|++++..+.. ..++. ....+|.|.+++. +|+|.|+|.|.|..|. .+..
T Consensus 16 ~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~ 95 (212)
T 2yd1_A 16 QGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSAD 95 (212)
T ss_dssp EEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEE
T ss_pred eEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEee
Confidence 3567999999999999999999999999999862 22221 1125899999999 9999999999999988 7888
Q ss_pred EEEEEEee-------ceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEe
Q psy12060 481 VTISIQAE-------PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY 553 (978)
Q Consensus 481 ~~l~V~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~ 553 (978)
+.|.|..+ |.+...+....+.+|+.++|.|.+.|.|.+.|.|++++..+.. ...++...++.|.|.+
T Consensus 96 ~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~------~~~~~~~~~~~L~i~~ 169 (212)
T 2yd1_A 96 ATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDM------SNPRYSLKDGFLQIEN 169 (212)
T ss_dssp EEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCT------TSTTEEEETTEEEECS
T ss_pred EEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEccc------CCCeEEccCCeEEEcc
Confidence 99999876 6777777777788999999999999999999999999998864 2345667788999999
Q ss_pred CCCCCCCeEEEEEEEcCCCceeeE-EEEEEEE
Q psy12060 554 LNPERDPAMYQCRAKNQLKTRYSS-AQLRVLT 584 (978)
Q Consensus 554 ~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~ 584 (978)
+.. +|+|.|+|.|.|..|..... +.|.|..
T Consensus 170 v~~-~d~G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 170 SRE-EDQGKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp CCG-GGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCh-hhCEEEEEEeecCCCceeEEEEEEEEEe
Confidence 996 99999999999999988664 6777764
No 132
>1gz2_A Ovocleidin-17, OC-17 ovocleidin; structural protein, CTLD, eggshell structural protein, phosphoprotein, sugar-binding protein, glycoprotein; HET: SEP; 1.5A {Gallus gallus} SCOP: d.169.1.1
Probab=99.87 E-value=3.7e-22 Score=183.69 Aligned_cols=129 Identities=20% Similarity=0.233 Sum_probs=111.9
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCC--------CCceEEEEe
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP--------QRRKWYFGG 95 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~--------~~~~w~g~~ 95 (978)
+..||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++..... ...+||||.
T Consensus 2 ~~~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~~~~~~WIGl~ 80 (142)
T 1gz2_A 2 PDGCGPGWVPTPGGCLGFFSRE-LSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNASRGGDGSGEGADGRVWIGLH 80 (142)
T ss_dssp --CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCTTEEECCCCSHHHHHHHHHHHHCSSCCSSSCCCCSSCEEEEEE
T ss_pred CCCCCcccEEcCCEEEEEcCCC-cCHHHHHHHHhccCCCceECccCCHHHHHHHHHHHHhcccccccccccCCCEEEEee
Confidence 4579999999999999999995 999999999999 99999999999999999999865543 567999999
Q ss_pred ecCCCccEEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 96 TQQSPNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 96 ~~~~~~~w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
+...++.|.|.||+++.+ ..|.+++|++..++|+.+....+ ...|.+..|.....|+|+.
T Consensus 81 ~~~~~~~w~W~dg~~~~~--~~W~~~~P~~~~~~C~~~~~~~~--~~~w~~~~C~~~~~fICe~ 140 (142)
T 1gz2_A 81 RPAGSRSWRWSDGTAPRF--ASWHRTAKARRGGRCAALRDEEA--FTSWAARPCTERNAFVCKA 140 (142)
T ss_dssp CCTTCSSCEETTSCCCCC--CCBCSSSGGGCSCSEEEECTTTT--SSCEEEECTTCCEEEEEEE
T ss_pred cCCCCCCcEeCCCCccCc--cCcCCCCCCCCCCCCeEEecCCC--CCeEecCCCCCCceeEEee
Confidence 988899999999999854 55888888776789999876543 2368999999999999997
No 133
>1ypq_A Oxidised low density lipoprotein (lectin-like) receptor 1; oxidized low density lipoprotein receptor, LOX-1, CTLD, C- type lectin like domain; 1.40A {Homo sapiens} SCOP: d.169.1.1 PDB: 1ypu_A 1yxk_A 3vlg_A 1ypo_A 1yxj_A
Probab=99.87 E-value=3.9e-22 Score=181.14 Aligned_cols=127 Identities=18% Similarity=0.319 Sum_probs=109.7
Q ss_pred cccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccE
Q psy12060 24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW 103 (978)
Q Consensus 24 ~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w 103 (978)
..+..||.+|..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++.. ....+||||.+...++.|
T Consensus 4 ~~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~--~~~~~WIGl~~~~~~~~w 80 (135)
T 1ypq_A 4 NCSAPCPQDWIWHGENCYLFSSGS-FNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISY--SSFPFWMGLSRRNPSYPW 80 (135)
T ss_dssp -CCCSSCTTSEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHTT--CCCCEEEEEEESSTTSCC
T ss_pred ccCCcCCcccEEcCCEEEEEECCc-cCHHHHHHHHHhCCCEEeEeCCHHHHHHHHHHHhc--cCCCEEEeccccCCCCCe
Confidence 345689999999999999999994 99999999999999999999999999999998853 245789999999889999
Q ss_pred EEcCCCCCCcccccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 104 VNEDGTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 104 ~w~dg~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.|.||+++..+ ..|.+++|++ ..++|+.+... .|.+..|.....|+|+..
T Consensus 81 ~W~dg~~~~~~-~~w~~g~P~~~~~~~~Cv~~~~~------~w~~~~C~~~~~fICe~~ 132 (135)
T 1ypq_A 81 LWEDGSPLMPH-LFRVRGAVSQTYPSGTCAYIQRG------AVYAENCILAAFSICQKK 132 (135)
T ss_dssp EETTSCBCCTT-SCCEEESCSCCCTTCEEEEEETT------EEEEEETTSCBEEEEEEE
T ss_pred EeCCcCccCcc-cccccCCCCCCCCCCCeeEEeCC------cEEccCCCCCeeeEeeec
Confidence 99999998643 5678777776 47899988632 689999999999999973
No 134
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.87 E-value=1.5e-21 Score=191.23 Aligned_cols=185 Identities=29% Similarity=0.432 Sum_probs=150.7
Q ss_pred EEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE--ecCEEEEEeCCCCCCCeE
Q psy12060 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAM 562 (978)
Q Consensus 485 V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~ 562 (978)
+..+|.+...+....+.+|++++|.|.+.+.|.+.+.|++++..+.. ...++.+ ....|.|.++.. +|+|.
T Consensus 4 ~~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~------~~~~~~~~~~~~~L~i~~~~~-~d~G~ 76 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKL------FDTRYSIRENGQLLTILSVED-SDDGI 76 (192)
T ss_dssp CCEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCT------TCTTEEEEGGGTEEEESSCCG-GGCEE
T ss_pred cCCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccc------cCccEEEcCCccEEEEcCCCc-ccCeE
Confidence 34578888888888899999999999999999999999999998863 2234433 334699999986 99999
Q ss_pred EEEEEEcCCCce-eeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecC
Q psy12060 563 YQCRAKNQLKTR-YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 641 (978)
Q Consensus 563 Y~C~a~n~~g~~-~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~ 641 (978)
|+|.+.|..|.. .....+.|.. +|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+....+..+..++
T Consensus 77 Y~C~~~~~~~~~~~~~~~l~v~~-~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~ 153 (192)
T 2iep_A 77 YCCTANNGVGGAVESCGALQVKM-KPKITRPP--INVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESG 153 (192)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEE-EEEEEECC--CCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTS
T ss_pred EEEEEEcCCCceeEeEEEEEEEe-CCccccCC--cceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCC
Confidence 999999988774 4455666664 56555443 3455789999999999999999999999999999888888888888
Q ss_pred cEEEccccCCCCEEEEEEEEeCCceeee-eEEEEEEeCC
Q psy12060 642 NLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGP 679 (978)
Q Consensus 642 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~p 679 (978)
+|.|.++..+|+|.|+|.|.|..|...+ .+.|.|..+|
T Consensus 154 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 154 SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 9999999999999999999999998844 5788876554
No 135
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.87 E-value=5.5e-21 Score=190.27 Aligned_cols=185 Identities=28% Similarity=0.463 Sum_probs=142.5
Q ss_pred EeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE----ecCEEEEEeCC-CCCCC
Q psy12060 486 QAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI----QDNVLTIRYLN-PERDP 560 (978)
Q Consensus 486 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~-~~~d~ 560 (978)
..+|.|...+.+..+.+|+++.|.|.+.|.|.+.|.|+|+|..+... ...... ....|.|.++. . +|+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~------~~~~~~~~~~~~~~L~i~~v~~~-~d~ 76 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQ------RFEVIEFDDGSGSVLRIQPLRTP-RDE 76 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCT------TEEEEEEGGGTEEEEEECSCCTT-TTC
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCC------ceeEEEEcCCCceEEEEeccCCC-CCC
Confidence 46788888888888999999999999999999999999999988632 111111 12369999984 5 899
Q ss_pred eEEEEEEEcCCCceeeEEEEEEEEcC------CccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCC--
Q psy12060 561 AMYQCRAKNQLKTRYSSAQLRVLTLK------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-- 632 (978)
Q Consensus 561 G~Y~C~a~n~~g~~~~~~~l~v~~~~------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~-- 632 (978)
|.|+|.|.|..|.......|.|...+ |.+...+ ....+..|+.+.|.|.+.|.|.|.+.|+++|..+...
T Consensus 77 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~ 154 (212)
T 2yd6_A 77 AIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGP--QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNN 154 (212)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC-----
T ss_pred eEEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCC--cceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCC
Confidence 99999999999887777888887421 3333332 3345788999999999999999999999999988754
Q ss_pred -CcEEEeec---CcEEEccccCCCCEEEEEEEEeCCceeeee-EEEEEEeCC
Q psy12060 633 -GRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGP 679 (978)
Q Consensus 633 -~~~~~~~~---~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~p 679 (978)
.++..... +.|.|.++..+|+|.|+|.|.|..|...++ +.|.|..+|
T Consensus 155 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 155 NGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp -CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 34443332 569999999999999999999999998654 577776544
No 136
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.87 E-value=2.2e-21 Score=227.81 Aligned_cols=210 Identities=20% Similarity=0.350 Sum_probs=161.7
Q ss_pred CCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCC-CceEEEEeeCCeeEEEeecCCC-CCCCceeEEEEEeeccc------
Q psy12060 749 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLP-GGVQVVEVHKTSATIQWTDGAT-NGRPITHYKIIARTNWN------ 820 (978)
Q Consensus 749 ~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P-~~~~~~~~~~~~v~l~W~~p~~-~~~~i~~Y~v~~~~~~~------ 820 (978)
....|.+.| +.|..|..-......+.+.|.+| .++++..++.+++.|+|.+|.+ ++.++. |.|+|+....
T Consensus 132 ~~c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~ 209 (680)
T 1zlg_A 132 NECSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSED 209 (680)
T ss_pred ccCCCcccc-ccccccccccccceeeecccccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCcc
Confidence 456778888 56778875444445568889999 8999999999999999999864 456777 9999997632
Q ss_pred --cCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCC-CCCCCCCceeeccc
Q psy12060 821 --STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD-KPYQAPSRIGGGGG 897 (978)
Q Consensus 821 --~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~-~P~~~P~~~~~~~~ 897 (978)
..|..+.. .....+++.+ |.|++.|.|||.|.|..|.+.++..+..++|.+. .|+.+|.++++...
T Consensus 210 ~~~~w~~v~~----------~~~~~~~i~~-L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~ 278 (680)
T 1zlg_A 210 DATHWQTVAQ----------TTDERVQLTD-IRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANS 278 (680)
T ss_pred ccCceEEEEe----------cCCCeEEeCC-CCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeee
Confidence 46765432 1345688999 9999999999999999994444444446777655 67799999999887
Q ss_pred --ccC---cEEEEEEeCCCCCCCCCcceEEEEEEec-C------CccceeeeeeeccceeEEEEEcCCCCceeeEEEEEE
Q psy12060 898 --KIG---DLSISWEPLPREKQNAPNIYYKIFWRKK-N------DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 965 (978)
Q Consensus 898 --~~~---si~v~W~~p~~~~~~g~i~~Y~i~~~~~-~------~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~ 965 (978)
+.+ +|.|+|++ |...||+|++|+|+|+.. + ...|....+. .....+.|.+|.|++.|.|+|+
T Consensus 279 ~~~~~g~~sv~l~W~p--P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~----~~~~~~~l~~L~p~t~Y~~~V~ 352 (680)
T 1zlg_A 279 TVNSDGSVTVTIVWDL--PEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTD----GFQNSVILEKLQPDCDYVVELQ 352 (680)
T ss_pred eecCCCceEEEEEecC--CCCCCCceeEEEEEEEecccccccCCccceEEEEEc----CCeeEEEeCCCCCCCEEEEEEE
Confidence 778 99999998 445789999999999832 1 1234443222 1224577999999999999999
Q ss_pred EecCCCCCCCCC
Q psy12060 966 AINDVGPGPESE 977 (978)
Q Consensus 966 A~n~~G~gp~S~ 977 (978)
|+|.+|.|++|+
T Consensus 353 A~n~~G~g~~S~ 364 (680)
T 1zlg_A 353 AITYWGQTRLKS 364 (680)
T ss_pred EEECCCcCCCCC
Confidence 999999999885
No 137
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.87 E-value=5e-21 Score=203.11 Aligned_cols=272 Identities=10% Similarity=0.058 Sum_probs=175.8
Q ss_pred eeecCCCeEEEEEeeccC-----CCCeeEEeeCCEEecCCCcEEEeec----CcEEEccccCCCCEEEEEEEEeCCceee
Q psy12060 598 TYAGEGGNVTIFCNPEAA-----PKPKFVWKKDGNIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMDE 668 (978)
Q Consensus 598 ~~~~~g~~~~l~C~~~~~-----p~~~i~W~~~g~~~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 668 (978)
..+..|++++|.|.+.+. |.+.|.|+++|..+..+ +.....+ +.|.|.++...|+|.|.|.+.+..+...
T Consensus 10 ~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~~ 88 (313)
T 2d9q_B 10 PIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQIL 88 (313)
T ss_dssp SEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEEE
T ss_pred cEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCceeE
Confidence 347899999999999987 56899999999988543 2222222 3599999999999999999977655555
Q ss_pred eeEEEEEEeCCceeeeCCCceEE-Ec--cccEEEEEEeeecCCc--CeEEEEeeCCEEccccccccccCCee--ecCCce
Q psy12060 669 SKGRLIVLHGPSYYEQLPPKITI-AA--HRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNI--NIDGGL 741 (978)
Q Consensus 669 ~~~~l~v~~~p~~~~~~~~~~~~-~~--g~~~~l~C~~~~~p~~--~~~~~W~~~g~~~~~~~~~~~~~~~~--~~~~~~ 741 (978)
..+.|.|..+|.. |..+.. .. ...+++.|....+... .+.+.+.+.+....... ...... ......
T Consensus 89 ~~~~l~v~~~P~~----P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 161 (313)
T 2d9q_B 89 DQVELRAGYPPAI----PHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQG---DSILDCVPKDGQSH 161 (313)
T ss_dssp EEEEEEECCCCCC----CEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSCC---CCEEEECCCTTCSE
T ss_pred EEEEEccCCCCCC----CccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccCC---cccccCCCCCCCcE
Confidence 5567777666542 222322 22 2467777765443211 23333332221100000 000000 112245
Q ss_pred EEEec--cCCCCCEEEEEEEEcCCCceee-eEEEEEc--CCCCCCCceEEEEe------eCCeeEEEeecCCCCCCCcee
Q psy12060 742 LEITN--ASFADAGEYECVVKSTVGKIST-KTTVIVE--GPPGLPGGVQVVEV------HKTSATIQWTDGATNGRPITH 810 (978)
Q Consensus 742 l~i~~--~~~~d~g~Y~c~a~n~~G~~s~-~~~l~v~--~~P~~P~~~~~~~~------~~~~v~l~W~~p~~~~~~i~~ 810 (978)
..|.. +.....+.+++.|.|..|...+ ...+... .+|.+|.++++... ..+++.|+|++|...|..+++
T Consensus 162 ~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~ 241 (313)
T 2d9q_B 162 CSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQK 241 (313)
T ss_dssp EEEEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEE
T ss_pred EEECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEE
Confidence 66654 5666677778999999998543 2233322 36899988887654 468999999998765655689
Q ss_pred EEEEEe-eccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCC--CCCCCCCCCC
Q psy12060 811 YKIIAR-TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP--QYNTPADKPY 886 (978)
Q Consensus 811 Y~v~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~--~~~t~~~~P~ 886 (978)
|.|+|+ ..+...|..+.... .....++|.+ |.|++.|.|||+|.|..|.|..|+.+. .++|.+++|.
T Consensus 242 Y~v~y~~~~~~~~w~~~~~~~--------~~~~~~~l~~-L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~ 311 (313)
T 2d9q_B 242 CELRHKPQRGEASWALVGPLP--------LEALQYELCG-LLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAA 311 (313)
T ss_dssp EEEEEEESSSCCCCEEEEEEC--------SCEEEEEECS-CCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC----
T ss_pred EEEEEccCCCCCCcEEccccc--------CcceEEEEeC-CCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCC
Confidence 999999 66677887653211 2346788999 999999999999999999987665442 4567777664
No 138
>1qdd_A Lithostathine; pancreatic stone inhibitor, metal binding protein; HET: SIA NDG GAL; 1.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1lit_A
Probab=99.87 E-value=1.1e-21 Score=180.89 Aligned_cols=132 Identities=17% Similarity=0.297 Sum_probs=113.3
Q ss_pred ccccccccccceeccCeeEEEEccCCCCHHHHHHHhhhc-CCeeeeeCChhhHHHHHHHhhccC-CCCceEEEEeecCCC
Q psy12060 23 DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSP 100 (978)
Q Consensus 23 ~~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~-~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~ 100 (978)
+.....||.+|+.|+++||+|+... ++|.+|+..|+.+ ||+||+|++++|++||.+++.... ....+||||.+...+
T Consensus 8 ~~~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~gg~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~ 86 (144)
T 1qdd_A 8 PQARISCPEGTNAYRSYCYYFNEDR-ETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTDDFNVWIGLHDPKKN 86 (144)
T ss_dssp CGGGTSCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSCEECCCCSHHHHHHHHHHHHHTTCCCSEEEEEEECTTSS
T ss_pred CCCCCCCCCCceecCCEeEEEeCCC-cCHHHHHHHhhccCCceECccCCHHHHHHHHHHHHhcCCCCCCEEEeeEcCCCC
Confidence 3445689999999999999999994 9999999999998 899999999999999999886543 345799999998888
Q ss_pred ccEEEcCCCCCCcccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 101 NLWVNEDGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 101 ~~w~w~dg~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
+.|.|.||+++.+ ..|.+++|++ ..++|+.+....+ ...|.+..|.....|+|+.
T Consensus 87 ~~~~W~dg~~~~~--~~W~~~~P~~~~~~~Cv~~~~~~~--~~~W~d~~C~~~~~fICe~ 142 (144)
T 1qdd_A 87 RAWHWSSGSLVSY--KSWGIGAPSSVNPGYCVSLTSSTG--FQKWKDVPCEDKFSFVCKF 142 (144)
T ss_dssp SCCEETTCCCCCC--CCBCTTCSCSSSCCSEEEEEGGGT--TCSEEEECTTSCEEEEEEE
T ss_pred CeEEeCCCCCcCc--CccCCCCcCCCCCCCcEEEEecCC--CCeEeCCCCCCCceeeeee
Confidence 9999999999864 5688888876 5789999976543 2368999999999999997
No 139
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.87 E-value=5.5e-21 Score=188.06 Aligned_cols=182 Identities=26% Similarity=0.407 Sum_probs=147.6
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE---ecC--EEEEEeCCCCCCCe
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI---QDN--VLTIRYLNPERDPA 561 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~---~~~--~l~i~~~~~~~d~G 561 (978)
.+|.+...+....+.+|++++|.|.+.+.|.+.+.|+|+|..+... ..++.+ ..+ .|.|.++.. +|+|
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~------~~~~~~~~~~~~~~~L~i~~~~~-~d~G 75 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIAD------GLKYRIQEFKGGYHQLIIASVTD-DDAT 75 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCC------SSSEEEEEETTTEEEEEECSCCG-GGCS
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccC------CCcEEEEEcCCCEEEEEECcCCH-HhCE
Confidence 3677887788888999999999999999999999999999988632 223322 122 899999996 9999
Q ss_pred EEEEEEEcCCCceeeEEEEEEEEcCCccccCC---CCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEe
Q psy12060 562 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 638 (978)
Q Consensus 562 ~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~---~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~ 638 (978)
.|+|.+.|..|.......|.|.. +|.+.... ......+..|+.+.|.|.+.+.|.|.+.|++++..+....++.+.
T Consensus 76 ~Y~C~~~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~ 154 (197)
T 2j8h_A 76 VYQVRATNQGGSVSGTASLEVEV-PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVI 154 (197)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEE-EEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEE
T ss_pred EEEEEEEECCCceeEEEEEEEcC-CCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEE
Confidence 99999999988877778888775 33332211 123455788999999999999999999999999999877776664
Q ss_pred ec---CcEEEcc-ccCCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 639 EN---GNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 639 ~~---~~l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
.. +.|.|.+ +..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 155 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 155 VTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp ECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 33 4699999 99999999999999999999888888875
No 140
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.87 E-value=3.2e-21 Score=192.00 Aligned_cols=170 Identities=25% Similarity=0.423 Sum_probs=136.1
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceee-----ecccEEEeCCC-CCCCCeEEEEEEEeCCCceEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFE-----NFNRILTIPNV-KVEDQGEYICRASNDRSALESSVT 482 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~-----~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~~~~~~ 482 (978)
..+.+|++++|.|.+.|.|.+.|+|+|++..+....... .....|.|.++ +.+|+|.|+|.|.|..|.....+.
T Consensus 16 ~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~ 95 (212)
T 2yd6_A 16 QTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTR 95 (212)
T ss_dssp EEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEE
T ss_pred eEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEE
Confidence 356799999999999999999999999999987654321 13457999999 599999999999999999888999
Q ss_pred EEEEee-------ceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEe----cCEEEE
Q psy12060 483 ISIQAE-------PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ----DNVLTI 551 (978)
Q Consensus 483 l~V~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~----~~~l~i 551 (978)
|.|..+ |.+...+....+.+|+.++|.|.+.|.|.+.+.|+|+|..+.... ...++... ...|.|
T Consensus 96 l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~----~~~~~~~~~~~~~~~L~i 171 (212)
T 2yd6_A 96 LTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSN----NNGRIKQLRSESIGALQI 171 (212)
T ss_dssp EEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC----------CCEEEEEETTEEEEEE
T ss_pred EEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcC----CCceEEEEecCCeEEEEE
Confidence 999875 566666666778899999999999999999999999999886431 11222221 258999
Q ss_pred EeCCCCCCCeEEEEEEEcCCCceeeE-EEEEEE
Q psy12060 552 RYLNPERDPAMYQCRAKNQLKTRYSS-AQLRVL 583 (978)
Q Consensus 552 ~~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~ 583 (978)
.++.. +|+|.|+|.|.|..|...++ +.|.|.
T Consensus 172 ~~~~~-~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 172 EQSEE-SDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp CSCCG-GGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cCCCc-ccCEEEEEEEECCCCccccccccEEEE
Confidence 99986 99999999999999987554 456655
No 141
>2ox9_A Collectin placenta 1; C-type lectin, sugar binding protein; HET: GAL NAG FUC; 1.95A {Mus musculus} PDB: 2ox8_A
Probab=99.87 E-value=6.8e-22 Score=180.71 Aligned_cols=123 Identities=24% Similarity=0.430 Sum_probs=107.5
Q ss_pred ccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEc
Q psy12060 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (978)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~ 106 (978)
..||.+|..|+++||+|+.. +++|.+|+.+|+.+||+||+|++++|++||.+++.. ...+||||.+...++.|.|.
T Consensus 3 ~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~---~~~~WIGl~~~~~~~~~~W~ 78 (140)
T 2ox9_A 3 NGCPPHWKNFTDKCYYFSLE-KEIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTVG---RESHWIGLTDSEQESEWKWL 78 (140)
T ss_dssp -CCCTTCEEETTEEEEECSC-CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHHTCCS---SSCEEEEEECSSSTTCCEET
T ss_pred CCCCcCceEcCCEEEEEECC-CcCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHHhcC---CCCEEeeeEeCCCCCceEeC
Confidence 47999999999999999998 499999999999999999999999999999988742 46799999999888999999
Q ss_pred CCCCCCcccccCCCCCCCc------ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 107 DGTNLNELDAAFLPEPADN------VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 107 dg~~~~~~~~~~~~~~~~~------~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
||+++.+ ..|.+++|++ ..++|+.+.... .|.+..|.....|+|+..
T Consensus 79 dg~~~~~--~~W~~~~P~~~~~~~~~~~~Cv~~~~~g-----~W~d~~C~~~~~fICe~~ 131 (140)
T 2ox9_A 79 DGSPVDY--KNWKAGQPDNWGSGHGPGEDCAGLIYAG-----QWNDFQCDEINNFICEKE 131 (140)
T ss_dssp TSCBCCS--CCBCTTCCCCTTTTTSSCCCEEEECGGG-----CEEEECTTSCBEEEEEEE
T ss_pred CcCcCCc--cCcCCcCCCCcccCCCCCCCCceECCCC-----eEeccCCCCCceeEEeec
Confidence 9999754 5688888875 468999886432 689999999999999984
No 142
>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling protein; 2.30A {Homo sapiens} SCOP: d.169.1.1
Probab=99.87 E-value=9.7e-22 Score=176.75 Aligned_cols=119 Identities=26% Similarity=0.452 Sum_probs=104.1
Q ss_pred ccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcCC
Q psy12060 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDG 108 (978)
Q Consensus 29 Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~dg 108 (978)
||++|..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++. ...+||||.+. ++.|.|.||
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~--~~~~~W~dg 73 (128)
T 1dv8_A 1 CPVNWVEHERSCYWFSRSG-KAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIG----PVNTWMGLHDQ--NGPWKWVDG 73 (128)
T ss_dssp CCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC----SSCEEEEEECT--TSSCEETTC
T ss_pred CCCcceecCCEEEEEECCC-cCHHHHHHHHhhCCCEEcccCCHHHHHHHHHhhC----CCCEEeeEEcC--CCcEEeCCC
Confidence 9999999999999999994 9999999999999999999999999999999884 35789999975 889999999
Q ss_pred CCCCcccccCCCCCCCc-------ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 109 TNLNELDAAFLPEPADN-------VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 109 ~~~~~~~~~~~~~~~~~-------~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
+++...+..|.+++|++ ..++|+.+.... .|.+..|.....|+|+.
T Consensus 74 ~~~~~~~~~W~~g~P~~~~~~~~~~~~~C~~~~~~g-----~W~~~~C~~~~~fICe~ 126 (128)
T 1dv8_A 74 TDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDG-----RWNDDVCQRPYRWVCET 126 (128)
T ss_dssp CCSTTSCCCBCTTCCCCCCTTSSSSCCCEEEECTTS-----CEEEECTTSCBEEEEEE
T ss_pred CcCCcccccCCCCCCCCcccccCCCCCcCceecCCC-----cCCCccCCCCcceeeee
Confidence 99842346688888875 467999986432 68999999999999997
No 143
>1hq8_A NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {Mus musculus} SCOP: d.169.1.1 PDB: 1jsk_A 1kcg_A*
Probab=99.87 E-value=2.6e-22 Score=178.43 Aligned_cols=119 Identities=22% Similarity=0.376 Sum_probs=105.0
Q ss_pred ccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEE
Q psy12060 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~ 104 (978)
.|..||.+|+.|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||..+ ...+||||.+...++.|.
T Consensus 2 ~c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~------~~~~WIGl~~~~~~~~w~ 74 (123)
T 1hq8_A 2 YCGPCPNNWICHRNNCYQFFNEE-KTWNQSQASCLSQNSSLLKIYSKEEQDFLKLV------KSYHWMGLVQIPANGSWQ 74 (123)
T ss_dssp CCCCCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCSCTTTTGGGGGC------CSCEEEEEEECTTTCCEE
T ss_pred cCCCCCcccEEcCCEEEEEeCCc-cCHHHHHHHHHhcCCEecccCCHHHHHHHHhc------cCCEEEEeeecCCCCCeE
Confidence 46789999999999999999995 99999999999999999999999999999753 257899999988899999
Q ss_pred EcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 105 w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|.||+++.+ ..|.+++|+ .++|+.+.... .|.+..|.....|+|+.
T Consensus 75 W~dg~~~~~--~~w~~~~p~--~~~C~~~~~~~-----~w~~~~C~~~~~fICe~ 120 (123)
T 1hq8_A 75 WEDGSSLSY--NQLTLVEIP--KGSCAVYGSSF-----KAYTEDCANLNTYICMK 120 (123)
T ss_dssp ETTSCBCCT--TTCEEECCT--TCCEEEECSTT-----EEEEECTTSCEEEEEEE
T ss_pred eCCCCCccc--cccccCCCC--CCCcEEEeccC-----CEeccCCCCCceeEeee
Confidence 999999864 568777776 57999986542 68999999999999997
No 144
>2kv3_A Regenerating islet-derived protein 4; GISP, C-type lectin, REG IV, disulfide bond, glycoPro lectin, secreted, sugar binding protein; NMR {Homo sapiens}
Probab=99.87 E-value=5.3e-22 Score=179.60 Aligned_cols=126 Identities=17% Similarity=0.284 Sum_probs=110.1
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhc--CCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~--~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
.||++|+.|+++||+|+... ++|.+|+..|+.+ ||+||+|++++|++||.+++........+||||.+...++.|.|
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 80 (131)
T 2kv3_A 2 SCAPGWFYHKSNCYGYFRKL-RNWSDAELECQSYGNGAHLASILSLKEASTIAEYISGYQRSQSIWIGLHDPQKRQQWQW 80 (131)
T ss_dssp CSCTTCCEETTEEEEEEEEE-ECHHHHHHHHHTTSSSCEECCCSSHHHHHHHHHHHTCTTSCCCCBCSEECSSSSSCCEE
T ss_pred cCCcccEEcCCEeEEEECCC-CCHHHHHHHHhccCCCceEeeeCCHHHHHHHHHHHHhcCCCCCEEEeccCCCCCCCeEe
Confidence 69999999999999999995 9999999999999 99999999999999999998654334678999999888899999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|.+++| ...++|+.+....+ ...|.+..|.....|+|+.
T Consensus 81 ~dg~~~~~--~~W~~~~P-~~~~~C~~~~~~~~--~~~W~~~~C~~~~~~iCe~ 129 (131)
T 2kv3_A 81 IDGAMYLY--RSWSGKSM-GGNKHCAEMSSNNN--FLTWSSNECNKRQHFLCKY 129 (131)
T ss_dssp TTCCCCSS--CCCSSCCC-TTCTTEEEECTTCT--TCCEEEECTTCCEEEEEEE
T ss_pred CCcCcccc--cccCCCCC-CCCCCceEEECCCC--cCceecCCCCCCceEEEee
Confidence 99999854 56888887 56789999876543 2358999999999999997
No 145
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.87 E-value=1.4e-20 Score=220.99 Aligned_cols=305 Identities=14% Similarity=0.143 Sum_probs=196.8
Q ss_pred CCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeee----cCCcCeEEEEeeCCE-Eccc
Q psy12060 650 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT----EELLDVAYIWTHNGV-RIGN 724 (978)
Q Consensus 650 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~----~p~~~~~~~W~~~g~-~~~~ 724 (978)
.++.|.+.| ..|..|..-......+...|..+. ....+.......+.|.|.... .+.. +.+.|..... ....
T Consensus 132 ~~c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~-~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~ 208 (680)
T 1zlg_A 132 NECSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPR-KELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSE 208 (680)
T ss_pred ccCCCcccc-ccccccccccccceeeeccccccc-ccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCc
Confidence 456788888 456666643322223333333210 111223345678999998752 2222 4445544311 0000
Q ss_pred cccccccCCee-ecCCceEEEeccCCCCCEEEEEEEEcCCCc---eeeeEEEEE--c-CCCCCCCceEEEEe--eCC---
Q psy12060 725 MDLNELETPNI-NIDGGLLEITNASFADAGEYECVVKSTVGK---ISTKTTVIV--E-GPPGLPGGVQVVEV--HKT--- 792 (978)
Q Consensus 725 ~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~---~s~~~~l~v--~-~~P~~P~~~~~~~~--~~~--- 792 (978)
... .....+ ......+.|.++.....+.|++.|.|..|. .+.+..+.. . .+|.+|.++++... +.+
T Consensus 209 ~~~--~~w~~v~~~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~ 286 (680)
T 1zlg_A 209 DDA--THWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSV 286 (680)
T ss_pred ccc--CceEEEEecCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCce
Confidence 000 000111 123457888888888888889999999882 222333333 2 57899999999887 778
Q ss_pred eeEEEeecCCCCCCCceeEEEEEeec-c------ccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecC
Q psy12060 793 SATIQWTDGATNGRPITHYKIIARTN-W------NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 865 (978)
Q Consensus 793 ~v~l~W~~p~~~~~~i~~Y~v~~~~~-~------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~ 865 (978)
++.|+|.+|.+.+++|.+|.|+|+.. . ...|..... ......++|.+ |.|++.|.|+|+|.|.
T Consensus 287 sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v---------~~~~~~~~l~~-L~p~t~Y~~~V~A~n~ 356 (680)
T 1zlg_A 287 TVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTT---------DGFQNSVILEK-LQPDCDYVVELQAITY 356 (680)
T ss_pred EEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEE---------cCCeeEEEeCC-CCCCCEEEEEEEEEEC
Confidence 99999999987888999999999832 1 123443211 12346789999 9999999999999999
Q ss_pred CccCCCCCC--CCCCCCCCCCCCCCCCceeecccccCcEEE-----------EEEeCCCCCCCCCcceEEEEEEecCCcc
Q psy12060 866 LGYGEPSSP--SPQYNTPADKPYQAPSRIGGGGGKIGDLSI-----------SWEPLPREKQNAPNIYYKIFWRKKNDTE 932 (978)
Q Consensus 866 ~G~g~~s~~--~~~~~t~~~~P~~~P~~~~~~~~~~~si~v-----------~W~~p~~~~~~g~i~~Y~i~~~~~~~~~ 932 (978)
.|.|++|.. ...++|.+.+|. |.++.+...+.++|.| +|.+|. .. +.+.+|+|+|+..+...
T Consensus 357 ~G~g~~S~~~~~v~~~T~~~~P~--p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~--~~-~~~~~y~v~w~~~~~~~ 431 (680)
T 1zlg_A 357 WGQTRLKSAKVSLHFTSTHATNN--KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPF--YQ-DGQLQVKVYWKKTEDPT 431 (680)
T ss_pred CCcCCCCCCceeEEEECCCCCCC--ccccccccccCccccccccccCCCccccccCCc--cc-CCcceEEEEEeCCCCCc
Confidence 999998876 125677777774 8899999888999887 999853 23 34678999998765322
Q ss_pred -------ceeee---------eeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCC
Q psy12060 933 -------FQSET---------LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 974 (978)
Q Consensus 933 -------~~~~~---------~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp 974 (978)
|.... ...........+.|.+|.|++.|.|+|+|+|.+|.|+
T Consensus 432 v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~ 489 (680)
T 1zlg_A 432 VNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSK 489 (680)
T ss_pred cceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCC
Confidence 11000 0000011223577999999999999999999999554
No 146
>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_B
Probab=99.87 E-value=8.9e-22 Score=175.88 Aligned_cols=120 Identities=23% Similarity=0.270 Sum_probs=105.1
Q ss_pred ccccccceeccCeeEEEEccCCCCHHHHHHHhh--hcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEE
Q psy12060 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK--SLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~--~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~ 104 (978)
..||++|+.|+++||+++... ++|.+|+..|+ .+||+||+|++++|++||.+++........+||||.+...++.|.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WiGl~~~~~~~~~~ 80 (125)
T 1jwi_B 2 EGCLPDWSSYKGHCYKVFKVE-KTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKMRIVLVWIGLSHFWRICPLR 80 (125)
T ss_dssp -CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHTTCCCEEEEEEEECGGGSCEE
T ss_pred CCCCCCCEecCCEEEEEECCC-cCHHHHHHHhhccCCCceECccCCHHHHHHHHHHHHhcCCCCCEEEeeecCCCCCceE
Confidence 469999999999999999995 99999999999 899999999999999999999866444568999999998899999
Q ss_pred EcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 105 w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|.||+++.+ ..|.+++| |+.+.... ..|.+..|.....|+|+.
T Consensus 81 W~dg~~~~~--~~W~~g~p------C~~~~~~~----~~W~~~~C~~~~~~iCe~ 123 (125)
T 1jwi_B 81 WTDGARLDY--RALSDEPI------CFVAESFH----NKWIQWTCNRKKSFVCKY 123 (125)
T ss_dssp ETTCCCCCS--CCSCCSCE------EEEEETTT----CCEEEEETTSCEEEEEEE
T ss_pred eeCcCcCcc--CCcCCCCC------eEEEECCC----CeEecCCCCCCCcEEEeE
Confidence 999999854 45777665 98887643 268999999999999997
No 147
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.86 E-value=1.7e-20 Score=199.82 Aligned_cols=260 Identities=17% Similarity=0.140 Sum_probs=174.3
Q ss_pred eeecCCCeEEEEEeeccCC-CCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 598 TYAGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 598 ~~~~~g~~~~l~C~~~~~p-~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
+.+..|++++|.|.+.+.+ .+.|.|++++..+..........+++|.|.++...|+|.|+|.+ .|.....+.|.|.
T Consensus 16 v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~---~g~~~~~~~L~V~ 92 (325)
T 1n26_A 16 LTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYR---AGRPAGTVHLLVD 92 (325)
T ss_dssp EEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEES---SSSCSCEEEEEEC
T ss_pred EECCCCCcEEEEeCCCCCCCCceEEEEECCccCCccccccccccceEEecccchhhCeEeEEEe---CCEEeeeEEEEec
Confidence 3346999999999998765 67999999887653332233345678999999999999999993 6788888999998
Q ss_pred eCCceeeeCCCceEEE-cc--ccEEEEEEeeecC--CcCeEEEEeeC-CEEccccccccccCCee-ecCCceEEEeccC-
Q psy12060 677 HGPSYYEQLPPKITIA-AH--RNLQLRCSAHTEE--LLDVAYIWTHN-GVRIGNMDLNELETPNI-NIDGGLLEITNAS- 748 (978)
Q Consensus 677 ~~p~~~~~~~~~~~~~-~g--~~~~l~C~~~~~p--~~~~~~~W~~~-g~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~- 748 (978)
.+|..+ . +... .+ ..+.+.|....+. ...+.+.+.+. +.... ... ..-... ......+.|..+.
T Consensus 93 ~pP~~P----~-l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~--~~~-~~c~~~~~~~~~~c~i~~~~~ 164 (325)
T 1n26_A 93 VPPEEP----Q-LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAE--DFQ-EPCQYSQESQKFSCQLAVPEG 164 (325)
T ss_dssp CCCCCC----C-CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSSCE--EEE-EEEEEETTTTEEEEEECCCTT
T ss_pred cCCCCC----c-eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCCCC--ccc-ccCCCCCCCCCEEEEECCCcc
Confidence 877522 2 3333 23 3455555432221 12233333321 11000 000 000000 0112356666554
Q ss_pred CCCCEEEEEEEEcCCCceee-eEEEEE--cCCCCCCCceEEEEeeC--CeeEEEeecCCC--CCCCceeEEEEEeecccc
Q psy12060 749 FADAGEYECVVKSTVGKIST-KTTVIV--EGPPGLPGGVQVVEVHK--TSATIQWTDGAT--NGRPITHYKIIARTNWNS 821 (978)
Q Consensus 749 ~~d~g~Y~c~a~n~~G~~s~-~~~l~v--~~~P~~P~~~~~~~~~~--~~v~l~W~~p~~--~~~~i~~Y~v~~~~~~~~ 821 (978)
....+.|+|.|.|..|.... ...+.+ ..+|.+|.++++..... +++.|+|++|.. .++.+++|.|+|+..+..
T Consensus 165 ~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~ 244 (325)
T 1n26_A 165 DSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSK 244 (325)
T ss_dssp CCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCS
T ss_pred cCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCC
Confidence 34566778999999997643 333332 35799999999877653 699999999875 466889999999998878
Q ss_pred CceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCC
Q psy12060 822 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 878 (978)
Q Consensus 822 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~ 878 (978)
.|...... .....++|.+ |.|++.|.|||+|.|..|.|.+|+.+..+
T Consensus 245 ~W~~~~~~---------~~~~~~~l~~-L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~ 291 (325)
T 1n26_A 245 TFTTWMVK---------DLQHHCVIHD-AWSGLRHVVQLRAQEEFGQGEWSEWSPEA 291 (325)
T ss_dssp CCEEEECG---------GGCSEEEESS-CCTTCCEEEEEEEEETTTBSCCCCCCCCE
T ss_pred CCEEEccc---------CCceEEEEeC-CCCCCeEEEEEEEecCCCCCCCcCCCCcc
Confidence 89764321 1345778999 99999999999999999999999877544
No 148
>1tdq_B Aggrecan core protein; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: d.169.1.1
Probab=99.86 E-value=1.2e-21 Score=176.83 Aligned_cols=123 Identities=20% Similarity=0.405 Sum_probs=107.2
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
...||++|..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++. ..+||||.+...++.|.|
T Consensus 4 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WIGl~~~~~~~~~~W 77 (130)
T 1tdq_B 4 QEQCEEGWTKFQGHCYRHFPDR-ETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQ-----DYQWIGLNDRTIEGDFRW 77 (130)
T ss_dssp -CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC-----SCEEEEEECSSSTTCCEE
T ss_pred ccCCCcccEEeCCEEEEEECCC-CCHHHHHHHHHhcCCEEeeeCCHHHHHHHHhccC-----CCEEEeeecCCCCCEEEe
Confidence 4579999999999999999994 9999999999999999999999999999998872 578999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCc---ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADN---VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~---~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|.+++|++ ..++|+.+..... ..|.+..|.....|+|+.
T Consensus 78 ~dg~~~~~--~~W~~~~P~~~~~~~~~C~~~~~~~~---~~w~~~~C~~~~~fICe~ 129 (130)
T 1tdq_B 78 SDGHSLQF--EKWRPNQPDNFFATGEDCVVMIWHER---GEWNDVPCNYQLPFTCKK 129 (130)
T ss_dssp TTCCCCCC--CCBCTTCCCCCSTTTEEEEEEETTTT---TEEEEEETTSCEEEEEEE
T ss_pred cCCCcCCc--cccCCCCCCCccCCCCCeEEEccCCC---CcccCcCCCCCeeeeeec
Confidence 99999864 5688888876 3679998864322 278999999999999986
No 149
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.86 E-value=2.8e-21 Score=190.20 Aligned_cols=177 Identities=15% Similarity=0.216 Sum_probs=137.4
Q ss_pred cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCc
Q psy12060 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854 (978)
Q Consensus 775 ~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~ 854 (978)
.++| +|.++++...+.+++.|+|.+|. ++.+.+|.|+|+..+...+.... ........+++.+ |.|++
T Consensus 21 ~~~P-~P~~l~~~~~~~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~~~~~--------~~~~~~~~~~i~~-L~p~t 88 (203)
T 2gee_A 21 MEVP-QPTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFED--------FVDSSVGYYTVTG-LEPGI 88 (203)
T ss_dssp SCCC-CCEEEEEECCTTTCEEEEEECCS--SSSCCEEEEEEEESSSSSCCEEE--------EEETTCCEEEECS-CCTTC
T ss_pred ccCc-CCCccEEEecCCCEEEEEecCCC--CCCccEEEEEEEECCCCCCceeE--------EcCCCccEEEeCC-CCCCC
Confidence 4567 78899999999999999999986 45789999999987654332211 1113467789999 99999
Q ss_pred eeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCc-cc
Q psy12060 855 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EF 933 (978)
Q Consensus 855 ~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~-~~ 933 (978)
.|.|+|.|.|..|.|.++. +.+.+..| +|.++.+...+.++|.|+|++|+ ++.|.+|+|+|+..+.. .+
T Consensus 89 ~Y~~~V~a~~~~g~s~~~~----~~t~~~~p--~P~~l~~~~~~~~sv~l~W~~p~----~~~i~~Y~v~~~~~~~~~~~ 158 (203)
T 2gee_A 89 DYDISVYTVKNGGESTPTT----LTQQTAVP--PPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEEDV 158 (203)
T ss_dssp EEEEEEEEESSSCBCCCEE----EEEECCCC--CCEEEEEEEEETTEEEEEEECCS----SCCCSEEEEEEEETTCGGGC
T ss_pred EEEEEEEEEeCCCccccEe----eeecCCCc--CCCceEEEEcCCCEEEEEEcCCC----CCCccEEEEEEEECCCCCcc
Confidence 9999999999999877653 34444444 79999999999999999999953 56899999999986533 34
Q ss_pred eeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
....+. .+. ..+.|.+|.|++.|.|+|+|.|.+|.|+++.
T Consensus 159 ~~~~~~--~~~--~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~ 198 (203)
T 2gee_A 159 AELSIS--PSD--NAVVLTNLLPGTEYVVSVSSVYEQHESTPLR 198 (203)
T ss_dssp EEEEEC--TTC--CEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred EEEEcC--CCc--CEEEECCCCCCCEEEEEEEEecCCCcCCCee
Confidence 332221 222 3477999999999999999999999999863
No 150
>3bdw_B NKG2-A/NKG2-B type II integral membrane protein; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} PDB: 3cdg_K 3cii_H
Probab=99.86 E-value=9.3e-22 Score=174.13 Aligned_cols=117 Identities=21% Similarity=0.446 Sum_probs=100.4
Q ss_pred ccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEE
Q psy12060 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~ 104 (978)
.|..||++|+.|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||..+. ..+||||.+...++.|.
T Consensus 3 ~c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~------~~~WIGl~~~~~~~~w~ 75 (120)
T 3bdw_B 3 HCGHCPEEWITYSNSCYYIGKER-RTWEESLLACTSKNSSLLSIDNEEEMKFLSIIS------PSSWIGVFRNSSHHPWV 75 (120)
T ss_dssp CCTTSCTTCEESSSSEEEEEEEE-ECHHHHHHHHHHTTSEECCCCCHHHHHHHHHHC------SEEEEEEECSSTTSCCE
T ss_pred cCCCCCCCceEECCEEEEEECCc-cCHHHHHHHHHhCCCEEceeCCHHHHHHHHHcC------CCEeEEEEecCCCCceE
Confidence 46789999999999999999984 999999999999999999999999999998864 57899999988899999
Q ss_pred EcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 105 w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|.||+++.+. . .+|++..++|+.+... .|.+..|.....|+|+.
T Consensus 76 W~dg~~~~~~--~---~~p~~~~~~C~~~~~~------~w~~~~C~~~~~fICe~ 119 (120)
T 3bdw_B 76 TMNGLAFKHE--I---KDSDNAELNCAVLQVN------RLKSAQCGSSIIYHCKH 119 (120)
T ss_dssp ETTSSBCCSC--C---C----CCCCEEEEESS------SEEEECTTSCEEEEEEC
T ss_pred eCCCCccCcc--C---cCCCCCCCCccEEeCC------ceECCCCCCCcceeeee
Confidence 9999998642 2 3455567899998654 37999999999999986
No 151
>1tn3_A Tetranectin; plasminogen binding, kringle 4, C-type lectin, carbohydrate recognition domain; 2.00A {Homo sapiens} SCOP: d.169.1.1 PDB: 1rjh_A 3l9j_C
Probab=99.86 E-value=1.1e-21 Score=179.17 Aligned_cols=128 Identities=15% Similarity=0.198 Sum_probs=109.5
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccC-CCCceEEEEeecCCCccEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~~~w~ 104 (978)
...||+||. |+++||+++... ++|.+|+..|+.+||+||+|++++|++||.+++.... ....+||||.+...++.|.
T Consensus 3 ~~~Cp~gw~-~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~~~w~ 80 (137)
T 1tn3_A 3 QTVCLKGTK-VHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEGTWV 80 (137)
T ss_dssp CCEEEECSS-SSEEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEEEEEETTEEE
T ss_pred CCCCCCCeE-ECCEEEEEeCCC-CCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHHhhcCCCCCEEEeeEccCCCceEE
Confidence 357999998 999999999994 9999999999999999999999999999999885432 3467999999988899999
Q ss_pred EcCCCCCCcccccCC---CCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 105 NEDGTNLNELDAAFL---PEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 105 w~dg~~~~~~~~~~~---~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|.||+++.+ ..|. +++|++ ..++|+.+..... ..|.+..|.....|+|+..
T Consensus 81 W~dg~~~~~--~~W~~~~~g~P~~~~~~~Cv~~~~~~~---~~W~d~~C~~~~~fiCe~~ 135 (137)
T 1tn3_A 81 DMTGARIAY--KNWETEITAQPDGGKTENCAVLSGAAN---GKWFDKRCRDQLPYICQFG 135 (137)
T ss_dssp ETTSCBCSC--CCBCCTTTCSSCCGGGCCEEEEETTTT---TEEEEECTTSCEEEEEEEE
T ss_pred eCCcCCCcc--cccCcCCCCcCCCCCccCCcEEccCCC---CeEeCcCCCCCccceEeEe
Confidence 999999864 5677 777776 4689999865322 3789999999999999973
No 152
>3rs1_A C-type lectin domain family 2 member I; C-type lectin-like, ligand of NK receptor, natural killer CE receptors, surface of activated T lymphocytes; 1.94A {Mus musculus}
Probab=99.86 E-value=1.6e-21 Score=173.28 Aligned_cols=118 Identities=17% Similarity=0.280 Sum_probs=102.8
Q ss_pred cccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccE
Q psy12060 24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW 103 (978)
Q Consensus 24 ~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w 103 (978)
..+..||++|..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||..++. ...+||||.+...++.|
T Consensus 3 ~~~~~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~~~~~~w 77 (122)
T 3rs1_A 3 KTYAACSKNWTGVGNKCFYFSGYP-RNWTFAQAFCMAQEAQLARFDNEEELIFLKRFKG----DFDSWIGLHRESSEHPW 77 (122)
T ss_dssp BSSSSCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCSSHHHHHHHHHHTT----TSCEEEEEECSSTTSCC
T ss_pred cccCCCChhheecCCEEEEEECCc-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHhcC----CCCEEEEEEecCCCCce
Confidence 346789999999999999999984 9999999999999999999999999999998862 35789999999889999
Q ss_pred EEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 104 VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 104 ~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.|.||+++.+ ..|.. +.++|+.+... .|.+..|.....|+|+.
T Consensus 78 ~W~dg~~~~~--~~w~~-----~~~~C~~~~~~------~w~~~~C~~~~~fICek 120 (122)
T 3rs1_A 78 KWTNNTEYNN--MNPIL-----GVGRYAYLSSD------RISSSRSYINRMWICSK 120 (122)
T ss_dssp EETTCCBCCC--CSCCC-----SSCSEEEEETT------EEEEECSCSCBCBEEEE
T ss_pred ECCCCCcCCc--cccCC-----CCCceEEEeCC------cEeccccCCCCCeeeec
Confidence 9999999865 33532 35789988643 58999999999999997
No 153
>3g8k_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.00A {Mus musculus} SCOP: d.169.1.1 PDB: 1qo3_C 3cad_A
Probab=99.86 E-value=1e-21 Score=177.04 Aligned_cols=119 Identities=17% Similarity=0.248 Sum_probs=104.5
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.||.+|+.|+++||+|+.. +++|.+|+.+|+.+||+||+|++++|++||..++. ...+||||.+...++.|.|.|
T Consensus 6 ~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~----~~~~WIGl~~~~~~~~w~W~d 80 (130)
T 3g8k_A 6 GFEKYWFCYGIKCYYFVMD-RKTWSGCKQTCQISSLSLLKIDNEDELKFLKLLVP----SDSYWIGLSYDNKKKDWAWIN 80 (130)
T ss_dssp CBCSEEEEETTEEEEEBSS-CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHSC----SSEEEEEEEEETTTTEEEEGG
T ss_pred CCChhhhhhCCEEEEEECC-CCCHHHHHHHHHhCCCeEcccCCHHHHHHHHHhcC----CCCEEEeeeccCCCCceEeCC
Confidence 5999999999999999999 49999999999999999999999999999988873 357999999988899999999
Q ss_pred CCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 108 GTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|+++.+ . |..++++...++|+.+... .|.+..|.....|+|+..
T Consensus 81 g~~~~~--~-~~~~~~~~~~~~Cv~~~~~------~w~~~~C~~~~~fICe~~ 124 (130)
T 3g8k_A 81 NGPSKL--A-LNTMKYNIRDGGCMLLSKT------RLDNDNCDKSFICICGKR 124 (130)
T ss_dssp GCCCCC--C-CCGGGCCGGGCSEEEEESS------CEEEECTTSCBEEEEEEE
T ss_pred CCccCc--c-cccCCCCCCCCCceEEeCC------eEECCCCCCCCeEeeeee
Confidence 999863 3 4455566678899998532 689999999999999984
No 154
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.86 E-value=3.5e-21 Score=188.40 Aligned_cols=171 Identities=16% Similarity=0.265 Sum_probs=136.5
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCC-CCeEEEEE-cccccccccccccCCCCCCceEe-----ecceEEEe
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-NPSYEWFK-EDYVQDRLVANLIDPLSDKRFTL-----SGGNLIIN 261 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p-~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~i~ 261 (978)
++.|...|.+..+.. |++++|.|.+.+.| .+.+.|+| +|..+.. ...++.. ..++|.|.
T Consensus 2 p~~v~~~p~~~~v~~-----G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~---------~~~~~~~~~~~~~~~~L~i~ 67 (191)
T 1epf_A 2 VLQVDIVPSQGEISV-----GESKFFLCQVAGDAKDKDISWFSPNGEKLSP---------NQQRISVVWNDDDSSTLTIY 67 (191)
T ss_dssp -CCEEEESSSEEEET-----TCCEEEEEEECCCSCCCEEEEECTTSCEECC---------BSSSEEEEEEETTEEEEEEC
T ss_pred ceEEEecCCCcEEcC-----CCCEEEEEECCCCCCCceEEEEeCCCccccC---------CCCeEEEEECCCCceEEEEc
Confidence 456777788777544 56699999999877 78999999 7754421 1223322 24589999
Q ss_pred CCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccc
Q psy12060 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (978)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~ 341 (978)
++ +.+|+|.|+|.|.|..|...+..+.|.|..++.+...+....+..|+.++|.|.+ .+.|.+.|.|+|++..+....
T Consensus 68 ~~-~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~ 145 (191)
T 1epf_A 68 NA-NIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKK 145 (191)
T ss_dssp SC-CGGGCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEE-ECSSCCEEEEEETTEEGGGGC
T ss_pred cC-CcccCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEE-CCCCCCEEEEEECCEEeeccC
Confidence 97 8999999999999998655677888888777766666666778899999999998 488999999999998876666
Q ss_pred cceEEEeeCCcEEEeeeeeecceeeEEEEEeecc
Q psy12060 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 342 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
..++....++.|.|.+++.+|+|.|+|.|.|..+
T Consensus 146 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 179 (191)
T 1epf_A 146 DVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILAR 179 (191)
T ss_dssp CTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGG
T ss_pred CceEEEecCCeEEECCCChhhCEEEEEEEEEecc
Confidence 6777787888999999999999999999999764
No 155
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.86 E-value=3.8e-21 Score=192.56 Aligned_cols=178 Identities=28% Similarity=0.510 Sum_probs=137.5
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceE----EEeCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNL----IINDP 263 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~i~~~ 263 (978)
.+|.|+..|.+..+.+ |+.++|.|.+.|.|.+.|.|+|+|..+... .....++...++.+ .|.++
T Consensus 8 ~~P~i~~~p~~~~v~~-----G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~------~~~~~~~~~~~~~~~~~l~i~~v 76 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKK-----NEPATLNCKVEGKPEPTIEWFKDGEPVSTN------EKKSHRVQFKDGALFFYRTMQGK 76 (217)
T ss_dssp CCCEEEECCCCEEECT-----TSCEEECCEEECSSCCEEEEEETTEECCCS------SSSSSEEECTTSCEEESSCCBSS
T ss_pred CCCEEecCCCceEEeC-----CCcEEEEEEcCCCCCCeEEEEECCcCccCC------CccceeEEecCCceEEEEEeccC
Confidence 4689999998877654 566999999999999999999999765321 11123334445544 45565
Q ss_pred CCCCCCeEEEEEEEeCceeEEeEEEEEEEeeec-ccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccc---
Q psy12060 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIG-EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV--- 339 (978)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~-~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~--- 339 (978)
+.+|+|.|+|.|.|..|...+..+.|.|...+ .+...+....+..|+.++|.|.+..+.|.+.|+|+|++.++..
T Consensus 77 -~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~ 155 (217)
T 2vr9_A 77 -KEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKA 155 (217)
T ss_dssp -SCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCC
T ss_pred -CcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccc
Confidence 89999999999999999877777888877643 4444455667788999999999877889999999999877542
Q ss_pred ---cccceEEEeeCCcEEEeeeeeecceeeEEEEEeecccc
Q psy12060 340 ---EEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDT 377 (978)
Q Consensus 340 ---~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~ 377 (978)
....+..+..+++|.|.+++.+|+|.|+|.|.|..|..
T Consensus 156 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 196 (217)
T 2vr9_A 156 MSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTR 196 (217)
T ss_dssp C---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEE
T ss_pred cccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEccccee
Confidence 13455566677899999999999999999999998644
No 156
>2b6b_D CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahedral virus, virus-recepto; 25.00A {Homo sapiens} SCOP: d.169.1.1
Probab=99.86 E-value=1.7e-21 Score=183.86 Aligned_cols=128 Identities=22% Similarity=0.400 Sum_probs=111.0
Q ss_pred cccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccE
Q psy12060 24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW 103 (978)
Q Consensus 24 ~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w 103 (978)
..+..||.+|..|+++||+|+... ++|.+|+.+|+.+||+||+|++++|++||..++.. ....+||||.+...++.|
T Consensus 22 ~~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~--~~~~~WIGl~~~~~~~~w 98 (175)
T 2b6b_D 22 RLCHPCPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR--SNRFTWMGLSDLNQEGTW 98 (175)
T ss_pred cccCCCCcCcEEeCCEEEEEECCc-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHhcc--CCCcEEEeeEccCCCCcE
Confidence 456789999999999999999994 99999999999999999999999999999887632 346799999998889999
Q ss_pred EEcCCCCCCcc-cccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 104 VNEDGTNLNEL-DAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 104 ~w~dg~~~~~~-~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.|.||+.+.+. +..|..++|++ ..++|+.+... .|.+..|.....|+|+..
T Consensus 99 ~W~dGs~~~~~~~~~W~~geP~~~~~~~Cv~~~~~------gW~d~~C~~~~~fICe~~ 151 (175)
T 2b6b_D 99 QWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKCNLAKFWICKKS 151 (175)
T ss_pred EeCCCCCcccccccCCCCCCCCCCCCCCeeEEcCC------ceEccCCCCCeeEEEEEC
Confidence 99999998742 35688888876 47899988653 389999999999999984
No 157
>2c6u_A CLEC1B protein; lectin, rhodocytin, aggretin, C-type lectin-like, platelets, thrombosis; 1.6A {Homo sapiens}
Probab=99.86 E-value=5.5e-22 Score=176.22 Aligned_cols=118 Identities=20% Similarity=0.426 Sum_probs=104.5
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.||++|+.|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++. ..+||||.+...++.|.|.|
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~L~~i~s~~e~~~l~~~~~-----~~~WiGl~~~~~~~~~~W~d 75 (122)
T 2c6u_A 2 PCDTNWRYYGDSCYGFFRHN-LTWEESKQYCTDMNATLLKIDNRNIVEYIKARTH-----LIRWVGLSRQKSNEVWKWED 75 (122)
T ss_dssp CSCTTEEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHTTCC-----SCEEEEEECSSTTSCCBCTT
T ss_pred CCCccceEeCCEEEEEECCc-CCHHHHHHHHHhCCCeEeeECCHHHHHHHHHhhc-----CCEEEEeeecCCCCCeEeCC
Confidence 69999999999999999995 9999999999999999999999999999988874 35799999988899999999
Q ss_pred CCCCCcccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 108 GTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|+++.+ .|.+++|++ +.++|+.+. .+ .|.+..|.....|+|+..
T Consensus 76 g~~~~~---~W~~~~P~~~~~~~C~~~~--~g----~w~~~~C~~~~~~ICe~~ 120 (122)
T 2c6u_A 76 GSVISE---NMFEFLEDGKGNMNCAYFH--NG----KMHPTFCENKHYLMCERK 120 (122)
T ss_dssp SCBCCG---GGGGGBCCCCTTCCEEEEE--TT----EEEEECTTSCEEEEEEEE
T ss_pred CCccCc---CcccCCCCCCCCCCeeEEc--CC----eEEeccCCCCceEeeeec
Confidence 999864 577777776 467999983 12 789999999999999973
No 158
>1wmz_A Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type; C-type lectin, N-acetylgalactosamine, invertebrate, sugar binding protein; HET: NGA A2G; 1.70A {Cucumaria echinata} SCOP: d.169.1.1 PDB: 1wmy_A*
Probab=99.86 E-value=9.9e-22 Score=179.92 Aligned_cols=127 Identities=20% Similarity=0.419 Sum_probs=110.9
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhh-------hcCCeeeeeCChhhHHHHHHHhhccC-CCCceEEEEeecCC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCK-------SLDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQS 99 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~-------~~~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~ 99 (978)
.||++|+.|+++||+++... ++|.+|+..|+ .+||+||+|++++|++||.+++.... ....+||||.+...
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~~ 80 (140)
T 1wmz_A 2 QCPTDWEAEGDHCYRFFNTL-TTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNYWRGIDSQAGQLWIGLYDKYN 80 (140)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTTCBGGGTEEEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECSSS
T ss_pred cCCCcceecCCEEEEEECCC-cCHHHHHHhhhhhccCCCCCCcEEcccCCHHHHHHHHHHHhhccCCCCCEEEeeeecCC
Confidence 69999999999999999995 99999999999 99999999999999999999986542 34679999999888
Q ss_pred CccEEEcCCCCCCcccccCCCCCCCcc--cCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 100 PNLWVNEDGTNLNELDAAFLPEPADNV--QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 100 ~~~w~w~dg~~~~~~~~~~~~~~~~~~--~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
++.|.|.||+++.+ ..|.+++|++. .++|+.+....+. .|.+..|.....|+|+..
T Consensus 81 ~~~~~W~dg~~~~~--~~W~~~~P~~~~~~~~Cv~~~~~~~~---~W~~~~C~~~~~fICe~~ 138 (140)
T 1wmz_A 81 EGDFIWTDGSKVGY--TKWAGGQPDNWNNAEDYGQFRHTEGG---AWNDNSAAAQAKYMCKLT 138 (140)
T ss_dssp TTCCEETTCCCCCC--CCBCTTCCCCGGGCEEEEEECSSTTT---CEEEEETTCCEEEEEEEE
T ss_pred CCeeEECCcCcccc--cCcCcccCCCCCCcCCcEEEccCCCC---CEeCCCCCCCceEEEEEe
Confidence 99999999999854 56888888763 7799998766432 689999999999999973
No 159
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.86 E-value=3.4e-21 Score=189.55 Aligned_cols=167 Identities=19% Similarity=0.349 Sum_probs=136.4
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCc-eee-----ecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA-YFE-----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~-~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 482 (978)
..+.+|++++|.|.+.+.|.+.+.|+|++..+.... ++. .....|.|.+++.+|+|.|+|.|.|..|..+..+.
T Consensus 14 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 93 (197)
T 2j8h_A 14 LNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTAS 93 (197)
T ss_dssp EEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEE
T ss_pred cEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEE
Confidence 356799999999999999999999999999886532 211 11238999999999999999999999999889999
Q ss_pred EEEEeeceeeccC-----CcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE----ecCEEEEEe
Q psy12060 483 ISIQAEPNFTIPL-----TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI----QDNVLTIRY 553 (978)
Q Consensus 483 l~V~~~p~~~~~~-----~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~----~~~~l~i~~ 553 (978)
|.|..+|.+..+. ....+.+|+.++|.|.+.|.|.+.+.|+|++..+... .++.+ ....|.|.+
T Consensus 94 l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-------~~~~~~~~~~~~~L~i~~ 166 (197)
T 2j8h_A 94 LEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN-------GHYQVIVTRSFTSLVFPN 166 (197)
T ss_dssp EEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSS-------SSCEEEECSSEEEEECTT
T ss_pred EEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecC-------CCEEEEEcCCceEEEEeC
Confidence 9999888765432 3345788999999999999999999999999888632 22222 224788888
Q ss_pred -CCCCCCCeEEEEEEEcCCCceeeEEEEEEE
Q psy12060 554 -LNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583 (978)
Q Consensus 554 -~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 583 (978)
+.. +|+|.|+|.|.|..|.....+.|.|.
T Consensus 167 ~~~~-~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 167 GVER-KDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp CCCG-GGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCc-ccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 876 99999999999999998888887775
No 160
>3bdw_A Natural killer cells antigen CD94; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 3cdg_J 1b6e_A 3cii_G
Probab=99.86 E-value=4.5e-22 Score=177.09 Aligned_cols=119 Identities=24% Similarity=0.413 Sum_probs=104.0
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
|..||++|+.|+++||+++... ++|.+|+..|+.+||+||+|++++|++||..+ ...+||||.+...++.|.|
T Consensus 2 c~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~------~~~~WIGl~~~~~~~~w~W 74 (123)
T 3bdw_A 2 CCSCQEKWVGYRCNCYFISSEQ-KTWNESRHLCASQKSSLLQLQNTDELDFMSSS------QQFYWIGLSYSEEHTAWLW 74 (123)
T ss_dssp CCCCTTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCSCGGGGGGGTTC------CCCEECSEEEETTTTEEEE
T ss_pred CCCCCCCceEECCEEEEEeCCC-CCHHHHHHHHHHCCCeeEEECCHHHHHHHHhC------cCCEEeeeecCCCCCcEEe
Confidence 6789999999999999999995 99999999999999999999999999999764 4679999999988999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|..++|+ ..++|+.+.... .|.+..|.....|+|+.
T Consensus 75 ~dg~~~~~--~~w~~~~~~-~~~~C~~~~~~~-----~w~d~~C~~~~~fICe~ 120 (123)
T 3bdw_A 75 ENGSALSQ--YLFPSFETF-NTKNCIAYNPNG-----NALDESCEDKNRYICKQ 120 (123)
T ss_dssp TTSCBCCT--TTSGGGGGC-CTTSEEEEETTT-----EEEEECTTSCBEEEEEE
T ss_pred eCCCcCCc--ccccccCCC-CCCCCcEEcCCC-----cEEccCCCCCCeeeEeE
Confidence 99999875 346555443 468999886542 68999999999999997
No 161
>2bpd_A Dectin-1; receptor, beta-glucan, fungal recognition, C-type lectin-like domain, CTLD, carbohydrate; 1.5A {Mus musculus} PDB: 2bph_A 2bpe_A 2cl8_A*
Probab=99.86 E-value=2e-21 Score=177.69 Aligned_cols=124 Identities=22% Similarity=0.315 Sum_probs=105.3
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
...||.+|+.|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++... ....+||||.+...++.|.|
T Consensus 14 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~-~~~~~WIGl~~~~~~~~w~W 91 (142)
T 2bpd_A 14 SQSCLPNWIMHGKSCYLFSFSG-NSWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSH-RINAFWIGLSRNQSEGPWFW 91 (142)
T ss_dssp -CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHGGG-TTSEEEEEEECSSTTSCCEE
T ss_pred CCCCCccceecCCEEEEEECCC-CCHHHHHHHHHHcCCEEeeeCCHHHHHHHHHHHhcc-CCCCEEEEeecCCCCCCeEe
Confidence 4579999999999999999994 999999999999999999999999999999998654 34578999999888999999
Q ss_pred cCCCCCCcccccCCCC--CCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPE--PADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~--~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|..+ +++. ..++|+.+... .|.+..|.....|+|+.
T Consensus 92 ~dg~~~~~--~~w~~~~~~~~~~~~~~Cv~~~~~------~W~d~~C~~~~~fICe~ 140 (142)
T 2bpd_A 92 EDGSAFFP--NSFQVRNAVPQESLLHNCVWIHGS------EVYNQICNTSSYSICEK 140 (142)
T ss_dssp TTSCBCCS--SSCCEECCCCSCCSCCCEEEEETT------EEEEECTTSCEEEEEEE
T ss_pred CCCCcccc--ccccccCCCCCCCCCCCCcEEcCC------eEECcCCCCCceeeeee
Confidence 99999875 345432 3332 57899988532 68999999999999997
No 162
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.86 E-value=1e-20 Score=188.76 Aligned_cols=193 Identities=28% Similarity=0.515 Sum_probs=145.9
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEE-----EEeCCCCCCCe
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT-----IRYLNPERDPA 561 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~-----i~~~~~~~d~G 561 (978)
.+|.+...+....+.+|++++|.|.+.+.|.+.+.|++++..+....... ...+.....+.+. |.++.. .|+|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~-~d~G 85 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDP-RSHRMLLPSGSLFFLRIVHGRKSR-PDEG 85 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCT-TCSEEECTTSCEEESSCCCCSSCC-CSCE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeecccccc-ccceEEecCCcEEEEEEEecCCCc-ccCe
Confidence 46778888888889999999999999999999999999999886432110 1122333334343 344565 8999
Q ss_pred EEEEEEEcCCCce-eeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEee-ccCCCCeeEEeeCCEEecCCCcEEEee
Q psy12060 562 MYQCRAKNQLKTR-YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRRKIFE 639 (978)
Q Consensus 562 ~Y~C~a~n~~g~~-~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~~~~ 639 (978)
.|+|.+.|..|.. .....+.|...++.+...+ ....+..|+.++|.|.+ .+.|.+.+.|+++|..+..........
T Consensus 86 ~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~ 163 (212)
T 2v9r_A 86 VYVCVARNYLGEAVSHDASLEVAILRDDFRQNP--SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR 163 (212)
T ss_dssp EEEEEEEETTEEEECCCEEEEECEECSSCSBCC--CCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE
T ss_pred EEEEEEECCCCceeecceEEEEEeccccceeCC--CceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc
Confidence 9999999988765 3456777765555554433 34568899999999998 899999999999999998765555556
Q ss_pred cCcEEEccccCCCCEEEEEEEEeCCceeeee-EEEEEEeCCceee
Q psy12060 640 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYE 683 (978)
Q Consensus 640 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~p~~~~ 683 (978)
++.|.|.++..+|+|.|+|.|.|..|...+. +.|.|..+|.+..
T Consensus 164 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~ 208 (212)
T 2v9r_A 164 GGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVK 208 (212)
T ss_dssp TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred CCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhh
Confidence 7889999999999999999999999987664 8999988776543
No 163
>1sl6_A C-type lectin DC-signr; sugar binding protein; HET: GAL NDG FUC; 2.25A {Homo sapiens} SCOP: d.169.1.1 PDB: 1xar_A
Probab=99.86 E-value=2.2e-21 Score=185.18 Aligned_cols=127 Identities=21% Similarity=0.424 Sum_probs=110.7
Q ss_pred ccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEE
Q psy12060 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~ 104 (978)
.+..||.+|+.|+++||+|+... ++|.+|+.+|+.+||+||+|++++|++||..++.. ....+|||+.+...++.|.
T Consensus 49 ~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~--~~~~~WIGl~~~~~~~~w~ 125 (184)
T 1sl6_A 49 LCRHCPKDWTFFQGNCYFMSNSQ-RNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSR--SNRFSWMGLSDLNQEGTWQ 125 (184)
T ss_dssp TCCBCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHH--TTCCEEEEEECCSSTTCCE
T ss_pred cCCCCCCCcEEECCEEEEEECCC-CCHHHHHHHHHhcCCEEEEeCCHHHHHHHHHHhcc--CCccEEEEEEccCCCCCeE
Confidence 46689999999999999999984 99999999999999999999999999999987643 2457999999988899999
Q ss_pred EcCCCCCCc-ccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 105 NEDGTNLNE-LDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 105 w~dg~~~~~-~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|.||+++.+ ++..|.+++|++ ..++|+.+... .|.+..|.....|+|+..
T Consensus 126 W~DGs~~~~~~~~~W~~geP~~~~~~~Cv~~~~~------gW~d~~C~~~~~fICe~~ 177 (184)
T 1sl6_A 126 WVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGS------GWNDNRCDVDNYWICKKP 177 (184)
T ss_dssp ETTSCBCCGGGGGGBCTTCCCCTTSCCEEEEETT------EEEEECTTSCBEEEEEEE
T ss_pred ecCCCccCCcccCCCCCCCCCCCCCCCceEEeCC------cEEccCCCCCeeEEEeEC
Confidence 999999875 235688888877 57899998653 489999999999999984
No 164
>3c22_A C-type lectin domain family 4 member K; coiled coil, glycoprotein, membrane, signal-anchor, transmembrane, immune system, sugar binding protein; 1.50A {Homo sapiens} PDB: 3p5g_A* 3p5d_A* 3p5f_A* 3p5e_A* 3p5h_A* 3p5i_A* 3p7g_A* 3p7f_A* 3p7h_A* 3bc7_A* 3bbs_A* 3bc6_A*
Probab=99.86 E-value=2e-21 Score=181.05 Aligned_cols=127 Identities=20% Similarity=0.256 Sum_probs=108.1
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
...||.+|+.|+++||+|+.. +++|.+|+..|+.+||+||+|++++|++||.+++. ...+||||.+...++.|.|
T Consensus 20 ~~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~~~~~~w~W 94 (156)
T 3c22_A 20 LQVVSQGWKYFKGNFYYFSLI-PKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAG----GLIYWIGLTKAGMEGDWSW 94 (156)
T ss_dssp ----CCCCEEETTEEEEECSS-CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHT----TCCEEEEEEEETTTTEEEE
T ss_pred hccCCCCCEEcCCEEEEEECC-CCCHHHHHHHHHhCCCEEeecCCHHHHHHHHHhhc----CCcEEEeeeccCCCCceEe
Confidence 457999999999999999998 49999999999999999999999999999999873 3679999999988999999
Q ss_pred cCCCCCCcc--cccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 106 EDGTNLNEL--DAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 106 ~dg~~~~~~--~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.||+.+.+. +..|.+++|++ ..++|+.+.... ...|.+..|.....|+|+..
T Consensus 95 ~dG~~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~---~~~W~d~~C~~~~~fICe~~ 150 (156)
T 3c22_A 95 VDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPS---LQAWNDAPCDKTFLFICKRP 150 (156)
T ss_dssp TTCCCCCHHHHGGGBCTTCCCCGGGCCCEEEECSSS---SSCEEEECTTSCBEEEEEEE
T ss_pred CCCCccccccccCcCCCCCCCCCCCCCCceEECCCC---CCcEECCCCCCCeeEEEeeC
Confidence 999998752 35688888876 578999987653 23689999999999999983
No 165
>1oz7_B Echicetin B-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1
Probab=99.86 E-value=2.2e-21 Score=172.99 Aligned_cols=119 Identities=20% Similarity=0.364 Sum_probs=104.7
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
.||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++........+||||.+...++.|.|
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 79 (123)
T 1oz7_B 1 NCLPDWSVYEGYCYKVFKER-MNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPMLKNDLVWIGLTDYWRDCNWEW 79 (123)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCCSSHHHHHHHTSSTTTTCSEEEEEEECCCCGGGEEE
T ss_pred CCCCCcEEcCCEEEEEECCc-cCHHHHHHHHhccCCCcEECCcCCHHHHHHHHHHHHhcCCCCCEEEeeeeCCCCCCEEE
Confidence 49999999999999999995 999999999999 899999999999999999988554334679999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|. ++| +|+.+....+ .|.+..|.....|+|+.
T Consensus 80 ~dg~~~~~--~~W~-g~P-----~C~~~~~~~g----~w~~~~C~~~~~~ICe~ 121 (123)
T 1oz7_B 80 SDGAQLDY--KAWD-NER-----HCFIYKNTDN----QWTRRDCTWTFSFVCKC 121 (123)
T ss_dssp TTCCCCCS--CCBC-SST-----TEEEEEGGGT----EEEEECTTSCEEEEEEE
T ss_pred cCCCcccc--cCCC-CCC-----CeEEEECCCC----cEeCCCCCCCeeEEEeE
Confidence 99999864 4577 766 8999876543 78999999999999997
No 166
>1uv0_A Pancreatitis-associated protein 1; lectin, C-type, secreted, inflammatory response, acute phase; 1.78A {Homo sapiens} SCOP: d.169.1.1 PDB: 2go0_A
Probab=99.86 E-value=2.2e-21 Score=179.94 Aligned_cols=131 Identities=19% Similarity=0.274 Sum_probs=111.7
Q ss_pred cccccccccceeccCeeEEEEccCCCCHHHHHHHhhhc-CCeeeeeCChhhHHHHHHHhhccC-CCCceEEEEeecCCCc
Q psy12060 24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL-DSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPN 101 (978)
Q Consensus 24 ~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~-~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~~ 101 (978)
.....||.+|+.|+++||+|+.. +++|.+|+..|+.+ ||+||+|++++|++||..++.... ....+||||.+...++
T Consensus 9 ~~~~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WiGl~~~~~~~ 87 (149)
T 1uv0_A 9 SARIRCPKGSKAYGSHCYALFLS-PKSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSIGNSYSYVWIGLHDPTQGT 87 (149)
T ss_dssp -CCCCCCTTCEEETTEEEEEEEE-EECHHHHHHHHTTSTTCEECCCCSHHHHHHHHHHHTTSCTTCCEEEEEEECTTTTC
T ss_pred CCCCCCCccccccCCEEEEEECC-CCCHHHHHHHhhcCCCccEeEeCCHHHHHHHHHHHHhhccCCCCEEEeeEccCCCC
Confidence 34557999999999999999999 49999999999998 899999999999999999986532 2457999999988877
Q ss_pred c-----EEEcCCCCCCcccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 102 L-----WVNEDGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 102 ~-----w~w~dg~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
. |.|.||+++.+ ..|.+++|++ ..++|+.+....+ ...|.+..|.....|+|+.
T Consensus 88 ~~~~~~w~W~dg~~~~~--~~W~~~~P~~~~~~~Cv~~~~~~~--~~~W~d~~C~~~~~fICe~ 147 (149)
T 1uv0_A 88 EPNGEGWEWSSSDVMNY--FAWERNPSTISSPGHCASLSRSTA--FLRWKDYNCNVRLPYVCKF 147 (149)
T ss_dssp C--CCCCEETTCCCCCC--CCBSSCGGGSSSCCSEEEEEGGGT--TCSEEEECTTSCEEEEEEE
T ss_pred ccCCCccEECCCCccCc--cCcCCCCcCCCCCCCCEEEEcCCC--CCeEeCcCCCCCCceEEee
Confidence 6 99999999854 5688888876 6789999976643 2468999999999999997
No 167
>2xr6_A CD209 antigen; sugar binding protein, carbohydrate binding, mannose; HET: MAN 07B; 1.35A {Homo sapiens} PDB: 1sl4_A* 2it6_A* 1k9i_A* 2xr5_A* 1sl5_A* 2it5_A* 1xph_A 1k9j_A*
Probab=99.86 E-value=2e-21 Score=183.34 Aligned_cols=129 Identities=22% Similarity=0.412 Sum_probs=108.5
Q ss_pred ccccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCcc
Q psy12060 23 DELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL 102 (978)
Q Consensus 23 ~~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~ 102 (978)
...+..||.+|..|+++||+++... ++|.+|+..|+.+||+||+|++++|++||..++.. ....+||||.+...++.
T Consensus 16 ~~~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~--~~~~~WIGl~~~~~~~~ 92 (170)
T 2xr6_A 16 ERLSHPCPWEWTFFQGNCYFMSNSQ-RNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR--SNRFTWMGLSDLNQEGT 92 (170)
T ss_dssp -----CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHH--HTCCEEEEEEEEEETTE
T ss_pred ccccCCCCcCcEEeCCEEEEEECCc-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhcc--CCCCEEeccccCCCCCe
Confidence 4456789999999999999999994 99999999999999999999999999999987643 24578999999888999
Q ss_pred EEEcCCCCCCcc-cccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 103 WVNEDGTNLNEL-DAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 103 w~w~dg~~~~~~-~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|.|.||+.+.+. +..|..++|++ ..++|+.+... .|.+..|.....|+|+..
T Consensus 93 w~W~dG~~~~~~~~~~W~~geP~~~~~~~Cv~~~~~------gW~d~~C~~~~~fICe~~ 146 (170)
T 2xr6_A 93 WQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKCNLAKFWICKKS 146 (170)
T ss_dssp EEETTSCBCCGGGGGGBCTTCCCCTTCCCEEEEETT------EEEEECTTSCBEEEEEEE
T ss_pred EEeCCCCCcccccccCCCCCCCCCCCCCCCeEEeCC------cEEccccCCCccEEEEEC
Confidence 999999998742 35688888876 47899988653 489999999999999984
No 168
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.86 E-value=1.4e-21 Score=192.26 Aligned_cols=163 Identities=13% Similarity=0.176 Sum_probs=126.6
Q ss_pred CCCCCCCcEEEEEEEe-ecCCCeeEEEEcCccCCCCceee--e----cccEEEeCCCCCCCCeEEEEEEEeCCCceEEEE
Q psy12060 409 EAPKAGDKVRLECVAF-GYPVPSYNWTRRGSPLPRNAYFE--N----FNRILTIPNVKVEDQGEYICRASNDRSALESSV 481 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~l~~~~~~~--~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 481 (978)
..+.+|+.+.|.|.+. +.|.|+|+|+|||.+|..+.+.. . ....|.|.+++.+|+|.|+|.|.| |......
T Consensus 12 ~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~~ 89 (207)
T 3rbs_A 12 VEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNHS 89 (207)
T ss_dssp EEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEEE
T ss_pred eEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEEE
Confidence 4567999999999997 47999999999999997654322 1 123699999999999999999999 5555544
Q ss_pred EEEEE---------------------eeceeeccCCcccccCCCceeEEEEeecC-CCCeeEEeECCEECCCCCCCCCCC
Q psy12060 482 TISIQ---------------------AEPNFTIPLTDKHMDNQADLTWTCEAFGV-PDVTYSWFRNGELLNSETLPLEDQ 539 (978)
Q Consensus 482 ~l~V~---------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W~~~g~~~~~~~~~~~~~ 539 (978)
.+.+. .+|.+...+ ...+.+|+++.|.|.+.|. |.+.|+|+|||.++....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~------ 162 (207)
T 3rbs_A 90 TVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE------ 162 (207)
T ss_dssp EEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCC------
T ss_pred EEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCC------
Confidence 44321 146555444 3678899999999999998 999999999999986421
Q ss_pred CcEEEe--cCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEE
Q psy12060 540 DRYFIQ--DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582 (978)
Q Consensus 540 ~~~~~~--~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 582 (978)
++... ...|.|.++.. +|+|.|+|.|.|..|....++.|.+
T Consensus 163 -~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 163 -KHDFKDGICTLLITEFSK-KDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp -CCCCSSEEEEEEETTCCG-GGCEEEEEEEEETTEEEEEEEEECC
T ss_pred -ceEcCCCEEEEEECCCCc-ccCEEEEEEEEcCCCEEEEEEEEec
Confidence 22222 23699999997 9999999999999998888777653
No 169
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.86 E-value=8.5e-21 Score=189.32 Aligned_cols=192 Identities=24% Similarity=0.431 Sum_probs=140.3
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCC----C
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP----R 264 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~----~ 264 (978)
+|.|+..|.+..+.+ |++++|.|.+.|.|.+.+.|+|++..+..... .....+....++.+.+... +
T Consensus 9 pp~i~~~p~~~~v~~-----G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~i~~~ 79 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSK-----GEPATLNCKAEGRPTPTIEWYKGGERVETDKD----DPRSHRMLLPSGSLFFLRIVHGRK 79 (212)
T ss_dssp EEEEEECCCCEEECT-----TCCEEECCEEEEESCCEEEEEETTEECCCTTT----CTTCSEEECTTSCEEESSCCCCSS
T ss_pred CcceecCCCceEEeC-----CCcEEEEEEcCCCCCCEEEEEECCEEeecccc----ccccceEEecCCcEEEEEEEecCC
Confidence 588888888877644 56699999999999999999999976532110 0011223334555544322 2
Q ss_pred CCCCCeEEEEEEEeCceeEEeEEEEEEEeeecc-cccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccc
Q psy12060 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGE-FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (978)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~-~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 343 (978)
+.+|+|.|+|.|.|..|...+..+.|.|...+. +...+....+..|+.++|.|.+..+.|.+.|.|+|++..+... ..
T Consensus 80 ~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~-~~ 158 (212)
T 2v9r_A 80 SRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDK-DE 158 (212)
T ss_dssp CCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTT-ST
T ss_pred CcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCC-cc
Confidence 789999999999999998777788888876554 3334455678889999999998778899999999999875432 22
Q ss_pred eEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCC
Q psy12060 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN 393 (978)
Q Consensus 344 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~ 393 (978)
++ ...++.|.|.+++.+|+|.|+|.|.|..|.. .+..+.|.|..+|.
T Consensus 159 ~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~--~s~~~~l~V~~~P~ 205 (212)
T 2v9r_A 159 RI-TIRGGKLMITYTRKSDAGKYVCVGTNMVGER--ESEVAELTVLERPS 205 (212)
T ss_dssp TE-EEETTEEEESSCCGGGCEEEEEEEEETTEEE--ECCCEEEEEEC---
T ss_pred eE-EccCCeEEEeeCCHhhCeeEEEEEecccCce--ecceEEEEEEeCch
Confidence 33 3456789999999999999999999987643 23347888887664
No 170
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.86 E-value=8.6e-21 Score=185.19 Aligned_cols=167 Identities=20% Similarity=0.301 Sum_probs=132.3
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEE-cccccccccccccCCCCCCceEe-ec---ceEEEeCCCCC
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFK-EDYVQDRLVANLIDPLSDKRFTL-SG---GNLIINDPRQV 266 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~-~~---~~l~i~~~~~~ 266 (978)
|...|.+..+. +|+.++|.|.+.|.|. .+.|+| ++..+. ...++.. .+ .+|.|.++ +.
T Consensus 5 ~~~~~~~~~v~-----~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~----------~~~~~~~~~~~~~~~L~i~~~-~~ 67 (189)
T 2v44_A 5 VTISLSKVELS-----VGESKFFTCTAIGEPE-SIDWYNPQGEKII----------STQRVVVQKEGVRSRLTIYNA-NI 67 (189)
T ss_dssp EEESCSEEEEE-----TTCCEEEEEEEEECCS-EEEEECTTSCBCC----------CCSSEEEEEETTEEEEEECSC-CG
T ss_pred EEecCCceEEe-----cCCcEEEEEEeecCCe-eEEEEeCCCCccC----------CCceEEEECCCCeEEEEEccC-Cc
Confidence 45556666654 4566999999999987 999999 554432 1222222 12 38999997 89
Q ss_pred CCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEE
Q psy12060 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 346 (978)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 346 (978)
+|+|.|+|.|.|..|...+..+.|.|..++.+.....+..+..|+.++|.|.+ .+.|.+.++|+|++.++......++.
T Consensus 68 ~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~ 146 (189)
T 2v44_A 68 EDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFA 146 (189)
T ss_dssp GGCEEEEEEEECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEE-ECSSCCEEEEEEEC--CEECCCTTEE
T ss_pred ccCeEEEEEEEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEE-CcCCCCcEEEEECCcEEeccCCCCEE
Confidence 99999999999999887778888888887777666667788899999999998 58899999999999886655567777
Q ss_pred EeeCCcEEEeeeeeecceeeEEEEEeeccc
Q psy12060 347 VSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (978)
Q Consensus 347 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 376 (978)
...++.|.|.+++.+|+|.|+|.|.|..+.
T Consensus 147 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 176 (189)
T 2v44_A 147 MLANNNLQILNINKSDEGIYRCEGRVEARG 176 (189)
T ss_dssp ECTTSCEEETTCCGGGCEEEEEEEEETTTT
T ss_pred EecCCcEEEEEcCcccCeEEEEEEEccccC
Confidence 888889999999999999999999998753
No 171
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.86 E-value=1e-20 Score=189.33 Aligned_cols=185 Identities=30% Similarity=0.550 Sum_probs=146.7
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEE----EEEeCCCCCCCeE
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVL----TIRYLNPERDPAM 562 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l----~i~~~~~~~d~G~ 562 (978)
.+|.+...+....+.+|++++|.|.+.+.|.+.|.|+|+|..+..... ...++....+.+ .|.++.. +|+|.
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~---~~~~~~~~~~~~~~~l~i~~v~~-~d~G~ 83 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEK---KSHRVQFKDGALFFYRTMQGKKE-QDGGE 83 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSS---SSSEEECTTSCEEESSCCBSSSC-BCCEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCc---cceeEEecCCceEEEEEeccCCc-ccCce
Confidence 467888888888899999999999999999999999999998874311 123333444444 5677776 89999
Q ss_pred EEEEEEcCCCcee-eEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEee-ccCCCCeeEEeeCCEEec--------CC
Q psy12060 563 YQCRAKNQLKTRY-SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIG--------SG 632 (978)
Q Consensus 563 Y~C~a~n~~g~~~-~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~g~~~~--------~~ 632 (978)
|+|.+.|..|... ....+.|...+|.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|+++|..+. ..
T Consensus 84 Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~--~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~ 161 (217)
T 2vr9_A 84 YWCVAKNRVGQAVSRHASLQIAVLRDDFRVEP--KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGAS 161 (217)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECCSCSBCC--CCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CC
T ss_pred EEEEEecCCCccccccceEEEEEeCCCcEECC--CccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccC
Confidence 9999999887653 356677765566665544 34557899999999999 899999999999999887 34
Q ss_pred CcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEe
Q psy12060 633 GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677 (978)
Q Consensus 633 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 677 (978)
.+..+...++|.|.++..+|+|.|+|.|.|..|....+..+.+..
T Consensus 162 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 162 SRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp CSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 455566677899999999999999999999999998877666654
No 172
>2vuv_A Codakine; sugar-binding protein, C-type, lectin, mannose, invertebrate; HET: CIT; 1.3A {Codakia orbicularis} PDB: 2vuz_A*
Probab=99.86 E-value=2.4e-21 Score=174.31 Aligned_cols=121 Identities=20% Similarity=0.411 Sum_probs=106.1
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCce--EEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRK--WYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~--w~g~~~~~~~~~w~w 105 (978)
.||++|+.|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++........+ ||| +...++.|.|
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WiG--~~~~~~~~~W 77 (129)
T 2vuv_A 1 GCPDGWTQFLDLCYIYQSAK-ASWASAQSSCQALGGILAEPDTACENEVLIHMCKENGDAGSFGPWLG--GQKVGGAWQW 77 (129)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHTTCCSSSCCEEE--EEEETTEEEE
T ss_pred CCCcchhhhCCEEEEEECCC-cCHHHHHHHHHhcCCEECccCCHHHHHHHHHHHHhccCCCCcccccC--CCCCCCeEEE
Confidence 49999999999999999995 999999999999999999999999999999998665434567 999 6667899999
Q ss_pred cC-CCCCCcccccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 ED-GTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~d-g~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.| |+++.+ ..|.+++|++ +.++|+.+.... |.+..|.....|+|+.
T Consensus 78 ~d~g~~~~~--~~W~~~~P~~~~~~~~C~~~~~~~------w~~~~C~~~~~~ICe~ 126 (129)
T 2vuv_A 78 SSSGAAFDY--LRWGPNEPNNSGGNEDCLHYNWLS------WNDLRCHYQASYLCQR 126 (129)
T ss_dssp TTTCCBCSS--CCBCTTCSCCTTSCCCEEEEETTE------EEEECTTSCEEEEEEE
T ss_pred cCCCCcccc--CCcCCCCCCCCCCCCCccEEcCCc------ccCCCCCCCcceEeee
Confidence 99 999854 5688888876 378999987652 8999999999999997
No 173
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.86 E-value=3.5e-20 Score=180.89 Aligned_cols=176 Identities=22% Similarity=0.374 Sum_probs=140.3
Q ss_pred eeceeeccCCcccccC-CCceeEEEEeecCCC--CeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEE
Q psy12060 487 AEPNFTIPLTDKHMDN-QADLTWTCEAFGVPD--VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~-g~~~~l~C~~~~~p~--~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y 563 (978)
.+|.+..++. ..+.+ |++++|.|.+.+.|. +.+.|+|+|..+..... ...+..|.|.++.. +|+|.|
T Consensus 2 ~~P~i~~~~~-~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~--------~~~~~~L~i~~~~~-~d~G~Y 71 (190)
T 2wv3_A 2 NEPRIVTSEE-VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRK--------NASNMEYRINKPRA-EDSGEY 71 (190)
T ss_dssp -CCEEEECCC-EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCB--------CCSEEEEEESSCCG-GGCEEE
T ss_pred CCCcccccce-EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccce--------EeccEEEEEecCCc-ccCEEE
Confidence 3676666443 45555 999999999998876 89999999999874321 11446899999986 999999
Q ss_pred EEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEee--CCEEec---CCCcEEEe
Q psy12060 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNIIG---SGGRRKIF 638 (978)
Q Consensus 564 ~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~--~g~~~~---~~~~~~~~ 638 (978)
+|.+.|. +.......|.|.. +|.+...+ ....+..|+.+.|.|.+.|.|.|.+.|++ +|..+. ...++.+.
T Consensus 72 ~C~~~n~-~~~~~~~~l~V~~-~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~ 147 (190)
T 2wv3_A 72 HCVYHFV-SAPKANATIEVKA-APDITGHK--RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFII 147 (190)
T ss_dssp EEEEEET-TEEEEEEEEEEEC-CCEEEEEC--SEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEE
T ss_pred EEEEEeC-CcccccEEEEEec-CCcccccC--CcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEe
Confidence 9999999 7777788888874 66665443 34458899999999999999999999999 787764 44556555
Q ss_pred ecC---cEEEcccc-CCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 639 ENG---NLLISPVS-RDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 639 ~~~---~l~i~~~~-~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
.++ +|.|.++. .+|+|.|+|.|.|..|....++.|.|.
T Consensus 148 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 148 NKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp ECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 443 59999999 799999999999999999988888774
No 174
>2e3x_C Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=99.85 E-value=1.9e-21 Score=173.20 Aligned_cols=119 Identities=19% Similarity=0.280 Sum_probs=104.2
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
.||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++........+||||.+...++.|.|
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 80 (122)
T 2e3x_C 2 DCPSGWLSYEQHCYKGFNDL-KNWTDAEKFCTEQKKGSHLVSLHSREEEKFVVNLISENLEYPATWIGLGNMWKDCRMEW 80 (122)
T ss_dssp CCCSSCEEETTEEEEECCCC-BCHHHHHHHHHHHSTTCCBCCCSSHHHHHHHHHHHHHHCSSSEEEEEEESTTSSSCEEE
T ss_pred CCCcchhhhCCEeEEEECCC-cCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHHhcCCCCCEEEeeeecCCCCceEe
Confidence 59999999999999999994 999999999999 899999999999999999988654445679999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|. ++| +|+.+....+ .|.+..|.....|+|+.
T Consensus 81 ~dg~~~~~--~~W~-~~P-----~C~~~~~~~g----~w~~~~C~~~~~~ICe~ 122 (122)
T 2e3x_C 81 SDRGNVKY--KALA-EES-----YCLIMITHEK----VWKSMTCNFIAPVVCKF 122 (122)
T ss_dssp TTSCCCCC--CCBC-SCC-----EEEEEETTTC----CEEEEETTSCBCCEEC-
T ss_pred CCCCcccc--cccC-CCC-----CCEEEECCCC----cEeCCCCCCCCceeecC
Confidence 99999864 4577 766 8998876543 68999999999999973
No 175
>1fvu_B Botrocetin beta chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_C 1u0n_C 1u0o_B
Probab=99.85 E-value=1.3e-21 Score=175.17 Aligned_cols=121 Identities=18% Similarity=0.277 Sum_probs=104.0
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
.||++|..|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++........+||||.+...++.|.|
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 79 (125)
T 1fvu_B 1 DCPPDWSSYEGHCYRFFKEW-MHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEMLKGDVVWIGLSDVWNKCRFEW 79 (125)
T ss_dssp CCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHTTCTTSCTTCCEECSCCCCSTTSCEEE
T ss_pred CcCCccEEcCCEEEEEeCCC-CCHHHHHHHHhccCCCcEECccCCHHHHHHHHHHHHhcCCCCCEEEeeeecCCCCceEe
Confidence 49999999999999999995 999999999999 899999999999999999888554335679999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|.+++|+ +|+.+....+ .|.+..|.....|+|+.
T Consensus 80 ~dg~~~~~--~~w~~~~P~----~C~~~~~~~g----~w~~~~C~~~~~~iCe~ 123 (125)
T 1fvu_B 80 TDGMEFDY--DDYYLIAEY----ECVASKPTNN----KWWIIPCTRFKNFVCEF 123 (125)
T ss_dssp TTSCCCCC------CCSCC----EEEEEETTTT----EEEEEETTSCEEEEEEE
T ss_pred cCCCccCc--cccCCCCCC----CceEEECCCC----cEeCCcCCCCCcEEEee
Confidence 99999864 568888876 8998876543 78999999999999997
No 176
>1jzn_A Galactose-specific lectin; C-type lectin, protein-disaccharide complex, sugar binding P; HET: BGC GAL; 2.20A {Crotalus atrox} SCOP: d.169.1.1 PDB: 1muq_A*
Probab=99.85 E-value=3.2e-21 Score=175.57 Aligned_cols=127 Identities=17% Similarity=0.235 Sum_probs=109.6
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccC-CCCceEEEEeecCCCccEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~~~w~ 104 (978)
.||++|..|+++||+++... ++|.+|+..|+. .||+||+|++++|++||.+++.... ....+||||.+...++.|.
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~~~~~ 80 (135)
T 1jzn_A 2 NCPLDWLPMNGLCYKIFNQL-KTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHKGQENVWIGLRDKKKDFSWE 80 (135)
T ss_dssp CSCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSSSEEECCCCSHHHHHHHHHHHHHHCCSSCCEEEEEECTTSSSCCE
T ss_pred cCCCCceeeCCEEEEEECCc-cCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHHhcccCCCCEEEeeEcCCcCCceE
Confidence 69999999999999999995 999999999999 6999999999999999999885532 2457999999988899999
Q ss_pred EcCCCCCCcccccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 105 NEDGTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 105 w~dg~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|.||+++.+ ..|.+++|++ +.++|+.+....+ ...|.+..|.....|+|+.
T Consensus 81 W~dg~~~~~--~~W~~~~P~~~~~~~~C~~~~~~~~--~~~w~~~~C~~~~~~ICe~ 133 (135)
T 1jzn_A 81 WTDRSCTDY--LTWDKNQPDHYQNKEFCVELVSLTG--YRLWNDQVCESKDAFLCQC 133 (135)
T ss_dssp ETTCCCCCC--CCBCTTCCCCGGGCCCEEEECGGGT--TCSEEEECTTSCEEEEEEE
T ss_pred ECCCCccCc--CcCCcCCCCCCCCCCCceEEECCCC--CCcCCCcCCCCCCceeeee
Confidence 999999754 5688888876 3679999876543 1368999999999999997
No 177
>2h2t_B Low affinity immunoglobulin epsilon FC receptor ( IGE receptor) (FC-epsilon-RII)...; C-type lectin, calcium-bound, lectin domain; 1.30A {Homo sapiens} PDB: 2h2r_A 1t8c_A 1t8d_A
Probab=99.85 E-value=2.2e-21 Score=183.98 Aligned_cols=124 Identities=17% Similarity=0.416 Sum_probs=106.0
Q ss_pred ccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEE
Q psy12060 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~ 104 (978)
.+..||.+|..|+++||+|+... ++|.+|+.+|+.+||+||+|++++|++||.+++. ...+||||.+...++.|.
T Consensus 13 ~~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~----~~~~WIGl~~~~~~~~w~ 87 (175)
T 2h2t_B 13 VCNTCPEKWINFQRKCYYFGKGT-KQWVHARYACDDMEGQLVSIHSPEEQDFLTKRAS----HTGSWIGLRNLDLKGEFI 87 (175)
T ss_dssp -CCBCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHTTCC----TTCEEEEEEEETTTTEEE
T ss_pred cCCCCCcccEEeCCEEEEEeCCc-cCHHHHHHHHhhcCCEEeecCCHHHHHHHHHHhc----CCcEEecceecCCCCCeE
Confidence 35689999999999999999994 9999999999999999999999999999988773 357899999998899999
Q ss_pred EcCCCCCCcccccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcce-eeEEEec
Q psy12060 105 NEDGTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPL-LFICEAS 160 (978)
Q Consensus 105 w~dg~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~-~~~C~~~ 160 (978)
|.||+.+.+ ..|..++|++ ..++|+.+.... .|.+..|.... .|+|+..
T Consensus 88 W~dG~~~~y--~~W~~geP~~~~~~~~Cv~~~~~g-----~W~d~~C~~~~~~fICe~~ 139 (175)
T 2h2t_B 88 WVDGSHVDY--SNWAPGEPTSRSQSEDCVMMRGSG-----RWNDAFCDRKLGAWVCDRL 139 (175)
T ss_dssp ETTSCCCSS--CCBCTTCCCC-----CEEEECTTS-----CEEEECTTCCEEEEEEEEE
T ss_pred eCCCCcccC--cCcCCCCCCCCCCCCCceEEcCCC-----cEEECCCCCcCcceEEeEC
Confidence 999999864 5688888876 467999886421 68999999998 9999983
No 178
>3bx4_A Aggretin alpha chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_A
Probab=99.85 E-value=2.1e-21 Score=176.67 Aligned_cols=124 Identities=16% Similarity=0.265 Sum_probs=107.3
Q ss_pred ccccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCC---CceEEEEe--ecCC
Q psy12060 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQ---RRKWYFGG--TQQS 99 (978)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~---~~~w~g~~--~~~~ 99 (978)
..||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++...... ..+||||. +...
T Consensus 3 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~WIGl~~~~~~~ 81 (136)
T 3bx4_A 3 EDCDFGWSPYDQHCYQAFNEQ-KTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDELADEDYVWIGLRAQNKEQ 81 (136)
T ss_dssp -CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTSTTTCEECCCCSHHHHHHHHHHHHTCGGGTTCCEEEEEEEECCCSS
T ss_pred CCCCCCCEecCCEEEEEECCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhhcccCccCCEEEeeeccCCCC
Confidence 469999999999999999984 999999999999 899999999999999999998654333 67999999 8778
Q ss_pred CccEEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 100 PNLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 100 ~~~w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
++.|.|.||+++.+ ..|.+++|+ +|+.+..... ...|.+..|.....|+|+.
T Consensus 82 ~~~~~W~dg~~~~~--~~W~~~~P~----~C~~~~~~~~--~~~W~~~~C~~~~~fICe~ 133 (136)
T 3bx4_A 82 QCSSEWSDGSSVSY--ENLIDLHTK----KCGALEKLTG--FRKWVNYYCEQMHAFVCKL 133 (136)
T ss_dssp SSCCBCTTSCBCCC--CCCTTCCCC----CEEEEEGGGT--TTSEEEECTTSCEEEEEEE
T ss_pred CCceEeCCCCccCc--ccccCCCCC----ccEEEEecCC--CCeEeCCCCCCCcceEEee
Confidence 99999999999864 568888876 8999876643 1368999999999999997
No 179
>1mpu_A NKG2-D type II integral membrane protein; C-type lectin-like domain, immune system; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 1hyr_B
Probab=99.85 E-value=1e-21 Score=178.51 Aligned_cols=118 Identities=20% Similarity=0.389 Sum_probs=104.2
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
+..||.+|..|+++||+++... ++|.+|+.+|+.+||+||+|++++|++||..+ ...+||||.+...++.|.|
T Consensus 18 ~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~fl~~~------~~~~WIGl~~~~~~~~w~W 90 (138)
T 1mpu_A 18 CGPCPKNWICYKNNCYQFFDES-KNWYESQASCMSQNASLLKVYSKEDQDLLKLV------KSYHWMGLVHIPTNGSWQW 90 (138)
T ss_dssp CCCCCTTCEECSSCEEEEEEEE-ECHHHHHHHHHHTSCEECCCCCTTTCGGGGGC------CSEEEEEEEECTTTCCEEE
T ss_pred cCCCChhheEeCCEEEEEECCC-CCHHHHHHHHHhcCCEEeeeCCHHHHHHHHhc------cCCEeEeeeccCCCCceEe
Confidence 5579999999999999999995 99999999999999999999999999999743 2578999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|.+++|+ .++|+.+.... .|.+..|.....|+|+.
T Consensus 91 ~dG~~~~~--~~w~~~~p~--~~~C~~~~~~~-----~w~~~~C~~~~~fICe~ 135 (138)
T 1mpu_A 91 EDGSILSP--NLLTIIEMQ--KGDCALYASSF-----KGYIENCSTPNTYICMQ 135 (138)
T ss_dssp TTSCBCCT--TSCEEECSS--CCSEEEEETTT-----EEEEECTTSCEEEEEEE
T ss_pred CCCCcCCc--cccccCCCC--CCCCeEEECCC-----cEEccCCCCCCeEcccC
Confidence 99999864 568777776 57999986542 67999999999999997
No 180
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.85 E-value=1.3e-20 Score=184.91 Aligned_cols=185 Identities=16% Similarity=0.204 Sum_probs=138.7
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEee-cCCCCeEEEEEccccccccc--ccccCCCCCC-ceEeecceEEEeCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAG-GYPNPSYEWFKEDYVQDRLV--ANLIDPLSDK-RFTLSGGNLIINDPR 264 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~l~i~~~~ 264 (978)
+|.|+..|.+..+.. |++++|.|.+. |.|.+.+.|+|+|..+.... ...+....+. .....+++|.|.++
T Consensus 2 ~~~~~~~p~~~~v~~-----G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~- 75 (195)
T 2c5d_C 2 ESPFVGNPGNITGAR-----GLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSL- 75 (195)
T ss_dssp CCSEEECCCCEEECT-----TCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSC-
T ss_pred CCeeccChhheEEec-----CCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEec-
Confidence 578889998888654 55699999999 99999999999998764321 1111110000 01111468999997
Q ss_pred CCCCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccccccccccc
Q psy12060 265 QVEDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEEDK 343 (978)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~~~~ 343 (978)
+.+|+|.|+|.|.|..|...+..+.|.|..+|.+...+....+..|+.++|.|.+ .|.|.+ .|.|+|++.++......
T Consensus 76 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~~~~ 154 (195)
T 2c5d_C 76 QLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQA-QGPPEPVDLLWLQDAVPLATAPGH 154 (195)
T ss_dssp CSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEE-ECSSCCCEEEEEESSCBSSSSTTS
T ss_pred cccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeEC-CCCCCCCEEEEEECCEeccCCCCc
Confidence 8999999999999999887777789999888776666666778889999999998 677888 99999999875433221
Q ss_pred eEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEE
Q psy12060 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (978)
Q Consensus 344 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V 388 (978)
..++.|.|.+++ |+|.|+|.|.|..|... +..+.|.|
T Consensus 155 ----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~--s~~~~l~V 191 (195)
T 2c5d_C 155 ----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTT--SRTATITV 191 (195)
T ss_dssp ----SCCEEEEECCCS--SCEEEEEEEEETTEEEE--CCCEEEEE
T ss_pred ----CCCCeEEEcccc--cCceEEEEEEcCCCceE--EEEEEEEE
Confidence 445679999987 89999999999876432 23477777
No 181
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.85 E-value=4.1e-21 Score=187.65 Aligned_cols=181 Identities=20% Similarity=0.314 Sum_probs=137.3
Q ss_pred ccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeeccccc
Q psy12060 299 NLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTG 378 (978)
Q Consensus 299 ~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~ 378 (978)
...+.+..+.+|+.++|.|.+ .+.|.+.+.|+|++..+......++.+..+++|.|.+++.+|+|.|+|.+.+..+...
T Consensus 6 ~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 84 (189)
T 2v5t_A 6 REVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEI 84 (189)
T ss_dssp EECCSSEEEETTSCEEECCEE-ECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEE
T ss_pred eccCCCEEEeCCCcEEEEEEE-cCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCce
Confidence 344566788899999999998 5678899999999987665566777788888999999999999999999998764322
Q ss_pred ccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCcee--eecccEEEeC
Q psy12060 379 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF--ENFNRILTIP 456 (978)
Q Consensus 379 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~--~~~~~~L~i~ 456 (978)
. ...+.|.|..+|..... . ......+.+|+.++|.|.+.|.|.+.|.|++++..+...... ...+..|.|.
T Consensus 85 ~-~~~~~l~v~~~p~~~~~---~---~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~ 157 (189)
T 2v5t_A 85 D-FRDIIVIVNVPPAISMP---Q---KSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVR 157 (189)
T ss_dssp E-EEEEEEEEEEEEEEECS---C---CEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEEC
T ss_pred E-EEEEEEEecCCCCcccc---c---ccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEc
Confidence 1 12355666655432211 1 011235678999999999999999999999999998766543 2345789999
Q ss_pred CCCCCCCeEEEEEEEeCCCceEEEEEEEEEe
Q psy12060 457 NVKVEDQGEYICRASNDRSALESSVTISIQA 487 (978)
Q Consensus 457 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 487 (978)
++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 158 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 158 NIINSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCChhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 9999999999999999999998888888753
No 182
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=99.85 E-value=3.3e-21 Score=184.82 Aligned_cols=127 Identities=20% Similarity=0.282 Sum_probs=109.7
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
...||+||+.|+++||+|+... ++|.+|+.+|+.+||+||+|++++|++||.+++. ...+|||+.+...++.|.|
T Consensus 46 ~~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~~~~~~w~W 120 (182)
T 3kqg_A 46 LQVVSQGWKYFKGNFYYFSLIP-KTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAG----GLIYWIGLTKAGMEGDWSW 120 (182)
T ss_dssp HHHHTTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHT----TCCEEEEEEECSTTCCEEE
T ss_pred hccCCCCCEEeCCEEEEEECCC-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhcC----CCcEEEEeEccCCCCceEe
Confidence 3469999999999999999994 9999999999999999999999999999998873 2479999999988999999
Q ss_pred cCCCCCCcc--cccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 106 EDGTNLNEL--DAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 106 ~dg~~~~~~--~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.||+++... +..|.+++|++ ..++|+.+.... ...|.+..|.....|+|+..
T Consensus 121 ~dG~~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~---~~~W~d~~C~~~~~fICe~~ 176 (182)
T 3kqg_A 121 VDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPS---LQAWNDAPCDKTFLFICKRP 176 (182)
T ss_dssp TTCCCCCHHHHTTTBCTTCCCCTTSCCCEEEECSSS---SSCEEEECTTSCBEEEEEEE
T ss_pred CCCCccccccccCCCCCCCCCCCCCCCCeeEEecCC---CCCEeCcCCCCCeeEEeccC
Confidence 999998631 35688888876 357999987643 23689999999999999983
No 183
>2yhf_A C-type lectin domain family 5 member A; immune system; 1.90A {Homo sapiens}
Probab=99.85 E-value=2.4e-21 Score=171.01 Aligned_cols=116 Identities=18% Similarity=0.302 Sum_probs=101.6
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.||++|+.|+++||+++... ++|.+|+..|+.+||+||+|++++|++||.+++. ...+||||.+...++.|.|.|
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~~~~~~w~W~d 75 (118)
T 2yhf_A 1 MCPKDWEFYQARCFFLSTSE-SSWNESRDFCKGKGSTLAIVNTPEKLKFLQDITD----AEKYFIGLIYHREEKRWRWIN 75 (118)
T ss_dssp CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHC----SSCEEEEEEEETTTTEEEETT
T ss_pred CCCCCcEEeCCEEEEEeCCC-CCHHHHHHHHhhcCCEEEEeCCHHHHHHHHHhhC----CCcEEEeccccCCCCcEEEeC
Confidence 49999999999999999994 9999999999999999999999999999998873 357999999998899999999
Q ss_pred CCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 108 GTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|+++. .|..++|+ .++|+.+.... .|.+..|.....|+|+.
T Consensus 76 g~~~~----~~~~~~~~--~~~C~~~~~~~-----~w~~~~C~~~~~fICe~ 116 (118)
T 2yhf_A 76 NSVFN----GNVTNQNQ--NFNCATIGLTK-----TFDAASCDISYRRICEK 116 (118)
T ss_dssp TEECC----SCEESCCT--TCCEEEESSSS-----SEEEECTTSCBEEEEEE
T ss_pred CCcCC----CCccCCCC--CCCeeEEcCCC-----cCccccCCCCceeeecc
Confidence 99864 35555554 47999986542 58999999999999996
No 184
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.85 E-value=6.7e-21 Score=187.57 Aligned_cols=177 Identities=18% Similarity=0.185 Sum_probs=130.3
Q ss_pred CCCceEEEEee--CCeeEEEeecCCCCCCCceeEEEEEeeccc-cCceEecccccceeeeecCCceeeEEeeccCCCcee
Q psy12060 780 LPGGVQVVEVH--KTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856 (978)
Q Consensus 780 ~P~~~~~~~~~--~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y 856 (978)
+|.++++..++ .+++.|+|.+| .+++|.+|.|+|+.... ..|..... ......+++.+ |.|++.|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~i~~-L~p~t~Y 69 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSVGRWKEATI---------PGHLNSYTIKG-LKPGVVY 69 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECC--SSTTCCEEEEEEEETTCSSCCEEEEE---------CTTCCEEEECS-CCTTEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCC--CCCCceEEEEEEEECCCCCceEEEec---------CCCccEEEecC-CCCCCEE
Confidence 67888888877 99999999998 46789999999997544 45554321 12456889999 9999999
Q ss_pred EEEEEEecCCccCCCCC-------CC--CCCCCCCCCCCCCC----CceeecccccCcEEEEEEeCCCCCCCCCcceEEE
Q psy12060 857 EFKVIAGNELGYGEPSS-------PS--PQYNTPADKPYQAP----SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 923 (978)
Q Consensus 857 ~~~v~A~N~~G~g~~s~-------~~--~~~~t~~~~P~~~P----~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i 923 (978)
.|+|.|.|..|.|+++. .. ....+....|..+| .++.+...+.++|.|+|++| ++.|.+|+|
T Consensus 70 ~~~V~a~n~~G~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v 144 (201)
T 2ha1_A 70 EGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA-----SDTVSGFRV 144 (201)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS-----CTTEEEEEE
T ss_pred EEEEEEEecccccCceeEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC-----CCCccEEEE
Confidence 99999999999987521 11 01122212232222 67888888999999999984 468999999
Q ss_pred EEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCC
Q psy12060 924 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976 (978)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S 976 (978)
+|+..+...|.... ....+. ..+.|.+|.|++.|.|+|+|+|.+|.|+++
T Consensus 145 ~~~~~~~~~~~~~~-~v~~~~--~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~ 194 (201)
T 2ha1_A 145 EYELSEEGDEPQYL-DLPSTA--TSVNIPDLLPGRKYIVNVYQISEDGEQSLI 194 (201)
T ss_dssp EEEETTTCCCCEEE-EEETTC--CEEEECSCCTTCEEEEEEEEEETTSCEEEE
T ss_pred EEEECCCCCceeEE-EcCCce--eEEEeCCCCCCCEEEEEEEEEcCCCCcccE
Confidence 99976544443221 122222 347799999999999999999999999875
No 185
>3ubu_A Agglucetin subunit alpha-1; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}
Probab=99.85 E-value=3.2e-21 Score=174.45 Aligned_cols=124 Identities=19% Similarity=0.317 Sum_probs=107.6
Q ss_pred ccccccceeccCeeEEEEccCCCCHHHHHHHhhhc--CCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCC--Ccc
Q psy12060 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQS--PNL 102 (978)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~--~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~--~~~ 102 (978)
..||++|+.|+++||+++... ++|.+|+.+|+.+ ||+||+|++++|++||..++........+||||.+... ++.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~G~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~ 80 (131)
T 3ubu_A 2 VDCLPGWSAYDQSCYRVFKLL-KTWDDAEKFCTERPKGGHLVSIESAGERDFVAQLVSENKQTDNVWLGLKIQSKGQQCS 80 (131)
T ss_dssp CCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHTSTTCCEECCCCSHHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSSC
T ss_pred cCCCccCEecCCEeeEEcCCC-cCHHHHHHHHhccCCCceEceeCCHHHHHHHHHHHHhcCCCCCEEEeEecCCCCCCCc
Confidence 369999999999999999994 9999999999998 89999999999999999998765444589999999977 899
Q ss_pred EEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 103 WVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 103 w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|.|.||+++.+ ..|.+++| ++|+.+....+ ...|.+..|.....|+|+.
T Consensus 81 ~~W~dg~~~~~--~~w~~~~~----~~Cv~~~~~~~--~~~W~~~~C~~~~~fiCe~ 129 (131)
T 3ubu_A 81 TEWTDGSSVSY--ENFSEYQS----KKCFVLEKNTG--FRTWLNLNCGSEYSFVCKS 129 (131)
T ss_dssp CBCTTSCBCCC--CCBCTTTC----CCEEEECGGGT--SCSEEEECTTCCEEEEEEE
T ss_pred eEeCCCCccce--eccCCCCC----CCcEEEeCCCC--CCeEcCCCCCCCceeEEec
Confidence 99999999864 45777654 78999876543 3368999999999999997
No 186
>1ukm_B EMS16 B chain, EMS16 subunit B; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_B*
Probab=99.85 E-value=4.6e-21 Score=172.33 Aligned_cols=121 Identities=17% Similarity=0.280 Sum_probs=105.3
Q ss_pred ccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEc
Q psy12060 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (978)
Q Consensus 29 Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~ 106 (978)
||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++........+||||.+...++.|.|.
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WiGl~~~~~~~~~~W~ 79 (128)
T 1ukm_B 1 CPLGWSSFDQHCYKVFEPV-KNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKALKFTSMWIGLNNPWKDCKWEWS 79 (128)
T ss_dssp CCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCSSCEEEEEEECTTTTCCEEET
T ss_pred CCCcCEecCCEeEEEECCc-cCHHHHHHHHhccCCccEEcccCCHHHHHHHHHHHHhcCCcCcEEEecccCCCCCceEeC
Confidence 9999999999999999984 999999999999 8999999999999999999886543356799999998889999999
Q ss_pred CCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 107 DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 107 dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
||+++.+ ..|. ++| +|+.+..... ...|.+..|.....|+|+..
T Consensus 80 dg~~~~~--~~W~-g~P-----~C~~~~~~~~--~~~w~~~~C~~~~~fICe~~ 123 (128)
T 1ukm_B 80 DNARFDY--KAWK-RRP-----YCTVMVVKPD--RIFWFTRGCEKSVSFVCKFL 123 (128)
T ss_dssp TCCCCCC--CCBC-CCC-----EEEEEEECSS--CEEEEEEETTSCEEEEEEEE
T ss_pred CCCcccc--CCCC-CCC-----CcEEEeCCCC--CCeEeCCCCCCCcCeEeeec
Confidence 9999854 4577 766 8998876532 23789999999999999983
No 187
>3ff9_A Killer cell lectin-like receptor subfamily G member 1; natural killer cell receptor KLTG1, glycoprotein, membrane, phosphoprotein, signal-anchor; 1.80A {Mus musculus} SCOP: d.169.1.0 PDB: 3ff8_C
Probab=99.85 E-value=3.3e-21 Score=168.92 Aligned_cols=112 Identities=21% Similarity=0.297 Sum_probs=98.0
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.||++|..|+++||+|+... ++|.+|+..|+++||+||+|++++|++||..++. ...+||||.+ ++.|.|.|
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~---~~~w~W~d 72 (115)
T 3ff9_A 1 MCPILWTRNGSHCYYFSMEK-KDWNSSLKFCADKGSHLLTFPDNQGVKLFGEYLG----QDFYWIGLRN---IDGWRWEG 72 (115)
T ss_dssp CCCTTCEEETTEEEEECSSC-BCHHHHHHHHHHTTCEECCCTTSCCHHHHHTTCC----SSCEEEEEEE---SSSEEETT
T ss_pred CCCccceecCCEEEEEEcCC-cCHHHHHHHHHhcCCeeeeeCCHHHHHHHHHhhC----CCcEEEeeee---CCceEeCC
Confidence 49999999999999999994 9999999999999999999999999999988773 3578999997 57899999
Q ss_pred CCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 108 GTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|+++.+ . | +|++..++|+.+... .|.+..|.....|+|+.
T Consensus 73 g~~~~~--~-~---~p~~~~~~C~~~~~~------~w~~~~C~~~~~fICe~ 112 (115)
T 3ff9_A 73 GPALSL--R-I---LTNSLIQRCGAIHRN------GLQASSCEVALQWICKK 112 (115)
T ss_dssp SCBCCS--C-C---BCSSTTCCEEEEETT------EEEEECTTSCBEEEEEE
T ss_pred CCcccc--c-c---cCCCCCCCCeEEcCC------CcccccCCCCCceEEEE
Confidence 999865 2 2 345567899998753 48999999999999997
No 188
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.85 E-value=1.7e-20 Score=183.06 Aligned_cols=167 Identities=22% Similarity=0.437 Sum_probs=134.7
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEE-cCccCCCCceeee----cccEEEeCCCCCCCCeEEEEEEEeCCCce-EEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTR-RGSPLPRNAYFEN----FNRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTI 483 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~-~~~~l~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l 483 (978)
.+.+|++++|.|.+.+.|. .+.|++ ++..+....+... ....|.|.+++.+|+|.|+|.+.|..|.. +..+.|
T Consensus 13 ~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l 91 (189)
T 2v44_A 13 ELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVL 91 (189)
T ss_dssp EEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEE
Confidence 4579999999999999887 999999 7777765544321 23589999999999999999999998876 678899
Q ss_pred EEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE-ecCEEEEEeCCCCCCCeE
Q psy12060 484 SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAM 562 (978)
Q Consensus 484 ~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~d~G~ 562 (978)
.|..+|.+...+.+..+.+|+.++|.|.+.|.|.+.+.|+|++..+... ...++.. .++.|.|.++.. +|+|.
T Consensus 92 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~-----~~~~~~~~~~~~L~i~~v~~-~d~G~ 165 (189)
T 2v44_A 92 EIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTI-----SDNRFAMLANNNLQILNINK-SDEGI 165 (189)
T ss_dssp EEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEEC-----CCTTEEECTTSCEEETTCCG-GGCEE
T ss_pred EEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEecc-----CCCCEEEecCCcEEEEEcCc-ccCeE
Confidence 9999998887777778999999999999999999999999999877521 2233333 456899999986 99999
Q ss_pred EEEEEEcCCCceeeEEEEEEE
Q psy12060 563 YQCRAKNQLKTRYSSAQLRVL 583 (978)
Q Consensus 563 Y~C~a~n~~g~~~~~~~l~v~ 583 (978)
|+|.|.|..+.......+.|.
T Consensus 166 Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 166 YRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp EEEEEEETTTTEEEEEEEEEE
T ss_pred EEEEEEccccCceeeeeEEEE
Confidence 999999998877665555543
No 189
>1egg_A Macrophage mannose receptor; C-type lectin, sugar binding protein; 2.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1egi_A
Probab=99.85 E-value=3e-21 Score=178.70 Aligned_cols=128 Identities=16% Similarity=0.277 Sum_probs=106.5
Q ss_pred ccccccc--eeccCeeEEEEc----cCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCC-CCceEEEEeecCC
Q psy12060 27 LRCPQHW--VQYRDSCYRFVK----SPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP-QRRKWYFGGTQQS 99 (978)
Q Consensus 27 ~~Cp~~w--~~~~~~Cy~~~~----~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~-~~~~w~g~~~~~~ 99 (978)
..||.+| ..|+++||+|+. . +++|.+|+.+|+.+||+||+|++++|++||.+++..... ...+||||.+...
T Consensus 3 ~~Cp~gw~~~~~~~~CY~~~~~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~ 81 (147)
T 1egg_A 3 PKCPEDWGASSRTSLCFKLYAKGKHE-KKTWFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKLFWLGLTYGSP 81 (147)
T ss_dssp --CCTTCEECSSSSCEEEEECSCGGG-CBCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHHHTCTTCEEEEEEECC--
T ss_pred CCCCCCCccccCCCEEEEEeccCCcc-ccCHHHHHHHHHHcCCEECccCCHHHHHHHHHHHHhccCCCCcEEEeeecCCC
Confidence 4699999 999999999999 7 599999999999999999999999999999998865432 4679999999888
Q ss_pred CccEEEcCCCCCCcccccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 100 PNLWVNEDGTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 100 ~~~w~w~dg~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
++.|.|.||+++.+ ..|.+++|++ ..++|+.+....+ ..|.+..|.....|+|+..
T Consensus 82 ~~~w~W~dg~~~~~--~~W~~g~P~~~~~~~~Cv~~~~~~~---~~W~d~~C~~~~~fICe~~ 139 (147)
T 1egg_A 82 SEGFTWSDGSPVSY--ENWAYGEPNNYQNVEYCGELKGDPT---MSWNDINCEHLNNWICQIQ 139 (147)
T ss_dssp --CCCCTTSCCCCC--CCCCTTCSCGGGSCCEEEEEECSTT---CCEEEEETTSCBEEEEECC
T ss_pred CCcEEecCCCCccc--CccCCCCCCCCCCCCCCeEECCCCC---CceeccCCCCCccEEeeCC
Confidence 89999999999864 5688888876 4689999976532 3789999999999999983
No 190
>1umr_C Convulxin beta, CVX beta; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_B
Probab=99.85 E-value=2.8e-21 Score=172.90 Aligned_cols=119 Identities=21% Similarity=0.360 Sum_probs=104.9
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
.||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++........+||||.+...++.|.|
T Consensus 3 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 81 (125)
T 1umr_C 3 CCPSHWSSYDRYCYKVFKQE-MTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSLKSTFFWIGANNIWNKCNWQW 81 (125)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHTTCSSSEEECSCCCTTTSSCEEE
T ss_pred CCCCCCEEcCCEeEEEECCC-cCHHHHHHHHhccCCcceECccCCHHHHHHHHHHHHhcCCCCCEEEeeEeCCCCCeeEe
Confidence 69999999999999999995 999999999999 899999999999999999988654334679999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|. ++| +|+.+....+ .|.+..|.....|+|+.
T Consensus 82 ~dg~~~~~--~~W~-g~P-----~C~~~~~~~g----~w~~~~C~~~~~fICe~ 123 (125)
T 1umr_C 82 SDGTKPEY--KEWH-EEF-----ECLISRTFDN----QWLSAPCSDTYSFVCKF 123 (125)
T ss_dssp TTSCCCSS--CCBC-CCC-----EEEEEESSCS----CEEEEETTSCEEEEEEE
T ss_pred CCcCccCc--ccCC-CCC-----CcEEEECCCC----cEeCCCCCCCcceEEee
Confidence 99999864 4577 766 8998876543 68999999999999997
No 191
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.85 E-value=2.2e-20 Score=184.50 Aligned_cols=184 Identities=32% Similarity=0.554 Sum_probs=139.1
Q ss_pred CCCeeeecccCeEEEeCCCCCCCC-ceEEEecccccccccccceE-EEeeCCcEEEeeeeeecceeeEEEEEeecccccc
Q psy12060 302 RAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVEEDKRV-FVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGR 379 (978)
Q Consensus 302 ~~~~~~~~~~~~~l~C~~~~~~p~-~~i~W~~~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~ 379 (978)
.....+.+|+.++|.|.+..+.|. +.+.|+|++.++......+. ....+++|.|.+++.+|+|.|+|.+.|..+....
T Consensus 15 ~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 94 (201)
T 3s97_C 15 RPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 94 (201)
T ss_dssp CCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEE
T ss_pred CceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcch
Confidence 456678899999999994477888 99999999988654444443 3345678999999999999999999997654444
Q ss_pred cCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCC
Q psy12060 380 NGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVK 459 (978)
Q Consensus 380 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~ 459 (978)
....+.+.+........ ..|..........+.+|+.++|.|.+.|.|.+.|.|++++..+.........+..|.|.++.
T Consensus 95 ~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~ 173 (201)
T 3s97_C 95 FSKFIPLIPIPERTTKP-YPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQ 173 (201)
T ss_dssp ECCCEEEEEECCSSCCC-EEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSCC
T ss_pred hhcccceeeccccccCC-CCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccCC
Confidence 33445555443211000 00000000012456799999999999999999999999999988776666677899999999
Q ss_pred CCCCeEEEEEEEeCCCceEEEEEEEEE
Q psy12060 460 VEDQGEYICRASNDRSALESSVTISIQ 486 (978)
Q Consensus 460 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 486 (978)
.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 174 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 174 LEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred hhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 999999999999999999999998886
No 192
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.85 E-value=5.6e-20 Score=180.01 Aligned_cols=170 Identities=24% Similarity=0.439 Sum_probs=138.9
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCcee--eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF--ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 486 (978)
..+.+|++++|.|.+.|.|.+.+.|++++..+....+. ...+..|.|.+++.+|+|.|+|.+.+..|.....+.|.|.
T Consensus 14 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 93 (192)
T 2va4_A 14 ATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 93 (192)
T ss_dssp EETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEE
Confidence 35679999999999999999999999999998766543 2345689999999999999999999999988889999999
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeEC--CEECCCCCCCCCCCCcEEEe----cCEEEEEeCCCCCCC
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRN--GELLNSETLPLEDQDRYFIQ----DNVLTIRYLNPERDP 560 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--g~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~ 560 (978)
.+|.+...+. ..+.+|+.++|.|.+.+.|.+.+.|+++ +..+...... ...++... ...|.|.++.. +|+
T Consensus 94 ~~p~~~~~~~-~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~-~d~ 169 (192)
T 2va4_A 94 VQPHIIQLKN-ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKS--LDGRIEVKGQHGSSSLHIKDVKL-SDS 169 (192)
T ss_dssp EEEEEEEECC-EEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBC--TTSCEEEEEETTEEEEEEESCCG-GGC
T ss_pred ccCcccccCc-ceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccc--cCCcEEEeeccCceEEEEecCCc-ccC
Confidence 9998765443 4567899999999999999999999998 6666532211 12333332 24799999986 999
Q ss_pred eEEEEEEEcCCCceeeEEEEEE
Q psy12060 561 AMYQCRAKNQLKTRYSSAQLRV 582 (978)
Q Consensus 561 G~Y~C~a~n~~g~~~~~~~l~v 582 (978)
|.|+|.|.|..|....+..|.|
T Consensus 170 G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 170 GRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEEEEecCCceEEEEEEEe
Confidence 9999999999998877777765
No 193
>1sb2_A Rhodocetin alpha subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_A
Probab=99.85 E-value=5.4e-21 Score=173.46 Aligned_cols=124 Identities=19% Similarity=0.306 Sum_probs=107.7
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCC--CCceEEEEe--ecCCCc
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP--QRRKWYFGG--TQQSPN 101 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~--~~~~w~g~~--~~~~~~ 101 (978)
.||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++..... ...+||||. +...++
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 79 (133)
T 1sb2_A 1 DCPDGWSSTKSYCYRPFKEK-KTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFENKIYRSWIGLKIENKGQRS 79 (133)
T ss_dssp CCCTTCEECSSEEEEEEEEE-ECHHHHHHHHHTSSSCCEECCCSSHHHHHHHHHHHHHHTTTCCEEEEEEEEEECSSTTS
T ss_pred CcCCCcEEcCCEeEEEECCc-CCHHHHHHHHhhhCCCcEEeeECCHHHHHHHHHHHHhhccCccCCEEEeeeccCCCCCC
Confidence 49999999999999999994 999999999999 89999999999999999999865443 467999999 877799
Q ss_pred cEEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 102 LWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 102 ~w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.|.|.||+++.+ ..|.+ +| .++|+.+...... ..|.+..|.....|+|+..
T Consensus 80 ~~~W~dg~~~~~--~~W~~-~P---~~~C~~~~~~~~~--~~w~~~~C~~~~~fICe~~ 130 (133)
T 1sb2_A 80 NLEWSDGSSISY--ENLYE-PY---MEKCFLMDHQSGL--PKWHTADCEEKNVFMCKFQ 130 (133)
T ss_dssp SEEETTCCCCCC--CCBSS-CC---CEEEEEEEESSSS--CEEEEECTTSCEEEEEEEE
T ss_pred ceEECCCCcccc--cccCc-CC---CCCcEEEEecCCC--CeEccCCCCCCceeEeccc
Confidence 999999999864 45777 66 6799999776431 3789999999999999974
No 194
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.85 E-value=2e-20 Score=182.64 Aligned_cols=182 Identities=22% Similarity=0.419 Sum_probs=140.9
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE-ecCEEEEEeCCCCCCCeEEEEE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCR 566 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~d~G~Y~C~ 566 (978)
+|.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+... ...++.. .++.|.|.++.. +|+|.|+|.
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~ 75 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTI-----SDNRFAMLANNNLQILNINK-SDEGIYRCE 75 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBC-----CCTTEEECTTSCEEETTCCG-GGCEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceec-----cCCeEEEecCCCEEEeeCCH-hHCcEEEEE
Confidence 466777778888999999999999999899999999998877532 2233333 456899999986 999999999
Q ss_pred EEcCCCceee--EEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEee-cCcE
Q psy12060 567 AKNQLKTRYS--SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNL 643 (978)
Q Consensus 567 a~n~~g~~~~--~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~-~~~l 643 (978)
+.+..+.... ...+.+.. +|.+...+......+..|+.+.|.|.+.+.|.+.+.|+++|..+....+..+.. .++|
T Consensus 76 ~~~~~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L 154 (189)
T 2v5t_A 76 GRVEARGEIDFRDIIVIVNV-PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTEL 154 (189)
T ss_dssp EEETTTTEEEEEEEEEEEEE-EEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEE
T ss_pred EEEcCCCceEEEEEEEEecC-CCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEE
Confidence 9998765443 33444443 455544433335567889999999999999999999999999998777766544 4569
Q ss_pred EEccccCCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 644 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 644 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 155 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 155 TVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 999999999999999999999999988888775
No 195
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.85 E-value=1.4e-20 Score=186.50 Aligned_cols=189 Identities=20% Similarity=0.230 Sum_probs=143.1
Q ss_pred CCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCce
Q psy12060 776 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 855 (978)
Q Consensus 776 ~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~ 855 (978)
.||++|.++++......+++++|+++.+.+.+ ..|.|+|+..+...|..+...... ....-.+.+.+ |.+++.
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~~~-~~Y~l~y~~~~~~~~~~c~~~~~~-----~~~~c~~~~~~-l~~~~~ 74 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGGLP-TNYSLTYHREGETLMHECPDYITG-----GPNSCHFGKQY-TSMWRT 74 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCSSSCCC-SEEEEEEEETTCCCCEECSCSSTT-----CTTEEEECGGG-CCSSSC
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCCCCCCC-ceEEEEEEECCCCccccCCCCCCC-----CCeEEEeCCCC-ccccee
Confidence 58999999999888899999999998876654 789999998776778766432211 00112233456 999999
Q ss_pred eEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccc----cCcEEEEEEeCCCCCC-CC-CcceEEEEEEecC
Q psy12060 856 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK----IGDLSISWEPLPREKQ-NA-PNIYYKIFWRKKN 929 (978)
Q Consensus 856 Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~----~~si~v~W~~p~~~~~-~g-~i~~Y~i~~~~~~ 929 (978)
|.|+|.|.|..|.+..+. . .+.+...+++.+|.++.+.... .++|.|+|++|..... +| .+.+|.|+|+..+
T Consensus 75 Y~~~V~A~N~~G~~~s~~-~-~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~ 152 (210)
T 3n06_B 75 YIMMVNATNQMGSSFSDE-L-YVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEK 152 (210)
T ss_dssp EEEEEEEEETTEEEECCC-E-EECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTT
T ss_pred EEEEEEEEcCCCCeeCCc-E-EEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCC
Confidence 999999999999985433 2 4555556677899999987653 5799999999654432 34 5799999999987
Q ss_pred CccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCC-CCCCCC
Q psy12060 930 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP-GPESEV 978 (978)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~-gp~S~~ 978 (978)
...|..... ... ..+.|.+|.|++.|.|+|+|.|..|. |++|++
T Consensus 153 ~~~~~~~~~---~~~--~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~ 197 (210)
T 3n06_B 153 AAEWEIHFA---GQQ--TEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPA 197 (210)
T ss_dssp CSSCEEEEE---ETC--SEEEECCCCTTCEEEEEEEEEESSSCCCCCCCC
T ss_pred CCCCEEEec---cCc--eEEEEeccCCCCEEEEEEEEecCCCcccCCCCc
Confidence 777765321 112 34679999999999999999999998 998864
No 196
>1fvu_A Botrocetin alpha chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_B 1u0n_B 1u0o_A
Probab=99.85 E-value=2.9e-21 Score=175.09 Aligned_cols=124 Identities=15% Similarity=0.264 Sum_probs=107.8
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChh-hHHHHHHHhhccCC--CCceEEEEe--ecCCC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDAD-EHGFIMYQLFWQDP--QRRKWYFGG--TQQSP 100 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~-e~~~i~~~~~~~~~--~~~~w~g~~--~~~~~ 100 (978)
.||+||+.|+++||+++... ++|.+|+..|+. .||+||+|++++ |++||.+++..... ...+||||. +...+
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~ 79 (133)
T 1fvu_A 1 DCPSGWSSYEGNCYKFFQQK-MNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNIQSSDLYAWIGLRVENKEKQ 79 (133)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCTTSTHHHHHHHHHHHHCCSSCCEEEEEEEECCSSSS
T ss_pred CcCCCcEEcCCeeEEEECCC-cCHHHHHHHHhccCCCcEEeeecChHHHHHHHHHHHhhccccCCCCEEEeeecccCCCC
Confidence 49999999999999999994 999999999999 799999999999 99999999865443 467999999 88789
Q ss_pred ccEEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 101 NLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 101 ~~w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
+.|.|.||+++.+ ..|.+ +|+ ++|+.+..... ...|.+..|.....|+|+..
T Consensus 80 ~~w~W~dg~~~~~--~~W~~-~P~---~~C~~~~~~~~--~~~w~~~~C~~~~~fICe~~ 131 (133)
T 1fvu_A 80 CSSEWSDGSSVSY--ENVVE-RTV---KKCFALEKDLG--FVLWINLYCAQKNPFVCKSP 131 (133)
T ss_dssp SCCBCTTSCBCCC--CCBCG-GGC---CCEEEEETTTT--SCSEEEECTTCCEEEEEEEC
T ss_pred CccEeCCCCcccc--cCccc-CCC---CCcEEEEecCC--CCeEecCCCCCCCCEEeeec
Confidence 9999999999864 45777 776 89999976643 13689999999999999973
No 197
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.85 E-value=2.5e-20 Score=182.93 Aligned_cols=175 Identities=19% Similarity=0.313 Sum_probs=139.9
Q ss_pred eceeeccCCcccccCCCceeEEEEee-cCCCCeeEEeECCEECCCCCCCCCCCCcEEEe-----------cCEEEEEeCC
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-----------DNVLTIRYLN 555 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~-----------~~~l~i~~~~ 555 (978)
+|.|...+.+..+.+|++++|.|.+. +.|.+.+.|+|+|..+... ...++.+. ...|.|.++.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 76 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELA-----DSTQTQVPLGEDEQDDWIVVSQLRITSLQ 76 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSC-----EEEEEEEECSSSTTSEEEEEEEEEESSCC
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccC-----CCCceEEEEccccccceeeccEEEEEecc
Confidence 57788888888999999999999999 8999999999999998743 11122211 3589999999
Q ss_pred CCCCCeEEEEEEEcCCCceeeE-EEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCC-eeEEeeCCEEecCCC
Q psy12060 556 PERDPAMYQCRAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGG 633 (978)
Q Consensus 556 ~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~g~~~~~~~ 633 (978)
. +|+|.|+|.+.|..+..... ..|.|. .+|.+...+ ....+.+|+.+.|.|.+.|.|.| .+.|++++..+....
T Consensus 77 ~-~d~G~Y~C~~~~~~~~~~~~~~~l~V~-~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~ 152 (195)
T 2c5d_C 77 L-SDTGQYQCLVFLGHQTFVSQPGYVGLE-GLPYFLEEP--EDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAP 152 (195)
T ss_dssp S-TTCEEEEEEEEETTEEEECCCEEEEEC-CSCEEEECC--CCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSST
T ss_pred c-cCCcEEEEEEEeCCCceecccEEEEEe-cCCeEEcCC--CcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCC
Confidence 6 99999999999987765433 667665 356665544 33567899999999999999999 999999999887654
Q ss_pred cEEEeecCcEEEccccCCCCEEEEEEEEeCCceee-eeEEEEE
Q psy12060 634 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE-SKGRLIV 675 (978)
Q Consensus 634 ~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v 675 (978)
.. ...+.|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 153 ~~--~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 153 GH--GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp TS--SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred Cc--CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 32 345679999987 78999999999999986 6788887
No 198
>3ubu_B Agglucetin subunit beta-2; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}
Probab=99.85 E-value=5.4e-21 Score=171.57 Aligned_cols=120 Identities=22% Similarity=0.316 Sum_probs=105.7
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
.||++|..|+++||+++.. +++|.+|+..|+. +||+||+|++++|++||..++........+||||.+...++.|.|
T Consensus 3 ~Cp~gw~~~~~~CY~~~~~-~~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 81 (126)
T 3ubu_B 3 CCPLRWSAYEGHCYLVVKE-KKTWDDAEKFCTEQRKGGHLVSVHSREEADFLVHLAYPILDLSLIWMGLSNMWNDCKREW 81 (126)
T ss_dssp SCCTTCEEETTEEEEEEEE-EECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHHCSCEEEEEEECTTTSSEEEE
T ss_pred CCCCCCeEcCCEeEEEeCC-CCCHHHHHHHHhccCCCcEECccCCHHHHHHHHHHHhhccCCCcEEEeEEcCCCCCceEe
Confidence 6999999999999999999 4999999999999 999999999999999999998654344589999999988999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|.+ .++|+.+..... ..|.+..|.....|+|+.
T Consensus 82 ~dg~~~~~--~~W~~------~~~Cv~~~~~~~---~~W~~~~C~~~~~fICe~ 124 (126)
T 3ubu_B 82 SDGTKLDF--KSWAK------TSDCLIGKTDGD---NQWLNMDCSKKHYFVCKF 124 (126)
T ss_dssp TTCCCCCC--CCBCC------CCCEEEEESSTT---CCEEEECTTSCEEEEEEE
T ss_pred cCCCeeee--eccCC------CCCeEEEecCCC---CcCcCCCCCCCceeEEee
Confidence 99999864 45655 579999976653 368999999999999997
No 199
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.85 E-value=1.9e-21 Score=189.94 Aligned_cols=168 Identities=14% Similarity=0.155 Sum_probs=118.3
Q ss_pred cccCcEEEEEE---eecCCCCeEEEEEcccccccccc-------cccCCCCCCceEe----ecceEEEeCCCCCCCCeEE
Q psy12060 207 SILNDITLSCY---AGGYPNPSYEWFKEDYVQDRLVA-------NLIDPLSDKRFTL----SGGNLIINDPRQVEDRGSY 272 (978)
Q Consensus 207 ~~g~~~~l~C~---~~g~p~~~v~W~~~~~~~~~~~~-------~~~~~~~~~~~~~----~~~~l~i~~~~~~~d~G~Y 272 (978)
.+|++++|+|. +.|.|.+.|+|||+|..+..... .........++.. ...+|.|.++ +.+|+|.|
T Consensus 6 ~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v-~~~D~G~Y 84 (203)
T 4fa8_A 6 FLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAA-NISHDGNY 84 (203)
T ss_dssp ETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSC-CGGGCEEE
T ss_pred EcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccC-CHHHCeEE
Confidence 35888999995 56899999999999865432110 0001111122221 2347999998 89999999
Q ss_pred EEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEeccccccc--ccccceEEEeeC
Q psy12060 273 HCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNF--VEEDKRVFVSYD 350 (978)
Q Consensus 273 ~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~--~~~~~~~~~~~~ 350 (978)
+|.|.|..|.. +..+.|.|..++.+...+....+.+|+.++|.|.+ .|.|.|.|+|++++..+. .....++.+..+
T Consensus 85 ~C~a~n~~g~~-~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~-~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~ 162 (203)
T 4fa8_A 85 LCRMKLGETEV-TKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTV-NAFPHPHVQWLMPEGVEPAPTAANGGVMKEKD 162 (203)
T ss_dssp EEEEEETTEEE-EEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEE-EEESCCEEEECCC------------CCEECTT
T ss_pred EEEEEcCCCcE-EEEEEEEecCCceeeecceeEEEcCCCEEEEEEEc-CCCCCCEEEEEECCeeecCcccccceEEEeCC
Confidence 99999999875 45678888777665555455566788999999998 688999999998765432 233456777788
Q ss_pred CcEEE---eeeeeecceeeEEEEEeecccc
Q psy12060 351 GALYF---SALEQIDAGNYSCNVQSKVSDT 377 (978)
Q Consensus 351 ~~L~i---~~~~~~d~G~Y~C~~~n~~~~~ 377 (978)
|+|.| .++..+|+|.|+|.|.|..|..
T Consensus 163 g~l~il~i~~v~~~D~G~YtC~A~N~~G~a 192 (203)
T 4fa8_A 163 GSLSVAVDLSLPKPWHLPVTCVGKNDKEEA 192 (203)
T ss_dssp SCEEEEEEEEECSSCCCCEEEEEESSSCEE
T ss_pred CCEEEEEECCCCHHHCEEEEEEEEcCCCEE
Confidence 87655 5889999999999999998754
No 200
>1ukm_A EMS16 A chain, EMS16 subunit A; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_A*
Probab=99.85 E-value=4.5e-21 Score=174.26 Aligned_cols=124 Identities=15% Similarity=0.278 Sum_probs=107.2
Q ss_pred ccccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCC-CC-ceEEEEeec--CCC
Q psy12060 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGGTQ--QSP 100 (978)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~~~--~~~ 100 (978)
..||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++..... .. .+||||.+. ..+
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~ 80 (134)
T 1ukm_A 2 FDCPSDWTAYDQHCYLAIGEP-QNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSGFMHRSEIYVWIGLRDRREEQQ 80 (134)
T ss_dssp -CCSTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHTGGGGGSSCCEEEEEEEECCSSSC
T ss_pred cCCCCccEecCCEEEEEECCC-cCHHHHHHHHhhcCCCcEECccCCHHHHHHHHHHHhhhccCCCCCEEEeeecCCCCCC
Confidence 369999999999999999984 999999999999 89999999999999999998855422 25 799999998 778
Q ss_pred ccEEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 101 NLWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 101 ~~w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
+.|.|.||+++.+ ..|.+++|+ +|+.+..... ...|.+..|.....|+|+.
T Consensus 81 ~~~~W~dg~~~~~--~~W~~g~P~----~C~~~~~~~~--~~~W~~~~C~~~~~~ICe~ 131 (134)
T 1ukm_A 81 CNPEWNDGSKIIY--VNWKEGESK----MCQGLTKWTN--FHDWNNINCEDLYPFVCKF 131 (134)
T ss_dssp SCCBCTTSCBCCC--CCBCTTCCC----CEEEEEGGGT--SCSEEEECTTSCEEEEEEE
T ss_pred CceEEcCcCcccc--ceECCCcCc----cceEEEecCC--CCeeecCCCCCCceeEEeE
Confidence 9999999999864 568888876 8999876643 1368999999999999997
No 201
>1j34_B Coagulation factor IX-binding protein B chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_B 1ixx_B* 1j35_B* 1x2t_B* 1x2w_B 1wt9_B 1iod_B 1y17_B
Probab=99.85 E-value=2.3e-21 Score=172.89 Aligned_cols=119 Identities=19% Similarity=0.362 Sum_probs=104.1
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
.||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++........+||||.+...++.|.|
T Consensus 1 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 79 (123)
T 1j34_B 1 DCPSDWSSYEGHCYKPFSEP-KNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFGHSIFWMGLSNVWNQCNWQW 79 (123)
T ss_dssp CCCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHHCSCEEECSCCSCSTTSCEEE
T ss_pred CcCCcccccCCEEEEEECCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhcCCCCCEEEeeEcCCCCCeeEe
Confidence 49999999999999999995 999999999999 899999999999999999988553334679999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|. ++| +|+.+....+ .|.+..|.....|+|+.
T Consensus 80 ~dg~~~~~--~~W~-g~P-----~C~~~~~~~g----~w~~~~C~~~~~~iCe~ 121 (123)
T 1j34_B 80 SNAAMLRY--KAWA-EES-----YCVYFKSTNN----KWRSRACRMMAQFVCEF 121 (123)
T ss_dssp TTCCCCCC--CCBS-CSC-----EEEEEETTSC----CBEEEETTSCEEEEEEE
T ss_pred CCCCCcCc--cCcC-CCC-----CcEEEECCCC----CCcCCCCCCCCcEEEee
Confidence 99999754 4577 766 8998876543 67999999999999997
No 202
>2afp_A Protein (SEA raven type II antifreeze protein); recombinant SEA raven protein, solution backbone fold, C- type lectin; NMR {Hemitripterus americanus} SCOP: d.169.1.1
Probab=99.85 E-value=4.9e-22 Score=179.00 Aligned_cols=124 Identities=20% Similarity=0.379 Sum_probs=108.7
Q ss_pred ccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEE
Q psy12060 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~ 104 (978)
.+..||.+|+.|+++||+++... ++|.+|+..|+.+||+||+|++++|++||.++ ....+||||.+...++.|.
T Consensus 3 ~~~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~-----~~~~~WIGl~~~~~~~~~~ 76 (129)
T 2afp_A 3 AGPNCPAGWQPLGDRCIYYETTA-MTWALAETNCMKLGGHLASIHSQEEHSFIQTL-----NAGVVWIGGSACLQAGAWT 76 (129)
T ss_dssp CCCSSCSSSCCCSSSEECCCCSC-CCHHHHHHHHHHHSCEECCCSSSHHHHHHHHH-----CSSCBCCSCBCSSSSSCCB
T ss_pred ccCCCCcCcEEcCCEEEEEECCc-CCHHHHHHHHHHcCCEECCcCCHHHHHHHHhc-----CCCCEEEcccccCCCCceE
Confidence 35679999999999999999995 99999999999999999999999999999888 3467899999988899999
Q ss_pred EcCCCCCCcccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 105 NEDGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 105 w~dg~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|.||+++.+ ..|.+++|++ ..++|+.+....+. .|.+..|.....|+|+.
T Consensus 77 W~dg~~~~~--~~W~~~~P~~~~~~~C~~~~~~~~~---~w~~~~C~~~~~~iCe~ 127 (129)
T 2afp_A 77 WSDGTPMNF--RSWCSTKPDDVLAACCMQMTAAADQ---CWDDLPCPASHKSVCAM 127 (129)
T ss_dssp SSSSCCCCC--CCSSSCCSCCSTTCCBCCBCCSSSS---CBCCBCSCCCCCCCEEE
T ss_pred eCCCCcccc--CCcCCCccCCCCCCCCeEEccCCCC---EEeCCCCCCCcceEEee
Confidence 999999854 5688888876 34899988766432 58999999999999997
No 203
>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A {Brachyopsis rostratus}
Probab=99.85 E-value=7.5e-21 Score=171.21 Aligned_cols=123 Identities=18% Similarity=0.342 Sum_probs=108.6
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
...++.+|..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++. ..+||||.+...++.|.|
T Consensus 7 ~~~~~~~~~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WIGl~~~~~~~~w~W 80 (133)
T 2zib_A 7 ALVCPAGWTLHGQRCFYSEATA-MTWDLAEANCVNKGGHLASIHSLEEQLYIKDIVA-----GIVWIGGSACKVAGAWSW 80 (133)
T ss_dssp CCCCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHCS-----SCEEEEEECCSSTTCCEE
T ss_pred eeeCCCCEEEeCCEEEEEECCc-cCHHHHHHHHHHCCCEECccCCHHHHHHHHHhhc-----cCEEEccEecCCCCceEE
Confidence 4578999999999999999995 9999999999999999999999999999999874 678999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|.+++|++ .+++|+.+....+. .|.+..|.....|+|+.
T Consensus 81 ~dG~~~~y--~~W~~g~P~~~~~~~Cv~~~~~~~~---~W~d~~C~~~~~fICe~ 130 (133)
T 2zib_A 81 TDGTPVDY--RTWCPTKPNDILSDCCMQMTAAVDK---CWDDLPCPASHASICAK 130 (133)
T ss_dssp TTCCCCCC--CCBCTTCCCCCTTSCEEEECSSTTC---CEEEECTTCCEEEEEEE
T ss_pred CCCCCccc--CCcCCCCCCCCCCCCceEEecCCCC---cEeCCCCCCCeeEEEeE
Confidence 99999854 5688888876 34799998766432 58999999999999997
No 204
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.85 E-value=1e-19 Score=178.12 Aligned_cols=186 Identities=22% Similarity=0.400 Sum_probs=146.5
Q ss_pred CCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeec-CcEEEccccCCCCEEEEEEEEeCC
Q psy12060 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVH 664 (978)
Q Consensus 586 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~-~~l~i~~~~~~d~G~Y~C~a~n~~ 664 (978)
+|.+...+.+....+.+|+.++|.|.+.+.|.+.+.|++++..+....++.+... ..|.|.+++.+|+|.|+|.+.|..
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKA 81 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccc
Confidence 4666655555566788999999999999999999999999999988777666543 459999999999999999999999
Q ss_pred ceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeC--CEEccccccccccCCeee--cCCc
Q psy12060 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIGNMDLNELETPNIN--IDGG 740 (978)
Q Consensus 665 g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~--g~~~~~~~~~~~~~~~~~--~~~~ 740 (978)
|.......|.|..+|.+... ....+..|+.+.|.|.+.+.|.+. +.|+++ +..+.............. ....
T Consensus 82 ~~~~~~~~l~V~~~p~~~~~--~~~~~~~g~~v~l~C~~~~~p~~~--v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (192)
T 2va4_A 82 GEDEKQAFLQVFVQPHIIQL--KNETTYENGQVTLVCDAEGEPIPE--ITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSS 157 (192)
T ss_dssp EEEEEEEEEEEEEEEEEEEE--CCEEECTTSEEEEEEEEEEESCCE--EEEEETTTTEEECTTCBCTTSCEEEEEETTEE
T ss_pred cccceEEEEEEEccCccccc--CcceEEeCCeEEEEEEecCCCCCc--EEEEeCCCCceeeccccccCCcEEEeeccCce
Confidence 99888888999887765543 345667899999999999988764 689998 665543221111111111 1235
Q ss_pred eEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEc
Q psy12060 741 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775 (978)
Q Consensus 741 ~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~ 775 (978)
.|.|.++..+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 158 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 158 SLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 89999999999999999999999999999888874
No 205
>1fm5_A Early activation antigen CD69; C-type lectin-like domain, natural killer cell receptor, lectin, C-type lectin, immune system; 2.27A {Homo sapiens} SCOP: d.169.1.1
Probab=99.85 E-value=4.9e-21 Score=184.77 Aligned_cols=117 Identities=15% Similarity=0.343 Sum_probs=99.4
Q ss_pred cccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccE
Q psy12060 24 ELELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW 103 (978)
Q Consensus 24 ~~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w 103 (978)
.....||++|..|+++||+|+.. +++|.+|+.+|+.+||+|++|++++|++||.+++. ...+|||+.+.. ++.|
T Consensus 80 ~~~~~Cp~gW~~~~~~CY~~~~~-~~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~----~~~~WIGl~~~~-~~~w 153 (199)
T 1fm5_A 80 SHVSSCSEDWVGYQRKCYFISTV-KRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAG----REEHWVGLKKEP-GHPW 153 (199)
T ss_dssp C----CCTTSEEETTEEEEECSS-CBCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHC----SSCEEEEEECCT-TSCC
T ss_pred CCCCCCCCCcEEECCEEEEEeCC-ccCHHHHHHHHhhcCCEEEecCCHHHHHHHHHhhC----CCCEEeeeEECC-CCCe
Confidence 34667999999999999999998 49999999999999999999999999999999884 257999999987 9999
Q ss_pred EEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 104 VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 104 ~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.|.||+++. .|. +....++|+.+... .|.+..|.....|+|+.
T Consensus 154 ~W~DGs~~~----~W~---~~~~~~~Cv~l~~~------~W~d~~C~~~~~fICe~ 196 (199)
T 1fm5_A 154 KWSNGKEFN----NWF---NVTGSDKCVFLKNT------EVSSMECEKNLYWICNK 196 (199)
T ss_dssp EETTSCBCC----CSS---CCCSSSSEEEECSS------CEEEECTTSCBEEEEEE
T ss_pred EECCCCccc----ccc---CCCCCCCceEEECC------CEEEecCCCCEEEEccc
Confidence 999999753 355 33457899998652 68999999999999997
No 206
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.85 E-value=2.7e-20 Score=180.75 Aligned_cols=174 Identities=11% Similarity=0.145 Sum_probs=131.7
Q ss_pred EcCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCC
Q psy12060 774 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853 (978)
Q Consensus 774 v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~ 853 (978)
+..+|.+|.++++...+.+++.|+|.+|. +++.+|.|+|+... ..+.... .......+++.+ |.|+
T Consensus 3 ~~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~-~~~~~~~---------~~~~~~~~~i~~-L~p~ 68 (186)
T 1qr4_A 3 AGTDLDNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPS-GKKNEME---------IPVDSTSFILRG-LDAG 68 (186)
T ss_dssp -----CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTT-CCEEEEE---------ECTTCSEEEEES-CCSS
T ss_pred ccCCCcCCCceEEEecCCCEEEEEEeCCC---CCccEEEEEEEeCC-CCeeEEE---------CCCCCCEEEECC-CCCC
Confidence 45679999999999999999999999984 37899999998542 2222211 112456789999 9999
Q ss_pred ceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccc
Q psy12060 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933 (978)
Q Consensus 854 ~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~ 933 (978)
+.|.|+|+|.|..|.+.+... .+.|. +.+|.++.+...+.++|.|+|++|. |.|.+|+|+|+..+...+
T Consensus 69 t~Y~~~V~a~~~~~~s~~~~~--~~~t~----p~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~~ 137 (186)
T 1qr4_A 69 TEYTISLVAEKGRHKSKPTTI--KGSTV----VGSPKGISFSDITENSATVSWTPPR-----SRVDSYRVSYVPITGGTP 137 (186)
T ss_dssp CEEEEEEEEESSSCBCCCEEE--EEECC----CCCCSCEEEESCCSSCEEEEECCCS-----SCCSEEEEEEEETTCCCC
T ss_pred CEEEEEEEEEcCCccCCCEEE--EEECC----CCCCCccEEEEeCCCEEEEEEECCC-----CcccEEEEEEEeCCCCCc
Confidence 999999999998887765432 34443 4678899999999999999999842 679999999998775444
Q ss_pred eeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCC
Q psy12060 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976 (978)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S 976 (978)
....+.. +. ..+.|.+|.|++.|.|+|+|.|..|.|++.
T Consensus 138 ~~~~~~~--~~--~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 176 (186)
T 1qr4_A 138 NVVTVDG--SK--TRTKLVKLVPGVDYNVNIISVKGFEESEPI 176 (186)
T ss_dssp EEEEEET--TC--CEEEECSCCSSCEEEEEEEEEETTEECCCE
T ss_pred eEEEcCC--Cc--CEEEEcCCCCCCEEEEEEEEEcCCCcCcCE
Confidence 4433322 22 347799999999999999999999999875
No 207
>1c3a_B Flavocetin-A: beta subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_B
Probab=99.85 E-value=3.2e-21 Score=172.51 Aligned_cols=119 Identities=18% Similarity=0.306 Sum_probs=104.2
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVN 105 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w 105 (978)
.||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++........+||||.+...++.|.|
T Consensus 3 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W 81 (125)
T 1c3a_B 3 CCPLGWSSYDEHCYQVFQQK-MNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPILKYDFVWIGLSNVWNECTKEW 81 (125)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCSSHHHHHHHHHHHHHHHCSCEEECSCCCTTTSSCEEE
T ss_pred CCCCcceecCCEEEEEECCC-CCHHHHHHHhhccCCCcEECccCCHHHHHHHHHHHHhcCCCCCEEEeeEcCCCCCceEe
Confidence 69999999999999999994 999999999999 899999999999999999988553235679999999888999999
Q ss_pred cCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 106 EDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 106 ~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.||+++.+ ..|. ++| +|+.+....+ .|.+..|.....|+|+.
T Consensus 82 ~dg~~~~~--~~w~-~~P-----~C~~~~~~~g----~w~~~~C~~~~~fiCe~ 123 (125)
T 1c3a_B 82 SDGTKLDY--KAWS-GGS-----DCIVSKTTDN----QWLSMDCSSKYYVVCKF 123 (125)
T ss_dssp TTCCCCCS--CCBC-CCC-----EEEEEESSSS----CEEEEETTSCEEEEEEE
T ss_pred CCCCcccc--cccC-CCC-----CcEEEECCCC----CEeCCCCCCCCeeEEee
Confidence 99999864 4577 666 8998876543 68999999999999997
No 208
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.84 E-value=3.2e-20 Score=182.55 Aligned_cols=168 Identities=20% Similarity=0.330 Sum_probs=129.2
Q ss_pred ceeecCCCeEEEEEeecc-CCCCeeEEeeCCEEecCCCcEEEeecC-----cEEEccccCCCCEEEEEEEEeCCceeeee
Q psy12060 597 ETYAGEGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIFENG-----NLLISPVSRDDSGIYSCTATNVHGMDESK 670 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~g~~~~~~~~~~~~~~~-----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 670 (978)
...+.+|+.+.|.|.+.+ .|.|.|+|++||..+..+.++.+..++ +|.|.+++.+|+|.|+|.|.| |.....
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~ 88 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNH 88 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEE
Confidence 456889999999999965 799999999999999887776665443 499999999999999999999 444444
Q ss_pred EEEEEE---------------------eCCceeeeCCCceEEEccccEEEEEEeeec-CCcCeEEEEeeCCEEccccccc
Q psy12060 671 GRLIVL---------------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLN 728 (978)
Q Consensus 671 ~~l~v~---------------------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~~W~~~g~~~~~~~~~ 728 (978)
..+.+. .+|.+...+ ...+..|+.+.|.|.+.+. |.| .+.|+|+|.++.....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~--~~~v~~g~~v~l~C~v~g~~P~p--~i~W~k~g~~l~~~~~- 163 (207)
T 3rbs_A 89 STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL--SWEVTGECNVLLKCKVANIKKET--HIVWYKDEREISVDEK- 163 (207)
T ss_dssp EEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE--EEEEETTTEEEEEEEEESCCTTC--EEEEEETTEEECCCCC-
T ss_pred EEEEEEccchhhhcccccccccccccCCCCceEecC--CcEEcCCCcEEEEEEEeCCCCCC--EEEEEECCEECCCCCc-
Confidence 433221 134433322 3678899999999999998 666 4599999999865321
Q ss_pred cccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEc
Q psy12060 729 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 775 (978)
Q Consensus 729 ~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~ 775 (978)
.........|.|.++..+|+|.|+|.|.|..|..++++.|..+
T Consensus 164 ----~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 164 ----HDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp ----CCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ----eEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 1111122479999999999999999999999999998888754
No 209
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.84 E-value=2.2e-20 Score=182.74 Aligned_cols=167 Identities=20% Similarity=0.361 Sum_probs=136.4
Q ss_pred CCCCCCcEEEEEEEeecC-CCeeEEEE-cCccCCCC-ceee-----ecccEEEeCCCCCCCCeEEEEEEEeCC-CceEEE
Q psy12060 410 APKAGDKVRLECVAFGYP-VPSYNWTR-RGSPLPRN-AYFE-----NFNRILTIPNVKVEDQGEYICRASNDR-SALESS 480 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p-~~~v~W~~-~~~~l~~~-~~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~n~~-g~~~~~ 480 (978)
.+.+|++++|.|.+.+.| .+.+.|++ ++..+... .++. .....|.|.+++.+|+|.|+|.+.+.. +..+..
T Consensus 13 ~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 92 (191)
T 1epf_A 13 EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEAT 92 (191)
T ss_dssp EEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEE
T ss_pred EEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEE
Confidence 467999999999999876 78999999 88777632 2221 245789999999999999999999987 566778
Q ss_pred EEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEE-ecCEEEEEeCCCCCC
Q psy12060 481 VTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERD 559 (978)
Q Consensus 481 ~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~d 559 (978)
+.|.|..+|.+...+....+.+|++++|.|.+.|.|.+.+.|++++..+... ...++.. .++.|.|.++.. +|
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~L~i~~~~~-~d 166 (191)
T 1epf_A 93 VNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILK-----KDVRFIVLSNNYLQIRGIKK-TD 166 (191)
T ss_dssp EEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGG-----CCTTEEECTTSCEEETTCCG-GG
T ss_pred EEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeecc-----CCceEEEecCCeEEECCCCh-hh
Confidence 8999999999888888888999999999999999999999999999988632 2233333 455899999986 99
Q ss_pred CeEEEEEEEcCCCceeeEEEEEE
Q psy12060 560 PAMYQCRAKNQLKTRYSSAQLRV 582 (978)
Q Consensus 560 ~G~Y~C~a~n~~g~~~~~~~l~v 582 (978)
+|.|+|.|.|..+.......+.|
T Consensus 167 ~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 167 EGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp CEEEEEEEEEGGGTEEEEEEEEE
T ss_pred CEEEEEEEEEecceeEEEEEEEE
Confidence 99999999998876655555544
No 210
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.84 E-value=5.6e-20 Score=183.38 Aligned_cols=193 Identities=19% Similarity=0.289 Sum_probs=140.9
Q ss_pred eeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEccccccccc--ccccCCCCCCceEeecceEEEeCCCCCCC
Q psy12060 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLV--ANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (978)
Q Consensus 191 ~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (978)
.|...|.+..+. +|++++|.|.+.|.|.+.+.|+|++..+.... ...+......++...+++|.|.++ +.+|
T Consensus 3 ~v~~~~~~~~v~-----~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v-~~~D 76 (212)
T 1f97_A 3 SVYTAQSDVQVP-----ENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSV-TRKD 76 (212)
T ss_dssp EEECSCSEEEEE-----TTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCC-CGGG
T ss_pred eEEecCCCeEEE-----cCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEccc-Cccc
Confidence 455556666554 35669999999999999999999987632110 011112234566777789999998 8999
Q ss_pred CeEEEEEEEeCcee-EEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccc-ccccccc----
Q psy12060 269 RGSYHCKASNKFGS-IISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYF-PNFVEED---- 342 (978)
Q Consensus 269 ~G~Y~C~a~n~~g~-~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~-~~~~~~~---- 342 (978)
+|.|+|.|.|..|. ..+..+.|.|..+|.+.....+..+..|+.++|.|.+..+.|.+.|.|+|++. ++.....
T Consensus 77 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~ 156 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRA 156 (212)
T ss_dssp CEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBS
T ss_pred CeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccccccc
Confidence 99999999998762 34567888888877766555566788899999999965889999999999998 6543222
Q ss_pred ---ceEEE-eeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEcc
Q psy12060 343 ---KRVFV-SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390 (978)
Q Consensus 343 ---~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~ 390 (978)
.++.. ..++.|.|.+++.+|+|.|+|.|.|..|.. ..+..+.|.|..
T Consensus 157 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~s~~~~l~V~~ 207 (212)
T 1f97_A 157 FMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA-MRSEAAHMDAVE 207 (212)
T ss_dssp CSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCC-EECCCEEEEEES
T ss_pred ccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCc-cccceEEEEEEE
Confidence 22333 235689999999999999999999998754 224457777764
No 211
>1oz7_A Echicetin A-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1
Probab=99.84 E-value=6.2e-21 Score=172.42 Aligned_cols=123 Identities=15% Similarity=0.219 Sum_probs=106.7
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCC-CCceEEEEeecC--CCcc
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QRRKWYFGGTQQ--SPNL 102 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~~~w~g~~~~~--~~~~ 102 (978)
.||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++..... ...+||||.+.. .++.
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~~~~~ 79 (131)
T 1oz7_A 1 MCPPGWSSNGVYCYMLFKEP-KTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIGKMYKIWTGLSERSKEQHCS 79 (131)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCCCSEEEEEEEECCCGGGSC
T ss_pred CcCCCcEEeCCEEEEEECCC-CCHHHHHHHHHhcCCCCEECccCCHHHHHHHHHHHHhhcCCCCCEEEeeeCCCCCCCCc
Confidence 49999999999999999994 999999999999 89999999999999999998865433 467999999988 7899
Q ss_pred EEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 103 WVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 103 w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|.|.||+++.+ ..|.+ +|+ +|+.+..... ...|.+..|.....|+|+..
T Consensus 80 ~~W~dg~~~~~--~~W~~-~P~----~Cv~~~~~~~--~~~w~~~~C~~~~~fICe~~ 128 (131)
T 1oz7_A 80 SRWSDGSFFRS--YEIAI-RYS----ECFVLEKQSV--FRTWVATPCENTFPFMCKYP 128 (131)
T ss_dssp CBCSSSBCCSC--CCCCC-SCC----CEEEEEGGGT--TCSEEEECTTSCEEEEEEEC
T ss_pred eEECCCCeecc--ccccC-CCC----CeEEEEccCC--CCeEeecCCCCCCcEEeeec
Confidence 99999999864 45777 776 8999876643 13689999999999999974
No 212
>3ff7_C Killer cell lectin-like receptor subfamily G member 1; KLRG1-cadherin complex, calcium, cell adhesion, cell junction, cell membrane; 1.80A {Homo sapiens} SCOP: d.169.1.0
Probab=99.84 E-value=6.5e-21 Score=166.12 Aligned_cols=112 Identities=25% Similarity=0.455 Sum_probs=97.1
Q ss_pred ccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcCC
Q psy12060 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDG 108 (978)
Q Consensus 29 Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~dg 108 (978)
||++|..|+++||+|+... ++|.+|+.+|+++||+||+|++++|++||..++. ...+||||.+ ++.|.|.||
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WiGl~~---~~~~~W~dg 72 (112)
T 3ff7_C 1 CPDRWMKYGNHCYYFSVEE-KDWNSSLEFCLARDSHLLVITDNQEMSLLQVFLS----EAFSWIGLRN---NSGWRWEDG 72 (112)
T ss_dssp CCTTCEEETTEEEEECSSC-BCHHHHHHHHHTTTCEECCCCSHHHHHHHHTTCC----SSCEEEEEEE---SSSEEETTS
T ss_pred CCccceEeCCEEEEEeCCc-cCHHHHHHHHhhcCCeEeeECCHHHHHHHHHhcc----CCCEEEeeec---CCceEeCCC
Confidence 9999999999999999994 9999999999999999999999999999988763 3578999987 578999999
Q ss_pred CCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 109 TNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
+++.+ ..|.+ ++..++|+.+... .|.+..|.....|+|+.
T Consensus 73 ~~~~~--~~w~~---~~~~~~C~~~~~~------~w~~~~C~~~~~fICek 112 (112)
T 3ff7_C 73 SPLNF--SRISS---NSFVQTCGAINKN------GLQASSCEVPLHWVCKK 112 (112)
T ss_dssp CBCCS--SCEEC---SSTTCCEEEEETT------EEEEECTTSCBEEEEEC
T ss_pred Ccccc--ceecC---CCCCCCCeEEeCC------CcccCCCCCCCceeecC
Confidence 99864 34543 3346899998753 48999999999999984
No 213
>1hup_A Mannose-binding protein; alpha-helical coiled-coil, C-type lectin; 2.50A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Probab=99.84 E-value=5.2e-21 Score=174.44 Aligned_cols=119 Identities=15% Similarity=0.141 Sum_probs=106.1
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.|+++|..++++||+++... ++|.+|+..|+.+||+||+|++++|++||.+++. ..+|||+.+...++.|.|.|
T Consensus 19 ~~~~~w~~~~~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WIGl~~~~~~~~w~W~d 92 (141)
T 1hup_A 19 LTFSLGKQVGNKFFLTNGEI-MTFEKVKALCVKFQASVATPRNAAENGAIQNLIK-----EEAFLGITDEKTEGQFVDLT 92 (141)
T ss_dssp HHHHTSEEETTEEEEEEEEE-EEHHHHHHHHHHTTCEECCCCSHHHHHHHHHHCS-----SCEEEEEECSSSTTCCEETT
T ss_pred hhcCCeEEECCEEEEEeCCC-cCHHHHHHHHHhCCCEECccCCHHHHHHHHHHhc-----CCEEEeeeecCcCCcEEECC
Confidence 69999999999999999984 9999999999999999999999999999998873 67899999988899999999
Q ss_pred CCCCCcccccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 108 GTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|+++.+ ..|.+++|++ +.++|+.+... + .|.+..|.....|+|+.
T Consensus 93 G~~~~~--~~W~~g~P~~~~~~~~Cv~~~~~-g----~W~~~~C~~~~~fICe~ 139 (141)
T 1hup_A 93 GNRLTY--TNWNEGEPNNAGSDEDCVLLLKN-G----QWNDVPCSTSHLAVCEF 139 (141)
T ss_dssp SCBCSC--CCBCTTCCCCGGGCCCEEEECTT-S----CEEEECTTSEEEEEEEE
T ss_pred cCCCcC--CCCCCCCCCCCCCCCCeEEECCC-C----cEeccCCCCCccEEEEE
Confidence 999854 5688888876 46799998732 2 68999999999999997
No 214
>1jwi_A Bitiscetin; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_A
Probab=99.84 E-value=5.4e-21 Score=172.81 Aligned_cols=122 Identities=17% Similarity=0.260 Sum_probs=102.8
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCC-CC-ceEEEEe--ecCCCccE
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGG--TQQSPNLW 103 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~--~~~~~~~w 103 (978)
.||++|+.|+++||+++... ++|.+|+..|+.+||+||+|++++|++||.+++..... .. .+||||. +...++.|
T Consensus 3 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~~~ 81 (131)
T 1jwi_A 3 GCLPDWSSYKGHCYKVFKKV-GTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKFVYDAWIGLRDESKTQQCSP 81 (131)
T ss_dssp -CCTTSEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHC--CCSCEEEEEEECCSSSSSCS
T ss_pred CCCCCCEEeCCEeEEEECCC-cCHHHHHHHHHHcCCeECccCCHHHHHHHHHHHhhcccccCccEEEeeeecCCCCCCce
Confidence 69999999999999999985 99999999999999999999999999999998865432 24 7899999 87778999
Q ss_pred EEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 104 VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 104 ~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.|.||+++.+ ..|. +|+ +|+.+..... ...|.+..|.....|+|+..
T Consensus 82 ~W~dg~~~~~--~~W~--~P~----~C~~~~~~~~--~~~w~~~~C~~~~~fICe~~ 128 (131)
T 1jwi_A 82 QWTDGSSVVY--ENVD--EPT----KCFGLDVHTE--YRTWTDLPCGEKNPFICKSR 128 (131)
T ss_dssp BCTTSCBCCS--CCBS--SCC----CEEEECGGGT--TSSEEEECTTSCEEEEEEC-
T ss_pred EEeCcCcccC--cCCC--CCC----CceEEecCCC--CCeEcCcCCCCCcceeeCcC
Confidence 9999999864 4566 554 8999876542 13689999999999999974
No 215
>3m9z_A Killer cell lectin-like receptor subfamily B MEMB; C-type lectin-like domain, domain swapping, disulfide bond, transmembrane protein; 1.70A {Mus musculus} SCOP: d.169.1.0 PDB: 3t3a_A
Probab=99.84 E-value=4.6e-21 Score=175.07 Aligned_cols=122 Identities=20% Similarity=0.346 Sum_probs=105.8
Q ss_pred ccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEc
Q psy12060 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (978)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~ 106 (978)
..||++|+.|+++||+|+.. +++|.+|+..|+.+||+||+|++++|++||..++... ...+||||.+...++.|.|.
T Consensus 4 ~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~--~~~~WIGl~~~~~~~~w~W~ 80 (139)
T 3m9z_A 4 LECPQDWLSHRDKCFHVSQV-SNTWEEGLVDCDGKGATLMLIQDQEELRFLLDSIKEK--YNSFWIGLRYTLPDMNWKWI 80 (139)
T ss_dssp CCCCTTCEEETTEEEEECSS-CBCHHHHHHHHHHTTCEECCCCCHHHHHHHHHHHTCS--SSCEEEEEEEECCCCCCBCT
T ss_pred CCCCccceecCCEEEEEECC-cCCHHHHHHHHHhcCCeEeeeCCHHHHHHHHHHhccc--CccEEEEEeccCCCCCeEeC
Confidence 47999999999999999999 4999999999999999999999999999999988532 35789999999889999999
Q ss_pred CCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 107 DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 107 dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
||+++.+ ..||..++++ .++|+.+... .|.+..|.....|+|+..
T Consensus 81 dg~~~~~-~~~~~~~~~~--~~~Cv~~~~~------~w~~~~C~~~~~fICe~~ 125 (139)
T 3m9z_A 81 NGSTLNS-DVLKITGDTE--NDSCAAISGD------KVTFESCNSDNRWICQKE 125 (139)
T ss_dssp TSCBCCH-HHHTTSSCTT--CEEEEEEETT------EEEEEETTSCBEEEEEEE
T ss_pred CCCcCCc-CccccCCCCC--CCCeeEEeCC------cEEeCCCCCCCceEeeec
Confidence 9999864 4556555554 5799988642 689999999999999984
No 216
>3alu_A Lectin CEL-IV, C-type; C-type lectin, raffinose, sugar binding protein; HET: RAF; 1.65A {Cucumaria echinata} PDB: 3als_A* 3alt_A*
Probab=99.84 E-value=4.5e-21 Score=178.92 Aligned_cols=128 Identities=16% Similarity=0.313 Sum_probs=110.1
Q ss_pred ccccccceeccCeeEEEEccCCCCHHHHHHHhhh--c---------CCeeeeeCChhhHHHHHHHhhccCC-----C--C
Q psy12060 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--L---------DSDLANVNDADEHGFIMYQLFWQDP-----Q--R 88 (978)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~---------~~~L~~i~~~~e~~~i~~~~~~~~~-----~--~ 88 (978)
..||++|..|+++||+++... ++|.+|+.+|+. + ||+||+|++++|++||.+++..... . .
T Consensus 3 ~~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~~~~~~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~~~~ 81 (157)
T 3alu_A 3 TSCPPLWTGFNGKCFRLFHNH-LNFDNAENACRQFGLASCSGDELATGHLASIHSAESQAFLTELVKTSLPDLITGGWAP 81 (157)
T ss_dssp CEECTTCEEETTEEEEEEEEE-ECHHHHHHHHTTEEEEETTSCEEEECEECCCCSHHHHHHHHHHHHHHCGGGCCSSSCS
T ss_pred CCCCCCcEeeCCEEEEEECCc-cCHHHHHHHhhccccccccCCCCCCeEEcccCCHHHHHHHHHHHHhcccccccccCCC
Confidence 469999999999999999994 999999999999 8 9999999999999999998865432 2 6
Q ss_pred ceEEEEeecCCCccEEEcCCCCCCcccccCCCCCCCcc--cCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 89 RKWYFGGTQQSPNLWVNEDGTNLNELDAAFLPEPADNV--QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 89 ~~w~g~~~~~~~~~w~w~dg~~~~~~~~~~~~~~~~~~--~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.+||||.+...++.|.|.||+++.+ ..|.+++|++. .++|+.+..... ..|.+..|.....|+|+..
T Consensus 82 ~~WIGl~~~~~~~~w~W~dG~~~~y--~~W~~g~P~~~~~~~~Cv~~~~~~~---~~W~d~~C~~~~~fICe~~ 150 (157)
T 3alu_A 82 QVYIGMKVGSTNSDQTWTDGSSVDY--DGWVSGEPNNGPNSRGAIAAGDYSR---GFWADVYSNNNFKYICQLP 150 (157)
T ss_dssp EEEEEEEECSSTTCEEETTCCCCCC--CCBCTTCCCSCSSEEEEEECSTTTT---TCEEEECTTCCEEEEEECC
T ss_pred CEEEeeeeCCCCCCeEeCCCCCCCc--cCcCCCCCCCCCCCCCeEEEecCCC---CeEcCCCCCCccceEeccc
Confidence 7899999998899999999999854 56888888773 578988865532 3789999999999999983
No 217
>1c3a_A Flavocetin-A: alpha subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_A
Probab=99.84 E-value=5.6e-21 Score=173.75 Aligned_cols=123 Identities=16% Similarity=0.212 Sum_probs=106.7
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCC-CC-ceEEEEe--ecCCCc
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGG--TQQSPN 101 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~--~~~~~~ 101 (978)
.||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++..... .. .+||||. +...++
T Consensus 3 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 81 (135)
T 1c3a_A 3 DCIPGWSAYDRYCYQAFSKP-KNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKEQQC 81 (135)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCSCCSEEEEEEEECCCSSSC
T ss_pred CCCCcCEecCCeeEEEeCCC-cCHHHHHHHHhhcCCCCEECeeCCHHHHHHHHHHHhhccccCCCcEEecccccCCCCCC
Confidence 69999999999999999995 999999999999 89999999999999999998865433 24 7899999 877899
Q ss_pred cEEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 102 LWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 102 ~w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.|.|.||+++.+ ..|.+++|+ +|+.+..... ...|.+..|.....|+|+.
T Consensus 82 ~~~W~dg~~~~~--~~W~~~~P~----~C~~~~~~~~--~~~W~d~~C~~~~~fICe~ 131 (135)
T 1c3a_A 82 RSEWSDASSVNY--ENLVKQFSK----KCYALKKGTE--LRTWFNVYCGTENPEVCKY 131 (135)
T ss_dssp CCBCTTSCBCCC--CCBCGGGCC----CEEEEETTSC--SCSBEEECTTSCEEEEEEE
T ss_pred ceEECCCCcccc--cccCCCCCC----cceEEeccCC--CCeEccCCCCCCccEEccc
Confidence 999999999864 468888776 8999876542 1367999999999999997
No 218
>3hup_A Early activation antigen CD69; C-type lectin-like domain, disulfide bond, glycoprotein, LEC membrane, phosphoprotein, signal-anchor, transmembrane; 1.37A {Homo sapiens} SCOP: d.169.1.1 PDB: 1e87_A 1e8i_A 3cck_A
Probab=99.84 E-value=1.6e-20 Score=168.80 Aligned_cols=116 Identities=16% Similarity=0.345 Sum_probs=99.9
Q ss_pred ccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEE
Q psy12060 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~ 104 (978)
.+..||.+|+.|+++||+++.. +++|.+|+.+|+.+||+||+|++++|++||.+++. ...+||||.+. .++.|.
T Consensus 12 ~~~~Cp~gw~~~~~~CY~~~~~-~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~----~~~~WIGl~~~-~~~~w~ 85 (130)
T 3hup_A 12 HVSSCSEDWVGYQRKCYFISTV-KRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAG----REEHWVGLKKE-PGHPWK 85 (130)
T ss_dssp CCBCCCTTCEEETTEEEEECSS-CBCHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHT----TSCEEEEEEEC-TTSCEE
T ss_pred CCCCCChhheecCCEEEEEECC-ccCHHHHHHHHHhcCCEEeecCCHHHHHHHHHhhC----CCCEEEEEEeC-CCCeEE
Confidence 3568999999999999999998 49999999999999999999999999999999873 35789999984 678999
Q ss_pred EcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 105 w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|.||+++. .|.. ....++|+.+... .|.+..|.....|+|+.
T Consensus 86 W~dg~~~~----~w~~---~~~~~~Cv~~~~~------~w~~~~C~~~~~fICe~ 127 (130)
T 3hup_A 86 WSNGKEFN----NWFN---VTGSDKCVFLKNT------EVSSMECEKNLYWICNK 127 (130)
T ss_dssp ETTSCBCC----CCSC---CCSSCSEEEEETT------EEEEECTTSCBEEEEEE
T ss_pred eCCCCccc----CccC---CCCCCCceEEeCC------CcccCCCCCCccEEecc
Confidence 99999843 3552 3346899998653 58999999999999997
No 219
>1htn_A Tetranectin; plasminogen binding, kringle 4, alpha-helical coiled coil, C-type lectin, carbohydrate recognition domain; 2.80A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Probab=99.84 E-value=5.3e-21 Score=182.63 Aligned_cols=128 Identities=15% Similarity=0.198 Sum_probs=109.6
Q ss_pred cccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccC-CCCceEEEEeecCCCccEE
Q psy12060 26 ELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQD-PQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 26 ~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~-~~~~~w~g~~~~~~~~~w~ 104 (978)
+..||.+|. |+++||+|+... ++|.+|+.+|+.+||+||+|++++|++||..++.... ....+||||.+...++.|.
T Consensus 48 ~~~Cp~gw~-~~~~CY~~~~~~-~tw~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~~~~~~~~~~WIGl~~~~~~g~w~ 125 (182)
T 1htn_A 48 QTVCLKGTK-VHMKCFLAFTQT-KTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEGTWV 125 (182)
T ss_dssp HHHHHHSEE-ETTEEEEEEEEE-ECHHHHHHHHHTTTCEECCCCSHHHHHHHHHHHHHHTCSSCEEEEEEECSSSTTCCB
T ss_pred cCCCCCCcE-ECCEEEEEECCC-cCHHHHHHHHhhCCCEEeeeCCHHHHHHHHHHHHhccCCCCcEEEeeECCCCCCeEE
Confidence 457999999 999999999994 9999999999999999999999999999999885432 2467999999998899999
Q ss_pred EcCCCCCCcccccCC---CCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 105 NEDGTNLNELDAAFL---PEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 105 w~dg~~~~~~~~~~~---~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|.||+++.+ ..|. +++|++ +.++|+.+..... ..|++..|.....|+|+..
T Consensus 126 W~dG~~~~y--~nW~~~~~geP~~~~~~~Cv~l~~~~~---g~W~d~~C~~~~~fICe~~ 180 (182)
T 1htn_A 126 DMTGARIAY--KNWETEITAQPDGGKTENCAVLSGAAN---GKWFDKRCRDQLPYICQFG 180 (182)
T ss_dssp CTTSCBCCC--CCBCCSSSCSCCCTTTCCEEEEETTTT---TEEEEECTTSCEEEEEEEE
T ss_pred eCCCCCccC--CCCCCCCCCcCCCCCCCCCEEEccCCC---CCEECCCCCCCeeEEEEEe
Confidence 999999864 5688 777876 4689999874322 3789999999999999973
No 220
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.84 E-value=7.8e-20 Score=179.88 Aligned_cols=182 Identities=21% Similarity=0.342 Sum_probs=147.4
Q ss_pred CCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecC---cEEEccccCCCCEEEEEEEEe
Q psy12060 586 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 662 (978)
Q Consensus 586 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~a~n 662 (978)
+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+....+..+..++ +|.|.++..+|+|.|+|.|.|
T Consensus 7 ~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 7 APGIRKEM--KDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp EEEEEECC--CCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCcccccC--CceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 34444433 3456889999999999999999999999999999888877777666 699999999999999999999
Q ss_pred CCceeeeeEEEEEEeCCceeee--CCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecC--
Q psy12060 663 VHGMDESKGRLIVLHGPSYYEQ--LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-- 738 (978)
Q Consensus 663 ~~g~~~~~~~l~v~~~p~~~~~--~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~-- 738 (978)
..|.......|.|..+|..... .+....+..|+.+.|.|.+.+.|.+. +.|++++..+..... ......
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~--v~W~~~~~~~~~~~~-----~~~~~~~~ 157 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPA--MTWFHGQKLLQNSEN-----ITIENTEH 157 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCE--EEEEETTEECCCCSS-----EEEEECSS
T ss_pred CCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCe--eEEeECCEECCCCCc-----eEEEEcCC
Confidence 9999888889988877765432 23456778999999999999988764 699999998865321 111111
Q ss_pred CceEEEeccCC-CCCEEEEEEEEcCCCceeeeEEEEEcC
Q psy12060 739 GGLLEITNASF-ADAGEYECVVKSTVGKISTKTTVIVEG 776 (978)
Q Consensus 739 ~~~l~i~~~~~-~d~g~Y~c~a~n~~G~~s~~~~l~v~~ 776 (978)
...|.|.++.. +|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 158 ~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 158 YTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 26899999985 899999999999999999999988865
No 221
>1j34_A Coagulation factor IX-binding protein A chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_A* 1j35_A* 1x2t_A* 1x2w_A 1ixx_A 1y17_A 1wt9_A 1iod_A*
Probab=99.84 E-value=5.5e-21 Score=172.45 Aligned_cols=123 Identities=20% Similarity=0.320 Sum_probs=105.7
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCC-CC-ceEEEEe--ecCCCc
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGG--TQQSPN 101 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~--~~~~~~ 101 (978)
.||++|+.|+++||+++... ++|.+|+..|+. .||+||+|++++|++||.+++..... .. .+||||. +...++
T Consensus 1 ~Cp~gw~~~~~~Cy~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 79 (129)
T 1j34_A 1 DCPSGWSSYEGHCYKPFKLY-KTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKEKQC 79 (129)
T ss_dssp CCCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHCCCTTCCEEEEEEECSSCSCS
T ss_pred CCCCCcEEeCCEEEEEECCC-CCHHHHHHHHhccCCCCEECccCCHHHHHHHHHHHhhcccCCCCCEEEeeecCCCCCCC
Confidence 49999999999999999994 999999999999 89999999999999999998865433 24 7999999 877789
Q ss_pred cEEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 102 LWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 102 ~w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
.|.|.||+++.+ ..|.+++|+ +|+.+....+ ...|.+..|.....|+|+.
T Consensus 80 ~~~W~dg~~~~~--~~W~~~~P~----~C~~~~~~~~--~~~w~~~~C~~~~~fiCe~ 129 (129)
T 1j34_A 80 SSEWSDGSSVSY--ENWIEAESK----TCLGLEKETG--FRKWVNIYCGQQNPFVCEA 129 (129)
T ss_dssp CCBCTTSCBCCC--CCBCGGGSC----CEEEECGGGT--TCSBEEECTTSCEEEEEEC
T ss_pred ceEECCcCccce--eccCCCCCC----cceEEEccCC--CCeEccCCCCCCCceEeeC
Confidence 999999999764 458887776 8998866542 1367999999999999984
No 222
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.84 E-value=3.3e-20 Score=179.74 Aligned_cols=161 Identities=22% Similarity=0.442 Sum_probs=133.2
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeee--c----ccEEEeCCCCCCCCeEEEEEEEeCCCc-eEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFEN--F----NRILTIPNVKVEDQGEYICRASNDRSA-LESSV 481 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~--~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~ 481 (978)
..+.+|++++|.|.+.+.|.+.+.|+|++..+........ . ...|.|.+++.+|+|.|+|.+.|..|. .+..+
T Consensus 12 ~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 91 (182)
T 1rhf_A 12 LTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPV 91 (182)
T ss_dssp EEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCE
T ss_pred eEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEE
Confidence 3567999999999999999999999999999876643221 1 368999999999999999999998765 44678
Q ss_pred EEEEEeeceeeccCCcccccCCCceeEEEEeecCCCC-eeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCC
Q psy12060 482 TISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDV-TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 560 (978)
Q Consensus 482 ~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~ 560 (978)
.|.|..+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+.... .....|.|.++ +|+
T Consensus 92 ~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~----------~~~~~L~i~~~---~d~ 158 (182)
T 1rhf_A 92 WLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPA----------PSPSVLNVTGV---TQS 158 (182)
T ss_dssp EEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSE----------ESSEEEEECCC---SSC
T ss_pred EEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCC----------CCceEEEEecc---ccC
Confidence 9999999998888887889999999999999999988 999999999886321 14457888776 588
Q ss_pred eEEEEEEEcCCCceee-EEEEEE
Q psy12060 561 AMYQCRAKNQLKTRYS-SAQLRV 582 (978)
Q Consensus 561 G~Y~C~a~n~~g~~~~-~~~l~v 582 (978)
|.|+|.|.|..|.... .+.|.|
T Consensus 159 G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 159 TMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEEEEECCCCCcccceEEEEe
Confidence 9999999999987743 555554
No 223
>1sb2_B Rhodocetin beta subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_B
Probab=99.84 E-value=1.3e-20 Score=169.47 Aligned_cols=121 Identities=17% Similarity=0.278 Sum_probs=104.6
Q ss_pred ccccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccC--CCCceEEEEeecCCCcc
Q psy12060 27 LRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQD--PQRRKWYFGGTQQSPNL 102 (978)
Q Consensus 27 ~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~--~~~~~w~g~~~~~~~~~ 102 (978)
..||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++.... ....+||||. ++.
T Consensus 2 ~~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WiGl~----~~~ 76 (129)
T 1sb2_B 2 FRCPTTWSASKLYCYKPFKEK-KTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNFDKQRYRAWTGLT----ERN 76 (129)
T ss_dssp CCCCTTCEECSSEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHC---CCCEEEEEE----ECC
T ss_pred CCCCCCCEEeCCEeEEEECCC-cCHHHHHHHHhhcCCCceECccCCHHHHHHHHHHHHhhcccCCCCEeEeec----CCc
Confidence 369999999999999999994 999999999999 8999999999999999999886542 2457899998 789
Q ss_pred EEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 103 WVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 103 w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|.|.||+++.+ ..|.+++|+ +|+.+....+ ...|.+..|.....|+|+..
T Consensus 77 ~~W~dg~~~~~--~~W~~~~P~----~C~~~~~~~~--~~~W~~~~C~~~~~fICe~~ 126 (129)
T 1sb2_B 77 LKWTNGASVSY--ENLYEPYIR----KCFVVQPWEG--KSKWYKADCEEKNAFLCKFP 126 (129)
T ss_dssp CBCTTSCBCCS--CCBSSCCCC----CEEEEEEETT--EEEEEEECTTSCEEEEEEEE
T ss_pred cEECCCCcccc--cccCCCCCC----CeEEEEecCC--CCeEeCcCCCCCcceEeccc
Confidence 99999999864 568888876 8999876643 34789999999999999974
No 224
>3c8j_A Natural killer cell receptor LY49C; MHC, virus, immune system; 2.60A {Mus musculus} SCOP: d.169.1.1 PDB: 3c8k_D 1p4l_D 1ja3_A 1p1z_D
Probab=99.84 E-value=3.5e-21 Score=186.01 Aligned_cols=122 Identities=19% Similarity=0.301 Sum_probs=107.9
Q ss_pred ccccccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEE
Q psy12060 25 LELRCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWV 104 (978)
Q Consensus 25 ~~~~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~ 104 (978)
.+..||++|..|+++||+|+... ++|.+|+..|+.+||+||+|++++|++||..++. ...+||||.+...++.|.
T Consensus 76 ~~~~Cp~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~LasI~s~~E~~fl~~~~~----~~~~WIGl~~~~~~~~w~ 150 (203)
T 3c8j_A 76 DTGRGVKYWFCYSTKCYYFIMNK-TTWSGCKANCQHYGVPILKIEDEDELKFLQRHVI----PGNYWIGLSYDKKKKEWA 150 (203)
T ss_dssp -CCCCCEEEEEEETEEEEEEEEE-ECHHHHHHHHHHTTCCBCCCCSHHHHHHHHHHSC----SSCEEEEEEEETTTTEEE
T ss_pred CCCCCCCCcEEeCCEEEEEECCC-CCHHHHHHHHHhCCCEeeeeCCHHHHHHHHHhcC----CCCEEEeeeecCCCCceE
Confidence 45689999999999999999994 9999999999999999999999999999999874 357899999998899999
Q ss_pred EcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 105 NEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 105 w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|.||+++.+ .|.+++|+.+.++|+.+... .|.+..|.....|+|+..
T Consensus 151 W~DGs~~~~---~w~~~~pn~~~~~Cv~l~~~------~W~d~~C~~~~~fICe~~ 197 (203)
T 3c8j_A 151 WIDNGPSKL---DMKIKKMNFKSRGCVFLSKA------RIEDIDCNIPYYCICGKK 197 (203)
T ss_dssp ETTSCCCTT---HHHHHTTCCCSSSEEEECSS------CEEEECTTSCEEEEEEEE
T ss_pred ECCCCCCCC---CCCCCCCCCCCCCcEEEECC------cEECcCCCCCEEEEEeEC
Confidence 999999863 36667777778899998643 589999999999999984
No 225
>1umr_A Convulxin alpha, CVX alpha; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_A
Probab=99.84 E-value=5.1e-21 Score=173.90 Aligned_cols=124 Identities=15% Similarity=0.265 Sum_probs=107.3
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCC-CC-ceEEEEe--ecCCCc
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGG--TQQSPN 101 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~--~~~~~~ 101 (978)
.||++|+.|+++||+++... ++|.+|+..|+. +||+||+|++++|++||.+++..... .. .+||||. +...++
T Consensus 3 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 81 (135)
T 1umr_A 3 HCPSDWYYYDQHCYRIFNEE-MNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHVSIGLRVQNKEKQC 81 (135)
T ss_dssp SSCTTCEEETTEEEEEEEEE-ECHHHHHHHHHHHSTTCEECCCCSHHHHHHHHHHHHHHSCTTCCEEECSEEECCSSSSS
T ss_pred CCCCCCEEcCCEeEEEECCC-CCHHHHHHHHHccCCCceECccCCHHHHHHHHHHHHhhcccCCCCEEEeccccCCCCCC
Confidence 69999999999999999994 999999999999 89999999999999999998865432 24 7999999 877899
Q ss_pred cEEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 102 LWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 102 ~w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.|.|.||+++.+ ..|.+++|+ +|+.+...... ..|.+..|.....|+|+..
T Consensus 82 ~w~W~dg~~~~~--~~W~~g~P~----~C~~~~~~~~~--g~W~~~~C~~~~~~ICe~~ 132 (135)
T 1umr_A 82 STKWSDGSSVSY--DNLLDLYIT----KCSLLKKETGF--RKWFVASCIGKIPFVCKFP 132 (135)
T ss_dssp CCBCTTSCBCCC--CCBCGGGCC----CEEEEEGGGTT--CSBEEECTTCCEEEEEEEC
T ss_pred ccCcCCCCeecc--cccCCCCCC----ccEEEecCCCC--CeEecCCCCCCCcEEeCcc
Confidence 999999999864 568888776 89998766431 3689999999999999973
No 226
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.84 E-value=7.1e-20 Score=182.67 Aligned_cols=185 Identities=23% Similarity=0.327 Sum_probs=148.8
Q ss_pred CCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeee--cCCceEEEeccCCCCCEEEEEEEEcC
Q psy12060 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN--IDGGLLEITNASFADAGEYECVVKST 762 (978)
Q Consensus 685 ~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~Y~c~a~n~ 762 (978)
.+..+.+..|+.+.|.|.+.+.|.+ .+.|+++|..+..... ....+. .....|.|.++..+|+|.|+|.|.|.
T Consensus 24 ~p~~~~~~~G~~v~l~C~~~g~p~p--~i~W~~~g~~l~~~~~---~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 98 (215)
T 3mtr_A 24 GPVAVYTWEGNQVNITCEVFAYPSA--TISWFRDGQLLPSSNY---SNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNR 98 (215)
T ss_dssp CCSEEEECTTCCEEEEEEEEEESCC--EEEEEETTEESSCSSS---CSEEEEEETTEEEEEECCCSGGGCEEEEEEEECS
T ss_pred CCceEEEECCCCEEEEEEEeecCCC--EEEEEECCeECCCCCC---ccEEEecCCCeeEEEEecCChhhCeEEEEEEEEC
Confidence 4556788899999999999999876 5599999998865321 011111 23568999999999999999999999
Q ss_pred CCceeeeEEEEEcCCCCCCCceEEEEeeCCeeEEEeecCC-CCCCCceeEEEEEeeccccCceEecccccceeeeecCCc
Q psy12060 763 VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 841 (978)
Q Consensus 763 ~G~~s~~~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 841 (978)
.|..+..+.|.+..+|.+|..+.+ .....++.|+|.+|. ++|.++.+|.|+|+..+...|......... ....
T Consensus 99 ~g~~~~~~~l~v~~~P~~p~~~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~-----~~~~ 172 (215)
T 3mtr_A 99 IGQESLEFILVQADTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE-----ASME 172 (215)
T ss_dssp SCEEEEEEEEEECCCCCCCEEEEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHH-----HHHH
T ss_pred CCceEEEEEEEECCCCCCCcceEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccccc-----cccc
Confidence 999999999999999999988877 567789999999776 567799999999999888888765322210 1123
Q ss_pred eeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCC
Q psy12060 842 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882 (978)
Q Consensus 842 ~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~ 882 (978)
..++|.+ |.+++.|.|+|.|.|.+|.|++|..+ .++|++
T Consensus 173 ~~l~i~~-L~~~~~y~~~~~A~N~~G~s~~S~~~-~v~T~p 211 (215)
T 3mtr_A 173 GIVTIVG-LKPETTYAVRLAALNGKGLGEISAAS-EFKTQP 211 (215)
T ss_dssp TEEEEEC-CCTTCEEEEEEEEEESSCBCCCCCCE-EEECCC
T ss_pred ccEEECC-CCCCCEEEEEEEEEeCCcccCcccce-eeEecc
Confidence 6788999 99999999999999999999999876 566653
No 227
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.84 E-value=4.2e-19 Score=194.39 Aligned_cols=252 Identities=14% Similarity=0.138 Sum_probs=180.8
Q ss_pred cc-cEEEEEEeeec-CCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEE
Q psy12060 694 HR-NLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 771 (978)
Q Consensus 694 g~-~~~l~C~~~~~-p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~ 771 (978)
.. .+.|.|..... +...+.+.|...+..-.. . . ..........+.|.++.....+.|++.|.|..|.......
T Consensus 16 ~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~-~---~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~ 90 (375)
T 3t1w_A 16 DTGVLTVSWERSTTPDITGYRITTTPTNGQQGN-S---L-EEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISD 90 (375)
T ss_dssp TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSC-C---E-EEEEETTCCEEEECCCCTTCCEEEEEEEEETTEECCCEEE
T ss_pred CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCc-c---e-eEEcCCCccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEe
Confidence 44 78999986542 233455666654321000 0 0 0122334568899999888888899999998876544433
Q ss_pred EEEcCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccC
Q psy12060 772 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 851 (978)
Q Consensus 772 l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 851 (978)
.....+| +|.++.+...+.+++.|+|.+|. ++++.+|.|+|+..+...+... .........+++.+ |.
T Consensus 91 ~~~~~~p-~p~~l~~~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~--------~~~~~~~~~~~i~~-L~ 158 (375)
T 3t1w_A 91 TIIPEVP-QLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFE--------DFVDSSVGYYTVTG-LE 158 (375)
T ss_dssp EECCCCC-CCSCCEEECCCSSEEEEECCCCC--CTTEEEEEEEEEESSSCCSCEE--------EEECTTCCEEEEEC-CC
T ss_pred eEcCCCC-CCceEEEEecCCCeEEEEEECCC--CCCceEEEEEEEECCCCCceeE--------EEcCCCcceEEEeC-CC
Confidence 3444555 48899999999999999999874 4579999999987655322111 01113456789999 99
Q ss_pred CCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCC-
Q psy12060 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND- 930 (978)
Q Consensus 852 p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~- 930 (978)
|++.|.|+|+|.|..|.|+++... +.| .| .+|.++.+...+.++|.|+|++|+ ++.|.+|+|+|+..+.
T Consensus 159 p~t~Y~~~V~a~~~~g~s~~s~~~--~~t---~~-~~p~~l~~~~~~~~si~l~W~~p~----~~~i~~Y~v~~~~~~~~ 228 (375)
T 3t1w_A 159 PGIDYDISVITLINGGESAPTTLT--QQT---AV-PPPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNE 228 (375)
T ss_dssp TTCEEEEEEEEEETTEECCCEEEE--EEC---CC-CCCEEEEEESCCSSCEEEEEECCS----SCCCCEEEEEEEEGGGT
T ss_pred CCCEEEEEEEEEeCCcccCCeeee--eec---CC-CCCceeEEEecccCEEEEEEcCCC----CCCccEEEEEEEeCCCC
Confidence 999999999999999999987753 344 23 378899999899999999999842 5789999999998763
Q ss_pred ccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCC
Q psy12060 931 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976 (978)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S 976 (978)
..|...... .+. ..+.+.+|.|++.|.|+|+|.|..|.|+++
T Consensus 229 ~~~~~~~~~--~~~--~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~ 270 (375)
T 3t1w_A 229 EDVAELSIS--PSD--NAVVLTNLLPGTEYVVSVSSVYEQHESTPL 270 (375)
T ss_dssp TCCEEEEEC--TTC--CEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred CCcEEEEcC--CCc--CEEEeCCCCCCCEEEEEEEEEcCCCcCCce
Confidence 344433322 222 347799999999999999999999999875
No 228
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.83 E-value=6.3e-20 Score=182.79 Aligned_cols=186 Identities=16% Similarity=0.172 Sum_probs=135.7
Q ss_pred CCCCCCCceEEEEe-eCCeeEEEeecCCCCCCCceeEEEEEeecccc------CceEecccccceeeeecCCceeeEEee
Q psy12060 776 GPPGLPGGVQVVEV-HKTSATIQWTDGATNGRPITHYKIIARTNWNS------TWFNVSEHVIGKEVDRYTGRKEASIEN 848 (978)
Q Consensus 776 ~~P~~P~~~~~~~~-~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (978)
.||++|.++.+... ..++++++|+++.+.+.+ ..|.|+|+..... .|..+... .......+.+.+
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~~~-~~Y~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 74 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHLP-TSFILKSFRSRADCQYQGDTIPDCVAK-------KRQNNCSIPRKN 74 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSC-CEEEEEEEECCGGGCSCCCEEEEEECC-------TTCCEEEEEGGG
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCCCCCc-eeEEEEEEecCCcccccccccccCCCC-------CCCcEEEECCcc
Confidence 48999999998766 578999999999886655 5799999865321 12211110 011223456668
Q ss_pred ccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeeccc------ccCcEEEEEEeCCCCCCCCCcceEE
Q psy12060 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG------KIGDLSISWEPLPREKQNAPNIYYK 922 (978)
Q Consensus 849 ~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~------~~~si~v~W~~p~~~~~~g~i~~Y~ 922 (978)
|.+++.|.|+|.|.|..|.+.. ... .+.+.+.+++.+|.++.+... +.++|.|+|++|. ..+..+++|.
T Consensus 75 -L~~~~~Y~~~V~A~N~~G~~~s-~~~-~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~--~~~~~~l~Y~ 149 (215)
T 1cd9_B 75 -LLLYQYMAIWVQAENMLGSSES-PKL-CLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWK--PSEYMEQECE 149 (215)
T ss_dssp -CCTTSCEEEEEEEEETTEEEEC-CCE-EECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCG--GGTTSCEEEE
T ss_pred -cccceEEEEEEEEECCCCCccC-ccE-EEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCC--CCCeEEEEEE
Confidence 9999999999999999998753 322 455555567799999998876 6789999999853 3444558999
Q ss_pred EEEE-ecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 923 IFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 923 i~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
|+|+ ..+...|....... . ....+.|.+|.|++.|.|+|+|.|.+|.|++|+
T Consensus 150 v~y~~~~~~~~w~~~~~~~-~--~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~ 202 (215)
T 1cd9_B 150 LRYQPQLKGANWTLVFHLP-S--SKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSP 202 (215)
T ss_dssp EEEEESSTTCCCEEEEEEE-S--CEEEEEECCCCSCSCEEEEEEEEESSSCCCCCC
T ss_pred EEEccCCCCCCcEEEeccc-C--cceEEEEcCCCCCCEEEEEEEeeECCCCCCCcC
Confidence 9999 67777787542221 1 224577999999999999999999999887654
No 229
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.83 E-value=2.3e-20 Score=183.51 Aligned_cols=172 Identities=14% Similarity=0.175 Sum_probs=128.4
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCe-EEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPS-YEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 266 (978)
+.|.|...|.+..+. +|+.++|.|.+.|.|.+. +.|+|+|..+.. ..++|.|.++ +.
T Consensus 6 p~p~i~~~p~~~~v~-----~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~----------------~~~~L~i~~v-~~ 63 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVL-----EKDSVTLKCQGAYSPEDQSTQWFHNESLISS----------------QASSYFIDAA-TV 63 (204)
T ss_dssp CBCEEEEESCCSEEE-----TTCCEEEEEECCSSSSCCCEEEEETTEEESC----------------CSSEEEESSC-CG
T ss_pred CCCeEEEcCCCeEEE-----CCCCEEEEEcCCCCCCCcEEEEEECCEEccc----------------CccEEEEecc-cc
Confidence 357888888865544 466799999999988875 999999865421 1268999997 89
Q ss_pred CCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEE
Q psy12060 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 346 (978)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 346 (978)
+|+|.|+|.|.|... +..+.|.|...+.+... +...+.+|+.++|.|.+..+.|.+.|.|+|+|..+. .
T Consensus 64 ~D~G~Y~C~a~n~~~---s~~~~l~V~~~p~~~~~-~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~-------~ 132 (204)
T 3sgj_C 64 DDSGEYRCQTQLSTL---SDPVQLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK-------Y 132 (204)
T ss_dssp GGCEEEEEEETTSBC---CCCEEEEEECSSEEEEC-SCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEE-------E
T ss_pred cCCEEEEEEeCCCcc---cccEEEEEecCceEecC-CceeEeCCCcEEEEEEecCCCCCceEEEEECCcEee-------c
Confidence 999999999988533 45677877766543333 336677899999999986666778999999987632 1
Q ss_pred EeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCc
Q psy12060 347 VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNF 394 (978)
Q Consensus 347 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~ 394 (978)
...++.|.|.+++.+|+|.|+|.|.|..+ +..+..+.|.|..++..
T Consensus 133 ~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~--~~~s~~~~l~V~~~~~~ 178 (204)
T 3sgj_C 133 FHHNSDFYIPKATLKDSGSYFCRGLVGSK--NVSSETVQITITQGLAV 178 (204)
T ss_dssp EEECCCEEESSCCGGGCEEEEEEEEETTE--EEECCCEEEEEEC----
T ss_pred ccCCceEEECcCCcccCEEEEEEEEeCCC--ceecCcEEEEEeCcCCC
Confidence 23467899999999999999999999543 34455688888876543
No 230
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*
Probab=99.83 E-value=1.3e-20 Score=173.48 Aligned_cols=119 Identities=10% Similarity=0.071 Sum_probs=105.9
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.||++|..++++||+++... ++|.+|+..|+.+||+||+|++++|++||.+++. ..+|||+.+...++.|.|.|
T Consensus 27 ~~~~~w~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WIGl~~~~~~~~w~W~d 100 (149)
T 1rtm_1 27 HAFSMGKKSGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK-----TSAFLGITDEVTEGQFMYVT 100 (149)
T ss_dssp HHHHTTCCTTSCEEEEEEEE-EEHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHS-----SCEEEEEECSSSTTCCEETT
T ss_pred hcCCCeEEeCCEEEEEeCCC-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhc-----CCEEEEeeccCcCCeEEECC
Confidence 58999999999999999985 9999999999999999999999999999998882 67899999988899999999
Q ss_pred CCCCCcccccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 108 GTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|+++.+ ..|.+++|++ +.++|+.+... + .|.+..|.....|+|+.
T Consensus 101 g~~~~~--~~W~~g~P~~~~~~~~Cv~~~~~-g----~W~d~~C~~~~~fICe~ 147 (149)
T 1rtm_1 101 GGRLTY--SNWKKDEPNDHGSGEDCVTIVDN-G----LWNDISCQASHTAVCEF 147 (149)
T ss_dssp SSBCCS--CCBCTTCCCCCTTCCCEEEECGG-G----CEEEECTTSEEEEEEEE
T ss_pred CCCccc--cCcCCCCCCCCCCCCCeEEECCC-C----CEeCCCCCCCeeEEEEe
Confidence 999854 5688888876 46799998732 2 68999999999999997
No 231
>2ls8_A C-type lectin domain family 4 member D; structural genomics, NEW YORK structural genomics research consortium, nysgrc, PSI-biology, immune system; NMR {Homo sapiens}
Probab=99.73 E-value=2.4e-22 Score=186.98 Aligned_cols=127 Identities=20% Similarity=0.386 Sum_probs=110.5
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.||++|..|+++||+++... ++|.+|+..|+.+||+||+|++++|++||.+++.. ...+||||.+...++.|.|.|
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~---~~~~WIGl~~~~~~~~w~W~d 77 (156)
T 2ls8_A 2 VCPIDWRAFQSNCYFPLTDN-KTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDR---RLSYFLGLRDENAKGQWRWVD 77 (156)
Confidence 59999999999999999995 99999999999999999999999999999998843 356899999988899999999
Q ss_pred CCCCCcccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 108 GTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|+.+...+..|.+++|++ ..++|+.+....+ ...|.+..|.....|+|+..
T Consensus 78 G~~~~~~~~~W~~g~P~~~~~~~Cv~l~~~~~--~~~W~d~~C~~~~~fICe~~ 129 (156)
T 2ls8_A 78 QTPFNPRRVFWHKNEPDNSQGENCVVLVYNQD--KWAWNDVPCNFEASRICKIP 129 (156)
Confidence 999853345688888876 6789999876543 24689999999999999983
No 232
>3gpr_D Rhodocetin subunit delta; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}
Probab=99.83 E-value=3e-21 Score=172.39 Aligned_cols=120 Identities=22% Similarity=0.332 Sum_probs=104.4
Q ss_pred ccccceeccCeeEEEEccCCCCHHHHHHHhhhc--CCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEc
Q psy12060 29 CPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNE 106 (978)
Q Consensus 29 Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~--~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~ 106 (978)
||++|+.|+++||+++... ++|.+|+..|+.+ ||+||+|++++|++||..++........+||||.+...++.|.|.
T Consensus 1 Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~WIGl~~~~~~~~~~W~ 79 (124)
T 3gpr_D 1 CPLHWSSYNGYCYRVFSEL-KTWEDAESFCYAQHKGSRLASIHSREEEAFVGKLASQTLKYTSMWLGLNNAWAACKWEWS 79 (124)
T ss_dssp CCSSCCCSSSEEEEEEEEE-EESHHHHHHHHHHSTTCBSCCCCSHHHHHHHHHHHHHSCSSCCBCCSEECCSSCSSCSSS
T ss_pred CCCcceecCCEeEEEeCCC-cCHHHHHHHHHhcCCCCEEcccCCHHHHHHHHHHHHhcCCCCCEEEEeEcCCCCCceEEC
Confidence 9999999999999999994 9999999999999 999999999999999999986654446799999999889999999
Q ss_pred CCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 107 DGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 107 dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
||+++.+ ..|.+ +| +|+.+...... ..|.+..|.....|+|+.
T Consensus 80 dg~~~~~--~~W~~-~p-----~C~~~~~~~~~--~~W~~~~C~~~~~fiCe~ 122 (124)
T 3gpr_D 80 DDAKLDY--KVWLR-RA-----YCAVMVVKTDR--IFWYNRGCEKTVSFLCKF 122 (124)
T ss_dssp SCCCSCC--BCCCS-CC-----CEECCBCCSSS--CBBCEECTTSEEEEEEEE
T ss_pred CCCcccc--cccCC-CC-----CcEEEEcCCCC--CcEeCCCCCCCccEEeee
Confidence 9999864 45766 22 89888665421 367999999999999997
No 233
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.83 E-value=5.3e-20 Score=183.02 Aligned_cols=194 Identities=21% Similarity=0.300 Sum_probs=141.0
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEccccccccc--ccccCCCCCCceEeecceEEEeCCCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLV--ANLIDPLSDKRFTLSGGNLIINDPRQV 266 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~~~ 266 (978)
++.|...|.+..+. +|+++.|.|.+.|.|.+.+.|+|++..+.... ...+......++...+++|.|.++ +.
T Consensus 4 ~~~i~~~~~~~~v~-----~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~-~~ 77 (209)
T 1nbq_A 4 SVTVHSSEPEVRIP-----ENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSV-TR 77 (209)
T ss_dssp CCEEECSCSBCCEE-----TTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCC-CT
T ss_pred eEEEEcCCCceEEE-----cCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeC-CH
Confidence 34556666666544 46679999999999999999999987532111 011122234566666789999998 89
Q ss_pred CCCeEEEEEEEeCcee-EEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEeccccccccccc---
Q psy12060 267 EDRGSYHCKASNKFGS-IISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED--- 342 (978)
Q Consensus 267 ~d~G~Y~C~a~n~~g~-~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~--- 342 (978)
+|+|.|+|.|.|..|. ..+..+.|.|..+|.+.....+..+..|+.++|.|.+..+.|.+.|.|+|++.++.....
T Consensus 78 ~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 157 (209)
T 1nbq_A 78 EDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTR 157 (209)
T ss_dssp TSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSS
T ss_pred HHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccce
Confidence 9999999999998762 345677888887777665555667888999999999878899999999999887543322
Q ss_pred ----ceEEEe-eCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEc
Q psy12060 343 ----KRVFVS-YDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (978)
Q Consensus 343 ----~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~ 389 (978)
.++.+. ..+.|.|.+++.+|+|.|+|.|.|..|... .+..+.|.|.
T Consensus 158 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~s~~v~l~V~ 208 (209)
T 1nbq_A 158 AFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPM-TSNAVRMEAV 208 (209)
T ss_dssp SCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCE-ECCCBCCEEE
T ss_pred eeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccc-ccccEEEEEe
Confidence 112222 346899999999999999999999987542 2344666664
No 234
>3gpr_C Rhodocetin subunit gamma; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}
Probab=99.83 E-value=2.8e-21 Score=175.41 Aligned_cols=124 Identities=14% Similarity=0.206 Sum_probs=106.5
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhc--CCeeeeeCChhhHHHHHHHhhccCCC--CceEEEEeecCCCcc-
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSL--DSDLANVNDADEHGFIMYQLFWQDPQ--RRKWYFGGTQQSPNL- 102 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~--~~~L~~i~~~~e~~~i~~~~~~~~~~--~~~w~g~~~~~~~~~- 102 (978)
.||++|+.|+++||+++... ++|.+|+.+|+.+ ||+||+|++++|++||.+++...... ..+||||.+...++.
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~tw~~A~~~C~~~~~G~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 80 (134)
T 3gpr_C 2 NCLPGWSAYDQHCYQAFNEP-KTWDEAERFCTEQAKRGHLVSIGSDGEADFVAQLVTNNIKRPELYVWIGLRDRRKEQQC 80 (134)
T ss_dssp CCCTTCEESSSCEEEECSCC-BCSHHHHHHHTTSSSCCEECCCCCHHHHHHHHHHHHHHHCSSCCBCCCSCBCCSSTTSC
T ss_pred cCCCcceeeCCEEEEEeCCC-cCHHHHHHHHHhhCCCceEeeeCCHHHHHHHHHHHHhhccCCCCcEEEeeEecCCCCCc
Confidence 69999999999999999995 9999999999999 89999999999999999988654332 678999999988999
Q ss_pred E-EEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 103 W-VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 103 w-~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
| .|.||+++.+ ..|.+++| ++|+.+....+ ...|.+..|.....|+|+..
T Consensus 81 w~~W~dG~~~~~--~~W~~~~~----~~Cv~~~~~~~--~~~W~~~~C~~~~~fICe~~ 131 (134)
T 3gpr_C 81 SSEWSMSASIIY--VNWNTGES----QMCQGLARWTG--FRKWDYSDCQAKNPFVCKFS 131 (134)
T ss_dssp SCEETTCCCSCC--BCBSSCEE----CCEECCBCSSS--SCBBCEECTTCCBCCEEEEC
T ss_pred CCEeCCcCcccc--cccCCCCC----CcceEEeccCC--CCcCcCCCCCCCCcEEeCcC
Confidence 9 9999999864 45777654 78998865433 34689999999999999973
No 235
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.83 E-value=5.3e-20 Score=182.76 Aligned_cols=184 Identities=11% Similarity=0.084 Sum_probs=126.6
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecc--eEEEeCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGG--NLIINDPRQ 265 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~ 265 (978)
.+|.|...|.. .+ .+|++|+|+|.+.+ |.+.|.|+|+|..+..... ........+ .|.|.++ +
T Consensus 8 ~~P~i~~~p~~-~v-----~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-------~~~~~~~~~~~~L~I~~v-~ 72 (218)
T 1uct_A 8 PMPFISAKSSP-VI-----PLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-------RRLKFWNETDPEFVIDHM-D 72 (218)
T ss_dssp CCCCEEESSCS-EE-----ETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-------EECC----CCCEEEECSC-C
T ss_pred CCCEEEecCCC-cc-----CCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-------ccCCCCcceeeEEEEccc-c
Confidence 46889998874 33 34677999999987 6789999999875421100 000012234 8999997 8
Q ss_pred CCCCeEEEEEEEeCce-eEEeEEEEEEEeee---cccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccc
Q psy12060 266 VEDRGSYHCKASNKFG-SIISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEE 341 (978)
Q Consensus 266 ~~d~G~Y~C~a~n~~g-~~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~ 341 (978)
.+|+|.|+|.|.|..| ...+..+.|.|... |.+... +...+.+|+.++|.|.+ .+.|.+.|.|+|+|..+..
T Consensus 73 ~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~-p~~~v~~G~~v~L~C~~-~~~~~~~~~W~k~g~~~~~-- 148 (218)
T 1uct_A 73 ANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSAD-RGLVLMPGENISLTCSS-AHIPFDRFSLAKEGELSLP-- 148 (218)
T ss_dssp GGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEES-SCSEECTTCCCEEEEEC-SSSCCSEEEEEETTCSSCC--
T ss_pred cccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeC-CCCccCCCCCEEEEEeC-CCCCCCEEEEEECCCcccc--
Confidence 9999999999999875 34566777777542 222222 24567889999999955 4557789999999977533
Q ss_pred cceEEEeeCCcEEEeeeeeecceeeEEEEEeeccc--ccccCCceeEEEccC
Q psy12060 342 DKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD--TGRNGPFFPLKVFPH 391 (978)
Q Consensus 342 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~--~~~~~~~~~l~V~~~ 391 (978)
.......++.|.|.+++.+|+|.|+|.|.|.... ....+..+.|.|...
T Consensus 149 -~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 149 -QHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp -SEEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred -cccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 1222234568999999999999999999986422 223455678888754
No 236
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.83 E-value=5.8e-20 Score=176.30 Aligned_cols=168 Identities=14% Similarity=0.188 Sum_probs=126.1
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCe-EEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPS-YEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 266 (978)
++|.|...|....+. +|++++|.|.+.|.|.+. +.|+|+|..+. ..+++|.|.++ +.
T Consensus 6 ~~p~i~~~p~~~~v~-----~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~----------------~~~~~L~i~~~-~~ 63 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVL-----EKDSVTLKCQGAYSPEDNSTQWFHNESLIS----------------SQASSYFIDAA-TV 63 (175)
T ss_dssp CCCEEEEESCCSEEE-----TTCCEEEEEECCCBTTBCCCEEEETTEEEE----------------SSCSEEEESSC-CG
T ss_pred CCCEEEEcCCceeee-----CCCcEEEEeeCCCCCCCcceEEEECCEEcc----------------CCceEEEEeCC-Cc
Confidence 458888888875544 456699999999988776 89999986432 13568999997 89
Q ss_pred CCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEE
Q psy12060 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 346 (978)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 346 (978)
+|+|.|+|.|.|..+ +..+.|.|...+.. .......+.+|+.++|.|.+..+.|.+.|.|+|+|.++. .
T Consensus 64 ~d~G~Y~C~~~n~~~---s~~~~l~V~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~-------~ 132 (175)
T 1fnl_A 64 NDSGEYRCQTNLSTL---SDPVQLEVHIGWLL-LQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK-------Y 132 (175)
T ss_dssp GGCEEEEEECSSSCC---CCCEEEEEECSSEE-EECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE-------E
T ss_pred ccCEEEEEEeeCCcc---cccEEEEEeCCCce-eeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEcc-------C
Confidence 999999999998655 45677777643332 223445677899999999986555667999999987642 1
Q ss_pred EeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEcc
Q psy12060 347 VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390 (978)
Q Consensus 347 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~ 390 (978)
...++.|.|.+++.+|+|.|+|.|.|..+. ..+..+.|.|..
T Consensus 133 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~--~~s~~~~l~V~~ 174 (175)
T 1fnl_A 133 FHHNSDFHIPKATLKDSGSYFCRGLVGSKN--VSSETVNITITQ 174 (175)
T ss_dssp EEECCCEEESSCCGGGCEEEEEEEEETTEE--EECCCEEEEEEC
T ss_pred CCCCCEEEEcccChhhCeEEEEEEEcCCCC--ccCccEEEEEeC
Confidence 234678999999999999999999997543 334457777753
No 237
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.83 E-value=5.3e-20 Score=183.47 Aligned_cols=164 Identities=20% Similarity=0.284 Sum_probs=130.7
Q ss_pred CCCCcEEEEEEEee-cCCCeeEEEEcCccCCCCceee----ecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEE
Q psy12060 412 KAGDKVRLECVAFG-YPVPSYNWTRRGSPLPRNAYFE----NFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486 (978)
Q Consensus 412 ~~G~~~~l~C~~~g-~p~~~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 486 (978)
..|+.+.|.|.+.+ .|.+.|+|+|++..+....++. .....|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 36788888888887 4588999999999987655432 122469999999999999999999988888777777665
Q ss_pred e--------------------ece-eeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEe
Q psy12060 487 A--------------------EPN-FTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ 545 (978)
Q Consensus 487 ~--------------------~p~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~ 545 (978)
. .|. +...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+.. ..++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~-------~~~~~~~ 167 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQ-------TDHCNLK 167 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECC-------CSSEEEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECcc-------CCCEEEE
Confidence 2 233 33345556789999999999999999999999999999873 2333333
Q ss_pred c-----CEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEE
Q psy12060 546 D-----NVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583 (978)
Q Consensus 546 ~-----~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 583 (978)
. ..|.|.++.. +|+|.|+|.|.|..|.......|.|.
T Consensus 168 ~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 168 FEAGRTAYFTINGVST-ADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp EETTTEEEEEESSCCG-GGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCCEEEEEEcCcch-HHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 2 2899999986 99999999999999988887777776
No 238
>2e3x_B Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=99.83 E-value=7.8e-21 Score=172.56 Aligned_cols=124 Identities=19% Similarity=0.228 Sum_probs=106.1
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhh--cCCeeeeeCChhhHHHHHHHhhccCC-CC-ceEEEEe--ecCCCc
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKS--LDSDLANVNDADEHGFIMYQLFWQDP-QR-RKWYFGG--TQQSPN 101 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~--~~~~L~~i~~~~e~~~i~~~~~~~~~-~~-~~w~g~~--~~~~~~ 101 (978)
.||++|+.|+++||+++... ++|.+|+..|+. .||+||+|++++|++||.+++..... .. .+||||. +...++
T Consensus 2 ~Cp~gw~~~~~~CY~~~~~~-~~w~~A~~~C~~~~~g~~La~i~s~~e~~~l~~~~~~~~~~~~~~~WIGl~~~~~~~~~ 80 (134)
T 2e3x_B 2 DCPPDSSLYRYFCYRVFKEH-KTWEAAERFCMEHPNNGHLVSIESMEEAEFVAKLLSNTTGKFITHFWIGLMIKDKEQEC 80 (134)
T ss_dssp CCTTTSEEETTEEEEEEEEE-EEHHHHHHHHTSTTTTCCBCCCCSHHHHHHHHHHHHTCC----CEEECCEEECSSCTTT
T ss_pred CCCCCCEEeCCEeeEEeCCC-cCHHHHHHHHhccCCCcEEcccCCHHHHHHHHHHHHhhccCCCCCEEEeeeecCCCCCC
Confidence 59999999999999999994 999999999999 89999999999999999998865432 24 7899999 877889
Q ss_pred cEEEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 102 LWVNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 102 ~w~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.|.|.||+++.+ ..|.+++|+ +|+.+..... ...|.+..|.....|+|+..
T Consensus 81 ~~~W~dg~~~~~--~~W~~~~P~----~C~~~~~~~~--~~~w~~~~C~~~~~~ICe~~ 131 (134)
T 2e3x_B 81 SSEWSDGSSVSY--DKLGKQEFR----KCFVLEKESG--YRMWFNRNCEERYLFVCKVP 131 (134)
T ss_dssp TCCCTTSCCCCC--CCBCGGGCC----CEEEEEGGGT--TCCBEEECTTSEEEEEEEEC
T ss_pred ccEeCCCCcccc--cccCCCCCC----CeEEEEecCC--CCcCCCCCCCCCcceEeCcc
Confidence 999999999864 458888776 8999876643 13689999999999999973
No 239
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.83 E-value=1.5e-20 Score=184.32 Aligned_cols=170 Identities=11% Similarity=0.072 Sum_probs=109.5
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
.+|.|...|.. .+ .+|++++|.|.+.|.|. .+.|+|+|..+..... .......++.|.|.++ +.+
T Consensus 4 ~~P~i~~~p~~-~v-----~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-------~~~~~~~~~~L~i~~v-~~~ 68 (196)
T 2d3v_A 4 SKATLWAEPGS-VI-----SRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-------NPLEPKNKARFSIPSM-TEH 68 (196)
T ss_dssp CBCEEEEESCS-EE-----ETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-------CCCSSTTEEEEEESSC-CGG
T ss_pred CCCEEEeCCCC-cc-----cCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-------cccCCccccEEEeccC-Chh
Confidence 35888888875 33 34677999999998875 9999999975421100 0011123567999997 899
Q ss_pred CCeEEEEEEEeCcee-EEeEEEEEEEeee---cccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccc
Q psy12060 268 DRGSYHCKASNKFGS-IISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (978)
Q Consensus 268 d~G~Y~C~a~n~~g~-~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 343 (978)
|+|.|+|.|.|..|. ..+..+.|.|... +.+... +...+.+|+.++|.|.+ .+.| +.|.|+|+|..+......
T Consensus 69 D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~-~~~~v~~G~~v~L~C~~-~~~p-~~~~W~k~g~~~~~~~~~ 145 (196)
T 2d3v_A 69 HAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSAL-PSPVVTSGENVTLQCGS-RLRF-DRFILTEEGDHKLSWTLD 145 (196)
T ss_dssp GCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEE-SSCC-SEEEEEEC---CCEEEEE
T ss_pred HCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEcc-CCccccCCCcEEEEEEc-CCCC-CEEEEEccCCcccccccc
Confidence 999999999998874 3356677777653 222222 22467789999999998 4556 899999999775321111
Q ss_pred eEEEe---eCCcEEEeeeeeecceeeEEEEEeecc
Q psy12060 344 RVFVS---YDGALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 344 ~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
..... ..+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 146 ~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 146 SQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp CEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 11111 125799999999999999999998753
No 240
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.83 E-value=5.9e-19 Score=192.70 Aligned_cols=248 Identities=14% Similarity=0.117 Sum_probs=176.6
Q ss_pred cEEEEEEeeec-CCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy12060 696 NLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774 (978)
Q Consensus 696 ~~~l~C~~~~~-p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v 774 (978)
.+.|.|..... +...+.+.|...+..-.. . . ..........+.|.++.....+.|++.|.|..|..... ...+
T Consensus 18 sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~-~---~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~-~~~~ 91 (368)
T 1fnf_A 18 VLTVSWERSTTPDITGYRITTTPTNGQQGN-S---L-EEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPI-SDTI 91 (368)
T ss_dssp CEEEEEECCSCSSCCEEEEEEEETTTCSSC-C---E-EEEECTTCCEEECCCCCTTSCEEEEEEEEETTEECCCE-EEEE
T ss_pred EEEEEEeCCCCCCceEEEEEEEECCCCCCc-e---e-EEEecCCcCEEEECCCCCCCEEEEEEEEEcCCCccCce-eeee
Confidence 48899987542 333455566543321000 0 0 01122345678888898888889999999998854432 3344
Q ss_pred cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeecccc-CceEecccccceeeeecCCceeeEEeeccCCC
Q psy12060 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853 (978)
Q Consensus 775 ~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~ 853 (978)
...|.+|.++++...+.+++.|+|.+|. ++++.+|.|+|+..... .|..... ......+++.+ |.|+
T Consensus 92 ~~~~~~p~~l~~~~~~~~si~l~W~~p~--~~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~i~~-L~p~ 159 (368)
T 1fnf_A 92 IPAVPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDVAELSI---------SPSDNAVVLTN-LLPG 159 (368)
T ss_dssp CCCCCCCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCTTCCEEEEE---------CTTCCEEEECS-CCTT
T ss_pred cCCCcCCceeEEEEcCCCeEEEEeeCCC--CCCCcEEEEEEEECCCCCccEEEEc---------CCCcceEEecC-CCCC
Confidence 4445588899998889999999999984 35799999999976543 4443221 12456789999 9999
Q ss_pred ceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCc-c
Q psy12060 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-E 932 (978)
Q Consensus 854 ~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~-~ 932 (978)
+.|.|+|+|.|..|.|.+.... . ..++.+|.++.+...+.++|.|+|++| +|.|.+|+|+|+..+.. .
T Consensus 160 t~Y~~~V~a~~~~g~s~~~~~~--~----~~~~~~P~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~~~~~ 228 (368)
T 1fnf_A 160 TEYVVSVSSVYEQHESTPLRGR--Q----KTGLDSPTGIDFSDITANSFTVHWIAP-----RATITGYRIRHHPEHFSGR 228 (368)
T ss_dssp CEEEEEEEEEETTEECCCEEEE--E----ECCCCCCEEEEEESCCSSEEEEEEECC-----SSCCSEEEEEEECSCCSSC
T ss_pred CEEEEEEEEEeCCCCCCCeEee--e----cCCCCCCCccEEEEccCCEEEEEEeCC-----CCCcCEEEEEEecCCCCCC
Confidence 9999999999999988764321 1 233467889999999999999999984 26899999999987643 3
Q ss_pred ceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCC
Q psy12060 933 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976 (978)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S 976 (978)
+....+. .+. ..+.+.+|.|++.|.|+|+|.|..|.|+++
T Consensus 229 ~~~~~~~--~~~--~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~ 268 (368)
T 1fnf_A 229 PREDRVP--HSR--NSITLTNLTPGTEYVVSIVALNGREESPLL 268 (368)
T ss_dssp CEEEEEE--TTC--CEEEEESCCTTCEEEEEEEEEETTEECCCE
T ss_pred ccEEEeC--CCc--CEEEECCCCCCCEEEEEEEEEeCCccCCcc
Confidence 3322222 222 346788999999999999999999999875
No 241
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.82 E-value=1.9e-19 Score=174.44 Aligned_cols=173 Identities=18% Similarity=0.353 Sum_probs=132.8
Q ss_pred eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEe----cCEEEEEeCCCCCCCeEE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMY 563 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y 563 (978)
+|.+...+....+.+|++++|.|.+.+.|.+.+.|+|++..+... ........ ...|.|.++.. +|+|.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~-----~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y 75 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNL-----DQLYIPVSEQHWIGFLSLKSVER-SDAGRY 75 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSS-----EEEEEEEETTEEEEEEEESSCCG-GGCEEE
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCC-----CceEEEecCCCceEEEEEeecCc-ccCeEE
Confidence 456666777788999999999999999899999999999988632 11111222 25799999986 999999
Q ss_pred EEEEEcCCCce-eeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCC-eeEEeeCCEEecCCCcEEEeecC
Q psy12060 564 QCRAKNQLKTR-YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENG 641 (978)
Q Consensus 564 ~C~a~n~~g~~-~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~ 641 (978)
+|.+.|..+.. .....|.|.. +|.+...+. ...+..|+.+.|.|.+.+.|.| .+.|++++..+..... ...
T Consensus 76 ~C~~~~~~~~~~~~~~~l~V~~-~p~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~----~~~ 148 (182)
T 1rhf_A 76 WCQVEDGGETEISQPVWLTVEG-VPFFTVEPK--DLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP----SPS 148 (182)
T ss_dssp EEEESSCTTCEECCCEEEEEEC-SCEEEECCC--CEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE----SSE
T ss_pred EEEEEcCCCcEEEEEEEEEEec-CCeEEecCc--ceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC----Cce
Confidence 99999987653 3466777763 676665443 3568899999999999999999 9999999998865422 455
Q ss_pred cEEEccccCCCCEEEEEEEEeCCceeee-eEEEEE
Q psy12060 642 NLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIV 675 (978)
Q Consensus 642 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v 675 (978)
.|.|.++ +|+|.|+|.|.|..|...+ .+.|.|
T Consensus 149 ~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 149 VLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 6999988 5899999999999998864 666665
No 242
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.82 E-value=2.6e-19 Score=182.53 Aligned_cols=186 Identities=22% Similarity=0.335 Sum_probs=138.1
Q ss_pred cceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCc----EEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeE
Q psy12060 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR----RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 671 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~----~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 671 (978)
....+.+|+++.|.|.+.+.|.+.+.|+++|..+....+ .......+|.|.+++.+|+|.|+|.|.|..|......
T Consensus 23 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 102 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTY 102 (241)
T ss_dssp CEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEE
Confidence 456688999999999999999999999999998865432 2233455799999999999999999999999988888
Q ss_pred EEEEEeC----CceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEee----CCEEccccccccccCC-e----eecC
Q psy12060 672 RLIVLHG----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH----NGVRIGNMDLNELETP-N----INID 738 (978)
Q Consensus 672 ~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~----~g~~~~~~~~~~~~~~-~----~~~~ 738 (978)
.|.|... |......+....+..|+.+.|.|.+.+.|.+ .+.|++ +|..+........... . ....
T Consensus 103 ~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p--~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 180 (241)
T 3grw_A 103 TLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP--HIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEA 180 (241)
T ss_dssp EEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCC--EEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEE
T ss_pred EEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCC--EEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCC
Confidence 8888763 2233334556778899999999999998876 569999 7776644221100000 0 0112
Q ss_pred CceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCCCc
Q psy12060 739 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783 (978)
Q Consensus 739 ~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~ 783 (978)
...|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.+|..
T Consensus 181 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~ 225 (241)
T 3grw_A 181 DVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEE 225 (241)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC---------
T ss_pred ceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCcc
Confidence 457999999999999999999999999999999999999988754
No 243
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.82 E-value=2.1e-19 Score=181.93 Aligned_cols=193 Identities=22% Similarity=0.345 Sum_probs=145.8
Q ss_pred EeeceeeccC----CcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCe
Q psy12060 486 QAEPNFTIPL----TDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 561 (978)
Q Consensus 486 ~~~p~~~~~~----~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G 561 (978)
..+|.+...+ ....+.+|++++|.|.+.+.|.+.+.|+|+|..+...... ...........|.|.++.. +|+|
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~-~d~G 89 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRI--GGYKVRNQHWSLIMESVVP-SDKG 89 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGST--TCCEEEGGGTEEEECSCCG-GGCE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccc--cceeeecCcceEEEecCCc-ccCE
Confidence 3467665544 5677899999999999999999999999999988632110 1112222345899999986 9999
Q ss_pred EEEEEEEcCCCceeeEEEEEEEEcCC--ccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEee----CCEEecCCCcE
Q psy12060 562 MYQCRAKNQLKTRYSSAQLRVLTLKP--SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK----DGNIIGSGGRR 635 (978)
Q Consensus 562 ~Y~C~a~n~~g~~~~~~~l~v~~~~p--~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~g~~~~~~~~~ 635 (978)
.|+|.+.|..+.......+.|...++ ............+..|+.+.|.|.+.+.|.+.+.|++ +|..+..+...
T Consensus 90 ~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~ 169 (231)
T 3ojm_B 90 NYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLP 169 (231)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCB
T ss_pred EEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcc
Confidence 99999999988887778888875221 1222223345668899999999999999999999999 78776544321
Q ss_pred E--E--------eecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCce
Q psy12060 636 K--I--------FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 681 (978)
Q Consensus 636 ~--~--------~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~ 681 (978)
. . ...++|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|..
T Consensus 170 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 170 YLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp CEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred eEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 1 1 11245999999999999999999999999999999999887754
No 244
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.82 E-value=1.2e-19 Score=180.34 Aligned_cols=183 Identities=20% Similarity=0.214 Sum_probs=131.9
Q ss_pred cceeecCC--CeEEEEEeeccCCCCeeEEee---CCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeee
Q psy12060 596 SETYAGEG--GNVTIFCNPEAAPKPKFVWKK---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK 670 (978)
Q Consensus 596 ~~~~~~~g--~~~~l~C~~~~~p~~~i~W~~---~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 670 (978)
..+.+.+| ++++|.|.+.+ |.+.++|++ +|..+..+.+......+.|.|.+++.+|+|.|+|.|.|..+...+.
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~ 93 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSI 93 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECC
T ss_pred eEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEEE
Confidence 56678899 99999999986 778999987 4776666655555566789999999999999999999865444333
Q ss_pred -EEEEEEe--CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccc-c-cccCCe---eecCCceE
Q psy12060 671 -GRLIVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL-N-ELETPN---INIDGGLL 742 (978)
Q Consensus 671 -~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~-~-~~~~~~---~~~~~~~l 742 (978)
+.|.|.. +|.+....+..+.+..|+.++|.|.+.+.|.+.+.+.|+++|..+..... . ...... .....+.|
T Consensus 94 ~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L 173 (213)
T 2x1w_L 94 MYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTL 173 (213)
T ss_dssp CEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEE
T ss_pred EEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEE
Confidence 5666643 23333444455588999999999999998766677899999876432110 0 000000 01123479
Q ss_pred EEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCC
Q psy12060 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779 (978)
Q Consensus 743 ~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~ 779 (978)
.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|-
T Consensus 174 ~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 174 TIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp EESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred EECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 9999999999999999999999999999999987764
No 245
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.82 E-value=1e-19 Score=178.59 Aligned_cols=173 Identities=22% Similarity=0.377 Sum_probs=123.2
Q ss_pred CCCCcEEEEEEEeecCCCeeEEEEcC-ccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeece
Q psy12060 412 KAGDKVRLECVAFGYPVPSYNWTRRG-SPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 490 (978)
Q Consensus 412 ~~G~~~~l~C~~~g~p~~~v~W~~~~-~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 490 (978)
.+|++++|.|.+.|.|.|.|.|+++. .++............|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.
T Consensus 14 ~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 93 (202)
T 1vca_A 14 QIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPK 93 (202)
T ss_dssp ETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCS
T ss_pred cCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCC
Confidence 48999999999999999999999943 33322112223346799999999999999999999988888899999998775
Q ss_pred e-eccCCcccccCCCceeEEEEeecC-CC--CeeEEeECCEECCCCCCCCCC-CCcEEEecCEEEEEeCCCCCCCeEEEE
Q psy12060 491 F-TIPLTDKHMDNQADLTWTCEAFGV-PD--VTYSWFRNGELLNSETLPLED-QDRYFIQDNVLTIRYLNPERDPAMYQC 565 (978)
Q Consensus 491 ~-~~~~~~~~~~~g~~~~l~C~~~~~-p~--~~i~W~~~g~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~~d~G~Y~C 565 (978)
. .+.+. ..+.+|+.++|.|.+.+. |. ++|+|+|++..+......... ..........|.|..... +|.|.|+|
T Consensus 94 ~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~-d~~g~ytC 171 (202)
T 1vca_A 94 DPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIE-DIGKVLVC 171 (202)
T ss_dssp CCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGG-GTTCEEEE
T ss_pred CCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeec-cCCCeEEE
Confidence 3 22333 568899999999999875 43 479999999887532110000 000112233566776664 78999999
Q ss_pred EEEcCCCce-------eeEEEEEEEEcCC
Q psy12060 566 RAKNQLKTR-------YSSAQLRVLTLKP 587 (978)
Q Consensus 566 ~a~n~~g~~-------~~~~~l~v~~~~p 587 (978)
.|.|..+.. ..+..|.|. ++|
T Consensus 172 ~A~n~~~~~~~~~~~~~~~~~L~V~-y~P 199 (202)
T 1vca_A 172 RAKLHIDEMDSVPTVRQAVKELQVY-ISP 199 (202)
T ss_dssp EEEECSCCCTTSCSEEEEEEECCEE-CCC
T ss_pred EEEccccCCCCcceeEeeEEEEEEe-cCC
Confidence 999987752 345566665 444
No 246
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.82 E-value=2.3e-19 Score=181.60 Aligned_cols=186 Identities=22% Similarity=0.353 Sum_probs=141.9
Q ss_pred cceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCc----EEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeE
Q psy12060 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR----RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 671 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~----~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 671 (978)
....+.+|+++.|.|.+.+.|.+.+.|+++|..+....+ .......+|.|.+++.+|+|.|+|.|.|..|......
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 345688999999999999999999999999998865433 2223344699999999999999999999999988888
Q ss_pred EEEEEeCCc----eeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEee----CCEEccccccccccC----CeeecCC
Q psy12060 672 RLIVLHGPS----YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH----NGVRIGNMDLNELET----PNINIDG 739 (978)
Q Consensus 672 ~l~v~~~p~----~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~----~g~~~~~~~~~~~~~----~~~~~~~ 739 (978)
.|.|...+. .....+....+..|+.+.|.|.+.+.|.+ .+.|++ +|..+.......... .......
T Consensus 107 ~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 184 (231)
T 3ojm_B 107 HLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQP--HIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNA 184 (231)
T ss_dssp EEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCC--EEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCT
T ss_pred EEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCC--EEEEEECCCCCCccccCCCcceEeEecccccccCCc
Confidence 888876432 22223556788899999999999998876 568998 776664322111000 0112234
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCCCc
Q psy12060 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 783 (978)
Q Consensus 740 ~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~ 783 (978)
..|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.+|..
T Consensus 185 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~~ 228 (231)
T 3ojm_B 185 EVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGR 228 (231)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-----
T ss_pred cEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCcc
Confidence 67999999999999999999999999999999999999998854
No 247
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.82 E-value=6.1e-20 Score=182.36 Aligned_cols=174 Identities=13% Similarity=0.124 Sum_probs=122.3
Q ss_pred eeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEE-EeeCC--cEEEeeeeeecceeeEEEEEeecccccccC
Q psy12060 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF-VSYDG--ALYFSALEQIDAGNYSCNVQSKVSDTGRNG 381 (978)
Q Consensus 305 ~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~-~~~~~--~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 381 (978)
..+.+|+.++|.|.+. + +.+.|.|+|+|..+.... .... ....+ .|.|.+++.+|+|.|+|.+.|..+. ...+
T Consensus 18 ~~v~~G~~vtL~C~~~-~-~~~~~~W~k~g~~~~~~~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~-~~~s 93 (218)
T 1uct_A 18 PVIPLDGSVKIQCQAI-R-EAYLTQLMIIKNSTYREI-GRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYR-FRYS 93 (218)
T ss_dssp SEEETTCCEEEEECCC-T-TCSEEEEEEEETTEEEEC-SEECC----CCCEEEECSCCGGGCEEEEEEEEETTTE-EEEC
T ss_pred CccCCCCCEEEEEEcC-C-CCCEEEEEECCCcccccc-cccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCc-eeec
Confidence 4678899999999985 3 678999999987753221 1111 12345 8999999999999999999996542 2234
Q ss_pred CceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCC
Q psy12060 382 PFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVE 461 (978)
Q Consensus 382 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~ 461 (978)
..+.|.|......+.+...+ ...+.+|++++|.|.+.+.|.+.|.|+|+|..+............|.|.+++.+
T Consensus 94 ~~~~l~V~~~~~~P~i~~~p------~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~ 167 (218)
T 1uct_A 94 DTLELVVTGLYGKPFLSADR------GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLN 167 (218)
T ss_dssp CCEEEEEECSSCCCEEEESS------CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCSCCGG
T ss_pred CCEEEEEcCcccCCEEEeCC------CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEccCCcc
Confidence 45778886532222222111 135679999999997777788899999999988654333344678999999999
Q ss_pred CCeEEEEEEEeCCC-----ceEEEEEEEEEee
Q psy12060 462 DQGEYICRASNDRS-----ALESSVTISIQAE 488 (978)
Q Consensus 462 d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~ 488 (978)
|+|.|+|.|.|... ..+..+.|.|...
T Consensus 168 D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 168 VSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp GCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred cCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 99999999998642 2334566766653
No 248
>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1
Probab=99.82 E-value=2e-20 Score=175.59 Aligned_cols=119 Identities=10% Similarity=0.071 Sum_probs=106.1
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.||.+|..++++||+++... ++|.+|+.+|+.+||+||+|++++|++||.+++. ..+|||+.+...++.|.|.|
T Consensus 46 ~~~~~~~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WIGl~d~~~~g~w~W~d 119 (168)
T 1buu_A 46 HAFSMGKKSGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK-----TSAFLGITDEVTEGQFMYVT 119 (168)
T ss_dssp HHHHTTCCTTSCEEEEEEEE-ECHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHC-----SCEECSEECSSSTTCCEETT
T ss_pred ccCCCeEEECCEEEEEeCCc-cCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHHhc-----CCEEeeeecCCcCCCEEeCC
Confidence 69999999999999999984 9999999999999999999999999999998873 67899999988899999999
Q ss_pred CCCCCcccccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 108 GTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|+++.+ ..|.+++|++ +.++|+.+... + .|.+..|.....|+|+.
T Consensus 120 G~~~~y--~~W~~geP~~~~~~e~Cv~~~~~-g----~W~d~~C~~~~~~ICe~ 166 (168)
T 1buu_A 120 GGRLTY--SNWKKDEPNDHGSGEDCVTIVDN-G----LWNDISCQASHTAVCEF 166 (168)
T ss_dssp SSBCSC--CCBSSSSCCCTTSCCCEEEECTT-S----CEEEECTTSCEEEEEEE
T ss_pred CCCcCC--CCCCCCCCCCCCCCCCeEEECCC-C----CEEccCCCCCEEEEEEe
Confidence 999854 5688888876 46799998732 2 68999999999999997
No 249
>3g8l_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.50A {Mus musculus}
Probab=99.82 E-value=3.2e-20 Score=177.74 Aligned_cols=122 Identities=17% Similarity=0.221 Sum_probs=104.9
Q ss_pred ccccccc-cceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccE
Q psy12060 25 LELRCPQ-HWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLW 103 (978)
Q Consensus 25 ~~~~Cp~-~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w 103 (978)
.+..||+ +|..|+++||+|+... ++|.+|+.+|+.+||+||+|++++|++||..++. ...+||||.+...++.|
T Consensus 62 ~~~~Cp~~gW~~~~~~CY~~~~~~-~tw~~A~~~C~~~g~~LasI~s~~e~~fl~~~~~----~~~~WIGl~~~~~~~~w 136 (190)
T 3g8l_A 62 HTGRGFEKYWFCYGIKCYYFVMDR-KTWSGCKQTCQISSLSLLKIDNEDELKFLKLLVP----SDSYWIGLSYDNKKKDW 136 (190)
T ss_dssp STTCEEEEEEEEEETEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHSC----SSCEEEEEEEETTTTEE
T ss_pred CCCCCCCCCcEEECCEEEEEEccc-CCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhhC----cCCEEEEEEcCCCCCce
Confidence 4567999 9999999999999995 9999999999999999999999999999998874 35789999999889999
Q ss_pred EEcCCCCCCcccccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 104 VNEDGTNLNELDAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 104 ~w~dg~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.|.||+++.+ ..|.+++ ....++|+.+... .|.+..|.....|+|+..
T Consensus 137 ~W~DGs~~~~--~~~~~~~-~~~~~~Cv~l~~~------~W~d~~C~~~~~fICek~ 184 (190)
T 3g8l_A 137 AWINNGPSKL--ALNTMKY-NIRDGGCMLLSKT------RLDNDNCDKSFICICGKR 184 (190)
T ss_dssp EETTTBCCCC--CCCGGGC-CGGGCSEEEECSS------CEEEECTTSCEEEEEEEE
T ss_pred EeCCCCcccc--cccCCCC-CCCCCCeEEEeCC------cEECCCCCCCeeEEEeeC
Confidence 9999998764 3455543 3457899998532 689999999999999984
No 250
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.82 E-value=1.4e-19 Score=180.75 Aligned_cols=157 Identities=24% Similarity=0.439 Sum_probs=131.1
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCce-EEEEEEEEEe
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSAL-ESSVTISIQA 487 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~ 487 (978)
..+.+|++++|.|.+.+.|.+.|.|+|++..+.... +..|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|..
T Consensus 28 ~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~ 102 (218)
T 3k0w_A 28 KAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN-----TSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCD 102 (218)
T ss_dssp EEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC-----SSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEEC
T ss_pred eEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC-----CCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEc
Confidence 356799999999999999999999999999886543 5789999999999999999999987754 4557888876
Q ss_pred e---------------ceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEE
Q psy12060 488 E---------------PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR 552 (978)
Q Consensus 488 ~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~ 552 (978)
. |.+...+....+.+|+.++|.|.+.+.|.+.+.|+++|..+... ....|.|.
T Consensus 103 ~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~------------~~~~L~i~ 170 (218)
T 3k0w_A 103 IPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE------------TKKLYMVP 170 (218)
T ss_dssp CCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC------------CSSEEEES
T ss_pred cCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC------------CCCEEEEe
Confidence 5 56666777778899999999999999999999999999988632 12478999
Q ss_pred eCCCCCCCeEEEEEEEcCCCce-eeEEEEEEE
Q psy12060 553 YLNPERDPAMYQCRAKNQLKTR-YSSAQLRVL 583 (978)
Q Consensus 553 ~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~ 583 (978)
++.. +|+|.|+|.|.|..|.. .....|.|.
T Consensus 171 ~v~~-~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 171 YVDL-EHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp SCCG-GGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred ecCh-hcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 9986 99999999999988873 344555554
No 251
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.82 E-value=5.7e-20 Score=183.29 Aligned_cols=173 Identities=21% Similarity=0.374 Sum_probs=133.1
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcCccC------------CCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCC--
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPL------------PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS-- 475 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l------------~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-- 475 (978)
.+.+|++++|.|.+.+.|.+.|.|+|++..+ ....+.......|.|.+++.+|+|.|+|.|.+..|
T Consensus 12 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~g~~ 91 (212)
T 1f97_A 12 QVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQN 91 (212)
T ss_dssp EEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEETTSSS
T ss_pred EEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEEccCCCc
Confidence 4579999999999999999999999998763 11223334458899999999999999999999876
Q ss_pred ceEEEEEEEEEeeceeeccCCcccccCCCceeEEEE-eecCCCCeeEEeECCE-ECCCCCCC--CCCCCcEEE--ecCEE
Q psy12060 476 ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCE-AFGVPDVTYSWFRNGE-LLNSETLP--LEDQDRYFI--QDNVL 549 (978)
Q Consensus 476 ~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~i~W~~~g~-~~~~~~~~--~~~~~~~~~--~~~~l 549 (978)
..+..+.|.|..+|.+...+....+.+|+.++|.|. +.+.|.+.+.|++++. .+...... .....++.. ..+.|
T Consensus 92 ~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L 171 (212)
T 1f97_A 92 YGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDL 171 (212)
T ss_dssp EEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCE
T ss_pred ccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceE
Confidence 567788999999888765555567889999999999 7888999999999999 77643210 001122322 35689
Q ss_pred EEEeCCCCCCCeEEEEEEEcCCCceee--EEEEEEE
Q psy12060 550 TIRYLNPERDPAMYQCRAKNQLKTRYS--SAQLRVL 583 (978)
Q Consensus 550 ~i~~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v~ 583 (978)
.|.++.. +|+|.|+|.|.|..|.... ...|.|.
T Consensus 172 ~i~~~~~-~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 172 IFDPVTA-FDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp EESSCCG-GGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred EEEecCh-hhCcEEEEEEccccCCccccceEEEEEE
Confidence 9999986 9999999999999998733 4455544
No 252
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.82 E-value=9.4e-20 Score=179.97 Aligned_cols=167 Identities=22% Similarity=0.325 Sum_probs=133.8
Q ss_pred CCCCCCCcEEEEEE-EeecCC-CeeEEEEcCccCCC---Cc-eeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEE---
Q psy12060 409 EAPKAGDKVRLECV-AFGYPV-PSYNWTRRGSPLPR---NA-YFENFNRILTIPNVKVEDQGEYICRASNDRSALES--- 479 (978)
Q Consensus 409 ~~v~~G~~~~l~C~-~~g~p~-~~v~W~~~~~~l~~---~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--- 479 (978)
..+.+|+.++|.|. +.+.|. +.++|+|++..+.. .. .....+..|.|.+++.+|+|.|+|.+.+..+....
T Consensus 18 ~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~ 97 (201)
T 3s97_C 18 VRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSK 97 (201)
T ss_dssp EEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECC
T ss_pred EEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhc
Confidence 45679999999999 889998 99999999988742 11 23344678999999999999999999997665543
Q ss_pred EEEEEEE-------eeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEE
Q psy12060 480 SVTISIQ-------AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR 552 (978)
Q Consensus 480 ~~~l~V~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~ 552 (978)
.+.+.+. .+|.+...+....+.+|+.++|.|.+.+.|.+.+.|++++..+. ...++....+.|.|.
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~-------~~~~~~~~~~~L~i~ 170 (201)
T 3s97_C 98 FIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMP-------STAEISTSGAVLKIF 170 (201)
T ss_dssp CEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCC-------TTCEEETTTTEEEEC
T ss_pred ccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCC-------CceeecCCCCEEEEc
Confidence 2344443 35666665557778999999999999999999999999998776 223444456789999
Q ss_pred eCCCCCCCeEEEEEEEcCCCceeeEEEEEEE
Q psy12060 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583 (978)
Q Consensus 553 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 583 (978)
++.. +|+|.|+|.|.|..|....+..|.|.
T Consensus 171 ~v~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 171 NIQL-EDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp SCCG-GGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCh-hhCEEEEEEEEecCCceeeeEEEEEe
Confidence 9996 99999999999999988888887775
No 253
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.82 E-value=2.8e-20 Score=178.85 Aligned_cols=170 Identities=17% Similarity=0.183 Sum_probs=126.3
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCC-eEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNP-SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQV 266 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 266 (978)
++|.|...|.+..+. +|++++|.|.+.+.|.+ .+.|+|++..+. ..+++|.|.++ +.
T Consensus 3 ~~P~i~~~p~~~~v~-----~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~----------------~~~~~L~i~~v-~~ 60 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIF-----KGENVTLTCNGNNFFEVSSTKWFHNGSLSE----------------ETNSSLNIVNA-KF 60 (176)
T ss_dssp -CCCCEEESSCSEEE-----TTCCEEEECCTTCC----CCEEEETTEECS----------------CCSSEEEECSC-CG
T ss_pred CCCEEEcCCCCccee-----cCCcEEEEEeCCCCCCcceEEEEECCeECC----------------CCceEEEEecc-ce
Confidence 457888888886554 45669999999988875 799999986432 13568999997 89
Q ss_pred CCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEE
Q psy12060 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 346 (978)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 346 (978)
+|+|.|+|.|.|..++ ..+.|.|...+ .........+.+|+.++|.|.+..+.|.+.|.|+|+|..+...
T Consensus 61 ~d~G~Y~C~~~~~~~s---~~~~l~V~~~~-~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~------ 130 (176)
T 1f2q_A 61 EDSGEYKCQHQQVNES---EPVYLEVFSDW-LLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW------ 130 (176)
T ss_dssp GGCEEEEEECTTSSCC---CCEEEEEECSS-EEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC------
T ss_pred ecCEEEEEEcCCcccc---ccEEEEEeCcc-eeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee------
Confidence 9999999999987653 45667766332 2223344577799999999998667788899999998775321
Q ss_pred EeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCC
Q psy12060 347 VSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392 (978)
Q Consensus 347 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~ 392 (978)
..++.|.|.+++.+|+|.|+|.|.|..+ ...+..+.|.|..+|
T Consensus 131 -~~~~~L~i~~v~~~d~G~Y~C~a~n~~~--~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 131 -YENHNISITNATVEDSGTYYCTGKVWQL--DYESEPLNITVIKAP 173 (176)
T ss_dssp -CCSSEEEESSCCGGGCEEEEEEEEETTE--EEECCCEEEEEECSC
T ss_pred -cCCCeEEECCCCcccCEEEEEEEEeCCc--ceEecCEEEEEecCC
Confidence 2356899999999999999999999643 234455788888765
No 254
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.82 E-value=1.6e-19 Score=177.53 Aligned_cols=161 Identities=19% Similarity=0.276 Sum_probs=126.9
Q ss_pred eeecCCCeEEEEEeeccCCCCe-eEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 598 TYAGEGGNVTIFCNPEAAPKPK-FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 598 ~~~~~g~~~~l~C~~~~~p~~~-i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
..+.+|++++|.|.+.+.|.+. +.|+++|..+.... +.|.|.+++.+|+|.|+|.|.|. .....+.|.|.
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~-------~~L~i~~v~~~D~G~Y~C~a~n~--~~s~~~~l~V~ 87 (204)
T 3sgj_C 17 YRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA-------SSYFIDAATVDDSGEYRCQTQLS--TLSDPVQLEVH 87 (204)
T ss_dssp SEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS-------SEEEESSCCGGGCEEEEEEETTS--BCCCCEEEEEE
T ss_pred eEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc-------cEEEEecccccCCEEEEEEeCCC--cccccEEEEEe
Confidence 4578999999999999988775 99999999886543 67999999999999999999874 44556788887
Q ss_pred eCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEE
Q psy12060 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756 (978)
Q Consensus 677 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 756 (978)
.+|.+... +...+..|+.++|.|.+.+.++ ...+.|+++|..+... ..+..|.|.++..+|+|.|+
T Consensus 88 ~~p~~~~~--~~~~v~~G~~v~L~C~~~~~~p-~~~v~W~k~g~~~~~~-----------~~~~~L~i~~v~~~D~G~Y~ 153 (204)
T 3sgj_C 88 IGWLLLQA--PRWVFKEEDPIHLRCHSWKNTA-LHKVTYLQNGKGRKYF-----------HHNSDFYIPKATLKDSGSYF 153 (204)
T ss_dssp CSSEEEEC--SCSEEETTCCEEEEEEEGGGCC-CEEEEEEETTEEEEEE-----------EECCCEEESSCCGGGCEEEE
T ss_pred cCceEecC--CceeEeCCCcEEEEEEecCCCC-CceEEEEECCcEeecc-----------cCCceEEECcCCcccCEEEE
Confidence 77654432 3367889999999999977643 2467999999876431 13568999999999999999
Q ss_pred EEEEc-CCCceeeeEEEEEcCCCCCC
Q psy12060 757 CVVKS-TVGKISTKTTVIVEGPPGLP 781 (978)
Q Consensus 757 c~a~n-~~G~~s~~~~l~v~~~P~~P 781 (978)
|.|.| ..+..+..+.|.|.++|.+|
T Consensus 154 C~a~n~~~~~~s~~~~l~V~~~~~~P 179 (204)
T 3sgj_C 154 CRGLVGSKNVSSETVQITITQGLAVS 179 (204)
T ss_dssp EEEEETTEEEECCCEEEEEEC-----
T ss_pred EEEEeCCCceecCcEEEEEeCcCCCC
Confidence 99999 45567788999999888776
No 255
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.82 E-value=7.9e-20 Score=176.88 Aligned_cols=158 Identities=14% Similarity=0.117 Sum_probs=116.9
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
++|.|...|.. .+ .+|++++|.|.+.+ |.+.+.|+|+|.. ....++.|.|.++ +.+
T Consensus 7 ~~P~i~~~p~~-~v-----~~G~~v~L~C~~~~-~~~~~~W~k~g~~----------------~~~~~~~L~i~~v-~~~ 62 (184)
T 2gi7_A 7 PKPSLQALPSS-LV-----PLEKPVTLRCQGPP-GVDLYRLEKLSSS----------------RYQDQAVLFIPAM-KRS 62 (184)
T ss_dssp CCCEEEEESCS-EE-----ETTCCEEEEEECST-TCSEEEEEETTTC----------------CEESSSEEEESSC-CGG
T ss_pred CCCeEEeCCCc-cc-----cCCCcEEEEEeCCC-CCCEEEEEECCcc----------------ccCcccEEEECcC-Chh
Confidence 46888888875 33 34677999999998 7789999999842 1235678999997 899
Q ss_pred CCeEEEEEEEeCcee-EEeEEEEEEEeee---cccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccc
Q psy12060 268 DRGSYHCKASNKFGS-IISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (978)
Q Consensus 268 d~G~Y~C~a~n~~g~-~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 343 (978)
|+|.|+|.|.|..|. ..+..+.|.|... |.+... +...+.+|+.++|.|.+. +. ++.+.|+|+|..+....
T Consensus 63 D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~-p~~~v~~G~~v~l~C~~~-~~-~~~~~w~k~g~~~~~~~-- 137 (184)
T 2gi7_A 63 LAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQ-PGPAVSSGGDVTLQCQTR-YG-FDQFALYKEGDPAPYKN-- 137 (184)
T ss_dssp GCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEE-CCCSSCCTTCEEEEEECS-SC-CCEEEEEECCCCTTSCC--
T ss_pred hCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeC-CCceecCCCcEEEEEEcC-CC-CcEEEEEECCCcCccee--
Confidence 999999999998874 3456677777432 122222 234566899999999974 43 46999999997754311
Q ss_pred eEEEeeCCcEEEeeeeeecceeeEEEEEeecc
Q psy12060 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 344 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
.....++.|.|.+++.+|+|.|+|.|.|..+
T Consensus 138 -~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 138 -PERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp -CCEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred -cCCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 1223456899999999999999999999764
No 256
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.82 E-value=9.2e-20 Score=178.74 Aligned_cols=183 Identities=15% Similarity=0.145 Sum_probs=126.3
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (978)
+|.|...|.. .+. +|++++|+|.+.| |.+.+.|+|+|..+....... .....+++|.|.++ +.+|
T Consensus 5 ~P~i~~~p~~-~v~-----~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~-------~~~~~~~~L~i~~v-~~~D 69 (196)
T 3p2t_A 5 KPTLWAEPGS-VIS-----WGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNP-------LEPKNKARFSIPSM-TEDY 69 (196)
T ss_dssp CCEEEEESCS-EEE-----TTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECC-------CSSSSEEEEEESSC-CGGG
T ss_pred CCEEEccCCC-cCC-----CCCcEEEEeeCCC-CCCEEEEEECCCCCccccccc-------ccCCceEEEEeccC-Cccc
Confidence 5889888887 433 4667999999998 778999999997543211000 00123568999997 8999
Q ss_pred CeEEEEEEEeCce-eEEeEEEEEEEeeec--ccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceE
Q psy12060 269 RGSYHCKASNKFG-SIISESVQLAFGFIG--EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRV 345 (978)
Q Consensus 269 ~G~Y~C~a~n~~g-~~~s~~~~l~v~~~~--~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 345 (978)
+|.|+|.|.|..| ...+..+.|.|.... +.....+...+.+|+.++|.|.+. + +++.+.|+|+|..+........
T Consensus 70 ~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~~~~~~~ 147 (196)
T 3p2t_A 70 AGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSR-S-PMDTFLLCKERAAHPLLCLRSE 147 (196)
T ss_dssp CEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEE-E-EEEEEEEEETTCCCGGGSEEEE
T ss_pred CceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecC-C-CCCEEEEEeCCCcccceeeccc
Confidence 9999999999998 345667777775432 111112223677899999999984 3 4568999999976543221111
Q ss_pred --EEeeCCcEEEeeeeeecceeeEEEEEeecccc--cccCCceeEEE
Q psy12060 346 --FVSYDGALYFSALEQIDAGNYSCNVQSKVSDT--GRNGPFFPLKV 388 (978)
Q Consensus 346 --~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~--~~~~~~~~l~V 388 (978)
....++.|.|.+++.+|+|.|+|.|.|..+.. ...+..+.|.|
T Consensus 148 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 194 (196)
T 3p2t_A 148 HGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIV 194 (196)
T ss_dssp EEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEE
T ss_pred ccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEe
Confidence 12345679999999999999999999987532 22344456655
No 257
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.82 E-value=6e-20 Score=180.40 Aligned_cols=184 Identities=14% Similarity=0.149 Sum_probs=122.0
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
++|.|...|.. .+ .+|++++|.|.+.|.|. .+.|+|+|..+.... ........++.|.|.++ +.+
T Consensus 4 ~~P~i~~~p~~-~v-----~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~-------~~~~~~~~~~~L~i~~v-~~~ 68 (198)
T 1ugn_A 4 PKPTLWAEPGS-VI-----TQGSPVTLRCQGGQETQ-EYRLYREKKTAPWIT-------RIPQELVKKGQFPIPSI-TWE 68 (198)
T ss_dssp CCCEEEEESCS-EE-----ETTCCEEEEEECCTTCC-CEEEEESSSCCHHHH-------TSCHHHHTTTEEEESSC-CGG
T ss_pred CCCeEeccCCC-cc-----cCCCcEEEEEEecCCCc-EEEEEECCccccccc-------cccccCCcccEEEECCC-CHH
Confidence 35888888875 33 34677999999998875 799999997542110 00111234578999997 899
Q ss_pred CCeEEEEEEEeCc-ee-EEeEEEEEEEeeec--ccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccc
Q psy12060 268 DRGSYHCKASNKF-GS-IISESVQLAFGFIG--EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (978)
Q Consensus 268 d~G~Y~C~a~n~~-g~-~~s~~~~l~v~~~~--~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 343 (978)
|+|.|+|.|.|.. |. ..+..+.|.|...+ +.....+...+.+|+.++|.|.+.. . .+.|.|+|+|..+.... .
T Consensus 69 D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~-~-~~~v~W~k~g~~~~~~~-~ 145 (198)
T 1ugn_A 69 HTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQV-A-FDGFILCKEGEDEHPQC-L 145 (198)
T ss_dssp GCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSS-C-CSEEEEEEC------CE-E
T ss_pred HCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCC-C-CcEEEEEECCCccCCcc-c
Confidence 9999999999987 63 34567778776622 1111122356788999999999954 4 67999999997753221 1
Q ss_pred eEEEee----CCcEEEeeeeeecceeeEEEEEeeccccc--ccCCceeEEEc
Q psy12060 344 RVFVSY----DGALYFSALEQIDAGNYSCNVQSKVSDTG--RNGPFFPLKVF 389 (978)
Q Consensus 344 ~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~--~~~~~~~l~V~ 389 (978)
+..... .+.|.|.+++.+|+|.|+|.|.|..+... ..+..+.|.|.
T Consensus 146 ~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 146 NSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred cccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 111111 35799999999999999999999865322 23445666663
No 258
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.82 E-value=2.1e-19 Score=183.17 Aligned_cols=170 Identities=22% Similarity=0.385 Sum_probs=135.9
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCc-----eeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNA-----YFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~-----~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 483 (978)
..+.+|++++|.|.+.|.|.+.|.|+|++..+.... ........|.|.+++.+|+|.|+|.+.|..|.....+.|
T Consensus 25 ~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l 104 (241)
T 3grw_A 25 LAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 104 (241)
T ss_dssp EEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEE
Confidence 356799999999999999999999999999886433 233456789999999999999999999999988888899
Q ss_pred EEEee----ceee-ccCCcccccCCCceeEEEEeecCCCCeeEEeE----CCEECCCCCCCCCCCCcEE----------E
Q psy12060 484 SIQAE----PNFT-IPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYF----------I 544 (978)
Q Consensus 484 ~V~~~----p~~~-~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~----~g~~~~~~~~~~~~~~~~~----------~ 544 (978)
.|... |.+. ..+....+.+|+.++|.|.+.+.|.+.+.|++ +|..+.... ..... .
T Consensus 105 ~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~ 179 (241)
T 3grw_A 105 DVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDG-----TPYVTVLKSWISESVE 179 (241)
T ss_dssp EEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTT-----CCCEEEEEEEECSBSE
T ss_pred EEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCC-----ceeeeeeeEeeeeecC
Confidence 88763 3332 24556678899999999999999999999999 777665321 11111 1
Q ss_pred ecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEE
Q psy12060 545 QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584 (978)
Q Consensus 545 ~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 584 (978)
....|.|.++.. +|+|.|+|.|.|..|....+..|.|..
T Consensus 180 ~~~~L~i~~~~~-~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 218 (241)
T 3grw_A 180 ADVRLRLANVSE-RDGGEYLCRATNFIGVAEKAFWLSVHG 218 (241)
T ss_dssp EEEEEEECSCCG-GGCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred CceEEEECcCCc-ccCcEEEEEEecCcceEEEEEEEEecC
Confidence 234799999986 899999999999999998888888875
No 259
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.82 E-value=1.2e-19 Score=180.38 Aligned_cols=177 Identities=17% Similarity=0.160 Sum_probs=123.0
Q ss_pred Ceeeecc--cCeEEEeCCCCCCCCceEEEecc---cccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeeccccc
Q psy12060 304 PEIGNQN--WGKAMFCDPPTNYPGVNYYWARD---YFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTG 378 (978)
Q Consensus 304 ~~~~~~~--~~~~l~C~~~~~~p~~~i~W~~~---~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~ 378 (978)
...+.+| +.++|.|.+. + |.+.+.|+|+ +..+ ....++.....+.|.|.+++.+|+|.|+|.|.|..+ .
T Consensus 16 ~v~v~eG~~~~v~L~C~~~-~-p~~~v~w~~~~~~g~~~--~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~--~ 89 (213)
T 2x1w_L 16 VVYITENKNKTVVIPCLGS-I-SNLNVSLCARYPEKRFV--PDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDE--S 89 (213)
T ss_dssp EEEECCSTTCEEEECCCBS-S-TTCCEEEEEETTTEEEC--CCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC------C
T ss_pred EEEEecCCCccEEEeeccC-C-CCcEEEEEhhcCCCccc--cCCCcccccCCccEEEccCChhcCceEEEEEEECCe--e
Confidence 4456778 8999999984 4 7789999885 5432 233445555667899999999999999999998543 2
Q ss_pred ccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCC--CeeEEEEcCccCCCCce-e---------
Q psy12060 379 RNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPV--PSYNWTRRGSPLPRNAY-F--------- 446 (978)
Q Consensus 379 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~--~~v~W~~~~~~l~~~~~-~--------- 446 (978)
..+..+.|.|..... +.+...+. ....+.+|++++|.|.+.|.|. +.|.|++++..+..... .
T Consensus 90 ~~s~~~~l~v~~~~~-p~~~~~~~----~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~ 164 (213)
T 2x1w_L 90 YQSIMYIVVVVGYRI-YDVVLSPS----HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGS 164 (213)
T ss_dssp EECCCEEEEECBCCE-EEEEEESC----SCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSC
T ss_pred EEEEEEEEEEeCCcc-cceEEcCC----CCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCc
Confidence 233346777754211 11111110 1125679999999999998553 57999999987643211 0
Q ss_pred --eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeecee
Q psy12060 447 --ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNF 491 (978)
Q Consensus 447 --~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 491 (978)
.....+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++|.+
T Consensus 165 ~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 165 EMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp SCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred cceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 122457999999999999999999999999999999999998865
No 260
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.81 E-value=8.8e-21 Score=228.84 Aligned_cols=234 Identities=14% Similarity=0.098 Sum_probs=167.0
Q ss_pred CceEEEeccCCCCCEEEEEEE-EcCCCc----eeeeEEEEE---cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCcee
Q psy12060 739 GGLLEITNASFADAGEYECVV-KSTVGK----ISTKTTVIV---EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 810 (978)
Q Consensus 739 ~~~l~i~~~~~~d~g~Y~c~a-~n~~G~----~s~~~~l~v---~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~ 810 (978)
...+.|.++.+...+.|+..| .|..|. ...+..+.+ .++|++|.++++...+++++.|+|.||.+.++.|++
T Consensus 548 ~~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~ 627 (897)
T 2dtg_E 548 HPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITH 627 (897)
T ss_dssp CCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSE
T ss_pred ccceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCCCeeE
Confidence 356888888888888888898 888875 222222333 347889999999999999999999999888889999
Q ss_pred EEEEEeecccc-----------------------------------------------------------------CceE
Q psy12060 811 YKIIARTNWNS-----------------------------------------------------------------TWFN 825 (978)
Q Consensus 811 Y~v~~~~~~~~-----------------------------------------------------------------~w~~ 825 (978)
|.|+|+..... .|..
T Consensus 628 Y~V~~~~~~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~ 707 (897)
T 2dtg_E 628 YLVFWERQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFED 707 (897)
T ss_dssp EECCEEEECCCCSCTTCSSSCSCCCCCC----------------------------------------------------
T ss_pred EEEEEEECCCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEE
Confidence 99998764321 0110
Q ss_pred ecccccc-e----------------------eeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCC---CCCCCCCC
Q psy12060 826 VSEHVIG-K----------------------EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP---SSPSPQYN 879 (978)
Q Consensus 826 ~~~~~~~-~----------------------~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~---s~~~~~~~ 879 (978)
....... . .+........+++.+ |.|++.|.|+|.|.|..|.|++ +... .++
T Consensus 708 ~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~g-L~p~t~Y~~~V~A~n~~G~g~~~s~s~~v-~~~ 785 (897)
T 2dtg_E 708 YLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISG-LRHFTGYRIELQACNQDTPEERCSVAAYV-SAR 785 (897)
T ss_dssp ----------------------------CCSCSCEECSCSEEEECS-SCSSCEEEECCEEESCSSSSCCBCCCCCE-EEE
T ss_pred ccCceEEccCCCcccccccccccccCccccceEEecCCceEEEECC-CCCCcEEEEEEEEEeCCCCCCCCCCCcee-EEe
Confidence 0000000 0 000112346889999 9999999999999999998875 2222 455
Q ss_pred CCC-CCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCcee
Q psy12060 880 TPA-DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958 (978)
Q Consensus 880 t~~-~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 958 (978)
|.+ ..|+.+|.++.+...+.++|.|+|++ |...||.|++|+|+|+..+. ++....+..........+.|.+|.|+
T Consensus 786 T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~--P~~~nG~I~~Y~V~y~~~~~-~~~~~~~~~~~~~~~~~~~l~~L~pg- 861 (897)
T 2dtg_E 786 TMPEAKADDIVGPVTHEIFENNVVHLMWQE--PKEPNGLIVLYEVSYRRYGD-EELHLCDTRKHFALERGCRLRGLSPG- 861 (897)
T ss_dssp CCCCCCCCCCCCCCCCCSSSSSCCCCCCCC--CCSCSSCEEEECCCCBSSSB-CCCCCCCCSSSCCCTTCCCCCSCCSS-
T ss_pred ccCccCCCCCCcceEEEeCCCCEEEEEECC--CCCCCCCEEEEEEEEEECCC-cceEEEEeeeeecccCcEEECCCCCC-
Confidence 655 34568899999999999999999998 45789999999999988765 33211111100111123669999999
Q ss_pred eEEEEEEEecCCCCCCCCCC
Q psy12060 959 EYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 959 ~Y~~~V~A~n~~G~gp~S~~ 978 (978)
.|.|+|+|+|.+|.||+|++
T Consensus 862 tY~~rV~A~n~~G~G~~S~~ 881 (897)
T 2dtg_E 862 NYSVRIRATSLAGNGSWTEP 881 (897)
T ss_dssp EECCCCCEEETTBCCCCCCC
T ss_pred cEEEEEEEEeCCcccCCCCC
Confidence 59999999999999999974
No 261
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.81 E-value=2.4e-21 Score=208.97 Aligned_cols=201 Identities=15% Similarity=0.180 Sum_probs=155.2
Q ss_pred CCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCc
Q psy12060 462 DQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDR 541 (978)
Q Consensus 462 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~ 541 (978)
|.|.|+|.+.+.... +.+.+..+|.+...+....+.+|++++|.|.+.|.|.+.+.|++++..+.... ...
T Consensus 136 ~~~~~~C~~~~~l~~----l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~-----~~~ 206 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAH----MPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATV-----MKS 206 (347)
T ss_dssp GGGCCCCSSSSCSSC----CCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEE-----CCC
T ss_pred cccCCCCCCChHHhc----CCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccc-----ccc
Confidence 578899988763221 12234457888877888889999999999999999999999999887654211 111
Q ss_pred EEEecCEEEEEeCCCCCCCe-EEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCee
Q psy12060 542 YFIQDNVLTIRYLNPERDPA-MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 620 (978)
Q Consensus 542 ~~~~~~~l~i~~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i 620 (978)
.....+.|.|.++.. +|+| .|+|.|.|..|.....+.+.|.. +|.+. ...+..|+.++|.|.+.|.|.|.|
T Consensus 207 ~~~~~~~L~i~~v~~-~D~G~~Y~C~a~n~~g~~~~~~~l~V~~-~P~i~------~~~~~~g~~v~l~C~~~g~P~p~i 278 (347)
T 2ifg_A 207 GGLPSLGLTLANVTS-DLNRKNVTCWAENDVGRAEVSVQVNVSF-PASVQ------LHTAVEMHHWCIPFSVDGQPAPSL 278 (347)
T ss_dssp CCSSEEEEEEESCCS-TTTTCCEEECCEETTEECCEEECCCCBE-EEEEE------ECCCEESSSEEEEEEEEEESCCEE
T ss_pred eecccceEEEeeCCh-HHCCCeEEEEEEcCCCCEEEEEEEEEcC-CCeee------eccCccCceEEEEEEeeecCCCcE
Confidence 122345899999996 9999 99999999988887777777653 44431 112457899999999999999999
Q ss_pred EEeeCCEEecCCCcEEEe----------ecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCC
Q psy12060 621 VWKKDGNIIGSGGRRKIF----------ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679 (978)
Q Consensus 621 ~W~~~g~~~~~~~~~~~~----------~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 679 (978)
+|+++|..+..+...... ..++|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 279 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 279 RWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred EEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 999999998866543321 24569999999999999999999999999999888886654
No 262
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=1.8e-19 Score=175.02 Aligned_cols=180 Identities=12% Similarity=0.082 Sum_probs=124.4
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVED 268 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 268 (978)
+|.|...|.. .+ .+|++|+|+|.+.+. ++.+.|+|+|..+.... ........++.|.|.++ +.+|
T Consensus 4 ~P~i~~~p~~-~v-----~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~-------~~~~~~~~~~~L~I~~v-~~~D 68 (188)
T 1oll_A 4 KPFIWAEPHF-MV-----PKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDR-------PKPPERINKVKFYIPDM-NSRM 68 (188)
T ss_dssp CCEEEEESCS-EE-----ETTCCEEEEEECCTT-CCEEEEEETTEEEEEEC-------CSSCTTCCEEEEEESSC-CGGG
T ss_pred CCEEEeecCC-cC-----CCCCCEEEEEecCCC-CCEEEEEECCCcccccc-------cccCCCcceeEEEeCcC-Cccc
Confidence 5888888877 33 346779999999864 47999999987543110 00111224568999997 8999
Q ss_pred CeEEEEEEEeCcee-EEeEEEEEEEee---ecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccce
Q psy12060 269 RGSYHCKASNKFGS-IISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKR 344 (978)
Q Consensus 269 ~G~Y~C~a~n~~g~-~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~ 344 (978)
+|.|+|.|.|..|. ..+..+.|.|.. .|.+... +...+.+|+.++|.|.+. + +++.+.|+|+|..+.. ..
T Consensus 69 ~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~-p~~~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~---~~ 142 (188)
T 1oll_A 69 AGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVH-PGPEVISGEKVTFYCRLD-T-ATSMFLLLKEGRSSHV---QR 142 (188)
T ss_dssp CEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEE-SCSEEETTCEEEEEEECS-S-SCSEEEEEEESSSCEE---EE
T ss_pred CeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEEC-CCCccccCCEEEEEEEcC-C-CCCEEEEEECCccccc---cc
Confidence 99999999987653 335667777753 2222222 234678899999999974 3 4568999999976532 11
Q ss_pred EEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEc
Q psy12060 345 VFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (978)
Q Consensus 345 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~ 389 (978)
.....++.|.|.+++.+|+|.|+|.|.|........+..+.|.|.
T Consensus 143 ~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 143 GYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred cCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 122334679999999999999999999875322334555777664
No 263
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.81 E-value=5.6e-20 Score=180.20 Aligned_cols=161 Identities=14% Similarity=0.131 Sum_probs=105.7
Q ss_pred eeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCce
Q psy12060 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFF 384 (978)
Q Consensus 305 ~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~ 384 (978)
..+.+|+.++|.|.+. +.|. .|.|+|++..+............++.|.|.+++.+|+|.|+|.|.|..+.. ..+..+
T Consensus 14 ~~v~~G~~v~L~C~~~-~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~~s~~~ 90 (196)
T 2d3v_A 14 SVISRGNSVTIRCQGT-LEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWS-EPSDPL 90 (196)
T ss_dssp SEEETTCCEEEEEECC-TTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEEC-BCCCCE
T ss_pred CcccCCCeEEEEEeCC-CCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcC-CcCccE
Confidence 3678899999999984 4454 999999997753221111111233579999999999999999998875432 223447
Q ss_pred eEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCcee---e---ecccEEEeCCC
Q psy12060 385 PLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF---E---NFNRILTIPNV 458 (978)
Q Consensus 385 ~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~---~---~~~~~L~i~~~ 458 (978)
.|.|...+..+.+...+ ...+.+|++++|.|.+.+.| +.|+|+|++..+...... . .....|.|.++
T Consensus 91 ~l~V~~~~~~p~i~~~~------~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v 163 (196)
T 2d3v_A 91 ELVVTGFYNKPTLSALP------SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPV 163 (196)
T ss_dssp EEEEECSSCCCEEEC-----------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCC
T ss_pred EEEecCCCCCCeEEccC------CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeec
Confidence 78887643222222211 13567999999999999988 899999999887532211 1 12378999999
Q ss_pred CCCCCeEEEEEEEeCCC
Q psy12060 459 KVEDQGEYICRASNDRS 475 (978)
Q Consensus 459 ~~~d~G~Y~C~a~n~~g 475 (978)
+.+|+|.|+|.|.|..+
T Consensus 164 ~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 164 TPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp BTTBCEEEEEEEEETTE
T ss_pred CcccCeeEEEEEEccCC
Confidence 99999999999999764
No 264
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.81 E-value=6.9e-19 Score=175.33 Aligned_cols=171 Identities=22% Similarity=0.298 Sum_probs=137.5
Q ss_pred ecCCCeEEEEEeeccC-CCCeeEEeeCCEEecCCCcEEEeecCc---EEEccccCCCCEEEEEEEEeCCceeeeeEEEEE
Q psy12060 600 AGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIGSGGRRKIFENGN---LLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675 (978)
Q Consensus 600 ~~~g~~~~l~C~~~~~-p~~~i~W~~~g~~~~~~~~~~~~~~~~---l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 675 (978)
...++.+.|.|.+.+. |.+.++|+++|..+....++.+...+. |.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v 93 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG 93 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEE
Confidence 3467888999998885 478999999999998877776655443 999999999999999999999888777777655
Q ss_pred Ee--------------------CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCee
Q psy12060 676 LH--------------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735 (978)
Q Consensus 676 ~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~ 735 (978)
.. .|.+....+....+..|+.+.|.|.+.+.|.|. +.|++++..+..... ..+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~--v~W~~~~~~~~~~~~-----~~~ 166 (212)
T 2r15_A 94 QAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPE--VSWLKNEKALAQTDH-----CNL 166 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCE--EEEEETTEEECCCSS-----EEE
T ss_pred eeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCce--EEEEECCeECccCCC-----EEE
Confidence 42 455555556677899999999999999988765 699999998865321 122
Q ss_pred ecC---CceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCC
Q psy12060 736 NID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 777 (978)
Q Consensus 736 ~~~---~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~ 777 (978)
... ...|.|.++..+|+|.|+|.|.|..|..+..+.|.|..|
T Consensus 167 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 167 KFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp EEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 211 248999999999999999999999999999999988743
No 265
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.81 E-value=6.7e-19 Score=172.68 Aligned_cols=178 Identities=16% Similarity=0.157 Sum_probs=129.2
Q ss_pred eecCCCeEEEEEeeccCCCCeeEEeeCC-EEecCCCcEEE-eecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 599 ~~~~g~~~~l~C~~~~~p~~~i~W~~~g-~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
.+.+|++++|.|.+.|.|.|.+.|++.. ..+ ...... ...+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 12 ~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~ 89 (202)
T 1vca_A 12 LAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIY 89 (202)
T ss_dssp EEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEE
Confidence 3558999999999999999999999843 211 111111 123469999999999999999999999988888899998
Q ss_pred eCCceeeeCCCceEEEccccEEEEEEeeecCC-cCeEEEEeeCCEEccccccccccCCe-eecCCceEEEeccCCCCCEE
Q psy12060 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVAYIWTHNGVRIGNMDLNELETPN-INIDGGLLEITNASFADAGE 754 (978)
Q Consensus 677 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~~~W~~~g~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~ 754 (978)
.+|..+...+. ..+..|+.++|.|.+.+.++ +.++|.|++++..+............ .......|.|.....+|.|.
T Consensus 90 ~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ 168 (202)
T 1vca_A 90 SFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKV 168 (202)
T ss_dssp BCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCE
T ss_pred eCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCe
Confidence 87765443333 56889999999999998654 34788999999887542211000000 01112356788788888999
Q ss_pred EEEEEEcCCCc-------eeeeEEEEEcCCCC
Q psy12060 755 YECVVKSTVGK-------ISTKTTVIVEGPPG 779 (978)
Q Consensus 755 Y~c~a~n~~G~-------~s~~~~l~v~~~P~ 779 (978)
|+|+|.|..|. .+.++.|.|..||.
T Consensus 169 ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 169 LVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp EEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred EEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 99999999886 34567888887775
No 266
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.81 E-value=5.3e-20 Score=189.16 Aligned_cols=204 Identities=18% Similarity=0.267 Sum_probs=119.2
Q ss_pred CCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCC-----CCeeEEeEC--CEECC
Q psy12060 458 VKVEDQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVP-----DVTYSWFRN--GELLN 530 (978)
Q Consensus 458 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~--g~~~~ 530 (978)
++.+|+|.|+|.|. |.....+.+.+..++.+...+....+.+|++++|.|.+.+.| .+.|.|+|+ |..+.
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~ 87 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPK 87 (254)
T ss_dssp ------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCce
Confidence 67899999999998 554455555566677777777788899999999999999887 489999984 32221
Q ss_pred C-----CCCCCCCCCcEEEe-c---CEEEEEeCCCCCCCeEEEEEEEcCCCceee-EEEEEEEE--cCCccccCCCCcce
Q psy12060 531 S-----ETLPLEDQDRYFIQ-D---NVLTIRYLNPERDPAMYQCRAKNQLKTRYS-SAQLRVLT--LKPSFKKRPLESET 598 (978)
Q Consensus 531 ~-----~~~~~~~~~~~~~~-~---~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~--~~p~~~~~~~~~~~ 598 (978)
. .........++.+. . ..|.|.++.. +|+|.|+|.|.|..+.... ...+.|.. .+|.+...+....
T Consensus 88 ~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~- 165 (254)
T 2c1o_A 88 RLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEA-EDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSE- 165 (254)
T ss_dssp EEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHH-
T ss_pred EEEEeccccCCCccceEEEecCCCEEEEEECcCCc-ccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChh-
Confidence 0 00000112444432 1 2799999997 9999999999987654322 23455542 2354443222111
Q ss_pred eecCCCeEEEEEeeccC-CC-CeeEEeeCCEEecCCCcE--E--------EeecCcEEEccccCCCCEEEEEEEEeCCce
Q psy12060 599 YAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGGRR--K--------IFENGNLLISPVSRDDSGIYSCTATNVHGM 666 (978)
Q Consensus 599 ~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~--~--------~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 666 (978)
...|+.++|.|.+.+. |+ +.++|+++|..+..+... . ....+.|.|.++..+|+|.|+|.|.|....
T Consensus 166 -~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 166 -QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp -HHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred -hccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 2357899999999884 44 479999999988665111 0 111235999999999999999999998765
Q ss_pred e
Q psy12060 667 D 667 (978)
Q Consensus 667 ~ 667 (978)
.
T Consensus 245 ~ 245 (254)
T 2c1o_A 245 S 245 (254)
T ss_dssp S
T ss_pred C
Confidence 4
No 267
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=178.12 Aligned_cols=160 Identities=14% Similarity=0.169 Sum_probs=115.3
Q ss_pred eeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCcee
Q psy12060 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385 (978)
Q Consensus 306 ~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~ 385 (978)
.+.+|+.++|.|.+. + |.+.+.|+|++..+.............+.|.|.+++.+|+|.|+|.|.|..+.. ..+..+.
T Consensus 15 ~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~~s~~~~ 91 (196)
T 3p2t_A 15 VISWGNSVTIWCQGT-L-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWS-QPSDPLE 91 (196)
T ss_dssp EEETTCCEEEEEECC-T-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEB-CCCCCEE
T ss_pred cCCCCCcEEEEeeCC-C-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCccc-CCCccEE
Confidence 678899999999984 4 678999999998754321111001233579999999999999999999987521 2344577
Q ss_pred EEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCce-----eeecccEEEeCCCCC
Q psy12060 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY-----FENFNRILTIPNVKV 460 (978)
Q Consensus 386 l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~-----~~~~~~~L~i~~~~~ 460 (978)
|.|...+..+.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|++..+..... .......|.|.+++.
T Consensus 92 l~V~~~~~~p~~~~~~~------~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 164 (196)
T 3p2t_A 92 LVMTGAYSKPTLSALPS------PLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTS 164 (196)
T ss_dssp EEEECSSCCCEEEEESC------SEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCG
T ss_pred EEecCCCCCCEEEeCCc------ceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEEeCCCcc
Confidence 88865432222222111 246799999999999884 458999999987754321 123457899999999
Q ss_pred CCCeEEEEEEEeCCC
Q psy12060 461 EDQGEYICRASNDRS 475 (978)
Q Consensus 461 ~d~G~Y~C~a~n~~g 475 (978)
+|+|.|+|.|.|..+
T Consensus 165 ~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 165 VHGGTYRCFSSHGFS 179 (196)
T ss_dssp GGCEEEEEEEECGGG
T ss_pred cCCCeEEEEEEcCCC
Confidence 999999999999865
No 268
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=2.4e-19 Score=173.99 Aligned_cols=163 Identities=20% Similarity=0.423 Sum_probs=128.1
Q ss_pred CCCCCCCcEEEEEEEeecCCC--eeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~--~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 486 (978)
..+.+|++++|.|.+.+.|.| .+.|+|++..+...... .....|.|. +.+|+|.|+|.|.|. ....+.|.|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-~~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l~V~ 81 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-GQKTEFKVD--SDDQWGEYSCVFLPE---PMGTANIQLH 81 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-CSEEEEEEC--GGGCCEEEEEEEEST---TSCEEEEEEC
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-CCcEEEEEe--chhhCeEEEEEEECC---cCcEEEEEEe
Confidence 355789999999999987777 89999999888655432 224467777 689999999999983 2356788899
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCC-CCeeEEeE---CCE-ECCCCCCCCCCCCcEEEe-c---CEEEEEeCC-C
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVP-DVTYSWFR---NGE-LLNSETLPLEDQDRYFIQ-D---NVLTIRYLN-P 556 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~---~g~-~~~~~~~~~~~~~~~~~~-~---~~l~i~~~~-~ 556 (978)
.+|.+...+....+.+|++++|.|.+.|.| .+.+.|++ ++. .+... ...++.+. . ..|.|.++. .
T Consensus 82 ~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~L~i~~v~~~ 156 (184)
T 3b5h_A 82 GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNG-----SESRFFVSSSQGRSELHIENLNME 156 (184)
T ss_dssp CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTT-----GGGTEEEEEETTEEEEEECSCCTT
T ss_pred cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecC-----CCCEEEEEecCCeeEEEEeecccc
Confidence 999988877777789999999999999998 89999999 444 33311 12344332 1 279999998 7
Q ss_pred CCCCeEEEEEEEcCCCceeeEEEEEEE
Q psy12060 557 ERDPAMYQCRAKNQLKTRYSSAQLRVL 583 (978)
Q Consensus 557 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 583 (978)
+|+|.|+|.|.|..|.......|.|.
T Consensus 157 -~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 157 -ADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp -TSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred -ccCceEEEEEEeCCCcceEEEEEEEe
Confidence 89999999999999988887777764
No 269
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.80 E-value=3.1e-19 Score=178.22 Aligned_cols=174 Identities=16% Similarity=0.259 Sum_probs=129.2
Q ss_pred CeeeecccCeEEEeCCCCCCC----CceEEEeccccc----------------cc---ccccceEEEee------CCcEE
Q psy12060 304 PEIGNQNWGKAMFCDPPTNYP----GVNYYWARDYFP----------------NF---VEEDKRVFVSY------DGALY 354 (978)
Q Consensus 304 ~~~~~~~~~~~l~C~~~~~~p----~~~i~W~~~~~~----------------~~---~~~~~~~~~~~------~~~L~ 354 (978)
...+.+|+.++|.|.+. +.| .+.|.|+|++.. .. .....++.+.. +++|.
T Consensus 9 ~v~v~~G~~v~L~C~~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 9 RIEKAKGETAYLPCKFT-LSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEETTSCEEECCBCC-CCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred eEEEecCCCEEEEEEEe-cCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 34577899999999984 344 469999985321 10 01134444443 46799
Q ss_pred EeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEE-eecCCCeeEE
Q psy12060 355 FSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNW 433 (978)
Q Consensus 355 i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~v~W 433 (978)
|.+++.+|+|.|+|.+.|..+.. ...+.|.|..+|....... ...+.+|+.++|.|.+ .|.|.+.|+|
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~---~~~~~l~V~~~p~~~~~~~--------~~~~~~g~~v~l~C~~~~g~p~~~v~W 156 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVA---NKKFLLTVLVKPSGTRCFV--------DGSEEIGNDFKLKCEPKEGSLPLQFEW 156 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEE---EEEEEEEEECCCBSCEEEE--------ESCCBTTCCEEEEEECSBCCSSCEEEE
T ss_pred EccCChhhCeEEEEEEEeCCCcc---ccEEEEEEEcCCCCceeee--------ecceecCCcEEEEecCCCCCCCCEEEE
Confidence 99999999999999999876532 3447888887765443221 1246789999999999 7999999999
Q ss_pred EEcCc--cCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeec
Q psy12060 434 TRRGS--PLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEP 489 (978)
Q Consensus 434 ~~~~~--~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 489 (978)
++++. .+.........++.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 157 QKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp EECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred EECCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 99544 443333334456799999999999999999999999999999999887543
No 270
>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A*
Probab=99.80 E-value=2e-19 Score=157.69 Aligned_cols=111 Identities=11% Similarity=0.100 Sum_probs=95.6
Q ss_pred ccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcCCCCCCccc
Q psy12060 36 YRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELD 115 (978)
Q Consensus 36 ~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~dg~~~~~~~ 115 (978)
+|++||+++... ++|.+|+..|+.+||+||+|++++|++||.+++. ..+||||.+...++.|.|.||+++.+
T Consensus 1 ig~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~-----~~~WiGl~~~~~~~~w~W~dg~~~~~-- 72 (115)
T 2msb_A 1 SGKKFFVTNHER-MPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK-----TSAFLGITDEVTEGQFMYVTGGRLTY-- 72 (115)
T ss_dssp ---CEEEEEEEE-ECHHHHHHHHHHTTCEECCCSSHHHHHHHHHHHS-----SCEEEEEECSSSTTCCEETTSSBCCS--
T ss_pred CCCEEEEEeCCC-cCHHHHHHHHHhCCCEEeccCCHHHHHHHHHhhc-----CCEEEeeEcCCCCCcEEECCCCEeee--
Confidence 478999999985 9999999999999999999999999999999883 67899999988899999999999864
Q ss_pred ccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 116 AAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 116 ~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
..|.+++|++ ..++|+.+... + .|.+..|.....|+|+.
T Consensus 73 ~~W~~~~P~~~~~~~~C~~~~~~-g----~W~~~~C~~~~~fiCe~ 113 (115)
T 2msb_A 73 SNWKKDEPNDHGSGEDCVTIVDN-G----LWNDISCQASHTAVCEF 113 (115)
T ss_dssp CCBCTTCCCCCTTCCCEEEECTT-S----CEEEECTTSCEEEEEEE
T ss_pred cCcCCCCCCCCCCCCCeEEECCC-C----CEECcCCCCCeEEEEeE
Confidence 5688888876 46799998732 1 68999999999999997
No 271
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.80 E-value=5.6e-20 Score=175.87 Aligned_cols=159 Identities=13% Similarity=0.078 Sum_probs=118.4
Q ss_pred eeecccCeEEEeCC-CCCCCCceEEEeccccccc--------ccccceEEEeeCCcEEEeeeeeecceeeEEEEEeeccc
Q psy12060 306 IGNQNWGKAMFCDP-PTNYPGVNYYWARDYFPNF--------VEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (978)
Q Consensus 306 ~~~~~~~~~l~C~~-~~~~p~~~i~W~~~~~~~~--------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 376 (978)
.+.+|+.++|.|.. +.+.|.+.|.|+|++..+. .....++.+..+++|.|.+++.+|+|.|+|.|.|..+.
T Consensus 7 ~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~ 86 (176)
T 1hng_A 7 WGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGT 86 (176)
T ss_dssp EEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTCC
T ss_pred EEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCCC
Confidence 45678999999943 3345678999999985432 22356777777889999999999999999999998764
Q ss_pred ccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeC
Q psy12060 377 TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIP 456 (978)
Q Consensus 377 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~ 456 (978)
.. ....+.|.|..++..+.+. ..+..++|.|.+.|.|.|.|+|+|++..+.... .+.|.
T Consensus 87 ~~-~~~~~~l~V~~~~~~p~i~-------------~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~-------~~~i~ 145 (176)
T 1hng_A 87 RI-LNKALDLRILEMVSKPMIY-------------WECSNATLTCEVLEGTDVELKLYQGKEHLRSLR-------QKTMS 145 (176)
T ss_dssp EE-EEEEEEEEEECCCCCCEEE-------------EETTTTEEEEECSSCSSCEEEEEETTEEEEEES-------SSEEE
T ss_pred EE-EEEEEEEEEeCCCCCCEEE-------------ecCCcEEEEEEecCCCCcEEEEEECCEECCCCC-------cEEEE
Confidence 31 1234677777654322111 235569999999999999999999998875332 24455
Q ss_pred CCCCCCCeEEEEEEEeCCCceEEEEEEEE
Q psy12060 457 NVKVEDQGEYICRASNDRSALESSVTISI 485 (978)
Q Consensus 457 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 485 (978)
++..+|+|.|+|.|.|..|..+..+.|.+
T Consensus 146 ~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 146 YQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEccCCeEEEEEEEecCCCceecccccC
Confidence 77899999999999999998887766543
No 272
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.80 E-value=3.4e-20 Score=200.01 Aligned_cols=170 Identities=18% Similarity=0.208 Sum_probs=134.4
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCce--eeecccEEEeCCCCCCCCe-EEEEEEEeCCCceEEEEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY--FENFNRILTIPNVKVEDQG-EYICRASNDRSALESSVTISI 485 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~--~~~~~~~L~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~V 485 (978)
..+.+|++++|.|.+.|.|.+.|.|++++..+..... .....++|.|.+++.+|+| .|+|.|.|..|..+..+.|.|
T Consensus 168 ~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V 247 (347)
T 2ifg_A 168 ASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNV 247 (347)
T ss_dssp SCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCC
T ss_pred eEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEE
Confidence 4678999999999999999999999999977542211 2234578999999999999 999999999998888999999
Q ss_pred EeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCC---C-CCcEEEecCEEEEEeCCCCCCCe
Q psy12060 486 QAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE---D-QDRYFIQDNVLTIRYLNPERDPA 561 (978)
Q Consensus 486 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~---~-~~~~~~~~~~l~i~~~~~~~d~G 561 (978)
..+|.+ ......+|+.++|.|.+.|.|.|.|+|+|+|..+........ . ........+.|.|.++.. +|+|
T Consensus 248 ~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~d~G 322 (347)
T 2ifg_A 248 SFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTH-VNNG 322 (347)
T ss_dssp BEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCG-GGCE
T ss_pred cCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCc-ccCc
Confidence 999886 112346789999999999999999999999999873211000 0 000001245799999986 9999
Q ss_pred EEEEEEEcCCCceeeEEEEEEE
Q psy12060 562 MYQCRAKNQLKTRYSSAQLRVL 583 (978)
Q Consensus 562 ~Y~C~a~n~~g~~~~~~~l~v~ 583 (978)
.|+|.|.|..|....++.+.|.
T Consensus 323 ~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 323 NYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp EEEEEEEETTEEEEEEEEECSC
T ss_pred eEEEEEecCCCceeeEEEEEec
Confidence 9999999999988888777765
No 273
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.80 E-value=5.4e-19 Score=175.51 Aligned_cols=177 Identities=21% Similarity=0.304 Sum_probs=130.9
Q ss_pred CeeeecccCeEEEeCCCCCCCCceEEEecccccccc-----------------cccceEEEeeCCcEEEeeeeeecceee
Q psy12060 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV-----------------EEDKRVFVSYDGALYFSALEQIDAGNY 366 (978)
Q Consensus 304 ~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~-----------------~~~~~~~~~~~~~L~i~~~~~~d~G~Y 366 (978)
+..+.+|+.++|.|.. .+.|.+.|.|+|++..... ....+..+..+++|.|.+++.+|+|.|
T Consensus 8 ~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y 86 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHN-LPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVY 86 (208)
T ss_dssp SSEEETTCCEEEEEEC-CCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEE
T ss_pred cceeecCCcEEEEEeC-CCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEE
Confidence 4567889999999996 5667889999987532110 113455666678999999999999999
Q ss_pred EEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCcee
Q psy12060 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF 446 (978)
Q Consensus 367 ~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~ 446 (978)
+|.+.+..+ +.....+.|.|..++..+.+..... .+.+|+.++|.|.+.+.| |.|.|++++..+......
T Consensus 87 ~C~~~~~~~--~~~~~~~~l~V~~~~~~p~i~~~~~-------~~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~ 156 (208)
T 3r4d_A 87 TLDMTDENY--RRTQATVRFHVHQPVTQPFLQVTNT-------TVKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERM 156 (208)
T ss_dssp EEEEECSSC--EEEEEEEEEEEECCCCCCEEEESCS-------SCCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSE
T ss_pred EEEEEcccC--ceeEEEEEEEeccCCCCCEEecCCc-------eEeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCe
Confidence 999998753 2333446788876654444433221 267999999999999876 799999999998765543
Q ss_pred e--ecccEEEeCCCCCCCCeEEEEEEEeCCCceE-EEEEEEEEeecee
Q psy12060 447 E--NFNRILTIPNVKVEDQGEYICRASNDRSALE-SSVTISIQAEPNF 491 (978)
Q Consensus 447 ~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~ 491 (978)
. ..+.+|.|.++..+|+|.|+|.|.|..|... ..++|.|..+|.+
T Consensus 157 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 157 TLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204 (208)
T ss_dssp EEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-----
T ss_pred EEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCcc
Confidence 2 3447899999999999999999999998854 4678888777654
No 274
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.80 E-value=2.1e-19 Score=176.46 Aligned_cols=172 Identities=13% Similarity=0.116 Sum_probs=116.7
Q ss_pred eeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeec-ccccccCCc
Q psy12060 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKV-SDTGRNGPF 383 (978)
Q Consensus 305 ~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~-~~~~~~~~~ 383 (978)
..+.+|+.++|.|.+. +.|. .|.|+|+|..+............++.|.|.+++.+|+|.|+|.|.|.. +.. ..+..
T Consensus 14 ~~v~~G~~v~L~C~~~-~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~-~~s~~ 90 (198)
T 1ugn_A 14 SVITQGSPVTLRCQGG-QETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRS-ESSDP 90 (198)
T ss_dssp SEEETTCCEEEEEECC-TTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEEC-CCCCC
T ss_pred CcccCCCcEEEEEEec-CCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcc-cCCcc
Confidence 3678899999999984 4454 699999997753221111112345689999999999999999999875 321 22345
Q ss_pred eeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCcee---e---ecccEEEeCC
Q psy12060 384 FPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYF---E---NFNRILTIPN 457 (978)
Q Consensus 384 ~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~---~---~~~~~L~i~~ 457 (978)
+.|.|...+..+.+...+ ...+.+|++++|.|.+.+. .+.|+|+|++..+...... . .....|.|.+
T Consensus 91 ~~l~V~~~~~~p~i~~~~------~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~ 163 (198)
T 1ugn_A 91 LELVVTGAYIKPTLSAQP------SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGP 163 (198)
T ss_dssp EEEEEECSSCCCEEEEES------CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECC
T ss_pred EEEEEcccccCCccccCC------ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecc
Confidence 788887633222222211 1356799999999999988 6799999999987433221 1 1247899999
Q ss_pred CCCCCCeEEEEEEEeCCCc-----eEEEEEEEEE
Q psy12060 458 VKVEDQGEYICRASNDRSA-----LESSVTISIQ 486 (978)
Q Consensus 458 ~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~ 486 (978)
++.+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 164 v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 164 VSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp CCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred cCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 9999999999999998653 1445666554
No 275
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.80 E-value=3.1e-19 Score=172.65 Aligned_cols=146 Identities=15% Similarity=0.204 Sum_probs=115.4
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCc--eEEEEEEEEEe
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA--LESSVTISIQA 487 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V~~ 487 (978)
.+.+|++++|.|.+.+ |.+.+.|+|++.. ....+..|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 18 ~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATG 90 (184)
T ss_dssp EEETTCCEEEEEECST-TCSEEEEEETTTC------CEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEES
T ss_pred cccCCCcEEEEEeCCC-CCCEEEEEECCcc------ccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecC
Confidence 4579999999999887 7789999999876 2234678999999999999999999998753 34457777753
Q ss_pred ---eceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEE
Q psy12060 488 ---EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 564 (978)
Q Consensus 488 ---~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~ 564 (978)
+|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+... .........|.|.++.. +|+|.|+
T Consensus 91 ~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~-------~~~~~~~~~L~i~~v~~-~D~G~Y~ 160 (184)
T 2gi7_A 91 VFAKPSLSAQP-GPAVSSGGDVTLQCQTRYG-FDQFALYKEGDPAPYK-------NPERWYRASFPIITVTA-AHSGTYR 160 (184)
T ss_dssp SSCCCEEEEEC-CCSSCCTTCEEEEEECSSC-CCEEEEEECCCCTTSC-------CCCEEEEESSSEEEETT-CCSEEEE
T ss_pred cCCCCEEEeCC-CceecCCCcEEEEEEcCCC-CcEEEEEECCCcCcce-------ecCCCceEEEEEccCCc-cCCeEEE
Confidence 45666555 4578899999999998764 4699999999877631 12233456789999997 9999999
Q ss_pred EEEEcCCC
Q psy12060 565 CRAKNQLK 572 (978)
Q Consensus 565 C~a~n~~g 572 (978)
|.|.|..+
T Consensus 161 C~a~n~~~ 168 (184)
T 2gi7_A 161 CYSFSSRD 168 (184)
T ss_dssp EEEECTTS
T ss_pred EEEEeCCC
Confidence 99999754
No 276
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.80 E-value=4.6e-19 Score=170.27 Aligned_cols=171 Identities=22% Similarity=0.325 Sum_probs=128.1
Q ss_pred EEeeceeeccCCcccccCCCceeEEEEeecCCCC-eeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEE
Q psy12060 485 IQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDV-TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 563 (978)
Q Consensus 485 V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y 563 (978)
|..+|.+...+....+.+|++++|.|.+.+.+.+ .+.|+|++..+.. ....|.|.+++. +|+|.|
T Consensus 1 v~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~-------------~~~~L~i~~v~~-~d~G~Y 66 (176)
T 1f2q_A 1 VPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE-------------TNSSLNIVNAKF-EDSGEY 66 (176)
T ss_dssp ---CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC-------------CSSEEEECSCCG-GGCEEE
T ss_pred CCCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC-------------CceEEEEeccce-ecCEEE
Confidence 3457778877777789999999999999887764 7999999998862 245899999986 999999
Q ss_pred EEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeec-cCCCCeeEEeeCCEEecCCCcEEEeecCc
Q psy12060 564 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIFENGN 642 (978)
Q Consensus 564 ~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~~~~ 642 (978)
+|.+.|..+. ....+.|. .++..... ....+.+|+.++|.|.+. +.|.+.+.|+++|..+.... ..+.
T Consensus 67 ~C~~~~~~~s--~~~~l~V~-~~~~~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~-----~~~~ 135 (176)
T 1f2q_A 67 KCQHQQVNES--EPVYLEVF-SDWLLLQA---SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY-----ENHN 135 (176)
T ss_dssp EEECTTSSCC--CCEEEEEE-CSSEEEEE---SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC-----CSSE
T ss_pred EEEcCCcccc--ccEEEEEe-CcceeecC---CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec-----CCCe
Confidence 9999986653 34556665 22322221 223477999999999995 56667999999999885332 2567
Q ss_pred EEEccccCCCCEEEEEEEEeCCce-eeeeEEEEEEeCCc
Q psy12060 643 LLISPVSRDDSGIYSCTATNVHGM-DESKGRLIVLHGPS 680 (978)
Q Consensus 643 l~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~p~ 680 (978)
|.|.++..+|+|.|+|.|.|..+. .+..+.|.|..+|.
T Consensus 136 L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 136 ISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred EEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 999999999999999999996544 44457888877664
No 277
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.80 E-value=1.1e-18 Score=182.59 Aligned_cols=182 Identities=17% Similarity=0.145 Sum_probs=138.4
Q ss_pred EEEEEcCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeecc-ccCceEecccccceeeeecCCceeeEEee
Q psy12060 770 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIEN 848 (978)
Q Consensus 770 ~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (978)
..+....+|.+|.++++...+.+++.|+|++|. +++.+|.|+|+... ...|..... ......+++.+
T Consensus 7 ~~~~~~~~p~~P~~l~~~~~~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~i~~ 74 (283)
T 1tdq_A 7 GGGGGIPVIDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGKTTFRL---------QPPLSQYSVQA 74 (283)
T ss_dssp -----CCSSCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSSCCCEEEEE---------CTTCSEEEECS
T ss_pred cccccccCCCCCcEEEEEecCCCeEEEEEECCC---CceeEEEEEEEEecCCCCcEEEEe---------CCCCCEEEecC
Confidence 344566789999999999999999999999987 56899999997643 344422211 13467789999
Q ss_pred ccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEec
Q psy12060 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928 (978)
Q Consensus 849 ~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~ 928 (978)
|.|++.|.|+|+|.|..|.|.+... .+.| ++.+|.++.+...+.++|.|+|++|. +.|.+|+|+|+..
T Consensus 75 -L~p~t~Y~~~V~a~~~~g~s~~~~~--~~~t----~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~ 142 (283)
T 1tdq_A 75 -LRPGSRYEVSISAVRGTNESDASST--QFTT----EIDAPKNLRVGSRTATSLDLEWDNSE-----AEAQEYKVVYSTL 142 (283)
T ss_dssp -CCTTCEEEEEEEEEETTEECCCEEE--EEEC----CCCCCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEET
T ss_pred -CCCCCEEEEEEEEECCCCCCCCeeE--EEEC----CCCCCCceEEEecCCCeEEEEecCCC-----CCccEEEEEEEeC
Confidence 9999999999999999998865432 3333 44678899999999999999999843 6899999999988
Q ss_pred CCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCC
Q psy12060 929 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976 (978)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S 976 (978)
+...+....+.... .....+.|.+|.|++.|.|+|+|.|..|.|+++
T Consensus 143 ~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~ 189 (283)
T 1tdq_A 143 AGEQYHEVLVPKGI-GPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPA 189 (283)
T ss_dssp TCCCCEEEEEECCS-SSEEEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred CCCcceEEECCCCC-cccceEEEecCCCCCEEEEEEEEEeCCCCCcce
Confidence 76666443332210 013457799999999999999999999998764
No 278
>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate binding, lectin, mannose, sugar BIND protein; 1.80A {Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A 3pak_A
Probab=99.79 E-value=3.8e-19 Score=163.96 Aligned_cols=122 Identities=11% Similarity=0.097 Sum_probs=106.0
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.+...+..++++||+++... ++|.+|+..|+.+||+||+|++.+|++||..++.... ..+|||+.+...++.|.|.|
T Consensus 26 ~~~~~~~~~~~~Cy~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~--~~~WIGl~~~~~~~~w~W~d 102 (148)
T 3pbf_A 26 SLQGSMLSVGDKVFSTNGQS-VNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKYN--NYVYLGMIEDQTPGDFHYLD 102 (148)
T ss_dssp HHTTSCEEETTEEEEEEEEE-ECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHT--SCEEEEEEECSSTTCEEETT
T ss_pred HHHhcceeeCCEEEEEcCCc-cCHHHHHHHHhhcCCEEeeeCCHHHHHHHHHHHHhCC--CCEEEEeEecCCCCceEeCC
Confidence 35666789999999999995 9999999999999999999999999999999886542 47899999998899999999
Q ss_pred CCCCCcccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 108 GTNLNELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|+++.+ ..|.+++|++ ..++|+.+.... .|.+..|.....|+|+.
T Consensus 103 g~~~~~--~~W~~~~P~~~~~~~Cv~~~~~g-----~W~~~~C~~~~~fICe~ 148 (148)
T 3pbf_A 103 GASVSY--TNWYPGEPRGQGKEKCVEMYTDG-----TWNDRGCLQYRLAVCEF 148 (148)
T ss_dssp SCBCCS--CCBCTTCCCSTTSCCEEEECTTS-----CEEEECSCSCEEEEEEC
T ss_pred CCCccc--CCcCCCccCcCCCCCceEECCCC-----cEecCCCCCCeeEeeeC
Confidence 999854 5688888887 478999986532 68999999999999983
No 279
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.79 E-value=1.1e-18 Score=183.12 Aligned_cols=176 Identities=17% Similarity=0.185 Sum_probs=138.9
Q ss_pred cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccc-cCceEecccccceeeeecCCceeeEEeeccCCC
Q psy12060 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 853 (978)
Q Consensus 775 ~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~ 853 (978)
..+|.+|.++++...+.+++.|+|.+| ++++.+|.|+|+.... ..|..... ......+++.+ |.|+
T Consensus 18 ~~~p~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~i~~-L~p~ 84 (290)
T 3r8q_A 18 GPAIPAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMKEINL---------APDSSSVVVSG-LMVA 84 (290)
T ss_dssp --CCCCCEEEEEEEECSSCEEEEEECC---SSCCCEEEEEEEESSSSSCCEEEEE---------CTTCCEEEECS-CCSS
T ss_pred CCCCCCCCceEEEECCCCEEEEEEeCC---CCCeeEEEEEEEeCCCCCceEEEEc---------CCCccEEEeCC-CCCC
Confidence 346888999999999999999999998 3478999999988653 44543321 13467889999 9999
Q ss_pred ceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccc
Q psy12060 854 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 933 (978)
Q Consensus 854 ~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~ 933 (978)
+.|.|+|+|.|..|.|+++.. .++|.+.+ .+|.++.+...+.++|.|+|++| +|.+.+|+|+|+..+...+
T Consensus 85 t~Y~~~V~a~~~~g~s~~s~~--~~~t~~~~--~~P~~l~~~~~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~~~ 155 (290)
T 3r8q_A 85 TKYEVSVYALKDTLTSRPAQG--VVTTLENV--SPPRRARVTDATETTITISWRTK-----TETITGFQVDAVPANGQTP 155 (290)
T ss_dssp CEEEEEEEEEETTEECCCEEE--EEECCCCC--CCCEEEEEEEECSSCEEEEEECC-----SCCCCEEEEEEEESSSCCC
T ss_pred CEEEEEEEEEeCCCCCCCcce--eEecCCCC--CCCceeEEEEcCCCeEEEEEeCC-----CCcccEEEEEEEECCCCcc
Confidence 999999999999999998753 45565433 58899999999999999999984 4789999999998775544
Q ss_pred eeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCC
Q psy12060 934 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 976 (978)
Q Consensus 934 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S 976 (978)
...... .+. ..+.|.+|.|++.|.|+|+|.|..|.|+++
T Consensus 156 ~~~~~~--~~~--~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~ 194 (290)
T 3r8q_A 156 IQRTIK--PDV--RSYTITGLQPGTDYKIYLYTLNDNARSSPV 194 (290)
T ss_dssp EEEEEC--TTC--SEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred eEEecC--CCc--cEEEECCCCCCCEEEEEEEEEeCCcccCCE
Confidence 332222 122 346799999999999999999999998864
No 280
>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A 3g84_A* ...
Probab=99.79 E-value=9.7e-20 Score=172.94 Aligned_cols=122 Identities=13% Similarity=0.143 Sum_probs=106.7
Q ss_pred cccccceeccCeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcC
Q psy12060 28 RCPQHWVQYRDSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNED 107 (978)
Q Consensus 28 ~Cp~~w~~~~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~d 107 (978)
.|+.+|..++++||+++... ++|.+|+.+|+.+||+||+|+|++|++||.+++... ...+|||+.+...++.|.|.|
T Consensus 54 ~~~~~~~~~~~~Cy~~~~~~-~~w~~A~~~C~~~gg~La~i~s~~e~~~l~~~~~~~--~~~~WIGl~~~~~~~~w~W~d 130 (177)
T 1pwb_A 54 ELFPNGQSVGEKIFKTAGFV-KPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAK--NEAAFLSMTDSKTEGKFTYPT 130 (177)
T ss_dssp HHTTTEEEETTEEEEEEEEE-EEHHHHHHHHHHTTSEECCCCSHHHHHHHHHHHHHH--TCCEECSCBCSSSTTCCBCTT
T ss_pred hcCCCeEEECCEEEEEcCCc-cCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHHhcC--CCcEEEEEeccCcCCceEeCC
Confidence 58899999999999999984 999999999999999999999999999999988543 367999999988899999999
Q ss_pred CCCCCcccccCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 108 GTNLNELDAAFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 108 g~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|+++.+ ..|.+++|++ ..++|+.+... -.|++..|.....|+|+.
T Consensus 131 G~~~~y--~~W~~geP~~~~~~~~Cv~~~~~-----g~W~d~~C~~~~~fICe~ 177 (177)
T 1pwb_A 131 GESLVY--SNWAPGEPNDDGGSEDCVEIFTN-----GKWNDRACGEKRLVVCEF 177 (177)
T ss_dssp SCBCSC--CCBCTTCCCCGGGCCCEEEECTT-----SCEEEECTTSEEEEEEEC
T ss_pred cCCccc--CCcCCCcCCCCCCCCCcEEECCC-----CcEeCCCCCCCeeEEEeC
Confidence 999854 5688888876 46899988633 268999999999999984
No 281
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.79 E-value=2.7e-18 Score=171.39 Aligned_cols=170 Identities=21% Similarity=0.342 Sum_probs=135.7
Q ss_pred CccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCce
Q psy12060 587 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 666 (978)
Q Consensus 587 p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 666 (978)
+.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+.... .+.|.|.+++.+|+|.|+|.|.|..|.
T Consensus 19 ~~i~~~p--~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~~~n~~~~ 90 (218)
T 3k0w_A 19 SKITVNP--ESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN------TSELIFNAVHVKDAGFYVCRVNNNFTF 90 (218)
T ss_dssp CCEEECC--CCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC------SSEEEETTCCGGGCEEEEEEEECTTCC
T ss_pred CEEEECC--CCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC------CCEEEEccCChhhCeEeEEEEEcCCCC
Confidence 3444433 44558899999999999999999999999999886542 467999999999999999999998876
Q ss_pred e-eeeEEEEEEeCC--------------ceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccccccc
Q psy12060 667 D-ESKGRLIVLHGP--------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 731 (978)
Q Consensus 667 ~-~~~~~l~v~~~p--------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~ 731 (978)
. ...+.|.|...| +.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+...
T Consensus 91 ~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~--~v~W~~~~~~~~~~------ 162 (218)
T 3k0w_A 91 EFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIP--HYQWFKNELPLTHE------ 162 (218)
T ss_dssp EECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCC--EEEEEETTEECTTC------
T ss_pred ceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCC--eEEEEECCEECCCC------
Confidence 5 445788887653 223334556778899999999999988766 46999999887542
Q ss_pred CCeeecCCceEEEeccCCCCCEEEEEEEEcCCCc-eeeeEEEEEcCCC
Q psy12060 732 TPNINIDGGLLEITNASFADAGEYECVVKSTVGK-ISTKTTVIVEGPP 778 (978)
Q Consensus 732 ~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~-~s~~~~l~v~~~P 778 (978)
....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|..++
T Consensus 163 ------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 163 ------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 204 (218)
T ss_dssp ------CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC--
T ss_pred ------CCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCc
Confidence 2358999999999999999999999997 6677888887644
No 282
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.79 E-value=1.6e-19 Score=179.64 Aligned_cols=169 Identities=21% Similarity=0.358 Sum_probs=130.7
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCccC------------CCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCC-
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGSPL------------PRNAYFENFNRILTIPNVKVEDQGEYICRASNDRS- 475 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l------------~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g- 475 (978)
..+.+|++++|.|.+.+.|.+.+.|+|++..+ ....+.......|.|.+++.+|+|.|+|.+.+..|
T Consensus 14 ~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 93 (209)
T 1nbq_A 14 VRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGN 93 (209)
T ss_dssp CCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEETTSS
T ss_pred eEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEecCCCC
Confidence 35679999999999999999999999988763 11223333448899999999999999999999865
Q ss_pred -ceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEe-ecCCCCeeEEeECCEECCCCCCCC--CCCCcEEE--ecCEE
Q psy12060 476 -ALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEA-FGVPDVTYSWFRNGELLNSETLPL--EDQDRYFI--QDNVL 549 (978)
Q Consensus 476 -~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~--~~~~~~~~--~~~~l 549 (978)
..+..+.|.|..+|.+.....+..+.+|+.++|.|.+ .+.|.+.+.|++++..+....... ....++.. ..+.|
T Consensus 94 ~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 173 (209)
T 1nbq_A 94 SYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGEL 173 (209)
T ss_dssp CEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCE
T ss_pred ccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceE
Confidence 3456788889988887666666678999999999997 788999999999998876432110 00111222 34589
Q ss_pred EEEeCCCCCCCeEEEEEEEcCCCceeeEE
Q psy12060 550 TIRYLNPERDPAMYQCRAKNQLKTRYSSA 578 (978)
Q Consensus 550 ~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~ 578 (978)
.|.++.. +|+|.|+|.|.|..|....+.
T Consensus 174 ~i~~~~~-~d~G~Y~C~a~n~~g~~~~s~ 201 (209)
T 1nbq_A 174 VFDPLSA-SDTGEYSCEARNGYGTPMTSN 201 (209)
T ss_dssp EESSCCG-GGCCCEEEEEECSSSCCEECC
T ss_pred EEEeccc-cCCeEEEEEEeCCcCcccccc
Confidence 9999986 999999999999999874433
No 283
>1h8u_A MBP, eosinophil granule major basic protein 1; lectin, eosinophil granule protein, EMBP; 1.8A {Homo sapiens} SCOP: d.169.1.1 PDB: 2brs_A*
Probab=99.79 E-value=4.9e-19 Score=155.99 Aligned_cols=113 Identities=19% Similarity=0.255 Sum_probs=96.5
Q ss_pred ee-EEEEccCCCCHHHHHHHhhh-cCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeec--CCCccEEEcCCCCCCcc
Q psy12060 39 SC-YRFVKSPLKTRNDAKLNCKS-LDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQ--QSPNLWVNEDGTNLNEL 114 (978)
Q Consensus 39 ~C-y~~~~~~~~~~~~A~~~C~~-~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~--~~~~~w~w~dg~~~~~~ 114 (978)
+| |+++... ++|.+|+..|+. +||+||+|++++|++||..++... ....+||||.+. ..++.|.|.||+++.+
T Consensus 1 ~C~Y~~~~~~-~tw~~A~~~C~~~~g~~La~i~s~~e~~~l~~~~~~~-~~~~~WIGl~~~~~~~~~~~~W~dg~~~~y- 77 (117)
T 1h8u_A 1 TCRYLLVRSL-QTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSAL-NQGQVWIGGRITGSGRCRRFQWVDGSRWNF- 77 (117)
T ss_dssp --CEEEEEEE-ECHHHHHHHHHHHHSSEECCCCSHHHHHHHHHHHTTC-SSSEEEEEEEEECSSSCCEEEETTCCCCCC-
T ss_pred CeEEEEeCCc-cCHHHHHHHhccCCCCeEEeecCHHHHHHHHHHHhcc-CCCCEEEcccccCCCCCCccEeCCCCcCCc-
Confidence 59 9999995 999999999999 999999999999999999988643 245789999886 4679999999999864
Q ss_pred cccCCCCCCCcccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 115 DAAFLPEPADNVQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 115 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
..|.+++|++..++|+.+....+ .|.+..|.....|+|+.
T Consensus 78 -~~W~~~~P~~~~~~C~~~~~~~g----~W~~~~C~~~~~fiCe~ 117 (117)
T 1h8u_A 78 -AYWAAHQPWSRGGHCVALCTRGG----YWRRAHCLRRLPFICSY 117 (117)
T ss_dssp -CCBCSSSCCTTSCSEEEEETTTT----CEEEECTTSCEEEEEEC
T ss_pred -cCcCCCCCCCCCCCCeEEECCCC----cCCCCCCCCCcceeEeC
Confidence 56888888887799999976533 68999999999999984
No 284
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.79 E-value=9.9e-20 Score=182.33 Aligned_cols=160 Identities=19% Similarity=0.200 Sum_probs=102.6
Q ss_pred CCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCC
Q psy12060 803 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 882 (978)
Q Consensus 803 ~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~ 882 (978)
+.+..|++|.|+++......+ ... .....+.+++.+ |.|++.|.|||+|.|..|.|++|... .+.+.+
T Consensus 17 ~~~~~Vt~Y~~~~~~~~~~~~-~~~---------~~~~~t~~~~~~-L~p~t~Y~frV~A~n~~G~g~~s~~~-~~~t~~ 84 (232)
T 4go6_B 17 GTNVMVTHYFLPPDDAVPSDD-DLG---------TVPDYNQLKKQE-LQPGTAYKFRVAGINACGRGPFSEIS-AFKTCL 84 (232)
T ss_dssp SSEEEECEEECCCC----------------------------CEEE-CCTTCEEEEEEEEEETTEEEEECCCE-EEECCC
T ss_pred CCCEEEEEEEEEeeCCCCCcE-EEE---------ECCCccEEEeCC-CCCCCEEEEEEEEEeCCCccccccce-eeeecC
Confidence 345578899998765333222 211 123456789999 99999999999999999999998876 555656
Q ss_pred CCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeee----------ccceeEEEE---
Q psy12060 883 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE----------YGNVGIAVV--- 949 (978)
Q Consensus 883 ~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~--- 949 (978)
..|+.+|..+.. ..+.++|.|+|++ |.+.||+|++|+|+|+..+...+....... ........+
T Consensus 85 ~~~~~~~~~~~~-~~~~~sv~l~W~~--P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (232)
T 4go6_B 85 PGFPGAPCAIKI-SKSPDGAHLTWEP--PSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSS 161 (232)
T ss_dssp TTSCCCCEEEEE-EEETTEEEEEEEC--CSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHH
T ss_pred CCCCCCCeeeEE-ecCCCEEEEEEeC--CCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEcc
Confidence 666667755544 4677899999998 567788999999999887643322111000 000111112
Q ss_pred ----EcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 950 ----RIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 950 ----~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
.+.+|.+++.|.|||+|+|.+|.||+|+
T Consensus 162 ~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~ 193 (232)
T 4go6_B 162 SLSNAHIDYTTKPAIIFRIAARNEKGYGPATQ 193 (232)
T ss_dssp HHTTBCBEESSSEEEEEEEEEECSSCBCCCEE
T ss_pred ccEEeeecCccCCceEEEEEEECCCcCCCCcc
Confidence 2457899999999999999999999985
No 285
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.79 E-value=2.1e-18 Score=172.19 Aligned_cols=173 Identities=19% Similarity=0.313 Sum_probs=134.5
Q ss_pred cceeecCCCeEEEEEeeccCC----CCeeEEee----------------CCEEecC-----CCcEEEee------cCcEE
Q psy12060 596 SETYAGEGGNVTIFCNPEAAP----KPKFVWKK----------------DGNIIGS-----GGRRKIFE------NGNLL 644 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p----~~~i~W~~----------------~g~~~~~-----~~~~~~~~------~~~l~ 644 (978)
..+.+.+|++++|.|.+.+.+ .+.+.|++ ++..+.. ..+..+.. +.+|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 445688999999999999877 46999988 4444432 34555533 45699
Q ss_pred EccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEe-eecCCcCeEEEEeeCC--EE
Q psy12060 645 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNG--VR 721 (978)
Q Consensus 645 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~~~W~~~g--~~ 721 (978)
|.+++.+|+|.|+|.|.|..|.....+.|.|..+|...... ....+..|+.+.|.|.+ .+.|.+ .+.|++++ ..
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~-~~~~~~~g~~v~l~C~~~~g~p~~--~v~W~~~~~~~~ 164 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCF-VDGSEEIGNDFKLKCEPKEGSLPL--QFEWQKLSDSQT 164 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEE-EESCCBTTCCEEEEEECSBCCSSC--EEEEEECSTTCC
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceee-eecceecCCcEEEEecCCCCCCCC--EEEEEECCCCCc
Confidence 99999999999999999999988888999998887754432 23346789999999999 777765 45899954 33
Q ss_pred ccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCC
Q psy12060 722 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778 (978)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P 778 (978)
+... ......++.|.|.++..+|+|.|+|.|.|..|..+.++.|.|..||
T Consensus 165 ~~~~-------~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 165 MPTP-------WLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp CCGG-------GGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred cCcc-------ceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 3221 2233346699999999999999999999999999999999988654
No 286
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=1.6e-19 Score=175.33 Aligned_cols=171 Identities=15% Similarity=0.149 Sum_probs=117.2
Q ss_pred eeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCcee
Q psy12060 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385 (978)
Q Consensus 306 ~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~ 385 (978)
.+.+|+.++|.|.+. + +++.+.|+|+|..+............++.|.|.+++.+|+|.|+|.+.|..+.. ..+..+.
T Consensus 14 ~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~-~~s~~~~ 90 (188)
T 1oll_A 14 MVPKEKQVTICCQGN-Y-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWS-EPSNLLD 90 (188)
T ss_dssp EEETTCCEEEEEECC-T-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEEC-CCCCCEE
T ss_pred cCCCCCCEEEEEecC-C-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCC-CCCCceE
Confidence 678899999999984 3 456899999987643211111111234579999999999999999998754322 2244577
Q ss_pred EEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeE
Q psy12060 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGE 465 (978)
Q Consensus 386 l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~ 465 (978)
|.|......+.+...+ ...+.+|++++|.|.+.+ +.+.+.|+|++..+............|.|.+++.+|+|.
T Consensus 91 l~V~~~~~~p~i~~~p------~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~ 163 (188)
T 1oll_A 91 LVVTEMYDTPTLSVHP------GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGT 163 (188)
T ss_dssp EEEESCSCCCEEEEES------CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEEEEECSSEEEEEEEECCGGGCEE
T ss_pred EEecccCCCCeEEECC------CCccccCCEEEEEEEcCC-CCCEEEEEECCccccccccCCCceeEEEECCCCcCCCcE
Confidence 8886432222222111 134679999999999876 456999999998775422223345789999999999999
Q ss_pred EEEEEEeCCC---ceEEEEEEEEE
Q psy12060 466 YICRASNDRS---ALESSVTISIQ 486 (978)
Q Consensus 466 Y~C~a~n~~g---~~~~~~~l~V~ 486 (978)
|+|.|.|... ..+..+.|.|.
T Consensus 164 Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 164 YRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EEEECEEETTEECCCCCCEEEEEE
T ss_pred EEEEEEcCCCcCCCCCCcEEEEec
Confidence 9999998642 23445666553
No 287
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.79 E-value=2.3e-18 Score=165.06 Aligned_cols=165 Identities=16% Similarity=0.210 Sum_probs=126.6
Q ss_pred eeceeeccCCcccccCCCceeEEEEeecCCCCe-eEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEE
Q psy12060 487 AEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVT-YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 565 (978)
Q Consensus 487 ~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C 565 (978)
.+|.+...+....+.+|++++|.|.+.+.|.+. +.|+|+|..+.. ....|.|.++.. +|+|.|+|
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-------------~~~~L~i~~~~~-~d~G~Y~C 71 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-------------QASSYFIDAATV-NDSGEYRC 71 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES-------------SCSEEEESSCCG-GGCEEEEE
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-------------CceEEEEeCCCc-ccCEEEEE
Confidence 356677777777899999999999999887665 899999988752 245799999986 89999999
Q ss_pred EEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCC-eeEEeeCCEEecCCCcEEEeecCcEE
Q psy12060 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENGNLL 644 (978)
Q Consensus 566 ~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~~l~ 644 (978)
.+.|..+ .....+.|.. ++.+... ....+.+|+.++|.|.+.+.+++ .+.|+++|..+.. ....+.|.
T Consensus 72 ~~~n~~~--s~~~~l~V~~-~~~~~~~---~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-----~~~~~~L~ 140 (175)
T 1fnl_A 72 QTNLSTL--SDPVQLEVHI-GWLLLQA---PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-----FHHNSDFH 140 (175)
T ss_dssp ECSSSCC--CCCEEEEEEC-SSEEEEC---SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-----EEECCCEE
T ss_pred EeeCCcc--cccEEEEEeC-CCceeeC---CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-----CCCCCEEE
Confidence 9998554 3445666652 3332222 22447899999999999987765 9999999988732 23467899
Q ss_pred EccccCCCCEEEEEEEEeCCce-eeeeEEEEEE
Q psy12060 645 ISPVSRDDSGIYSCTATNVHGM-DESKGRLIVL 676 (978)
Q Consensus 645 i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~ 676 (978)
|.+++.+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 141 i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 141 IPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 9999999999999999997664 3445666665
No 288
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.79 E-value=4.9e-19 Score=169.22 Aligned_cols=165 Identities=15% Similarity=0.165 Sum_probs=122.5
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecCC-CCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-NPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
.|.|...|....+. +|+.++|.|.+.+.| .+.+.|+|+|.++.. ..+.+.|.++ +.+
T Consensus 4 ~p~i~~~p~~~~v~-----~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~----------------~~~~~~~~~~-~~~ 61 (170)
T 3ry4_A 4 KAVLKLEPPWINVL-----QEDSVTLTCQGARSPESDSIQWFHNGNLIPT----------------HTQPSYRFKA-NNN 61 (170)
T ss_dssp BCEEEEESCCSEEE-----TTCEEEEEEESCCCSSSSCEEEEETTEECTT----------------CCSSEEEEEC-CGG
T ss_pred CCEEEeCCCCeEEE-----CCCcEEEEEEecCCCCcceEEEEECCeEccc----------------CccceEEEec-ccc
Confidence 57888888776544 456799999999887 579999999865421 1334667776 899
Q ss_pred CCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEE
Q psy12060 268 DRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFV 347 (978)
Q Consensus 268 d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~ 347 (978)
|+|.|+|.|.|..+ +..+.|.|...+... ......+.+|+.+.|.|.+..+.|.+.+.|+|+|..+.. .
T Consensus 62 d~G~Y~C~~~~~~~---s~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~-------~ 130 (170)
T 3ry4_A 62 DSGEYTCQTGQTSL---SDPVHLTVLFEWLVL-QTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF-------S 130 (170)
T ss_dssp GCEEEEEEETTSBC---CCCEEEEEECCSEEE-ECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE-------E
T ss_pred cCeEEEEEEeCCCc---eEeEEEEEECCceEe-cCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc-------c
Confidence 99999999997654 346777776654322 233456778999999999876778899999999876421 2
Q ss_pred eeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEE
Q psy12060 348 SYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (978)
Q Consensus 348 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V 388 (978)
..++.|.|.+++.+|+|.|+|.|.|..|. ..+..+.|.|
T Consensus 131 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~--~~s~~~~l~V 169 (170)
T 3ry4_A 131 HLDPTFSIPQANHSHSGDYHCTGNIGYTL--FSSKPVTITV 169 (170)
T ss_dssp SSCCEEEESSCCGGGCEEEEEEEEETTEE--EECCCEEEEE
T ss_pred CCCCeEEEEeccccCCEEEEEEEEeCcCc--cccccEEEEE
Confidence 23567999999999999999999998753 2344466665
No 289
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.79 E-value=5.2e-19 Score=180.82 Aligned_cols=264 Identities=13% Similarity=0.101 Sum_probs=106.4
Q ss_pred EeCCCceEecCCCccccCcEEEEEEeecCCCC-eEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCCCeE
Q psy12060 193 IKQPTDVVFDLSKRSILNDITLSCYAGGYPNP-SYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGS 271 (978)
Q Consensus 193 ~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~ 271 (978)
.+.|.+.++. +|+.++|+|.+.. +.| .+.|.-.-. + ..+ ...+. ....|.|.++ +. .|.
T Consensus 3 ~v~P~~~~V~-----~G~sv~l~Cs~~c-~~p~~~~~~t~l~---~---~~~-~~~g~----~~~~~~l~~v-~~--~~~ 62 (291)
T 1mq8_A 3 SVSPSKVILP-----RGGSVLVTCSTSC-DQPKLLGIETPLP---K---KEL-LLPGN----NRKVYELSNV-QE--DSQ 62 (291)
T ss_dssp EEECSEEEEC-----TTCEEEEEEEECC-SSCSEEEEECSSC---C---CCC-CCSCS----SEEEEEEESC-CS--CCC
T ss_pred EEeCCccEEc-----CCCeEEEEEeCCC-CCCccceEEecCC---C---ccc-ccCCC----ceEEEEEEec-cc--CCe
Confidence 3456666654 4566999999974 445 488854210 0 000 00000 1124677776 42 357
Q ss_pred EEEEEEeCceeEEeEEEEEEEeeeccccc-CCCCeeeecccCeEEEeCCCCCCCCc--eEEEecccccccccccceEEEe
Q psy12060 272 YHCKASNKFGSIISESVQLAFGFIGEFNL-KRAPEIGNQNWGKAMFCDPPTNYPGV--NYYWARDYFPNFVEEDKRVFVS 348 (978)
Q Consensus 272 Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~-~~~~~~~~~~~~~~l~C~~~~~~p~~--~i~W~~~~~~~~~~~~~~~~~~ 348 (978)
|+|++. ..|...+..++|.|..+|..+. ...+..+.+|+.++|+|.+.++.|.. +|+|+|++..+.... .....
T Consensus 63 y~C~~~-~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~--~~~~~ 139 (291)
T 1mq8_A 63 PMCYSN-CPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP--AVGEP 139 (291)
T ss_dssp CEEEEE-CSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEE--CCBTT
T ss_pred EEEEEE-cCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeeccc--CCCCC
Confidence 999996 4456677788898887775433 33345678899999999998877765 689999987643211 00000
Q ss_pred eCCcEEEeeeeeecceeeEEEEEeeccccc-----ccCCceeEEEccCCCc-cccccCCCCCCCCCCCCCCCCcEEEEEE
Q psy12060 349 YDGALYFSALEQIDAGNYSCNVQSKVSDTG-----RNGPFFPLKVFPHSNF-QQLKFPNNFPKTFPEAPKAGDKVRLECV 422 (978)
Q Consensus 349 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~-----~~~~~~~l~V~~~~~~-~~~~~~~~~~~~~~~~v~~G~~~~l~C~ 422 (978)
...+|.+...+.+|.+.|+|+|.|..+..+ ..+....|.|.++|.. ..+.. +..+.+|+.++|.|.
T Consensus 140 ~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~--------p~~l~eG~~v~l~C~ 211 (291)
T 1mq8_A 140 AEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS--------PRVLEVDTQGTVVCS 211 (291)
T ss_dssp EEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----------------------------------
T ss_pred ceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecC--------CcCccCCCeEEEEEE
Confidence 112455555555666799999999865322 2345577888877543 22211 124679999999999
Q ss_pred EeecCCC---eeEEEEcCccCCCCceeeecccEEEeCCC---CCCC--CeEEEEEEEeCCCceEEEEEEEEEeec
Q psy12060 423 AFGYPVP---SYNWTRRGSPLPRNAYFENFNRILTIPNV---KVED--QGEYICRASNDRSALESSVTISIQAEP 489 (978)
Q Consensus 423 ~~g~p~~---~v~W~~~~~~l~~~~~~~~~~~~L~i~~~---~~~d--~G~Y~C~a~n~~g~~~~~~~l~V~~~p 489 (978)
+.|+|++ .|+|+++|+.+...... .+..+.+... ..+| .+.|+|.|.+.....+....|.|+..|
T Consensus 212 ~~g~~P~~~~~v~w~~~g~~l~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~ 284 (291)
T 1mq8_A 212 LDGLFPVSEAQVHLALGDQRLNPTVTY--GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP 284 (291)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred cCCCCCCcccEEEEEECCEecCceeee--cCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCC
Confidence 9997554 69999999998754322 2233444333 2434 567889998765556667778887643
No 290
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.78 E-value=7e-19 Score=180.72 Aligned_cols=202 Identities=17% Similarity=0.233 Sum_probs=118.7
Q ss_pred CCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCC-----CCeeEEeeC--CEEe
Q psy12060 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP-----KPKFVWKKD--GNII 629 (978)
Q Consensus 557 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~--g~~~ 629 (978)
..|+|.|+|.|. |.......+.+.. ++.+...+ ..+.+.+|++++|.|.+.+.| .+.+.|+|+ |..+
T Consensus 13 ~~dsg~Y~C~a~---g~~~~~~~~~~~~-~~~~~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 13 PGTSVKLSCKAS---GYSFTNYWMNWLR-ELVMTQSP--LTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp -----------------------------CCCEEEEC--SEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCC
T ss_pred CCccEEEEEcCc---hhhhhhhhhheee-ceeEEeCC--ceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCc
Confidence 389999999998 4333333333332 34444322 456689999999999999988 489999974 3221
Q ss_pred ----------c--CCCcEEEeecC---cEEEccccCCCCEEEEEEEEeCCceeee-eEEEEEEe---CCceeeeCCCceE
Q psy12060 630 ----------G--SGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVLH---GPSYYEQLPPKIT 690 (978)
Q Consensus 630 ----------~--~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~---~p~~~~~~~~~~~ 690 (978)
. ...++.+...+ +|.|.+++.+|+|.|+|.|.|..+.... ...|.|.. +|.+....+ ...
T Consensus 87 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~-~~~ 165 (254)
T 2c1o_A 87 KRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPP-SSE 165 (254)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECC-CHH
T ss_pred eEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecC-Chh
Confidence 1 12455554333 6999999999999999999997654322 23566643 333332222 222
Q ss_pred EEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccccc-----ccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCc
Q psy12060 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE-----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 765 (978)
Q Consensus 691 ~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~-----~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~ 765 (978)
...|+.++|.|.+.+.+++.+.+.|+++|..+....... .....+. ....|.|.++..+|+|.|+|.|.|....
T Consensus 166 ~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 166 QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYS-MSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp HHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEE-EEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred hccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEE-EEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 335779999999998766667789999998875530000 0000111 1347999999999999999999998765
Q ss_pred e
Q psy12060 766 I 766 (978)
Q Consensus 766 ~ 766 (978)
.
T Consensus 245 ~ 245 (254)
T 2c1o_A 245 S 245 (254)
T ss_dssp S
T ss_pred C
Confidence 3
No 291
>1rdl_1 SUB-MBP-C, mannose-binding protein-C; C-type lectin, calcium-binding protein; HET: MMA; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1rdj_1* 1rdk_1* 1rdi_1* 1rdm_1* 1rdn_1* 1rdo_1 1bv4_A 1kza_1* 1kzb_1* 1kzc_1* 1kzd_1* 1kze_1*
Probab=99.78 E-value=1e-18 Score=152.50 Aligned_cols=109 Identities=16% Similarity=0.209 Sum_probs=95.5
Q ss_pred CeeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcCCCCCCccccc
Q psy12060 38 DSCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNLNELDAA 117 (978)
Q Consensus 38 ~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~dg~~~~~~~~~ 117 (978)
.+||+++... ++|.+|+..|+.+||+||+|++++|++||.+++ ...+||||.+...++.|.|.||+++.+ ..
T Consensus 1 ~~CY~~~~~~-~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~-----~~~~WIGl~~~~~~~~~~W~dg~~~~y--~~ 72 (113)
T 1rdl_1 1 KKYFMSSVRR-MPLNRAKALCSELQGTVATPRNAEENRAIQNVA-----KDVAFLGITDQRTENVFEDLTGNRVRY--TN 72 (113)
T ss_dssp -CEEEECSSC-BCHHHHHHHHHHTTCEECCCCSHHHHHHHHHHC-----SSCEEEEEECSSSTTCCEETTSCBCCC--CC
T ss_pred CeEEEEeCCc-cCHHHHHHHHHhcCCEEcccCCHHHHHHHHHHh-----cCCEEEEeECCCCCCcEEECCCCEeec--CC
Confidence 3799999995 999999999999999999999999999999887 367999999988899999999999854 56
Q ss_pred CCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 118 FLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 118 ~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|.+++|++ ..++|+.+.... .|.+..|.....|+|+.
T Consensus 73 W~~~~P~~~~~~~~Cv~~~~~g-----~w~~~~C~~~~~~ICe~ 111 (113)
T 1rdl_1 73 WNEGEPNNVGSGENCVVLLTNG-----KWNDVPCSDSFLVVCEF 111 (113)
T ss_dssp BCTTCCCCCTTCCCEEEECTTS-----CEEEECTTSCBEEEEEE
T ss_pred CCCCcCCCCCCCCCeeEECCCC-----cEeccCCCCCceEEEee
Confidence 88888876 478999886431 68999999999999997
No 292
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.78 E-value=1.4e-18 Score=178.15 Aligned_cols=179 Identities=17% Similarity=0.082 Sum_probs=120.9
Q ss_pred cccCcEEEEEEeec---CCCCeEEEEEccccccccccc--------------------ccCCCCCCceEee---cceEEE
Q psy12060 207 SILNDITLSCYAGG---YPNPSYEWFKEDYVQDRLVAN--------------------LIDPLSDKRFTLS---GGNLII 260 (978)
Q Consensus 207 ~~g~~~~l~C~~~g---~p~~~v~W~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~---~~~l~i 260 (978)
.+|++++|.|.+.| .|.+.|.|+|++......... ...+....|..+. +.+|.|
T Consensus 15 ~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I 94 (250)
T 2fbo_J 15 HAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLRL 94 (250)
T ss_dssp CTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSCCEEE
T ss_pred ecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcceEEE
Confidence 34677999999998 888999999998543100000 0001123344433 358999
Q ss_pred eCCCCCCCCeEEEEEEEeCceeE----EeEEEEEEEeeec--ccccCCCC--eeeecccCeEEEeCCCCCCCCceEEEec
Q psy12060 261 NDPRQVEDRGSYHCKASNKFGSI----ISESVQLAFGFIG--EFNLKRAP--EIGNQNWGKAMFCDPPTNYPGVNYYWAR 332 (978)
Q Consensus 261 ~~~~~~~d~G~Y~C~a~n~~g~~----~s~~~~l~v~~~~--~~~~~~~~--~~~~~~~~~~l~C~~~~~~p~~~i~W~~ 332 (978)
.++ +.+|+|.|+|.|.|..+.. .+..+.|.|..++ +......+ ..+.+|+.++|.|.+ .+.|.|.|+|+|
T Consensus 95 ~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~-~g~p~p~v~W~k 172 (250)
T 2fbo_J 95 THV-HPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPC-TDCANANVTWYT 172 (250)
T ss_dssp CSC-CGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCE-ESCTTCEEEEEE
T ss_pred eeC-ChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEe-cCCCCCeeEEEe
Confidence 998 8999999999999987642 2456777776542 22211222 344568999999998 577888999999
Q ss_pred cccccccccc----------------------ceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEE
Q psy12060 333 DYFPNFVEED----------------------KRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLK 387 (978)
Q Consensus 333 ~~~~~~~~~~----------------------~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~ 387 (978)
++.++..... .+......+.|.|.+++.+|+|.|+|.|.|..|..+.....+.|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 173 GPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp EEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred CCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEEe
Confidence 9876543221 222222446899999999999999999999877655554444443
No 293
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.78 E-value=1.6e-18 Score=168.10 Aligned_cols=161 Identities=15% Similarity=0.226 Sum_probs=124.2
Q ss_pred CeeeecccCeEEEeCCCCCCCCceEEEeccccccccc------------ccceEEEe----e--CCcEEEeeeeeeccee
Q psy12060 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE------------EDKRVFVS----Y--DGALYFSALEQIDAGN 365 (978)
Q Consensus 304 ~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~------------~~~~~~~~----~--~~~L~i~~~~~~d~G~ 365 (978)
...+.+|+.++|.|.+. +.|.+.|.|+|++...... ...+.... . +.+|.|.+++.+|+|.
T Consensus 4 ~v~~~~G~~v~L~C~~~-~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTAS-QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp EEEEETTSCEEECCBCS-SSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred cEEEeCCCCEEEEEEEc-CCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 34577899999999984 7788999999998642221 12233332 2 2359999999999999
Q ss_pred eEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCce
Q psy12060 366 YSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY 445 (978)
Q Consensus 366 Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~ 445 (978)
|+|.+.|..+ .+.|.|...+ .++ ...+.+|++++|.|.+.+.|.+.++|++++..+
T Consensus 83 Y~C~~~~~~~-------~~~l~V~~~~------~~~------~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~----- 138 (184)
T 2ny1_B 83 YICEVEDQKE-------EVQLLVFGLT------ANS------DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN----- 138 (184)
T ss_dssp EEEEETTEEE-------EEEEEEEEEE------ESS------CSEEETTCCEEEEEECCTTCCCEEEEECTTSCE-----
T ss_pred EEEEEEcCCC-------cEEEEEEEec------CCC------CceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc-----
Confidence 9999988753 2456665311 111 135679999999999999999999999998665
Q ss_pred eeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeece
Q psy12060 446 FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPN 490 (978)
Q Consensus 446 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 490 (978)
......|.|.+++.+|+|.|+|.|.|..+..+..+.|.|...|.
T Consensus 139 -~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 139 -IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp -EEESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred -ccCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 23467899999999999999999999999999999999987764
No 294
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=1.3e-18 Score=176.59 Aligned_cols=225 Identities=14% Similarity=0.139 Sum_probs=123.4
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
.+|.|...|... + .+|++|+|+|.+.+ +.+.|.|||+|..+...... . .......++.|.|.++ +.+
T Consensus 6 ~kP~i~~~P~~~-V-----~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~--~---~~~~~~~~~~L~I~~v-~~~ 72 (257)
T 1b6u_A 6 RKPSLLAHPGPL-V-----KSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLI--G---EHHDGVSKANFSIGPM-MQD 72 (257)
T ss_dssp CCCEECCBSCSE-E-----ESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEE--C---BCCTTCEEEEEEECSC-CTT
T ss_pred CCCEEEEcCCCE-e-----cCCCCEEEEEecCC-CCcEEEEEECCCCCCcceee--e---eccCCCceEEEEeecC-Ccc
Confidence 458888888633 3 34677999999984 56899999999754211000 0 0001124567999887 899
Q ss_pred CCeEEEEEEEeCc----eeEEeEEEEEEEeeec---ccccCCCCeeeecccCeEEEeCCCCCCCCceEEEeccccccccc
Q psy12060 268 DRGSYHCKASNKF----GSIISESVQLAFGFIG---EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE 340 (978)
Q Consensus 268 d~G~Y~C~a~n~~----g~~~s~~~~l~v~~~~---~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~ 340 (978)
|+|.|+|.|.|.. .+..|..+.|.|.... .+...+ ...+.+|+.++|.|.+.. . ++.|.|+|+|..+...
T Consensus 73 DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p-~~~V~~G~~vtL~C~~~~-~-~~~~~w~k~g~~~~~~ 149 (257)
T 1b6u_A 73 LAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQP-GPTVLAGESVTLSCSSRS-S-YDMYHLSREGEAHERR 149 (257)
T ss_dssp TCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSS-CTTCBTTCEEEEEEECSS-C-CSEEEEEETTSSCEEC
T ss_pred cCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccC-CCccCCCCEEEEEEeCCC-C-CcEEEEEECCcccCcc
Confidence 9999999998653 2344667778776432 222222 235678999999999843 3 4689999999775332
Q ss_pred ccceEEE--eeCCcEEEeeeeeecceeeEEEEEeeccc--ccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCc
Q psy12060 341 EDKRVFV--SYDGALYFSALEQIDAGNYSCNVQSKVSD--TGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDK 416 (978)
Q Consensus 341 ~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~--~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~ 416 (978)
....... ..++.|.|.+++ |+|.|+|.|.+.... ....+..+.|.|...|... .|.. .......|..
T Consensus 150 ~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~---~p~~----~~~~~~~g~~ 220 (257)
T 1b6u_A 150 FSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNS---WPSP----TEPSSETGNP 220 (257)
T ss_dssp CBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC------------------------
T ss_pred cccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCC---CCCC----cccCccCCCe
Confidence 1111000 124579999998 999999999976432 2334556888888775432 1111 0112357999
Q ss_pred EEEEEEEeecCCCeeEEEEcCc
Q psy12060 417 VRLECVAFGYPVPSYNWTRRGS 438 (978)
Q Consensus 417 ~~l~C~~~g~p~~~v~W~~~~~ 438 (978)
+.|.|.+ |.+.+.|.|...+.
T Consensus 221 ~~l~~~~-~~~~~~~~~~~~~~ 241 (257)
T 1b6u_A 221 RHLHAAA-EQKLISEEDLNLDL 241 (257)
T ss_dssp ----------------------
T ss_pred EEEEEEE-cchHHHHHHhhhhh
Confidence 9999854 77777899987553
No 295
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.78 E-value=3.3e-18 Score=172.03 Aligned_cols=176 Identities=14% Similarity=0.150 Sum_probs=113.0
Q ss_pred cccCcEEEEEEeecCCCC---eEEEEEcccccc-------cccccccCCCCCCceEe-------ecceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYPNP---SYEWFKEDYVQD-------RLVANLIDPLSDKRFTL-------SGGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p~~---~v~W~~~~~~~~-------~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.+.|.+ .|+|+|++.... +.......+....|... .+.+|.|.++ +.+|+
T Consensus 17 ~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v-~~~D~ 95 (226)
T 4f80_A 17 MVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV-TASDS 95 (226)
T ss_dssp ETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC-CGGGC
T ss_pred EcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC-chHHC
Confidence 357789999999877665 799999874321 00001111112223222 1347999998 89999
Q ss_pred eEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEee
Q psy12060 270 GSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSY 349 (978)
Q Consensus 270 G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~ 349 (978)
|.|+|.|.|..|.. .+.+.+...+.+...........|..+.|.|.+.++.|.|.|+|+|++..+............
T Consensus 96 G~Y~C~a~n~~~~~---~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~ 172 (226)
T 4f80_A 96 GKYLCYFQDGDFYE---KALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADG 172 (226)
T ss_dssp EEEEEEEEETTEEE---EEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECT
T ss_pred eeEEEEEECCCcEE---EEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECC
Confidence 99999999998864 234444444444444445566788889999998666799999999977654444444444455
Q ss_pred CCc---EEEeeeeeecceeeEEEEEeecccccccCCceeEEEc
Q psy12060 350 DGA---LYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (978)
Q Consensus 350 ~~~---L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~ 389 (978)
++. +.+..++.+|+|.|+|.|.|..+.... .+.|.|.
T Consensus 173 ~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~---~~~v~v~ 212 (226)
T 4f80_A 173 VGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEK---TASISIA 212 (226)
T ss_dssp TSCEEEEEEEEECC----CEEEEEEETTTTEEE---EEEECCC
T ss_pred CCcEEEEEEEEechhcCcEEEEEEEeCCCCeEE---EEEEEEC
Confidence 554 345577889999999999998865432 2455554
No 296
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.78 E-value=1.4e-18 Score=171.49 Aligned_cols=168 Identities=19% Similarity=0.247 Sum_probs=120.4
Q ss_pred CCCCCCcEEEEEEEeecCC-----CeeEEEE-cCccCCCCceee--e-----cccEEEeCCCCCCCCeEEEEEEEeCCCc
Q psy12060 410 APKAGDKVRLECVAFGYPV-----PSYNWTR-RGSPLPRNAYFE--N-----FNRILTIPNVKVEDQGEYICRASNDRSA 476 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~-----~~v~W~~-~~~~l~~~~~~~--~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 476 (978)
.+.+|++++|.|.+.+.|. +.|.|+| ++.......+.. . ...+|.|.+++.+|+|.|+|.|.|..+.
T Consensus 13 ~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 92 (202)
T 3bp6_B 13 TVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAW 92 (202)
T ss_dssp EEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred EEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCc
Confidence 4579999999999998876 7899999 444333222221 1 3468999999999999999999999888
Q ss_pred eEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCC
Q psy12060 477 LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 556 (978)
Q Consensus 477 ~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 556 (978)
.+..+.|.|..++..... ....+.+|+.+.|.|.+.|.|.+.+.|++++..+...... .....+ ..+.+..+..
T Consensus 93 ~~~~~~l~V~~~~~~p~~-~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~-~~~~~~----~~~~i~~v~~ 166 (202)
T 3bp6_B 93 DYKYLTVKVKASYMRIDT-RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIR-TPEGLY----QVTSVLRLKP 166 (202)
T ss_dssp EEEEEEEEEEBCCCCEEE-EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEE-CTTSCE----EEEEEEEECC
T ss_pred ceEEEEEEecCCCCcccE-EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceee-CCCCCE----EEEEEEEEEc
Confidence 888899999876421110 1124568999999999999999999999987654311000 001111 2455667775
Q ss_pred CCCCeEEEEEEEcCCCceeeEEEEEEEE
Q psy12060 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLT 584 (978)
Q Consensus 557 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 584 (978)
+|+|.|+|.|.|..|.....+.+.|..
T Consensus 167 -~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 167 -QPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp -CTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred -CCCCEEEEEEEcCCcccccEEEEEecC
Confidence 899999999999999988887776643
No 297
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.78 E-value=3e-19 Score=172.81 Aligned_cols=142 Identities=18% Similarity=0.384 Sum_probs=109.4
Q ss_pred CCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCC-CCCCCCeEEEEEEEeCCCceEEEEEEEEEee--
Q psy12060 412 KAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPN-VKVEDQGEYICRASNDRSALESSVTISIQAE-- 488 (978)
Q Consensus 412 ~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-- 488 (978)
.+|++++|.|.+.+ |. .|+|+|+|..+... .+++|.|.+ ++.+|+|.|+|.|.|..|..+..+.+.|...
T Consensus 12 ~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~-----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~ 84 (186)
T 1jbj_A 12 ISGTSVELTCPLDS-DE-NLKWEKNGQELPQK-----HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADD 84 (186)
T ss_dssp EETTEEEEECSSCC-CT-TCEEEETTEEECSC-----CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCC
T ss_pred eCCcEEEEEEeCCC-CC-ceEEEECCEECCCC-----CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccc
Confidence 57999999999987 44 49999999998754 246899999 9999999999999999888655555554432
Q ss_pred ceeec----------------cCC----c---ccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEe
Q psy12060 489 PNFTI----------------PLT----D---KHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ 545 (978)
Q Consensus 489 p~~~~----------------~~~----~---~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~ 545 (978)
|.... ... . ..+.+|+++.|.|.+ |.+.|+|+|+|..+.... . .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~-------~---~ 151 (186)
T 1jbj_A 85 AKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLN-------A---T 151 (186)
T ss_dssp CCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSS-------C---C
T ss_pred cccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccC-------C---C
Confidence 21000 000 0 124499999999998 789999999999986321 1 4
Q ss_pred cCEEEEEeCCCCCCCeEEEEEEEcCCCce
Q psy12060 546 DNVLTIRYLNPERDPAMYQCRAKNQLKTR 574 (978)
Q Consensus 546 ~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~ 574 (978)
.+.|.|.++.. +|+|.|+|.|.|..|..
T Consensus 152 ~~~L~i~~v~~-~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 152 KNTWNLGNNAK-DPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSCCEEEETTS-CCEEEEEEEESSCEEEE
T ss_pred cceEEECCCCc-CcCEEEEEEEEcCcCCc
Confidence 56899999997 99999999999987754
No 298
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=3.1e-18 Score=172.50 Aligned_cols=189 Identities=12% Similarity=0.088 Sum_probs=126.5
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
++|.|..+|.. .+ .+|++|+|+|.+.+ +.+.+.|||+|..+.... ........++.|.|.++ +.+
T Consensus 6 ~kP~i~~~P~~-~v-----~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~-------~~~~~~~~~~~L~I~~v-~~~ 70 (242)
T 1p6f_A 6 PKPFIWAEPHF-MV-----PKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDR-------PKPPERINKVKFYIPDM-NSR 70 (242)
T ss_dssp CCCEEEEESCS-EE-----ETTCCEEEEEECCT-TCCEEEEEETTEEEEEEC-------CSSCTTCCEEEEEECSC-CGG
T ss_pred CCCEEEeeCCC-cc-----CCCCcEEEEEeeCC-CCcEEEEEECCCcccccc-------ccccCCcceeEEEecCC-Ccc
Confidence 46889998887 33 34667999999985 457999999986542110 00011124567999997 899
Q ss_pred CCeEEEEEEEeCcee-EEeEEEEEEEeee---cccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccc
Q psy12060 268 DRGSYHCKASNKFGS-IISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDK 343 (978)
Q Consensus 268 d~G~Y~C~a~n~~g~-~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 343 (978)
|+|.|+|.+.|..+. ..|..+.|.|... |.+... +...+.+|+.++|.|.+.. +.+.|.|+|+|..+.. .
T Consensus 71 DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~-p~~~v~~G~~vtL~C~~~~--~~~~~~w~k~g~~~~~---~ 144 (242)
T 1p6f_A 71 MAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVH-PGPEVISGEKVTFYCRLDT--ATSMFLLLKEGRSSHV---Q 144 (242)
T ss_dssp GCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEE-SCSEEETTCEEEEEEECTT--SCSEEEEEECSSSCEE---E
T ss_pred cCeEEEEEEecCCccccCCcceEEEeecccCCCceEcc-CCCccCCCCcEEEEEecCC--CCCEEEEEECCCccCc---c
Confidence 999999999887543 3466777777532 222222 2346788999999999853 3458999999976532 1
Q ss_pred eEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCCCcccc
Q psy12060 344 RVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL 397 (978)
Q Consensus 344 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~ 397 (978)
......++.|.|.+++.+|+|.|+|.+.|........+..+.|.|...+..+.+
T Consensus 145 ~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P~l 198 (242)
T 1p6f_A 145 RGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTSL 198 (242)
T ss_dssp EEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC-------
T ss_pred ccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCCCcc
Confidence 111223457999999999999999999987522234556688999876544433
No 299
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.77 E-value=5.9e-18 Score=184.12 Aligned_cols=261 Identities=14% Similarity=0.156 Sum_probs=178.8
Q ss_pred CCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCC--CCEEEEEEEEcC
Q psy12060 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA--DAGEYECVVKST 762 (978)
Q Consensus 685 ~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~--d~g~Y~c~a~n~ 762 (978)
.|....+..|..+++.|..... + .....++.... ...+......++|.++... -...|.|...
T Consensus 204 fP~~~vv~~GS~vt~~Ci~~~~----~-~~~~l~~~~~~--------~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~-- 268 (483)
T 3e0g_A 204 FPQDKVILVGSDITFCCVSQEK----V-LSALIGHTNCP--------LIHLDGENVAIKIRNISVSASSGTNVVFTTE-- 268 (483)
T ss_dssp ESCSEEEETTCCEEEEECCSSC----E-EEEESSSCCBC--------CEECSSSCEEEEECSCCCCCSSCEEEEEEES--
T ss_pred eccCCEEeCCCCEEEEEEeCcc----c-cceecCcccce--------eEEecCCEEEEEEeCCCCccCccceEEEecC--
Confidence 3556678899999999988732 1 12222221111 0112223456777777552 3356999862
Q ss_pred CCceeeeEEEEEcCCCCCCCceEEEEeeCCeeEEEeecCCCCC---CCceeEEEEEeeccccCceEecccccceeeeecC
Q psy12060 763 VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG---RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839 (978)
Q Consensus 763 ~G~~s~~~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~---~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~ 839 (978)
.....+.+.+..||++|.++.......++++++|++|.+.+ .+++.|.|.|+..+. ...+..... ...
T Consensus 269 --~~~~g~~l~vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~--~~~C~~~~~-----~~~ 339 (483)
T 3e0g_A 269 --DNIFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGK--YVRLKRAEA-----PTN 339 (483)
T ss_dssp --SCEEEEEEEEECCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCC--EEEECCCSS-----CSC
T ss_pred --CcccceEEECcCCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCC--CccccCCcc-----cCC
Confidence 23455678888999999999997777789999999988664 348999999986432 122211000 012
Q ss_pred CceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcc
Q psy12060 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 919 (978)
Q Consensus 840 ~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~ 919 (978)
......+.+ |.+.+.|.|+|.|.|..|.+.. .. .+...+.+++.||.++++...+.+++.|+|++| ...++.+.
T Consensus 340 ~~~~C~~~~-l~~~t~Y~f~V~A~N~lG~~~S-~~--~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P--~~~~~~~L 413 (483)
T 3e0g_A 340 ESYQLLFQM-LPNQEIYNFTLNAHNPLGRSQS-TI--LVNITEKVYPHTPTSFKVKDINSTAVKLSWHLP--GNFAKINF 413 (483)
T ss_dssp SCEEEEEEC-CTTCCCEEEEEEEECSSCEEEE-EE--EECGGGGBCCCCCEEEEECCSSSSSCCEEEECC--SCCTTSBC
T ss_pred CEEEEEEcc-CCCCcEEEEEEEEEeCCCCccc-ce--EEEeccccCCCCCeeeEEEEecCCeEEEEECCC--CCCCCceE
Confidence 345677888 9999999999999999998873 32 444445566789999999888889999999994 35677889
Q ss_pred eEEEEEEecCCc-cceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCC---CCCCC
Q psy12060 920 YYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESE 977 (978)
Q Consensus 920 ~Y~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~---gp~S~ 977 (978)
.|.|+|+..+.. +|....+... ......+.|.+|.|++.|.|+|+|. ..|. |++|+
T Consensus 414 ~YeVrYr~~~~~~~~~~vsv~~~-~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~ 473 (483)
T 3e0g_A 414 LCEIEIKKSNSVQEQRNVTIQGV-ENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSN 473 (483)
T ss_dssp CCEEEEECSSSCCCEEECCCBCC-SSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCC
T ss_pred EEEEEEEECCCCCceEEEEEecc-CCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCC
Confidence 999999988754 3543222111 1122246699999999999999999 7888 45554
No 300
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=8.1e-19 Score=178.05 Aligned_cols=210 Identities=14% Similarity=0.087 Sum_probs=120.9
Q ss_pred eeeecccCeEEEeCCCCCCCCceEEEeccccccccccc-ceE-EEeeCCcEEEeeeeeecceeeEEEEEeeccc--cccc
Q psy12060 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED-KRV-FVSYDGALYFSALEQIDAGNYSCNVQSKVSD--TGRN 380 (978)
Q Consensus 305 ~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~-~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~--~~~~ 380 (978)
..+.+|+.++|.|.+.. +.+.|.|+|+|..+..... .+. ....++.|.|.+++.+|+|.|+|.+.+.... ....
T Consensus 16 ~~V~~G~~VtL~C~~~~--~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~ 93 (257)
T 1b6u_A 16 PLVKSEETVILQCWSDV--RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAP 93 (257)
T ss_dssp SEEESSCCEEEEEEESS--CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCC
T ss_pred CEecCCCCEEEEEecCC--CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCcccccc
Confidence 56788999999999842 4678999999876421100 000 0112457999999999999999999875321 1233
Q ss_pred CCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCce---e--eecccEEEe
Q psy12060 381 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY---F--ENFNRILTI 455 (978)
Q Consensus 381 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~---~--~~~~~~L~i 455 (978)
+..+.|.|......+.+...+. ..+.+|++++|.|.+.+.+ +.|.|+|+|..+..... . ...+..|.|
T Consensus 94 S~~~~L~V~~~~~~P~l~~~p~------~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I 166 (257)
T 1b6u_A 94 SDPLDIVITGLYEKPSLSAQPG------PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPL 166 (257)
T ss_dssp CCCEEEEEECSSCCCEEECSSC------TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEE
T ss_pred CCCEEEecccCCCCcceEccCC------CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEEe
Confidence 4557888876433233322221 2578999999999988754 69999999988753221 1 113578999
Q ss_pred CCCCCCCCeEEEEEEEeCCC-----ceEEEEEEEEEeeceeeccC-CcccccCCCceeEEEEeecCCCCeeEEeECC
Q psy12060 456 PNVKVEDQGEYICRASNDRS-----ALESSVTISIQAEPNFTIPL-TDKHMDNQADLTWTCEAFGVPDVTYSWFRNG 526 (978)
Q Consensus 456 ~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g 526 (978)
.+++ |+|.|+|.|.+... ..+..+.|.|..+|.+..+. .......|..+.|.|.+ |.+.+.|.|..-+
T Consensus 167 ~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 167 GPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLNLD 240 (257)
T ss_dssp EECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC--------------------------------------
T ss_pred cccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhhhh
Confidence 9998 99999999997532 23456889999888765322 22235678899999875 6678889997643
No 301
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.77 E-value=1.5e-18 Score=165.86 Aligned_cols=156 Identities=18% Similarity=0.260 Sum_probs=119.7
Q ss_pred ceeecCCCeEEEEEeecc--CCCCeeEEeeCCEEec----------CCCcEEEeecCcEEEccccCCCCEEEEEEEEeCC
Q psy12060 597 ETYAGEGGNVTIFCNPEA--APKPKFVWKKDGNIIG----------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 664 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~--~p~~~i~W~~~g~~~~----------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 664 (978)
.+.+.+|++++|.|...+ .+.+.|.|+|++..+. ...++.+..+++|.|.+++.+|+|.|+|.|.|..
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence 345789999999995433 4566899999996542 3567777778889999999999999999999999
Q ss_pred cee--eeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceE
Q psy12060 665 GMD--ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 742 (978)
Q Consensus 665 g~~--~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l 742 (978)
|.. ...+.|.|..++. .+.+ ...+..+.|.|.+.+.|.| .+.|+++|..+... ..+
T Consensus 85 g~~~~~~~~~l~V~~~~~-----~p~i-~~~~~~v~L~C~~~g~p~p--~i~W~~~g~~l~~~--------------~~~ 142 (176)
T 1hng_A 85 GTRILNKALDLRILEMVS-----KPMI-YWECSNATLTCEVLEGTDV--ELKLYQGKEHLRSL--------------RQK 142 (176)
T ss_dssp CCEEEEEEEEEEEECCCC-----CCEE-EEETTTTEEEEECSSCSSC--EEEEEETTEEEEEE--------------SSS
T ss_pred CCEEEEEEEEEEEeCCCC-----CCEE-EecCCcEEEEEEecCCCCc--EEEEEECCEECCCC--------------CcE
Confidence 886 5567777766432 1122 2334569999999998875 56999999887542 124
Q ss_pred EEeccCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy12060 743 EITNASFADAGEYECVVKSTVGKISTKTTVIV 774 (978)
Q Consensus 743 ~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v 774 (978)
.|..+..+|+|.|+|.|.|.+|..++.+.|.+
T Consensus 143 ~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 143 TMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 55677899999999999999999888766544
No 302
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.77 E-value=2.1e-18 Score=176.95 Aligned_cols=180 Identities=17% Similarity=0.216 Sum_probs=125.9
Q ss_pred ccCCcccccCCCceeEEEEeec---CCCCeeEEeECCEECCCCC-----------------------CCCCCCCcEEEec
Q psy12060 493 IPLTDKHMDNQADLTWTCEAFG---VPDVTYSWFRNGELLNSET-----------------------LPLEDQDRYFIQD 546 (978)
Q Consensus 493 ~~~~~~~~~~g~~~~l~C~~~~---~p~~~i~W~~~g~~~~~~~-----------------------~~~~~~~~~~~~~ 546 (978)
.++.+..+.+|++++|.|.+.+ .|.+.|.|+|++....... .......+..+..
T Consensus 7 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 86 (250)
T 2fbo_J 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 86 (250)
T ss_dssp CSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC
T ss_pred cCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc
Confidence 3455677899999999999987 7889999999875420000 0011223443332
Q ss_pred ---CEEEEEeCCCCCCCeEEEEEEEcCCCce-----eeEEEEEEEEc--CCccccCCCCcceeecCCCeEEEEEeeccCC
Q psy12060 547 ---NVLTIRYLNPERDPAMYQCRAKNQLKTR-----YSSAQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAP 616 (978)
Q Consensus 547 ---~~l~i~~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~--~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 616 (978)
..|.|.++.. +|+|.|+|.+.|..+.. .....|.|... +|.+.. .......+.+|+.+.|.|.+.+.|
T Consensus 87 ~~~~~L~I~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~-~~~~~~~v~~g~~v~L~C~~~g~p 164 (250)
T 2fbo_J 87 LAAPTLRLTHVHP-QDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHV-STAEVVQVDEGNDITMTCPCTDCA 164 (250)
T ss_dssp TTSCCEEECSCCG-GGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEE-CCCSEEECCTTCCEEECCCEESCT
T ss_pred CCcceEEEeeCCh-hhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEE-ecCceEEecCCCcEEEEEEecCCC
Confidence 4899999997 99999999999987653 34566666542 222322 223445577899999999999999
Q ss_pred CCeeEEeeCCEEecCCC------------------------cEEEeecCcEEEccccCCCCEEEEEEEEeCCc---eeee
Q psy12060 617 KPKFVWKKDGNIIGSGG------------------------RRKIFENGNLLISPVSRDDSGIYSCTATNVHG---MDES 669 (978)
Q Consensus 617 ~~~i~W~~~g~~~~~~~------------------------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g---~~~~ 669 (978)
.|.++|++++..+.... +......+.|.|.++..+|+|.|+|.|.|..| ....
T Consensus 165 ~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~ 244 (250)
T 2fbo_J 165 NANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRS 244 (250)
T ss_dssp TCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEE
T ss_pred CCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccce
Confidence 99999999988775422 11112336799999999999999999999554 4444
Q ss_pred eEEEE
Q psy12060 670 KGRLI 674 (978)
Q Consensus 670 ~~~l~ 674 (978)
++.|.
T Consensus 245 ~~~l~ 249 (250)
T 2fbo_J 245 STILK 249 (250)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 44443
No 303
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=9.7e-18 Score=162.56 Aligned_cols=162 Identities=22% Similarity=0.391 Sum_probs=122.5
Q ss_pred ccccCCCceeEEEEeecCCCC--eeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCcee
Q psy12060 498 KHMDNQADLTWTCEAFGVPDV--TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 575 (978)
Q Consensus 498 ~~~~~g~~~~l~C~~~~~p~~--~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 575 (978)
..+.+|++++|.|.+.+.|.+ .+.|+|+|..+...... . ....|.|. . .+|+|.|+|.+.|. ..
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~---~-----~~~~l~i~--~-~~d~G~Y~C~~~n~---~~ 73 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP---G-----QKTEFKVD--S-DDQWGEYSCVFLPE---PM 73 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC---C-----SEEEEEEC--G-GGCCEEEEEEEEST---TS
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc---C-----CcEEEEEe--c-hhhCeEEEEEEECC---cC
Confidence 356789999999999987766 99999999988643210 0 12234444 3 38999999999983 23
Q ss_pred eEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCC-CCeeEEee---CCE-EecCC--CcEEEeecC---cEEE
Q psy12060 576 SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP-KPKFVWKK---DGN-IIGSG--GRRKIFENG---NLLI 645 (978)
Q Consensus 576 ~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~i~W~~---~g~-~~~~~--~~~~~~~~~---~l~i 645 (978)
....|.|. .+|.+...+ ....+.+|+.++|.|.+.+.| .+.+.|++ ++. .+... .++.+..++ .|.|
T Consensus 74 ~~~~l~V~-~~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 150 (184)
T 3b5h_A 74 GTANIQLH-GPPRVKAVK--SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHI 150 (184)
T ss_dssp CEEEEEEC-CSCCCEESC--SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEE
T ss_pred cEEEEEEe-cCCceeecC--CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEE
Confidence 55667775 467666554 344578999999999999999 78999999 444 44332 456655444 6999
Q ss_pred cccc-CCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 646 SPVS-RDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 646 ~~~~-~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
.++. .+|+|.|+|.|.|..|.....+.|.|.
T Consensus 151 ~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 151 ENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp CSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 9999 899999999999999999888888774
No 304
>1byf_A TC14, protein (polyandrocarpa lectin); C-type lectin, galactose-specific, sugar binding protein; 2.00A {Polyandrocarpa misakiensis} SCOP: d.169.1.1 PDB: 1tlg_A*
Probab=99.76 E-value=1.7e-18 Score=154.45 Aligned_cols=115 Identities=17% Similarity=0.142 Sum_probs=96.4
Q ss_pred cCeeEEEEccCCCCHHHHHHHhhhcCCeeee--eCChhhHHHHHHHhhccCCCCceEEEEeecCCCcc--EEEcCCCCCC
Q psy12060 37 RDSCYRFVKSPLKTRNDAKLNCKSLDSDLAN--VNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNL--WVNEDGTNLN 112 (978)
Q Consensus 37 ~~~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~--i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~--w~w~dg~~~~ 112 (978)
+++||+|+... ++|.+|+.+|+.+||+||+ |++++|++||.++ . ......+|||| +...++. |.|.||+++.
T Consensus 1 g~~Cy~~~~~~-~~w~~A~~~C~~~g~~La~~~i~s~~e~~~l~~~-~-~~~~~~~WIGl-~~~~~~~~~w~W~dg~~~~ 76 (125)
T 1byf_A 1 MDYEILFSDET-MNYADAGTYCQSRGMALVSSAMRDSTMVKAILAF-T-EVKGHDYWVGA-DNLQDGAYNFLWNDGVSLP 76 (125)
T ss_dssp -CEEEEEEEEE-ECHHHHHHHHHTTTCEESCGGGGSHHHHHHHHHH-H-HHHTCCEEEEE-ESTTTCTTCCEETTSCBCC
T ss_pred CCeEEEEeCCC-CCHHHHHHHHHHcCCEeeecCCCCHHHHHHHHHh-c-CCCCCCEEEec-ccCCCCceeEEECCCCCCc
Confidence 58999999995 9999999999999999999 9999999999988 2 12346799999 8888999 9999999984
Q ss_pred cccc-cCCCCCCCc--ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 113 ELDA-AFLPEPADN--VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 113 ~~~~-~~~~~~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
.+ . .|.+++|++ +.++|+.+. .. ...|.+..|.....|+|+..
T Consensus 77 ~~-~~~W~~~~P~~~~~~~~Cv~~~-~~---~~~W~d~~C~~~~~fICe~~ 122 (125)
T 1byf_A 77 TD-SDLWSPNEPSNPQSWQLCVQIW-SK---YNLLDDVGCGGARRVICEKE 122 (125)
T ss_dssp TT-CTTBCTTCSCSCTTSCCEEEEE-TT---TTEEEEECSCSCEEEEEEEE
T ss_pred cc-ccCcCCCcCCCCCCCCCceEEE-CC---CCcEECcCCCCceeEEEeee
Confidence 33 4 688888876 367999997 32 13789999999999999973
No 305
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.76 E-value=2.3e-18 Score=176.05 Aligned_cols=263 Identities=12% Similarity=0.075 Sum_probs=103.6
Q ss_pred cCCcccccCCCceeEEEEeecCCCCeeEEeEC--CEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCC
Q psy12060 494 PLTDKHMDNQADLTWTCEAFGVPDVTYSWFRN--GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQL 571 (978)
Q Consensus 494 ~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~ 571 (978)
.+....+.+|+++.|+|.+....+..+.|.-. ...+.. ... ....+.+.++.. | |.|.|.+....
T Consensus 5 ~P~~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~------~g~----~~~~~~l~~v~~--~-~~y~C~~~~~~ 71 (291)
T 1mq8_A 5 SPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLL------PGN----NRKVYELSNVQE--D-SQPMCYSNCPD 71 (291)
T ss_dssp ECSEEEECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCC------SCS----SEEEEEEESCCS--C-CCCEEEEECSS
T ss_pred eCCccEEcCCCeEEEEEeCCCCCCccceEEecCCCccccc------CCC----ceEEEEEEeccc--C-CeEEEEEEcCC
Confidence 34556789999999999987433334888531 111100 000 112467777752 3 56999997544
Q ss_pred CceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCC---eeEEeeCCEEecCCCcEEEeecCcEEEccc
Q psy12060 572 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIFENGNLLISPV 648 (978)
Q Consensus 572 g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~---~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~ 648 (978)
......+.+.|...|-.+.+.+.+ ..+.+|+.++|.|.+.+.+++ +|+|+|+++.+............+|.+...
T Consensus 72 ~~~~~~v~l~V~~~P~~v~I~~~~--~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~ 149 (291)
T 1mq8_A 72 GQSTAKTFLTVYWTPERVELAPLP--SWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVR 149 (291)
T ss_dssp CEEEEECEEEECBCCSCCCBCCCC--SBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCS
T ss_pred ccEEEEEEEEEecCCCCCEEecCC--ccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeee
Confidence 344455566666433333333322 237789999999999886443 589999998775332100011234777777
Q ss_pred cCCCCEEEEEEEEeCCce--------eeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCc-CeEEEEeeCC
Q psy12060 649 SRDDSGIYSCTATNVHGM--------DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL-DVAYIWTHNG 719 (978)
Q Consensus 649 ~~~d~G~Y~C~a~n~~g~--------~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~~W~~~g 719 (978)
..+|.+.|+|+|.|..+. .+....|.|.++|...........+..|+.++|.|.+.+.+++ ++.++|.++|
T Consensus 150 ~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g 229 (291)
T 1mq8_A 150 RDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGD 229 (291)
T ss_dssp SSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC---------------------------------------------
T ss_pred eccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECC
Confidence 777888999999997663 2344678887776432221112257789999999999997654 6788999999
Q ss_pred EEccccccccccCCeeecCCceEEEecc---CCCC--CEEEEEEEEcCCCceeeeEEEEEcCCCCC
Q psy12060 720 VRIGNMDLNELETPNINIDGGLLEITNA---SFAD--AGEYECVVKSTVGKISTKTTVIVEGPPGL 780 (978)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d--~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~ 780 (978)
..+... ...+++.+.+... ..++ .+.|+|.|.|.....++...|+|...|.|
T Consensus 230 ~~l~~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~~ 286 (291)
T 1mq8_A 230 QRLNPT---------VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAP 286 (291)
T ss_dssp ------------------------------------------------------------------
T ss_pred EecCce---------eeecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCCc
Confidence 887541 1123444554443 2334 56677888775555666777888776554
No 306
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.76 E-value=2.4e-18 Score=180.27 Aligned_cols=182 Identities=14% Similarity=0.109 Sum_probs=118.3
Q ss_pred CCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCcee
Q psy12060 777 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 856 (978)
Q Consensus 777 ~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y 856 (978)
...+|.++++... ..++.|+|+||.++++++. |.|+|+..+...|.....-... ....-.++..+ |.+++.|
T Consensus 3 ~l~~P~nv~~~~~-n~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~-----~~~~c~lt~~~-l~~~~~Y 74 (306)
T 3s98_A 3 PLKSPQKVEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNI-----TSTKCNFSSLK-LNVYEEI 74 (306)
T ss_dssp -----CCCEEEEE-TTEEEEECC--------CE-EEEEEEESSCSSCEECTTCSSB-----SSSEEECCC----CTTSCE
T ss_pred CCCCCcEeEEEEE-CCeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccCC-----CCCEEEccccc-cCCCCcE
Confidence 3567899998755 5668899999987777776 9999999878889765221110 00112233345 7899999
Q ss_pred EEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCC-----CCCcceEEEEEEecCCc
Q psy12060 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ-----NAPNIYYKIFWRKKNDT 931 (978)
Q Consensus 857 ~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~-----~g~i~~Y~i~~~~~~~~ 931 (978)
.|||+|.| .|.|+.++.. .|.+.+..+++||. +.+.... ++|.|+|+| +...+ +|.+.+|+|.|++.+..
T Consensus 75 ~~rV~A~n-~~~S~~s~~~-~f~~~~~~~~~pP~-v~~~~~~-~si~v~w~P-~~~~~~~~~~~g~~l~Y~v~y~~~~~~ 149 (306)
T 3s98_A 75 KLRIRAEK-ENTSSWYEVD-SFTPFRKAQIGPPE-VHLEAED-KAIVIHISP-GTKDSVMWALDGLSFTYSLVIWKNSSG 149 (306)
T ss_dssp EEEEEEEC-SSCEEEEECC-CBCHHHHCBCCCCE-EEEEECS-SCEEEEEEC-C---CCCC-----CCEEEEEEEETTTC
T ss_pred EEEEEEEe-CCcCCCEeee-eEechhhCccCCCe-EEEEEcC-CEEEEEEEC-CCCCCcceeccCCcEEEEEEEEECCCC
Confidence 99999999 8888776543 67666666667885 7776544 589999995 33322 58899999999987754
Q ss_pred c-ceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEec--CCCCCCCCCC
Q psy12060 932 E-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN--DVGPGPESEV 978 (978)
Q Consensus 932 ~-~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n--~~G~gp~S~~ 978 (978)
. |. .. . . ...+.|.+|+|++.|.|+|+|+| .+|.|++|++
T Consensus 150 ~~~~-~~--~--~--~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~ 192 (306)
T 3s98_A 150 VEER-IE--N--I--YSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPV 192 (306)
T ss_dssp CCEE-EE--E--E--CTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCC
T ss_pred CeEE-Ee--c--c--cceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCc
Confidence 3 33 11 1 1 13477999999999999999999 7899999974
No 307
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.76 E-value=3.9e-18 Score=165.30 Aligned_cols=161 Identities=18% Similarity=0.293 Sum_probs=124.8
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEeeCCEE--ecC------------CCcEEEe----e--cCcEEEccccCCCCEEE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGS------------GGRRKIF----E--NGNLLISPVSRDDSGIY 656 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~--~~~------------~~~~~~~----~--~~~l~i~~~~~~d~G~Y 656 (978)
.+.+.+|++++|.|.+.+.|.+.+.|++++.. +.. ..+.... . ..+|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 34578999999999999999999999998853 210 1223322 2 23499999999999999
Q ss_pred EEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeee
Q psy12060 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 736 (978)
Q Consensus 657 ~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~ 736 (978)
+|.+.|..| .+.|.|...+ .++...+..|+.++|.|.+.+.|.+ .+.|++++..+ .
T Consensus 84 ~C~~~~~~~----~~~l~V~~~~-----~~~~~~v~~g~~~~l~C~~~~~p~~--~v~W~~~~~~~-------------~ 139 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGLT-----ANSDTHLLQGQSLTLTLESPPGSSP--SVQCRSPRGKN-------------I 139 (184)
T ss_dssp EEEETTEEE----EEEEEEEEEE-----ESSCSEEETTCCEEEEEECCTTCCC--EEEEECTTSCE-------------E
T ss_pred EEEEEcCCC----cEEEEEEEec-----CCCCceeecCCCEEEEEEcCCCCCC--EEEEEeCCCcc-------------c
Confidence 999988754 4455555311 2344578899999999999887654 66999987543 2
Q ss_pred cCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCC
Q psy12060 737 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781 (978)
Q Consensus 737 ~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P 781 (978)
.....|.|.++..+|+|.|+|.|.|..|..+..+.|.|.+.|.+|
T Consensus 140 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~ 184 (184)
T 2ny1_B 140 QGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS 184 (184)
T ss_dssp EESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC--
T ss_pred cCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCCC
Confidence 245789999999999999999999999999999999999988764
No 308
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.76 E-value=3.9e-18 Score=176.90 Aligned_cols=192 Identities=18% Similarity=0.208 Sum_probs=122.0
Q ss_pred CCCCeeeecccCeEEEeCCCC--CCCCceEEEecccccccccc----------------cceEEEee-----CCcEEEee
Q psy12060 301 KRAPEIGNQNWGKAMFCDPPT--NYPGVNYYWARDYFPNFVEE----------------DKRVFVSY-----DGALYFSA 357 (978)
Q Consensus 301 ~~~~~~~~~~~~~~l~C~~~~--~~p~~~i~W~~~~~~~~~~~----------------~~~~~~~~-----~~~L~i~~ 357 (978)
.+....+.+|+.++|.|.+.. +.|.+.|.|+|++....... ..++.+.. +++|.|.+
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 90 (268)
T 3mj6_A 11 SSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQD 90 (268)
T ss_dssp -CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECS
T ss_pred CCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECC
Confidence 344567789999999999842 56778999999764321110 13444322 26799999
Q ss_pred eeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEE---eecCCCeeEEE
Q psy12060 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA---FGYPVPSYNWT 434 (978)
Q Consensus 358 ~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~---~g~p~~~v~W~ 434 (978)
++.+|+|.|+|.+.+..+.. .....+.|.|....+ ....+.+|++++|.|.+ .+.|.+.|+|+
T Consensus 91 v~~~D~G~Y~C~~~~~~~~~-~~~~~~~l~V~~~~p-------------~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~ 156 (268)
T 3mj6_A 91 VQKADEGIYTCEIRLKNESM-VMKKPVELWVLPEEP-------------RDLRVRVGDTTQMRCSIQSTEEKRVTKVNWM 156 (268)
T ss_dssp CCGGGCEEEEEEEEETTCCC-EEEEEEEEEEECCCC-------------SEEEEETTCCEEECCBCEESSSSCCCEEEEE
T ss_pred CCHhHCEEEEEEEEecCCcc-eEEEEEEEEEeccCC-------------CccccccCCcEEEEEEecCCCCCCccceEEE
Confidence 99999999999999865322 122335666652211 12356799999999999 56788999999
Q ss_pred EcCccCCCCc------------------e----------eeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEE
Q psy12060 435 RRGSPLPRNA------------------Y----------FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQ 486 (978)
Q Consensus 435 ~~~~~l~~~~------------------~----------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 486 (978)
+++....... + ......+|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 236 (268)
T 3mj6_A 157 FSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVV 236 (268)
T ss_dssp EECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEE
Confidence 9543321110 0 01235689999999999999999999999999999999994
Q ss_pred -eeceeeccCCcccccCCCce
Q psy12060 487 -AEPNFTIPLTDKHMDNQADL 506 (978)
Q Consensus 487 -~~p~~~~~~~~~~~~~g~~~ 506 (978)
.+|.+.+.+....+..|+.+
T Consensus 237 ~~~p~~~~~p~~~~~~~~q~~ 257 (268)
T 3mj6_A 237 QDEFQRTISPTPPTDKGQQGI 257 (268)
T ss_dssp CC-------------------
T ss_pred cCCCeeeeCCCCCCCCcceec
Confidence 45666666666666666543
No 309
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.76 E-value=1.2e-17 Score=165.76 Aligned_cols=174 Identities=19% Similarity=0.292 Sum_probs=128.9
Q ss_pred eecCCCeEEEEEeeccCCCCeeEEeeCCEEec-------------------CCCcEEEeecCcEEEccccCCCCEEEEEE
Q psy12060 599 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-------------------SGGRRKIFENGNLLISPVSRDDSGIYSCT 659 (978)
Q Consensus 599 ~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~-------------------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 659 (978)
.+.+|++++|.|.+.+.+.+.+.|++++.... ...+..+..+++|.|.+++.+|+|.|+|.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~ 89 (208)
T 3r4d_A 10 QVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLD 89 (208)
T ss_dssp EEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEEE
T ss_pred eeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEEE
Confidence 47899999999998888888999998753211 12355556667899999999999999999
Q ss_pred EEeCC-ceeeeeEEEEEEeCCceeee-CCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeec
Q psy12060 660 ATNVH-GMDESKGRLIVLHGPSYYEQ-LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 737 (978)
Q Consensus 660 a~n~~-g~~~~~~~l~v~~~p~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~ 737 (978)
+.|.. +.......|.|..++..+.. ..... +..|+.+.|.|.+.+.| + .+.|+++|..+.... ......
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~-~~~g~~v~l~C~~~~~p-p--~i~W~~~g~~l~~~~-----~~~~~~ 160 (208)
T 3r4d_A 90 MTDENYRRTQATVRFHVHQPVTQPFLQVTNTT-VKELDSVTLTCLSNDIG-A--NIQWLFNSQSLQLTE-----RMTLSQ 160 (208)
T ss_dssp EECSSCEEEEEEEEEEEECCCCCCEEEESCSS-CCTTCCEEEEEECSCTT-C--EEEEEETTEECCCCS-----SEEEET
T ss_pred EEcccCceeEEEEEEEeccCCCCCEEecCCce-EeeCCCEEEEEECCCCC-C--ceEEEECCEeCCCCC-----CeEEcC
Confidence 99985 56666778888765432221 12222 78899999999999865 4 679999999886422 123344
Q ss_pred CCceEEEeccCCCCCEEEEEEEEcCCCcee-eeEEEEEcCCCCCC
Q psy12060 738 DGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLP 781 (978)
Q Consensus 738 ~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s-~~~~l~v~~~P~~P 781 (978)
.+..|.|.++..+|+|.|+|.|.|..|... ..+.|.|..||..+
T Consensus 161 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~~ 205 (208)
T 3r4d_A 161 NNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHHH 205 (208)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC------
T ss_pred CCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCccc
Confidence 558999999999999999999999999754 46788888777554
No 310
>1wk1_A Hypothetical protein YK1067A12; lectin C-type domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Caenorhabditis elegans} SCOP: d.169.1.1
Probab=99.76 E-value=1.4e-18 Score=160.53 Aligned_cols=119 Identities=18% Similarity=0.140 Sum_probs=100.3
Q ss_pred eccCeeEEEEccCC---CCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcCCCCC
Q psy12060 35 QYRDSCYRFVKSPL---KTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTNL 111 (978)
Q Consensus 35 ~~~~~Cy~~~~~~~---~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~dg~~~ 111 (978)
.|+++||+|+.. . ++|.+|+..|+.+||+||+|++++|++||.+++.. ..+||||.+ ..++.|.|.||+++
T Consensus 2 ~~~~~CY~~~~~-~~~~~~w~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~----~~~WIGl~~-~~~~~w~W~dg~~~ 75 (150)
T 1wk1_A 2 SSGSSGVKFLTV-NDDILSMPQARNFCASAGGYLADDLGDDKNNFYSSIAAN----TQFWIGLFK-NSDGQFYWDRGQGI 75 (150)
T ss_dssp CCSSCCCCSSSC-CSSCBCHHHHHHHHHHHTCEECCCCSHHHHHHHHHHTTT----CEEEEEEEE-CSSSCEEECCSSSS
T ss_pred ccCCEEEEEEec-CCCccCHHHHHHHHHhCCCEEeeeCCHHHHHHHHHhhcc----CCEEEEEEe-CCCCcEEeCCCCcc
Confidence 478999999988 6 89999999999999999999999999999998843 369999999 88999999999998
Q ss_pred C------cccccCCCCCCCc-ccCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 112 N------ELDAAFLPEPADN-VQRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 112 ~------~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
. . +..|.+++|++ ..++|+.+..........|.+..|.....|+|+..
T Consensus 76 ~~~~~~~~-y~~W~~geP~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~~~~fICe~~ 130 (150)
T 1wk1_A 76 NPDLLNQP-ITYWANGEPSNDPTRQCVYFDGRSGDKSKVWTTDTCATPRPFICQKH 130 (150)
T ss_dssp CCEECCCS-CCCBCTTCSCCCSSCCEEEEESSCSCGGGCEEEECTTSCBCCCEECC
T ss_pred ccccccCC-cCCCCCCCCCCCCCCCcEEEeCccCCCCCEEeCcCcCCCeeEEEeec
Confidence 4 3 35688888876 46899999743212234789999999999999983
No 311
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.76 E-value=3.1e-18 Score=165.60 Aligned_cols=146 Identities=20% Similarity=0.330 Sum_probs=109.7
Q ss_pred ccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEe-CCCCCCCeEEEEEEEcCCCceeeEE
Q psy12060 500 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY-LNPERDPAMYQCRAKNQLKTRYSSA 578 (978)
Q Consensus 500 ~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~~d~G~Y~C~a~n~~g~~~~~~ 578 (978)
...|++++|.|.+.+ +. .|+|+|+|..+... .++.|.|.+ +.. +|+|.|+|.|.|..|......
T Consensus 11 ~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~------------~~~~L~I~~~~~~-~D~G~Y~C~a~n~~g~~~~~~ 75 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DE-NLKWEKNGQELPQK------------HDKHLVLQDFSEV-EDSGYYVCYTPASNKNTYLYL 75 (186)
T ss_dssp EEETTEEEEECSSCC-CT-TCEEEETTEEECSC------------CCSEEEEESCCTT-TSCEEEEEECSSCCCCCCEEE
T ss_pred EeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC------------CCCEEEECCCCcc-ccCEEEEEEEEeCCCcEEEEE
Confidence 467999999999987 43 49999999998732 234799999 886 999999999999988755554
Q ss_pred EEEEEEcCCccc---------------cCCC----Ccc---eeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEE
Q psy12060 579 QLRVLTLKPSFK---------------KRPL----ESE---TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 636 (978)
Q Consensus 579 ~l~v~~~~p~~~---------------~~~~----~~~---~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~ 636 (978)
.+.|....+... +.+. ... ..+.+|+++.|.|.+ |.|.|+|+|+|..+.....
T Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-- 150 (186)
T 1jbj_A 76 KARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-- 150 (186)
T ss_dssp CCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC--
T ss_pred EEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC--
Confidence 444432211110 0000 000 124489999999998 7889999999999874432
Q ss_pred EeecCcEEEccccCCCCEEEEEEEEeCCcee
Q psy12060 637 IFENGNLLISPVSRDDSGIYSCTATNVHGMD 667 (978)
Q Consensus 637 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 667 (978)
..+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 151 --~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 --TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp --CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred --CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 45679999999999999999999998876
No 312
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.76 E-value=5.2e-18 Score=187.06 Aligned_cols=220 Identities=11% Similarity=0.020 Sum_probs=88.8
Q ss_pred CCceEEEeccCCCCCEEEEEEEEcC--CCce--eeeEEEEEc--CCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeE
Q psy12060 738 DGGLLEITNASFADAGEYECVVKST--VGKI--STKTTVIVE--GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 811 (978)
Q Consensus 738 ~~~~l~i~~~~~~d~g~Y~c~a~n~--~G~~--s~~~~l~v~--~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y 811 (978)
....+.|.++.....+.++..|.|. .|.. +....+... .++.+|.++.+... ..++.|+|.+|. .+.+|
T Consensus 161 ~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~-~~~~~l~W~pp~----~~~~Y 235 (414)
T 3se4_A 161 IYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ-NQNYVLKWDYTY----ANMTF 235 (414)
T ss_dssp ECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEE-TTEEEEEEECSS----SSCEE
T ss_pred CCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEe-cCCeEEEECCCC----CCeEE
Confidence 3457888888776666666777784 3433 323333332 24567888888655 468999999974 24599
Q ss_pred EEEEeec--------cccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCC
Q psy12060 812 KIIARTN--------WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 883 (978)
Q Consensus 812 ~v~~~~~--------~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~ 883 (978)
.|+|+.. +...|.....-.. .......+.++|.+++.|.|||+|.|..|.|+.|+.. .+.+.++
T Consensus 236 ~v~y~~~~~~~~~~~~~~~w~~~~~~~~-------~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~-~~~t~~~ 307 (414)
T 3se4_A 236 QVQWLHAFLKRNPGNHLYKWKQIPDCEN-------VKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEI-KFDTEIQ 307 (414)
T ss_dssp EEEEEESGGGSCCCC--CCCCBCSTTTT-------BSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCE-EEETTCC
T ss_pred EEEEEehhccccccccccCceECCCccC-------CCCCEEcCCcccccCccEEEEEEEecCCCcccccccc-cccchhc
Confidence 9999863 2456754311000 1234455552399999999999999999999988765 7888888
Q ss_pred CCCCCCCceeecccccCcEEEEEEeCCCCC----CCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceee
Q psy12060 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREK----QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959 (978)
Q Consensus 884 ~P~~~P~~~~~~~~~~~si~v~W~~p~~~~----~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 959 (978)
.++++|. +.+... .++|.|+|++|.... .+|.+.+|.|.|++.+...... +. .....+.|.+|+|++.
T Consensus 308 ~~~~pP~-l~~~~~-~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~~~--~~----~~~~~~~l~~L~p~t~ 379 (414)
T 3se4_A 308 AFLLPPV-FNIRSL-SDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERK--II----EKKTDVTVPNLKPLTV 379 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCe-EEEEEC-CCeEEEEEECCCCccccchhhcCCeEEEEEEEECCCCceEE--EE----ecCCeEEeCCCCCCCe
Confidence 8889998 888754 579999999954322 1247899999887765332111 11 1224577999999999
Q ss_pred EEEEEEEec----CCCCCCCCCC
Q psy12060 960 YEVKVQAIN----DVGPGPESEV 978 (978)
Q Consensus 960 Y~~~V~A~n----~~G~gp~S~~ 978 (978)
|.|+|+|.+ .+|.|++|++
T Consensus 380 Y~~~V~A~~~~~~~~g~g~~S~~ 402 (414)
T 3se4_A 380 YCVKARAHTMDEKLNKSSVFSDA 402 (414)
T ss_dssp -----------------------
T ss_pred EEEEEEEEecccccCCCCCCCCC
Confidence 999999999 3699999864
No 313
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.76 E-value=9.5e-18 Score=165.41 Aligned_cols=171 Identities=15% Similarity=0.158 Sum_probs=124.9
Q ss_pred ceeecCCCeEEEEEeeccCCC-----CeeEEee-CCEEecCCCcEEEeec------CcEEEccccCCCCEEEEEEEEeCC
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPK-----PKFVWKK-DGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVH 664 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~-----~~i~W~~-~g~~~~~~~~~~~~~~------~~l~i~~~~~~d~G~Y~C~a~n~~ 664 (978)
.+.+.+|+++.|.|.+.+.|. +.+.|++ ++.......+..+..+ .+|.|.+++.+|+|.|+|.|.|..
T Consensus 11 ~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 90 (202)
T 3bp6_B 11 VYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGA 90 (202)
T ss_dssp EEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCC
Confidence 455889999999999999886 7999999 5554444555555433 469999999999999999999999
Q ss_pred ceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCC--ceE
Q psy12060 665 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--GLL 742 (978)
Q Consensus 665 g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~--~~l 742 (978)
|.....+.|.|..++..+... ...+..|+.+.|.|.+.+.|.| .+.|++++..+... .....++ ..+
T Consensus 91 ~~~~~~~~l~V~~~~~~p~~~--~~~~~~g~~v~l~C~~~g~P~p--~v~W~~~~~~~~~~-------~~~~~~~~~~~~ 159 (202)
T 3bp6_B 91 AWDYKYLTVKVKASYMRIDTR--ILEVPGTGEVQLTCQARGYPLA--EVSWQNVSVPANTS-------HIRTPEGLYQVT 159 (202)
T ss_dssp EEEEEEEEEEEEBCCCCEEEE--EEECTTTCCEEEEEEEEEBSCC--EEEETTCCSCCEEE-------EEECTTSCEEEE
T ss_pred CcceEEEEEEecCCCCcccEE--EEecCCCCeEEEEEEccccCCc--eEEEEeCCCCccCc-------eeeCCCCCEEEE
Confidence 988888888887654322110 1134579999999999998765 45999987654321 1111112 356
Q ss_pred EEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCC
Q psy12060 743 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 778 (978)
Q Consensus 743 ~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P 778 (978)
.|..+..+|+|.|+|.|.|..|..+..+.|.|..+.
T Consensus 160 ~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~ 195 (202)
T 3bp6_B 160 SVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRM 195 (202)
T ss_dssp EEEEECCCTTCCEEEEEEETTTTEEEEEEECC----
T ss_pred EEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCcC
Confidence 677888999999999999999999988888876543
No 314
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.75 E-value=7.1e-18 Score=165.83 Aligned_cols=183 Identities=14% Similarity=0.164 Sum_probs=118.6
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVE 267 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 267 (978)
++|.|...|. ..+ .+|++++|+|.+. .|.+.+.|||+|..+...... ........++.|.|.++ +.+
T Consensus 7 ~~P~i~~~p~-~~v-----~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~-----~~~~~~~~~~~l~I~~v-~~~ 73 (201)
T 1nkr_A 7 RKPSLLAHPG-PLV-----KSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLI-----GEHHDGVSKANFSISRM-TQD 73 (201)
T ss_dssp CCCEEEEESC-SEE-----ETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEE-----CEEETTEEEEEEEESSC-CGG
T ss_pred CCCeEEEEcC-Ccc-----CCCCcEEEEEecc-CCCCEEEEEECCCcCCcceee-----eecCCCCceEEEEeccC-Ccc
Confidence 4688888886 333 3467799999998 477899999998654211000 00000124568999987 899
Q ss_pred CCeEEEEEEEeCc----eeEEeEEEEEEEeee---cccccCCCCeeeecccCeEEEeCCCCCCCCceEEEeccccccccc
Q psy12060 268 DRGSYHCKASNKF----GSIISESVQLAFGFI---GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE 340 (978)
Q Consensus 268 d~G~Y~C~a~n~~----g~~~s~~~~l~v~~~---~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~ 340 (978)
|+|.|+|.|.|.. +...+..+.|.|... |.+...+ ...+.+|+.++|.|.+. + +.+.|.|+|+|..+...
T Consensus 74 D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~~ 150 (201)
T 1nkr_A 74 LAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQP-GPTVLAGENVTLSCSSR-S-SYDMYHLSREGEAHERR 150 (201)
T ss_dssp GCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEES-CSEECTTCEEEEEEEES-S-CCSEEEEEETTCSSCEE
T ss_pred cCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCC-CCccCCCCeEEEEEeCC-C-CCceEEEEECCcccCcc
Confidence 9999999998753 233456677777543 2222222 24678899999999985 3 56789999999775432
Q ss_pred ccceEEEe--eCCcEEEeeeeeecceeeEEEEEeeccc--ccccCCceeEEE
Q psy12060 341 EDKRVFVS--YDGALYFSALEQIDAGNYSCNVQSKVSD--TGRNGPFFPLKV 388 (978)
Q Consensus 341 ~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~n~~~~--~~~~~~~~~l~V 388 (978)
........ .++.|.|.+++ |+|.|+|.|.+.... ....+..+.|.|
T Consensus 151 ~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~~~~~~s~~S~~~~l~V 200 (201)
T 1nkr_A 151 LPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHDSPYEWSKSSDPLLVSV 200 (201)
T ss_dssp EECEEEETTEEEEEEEEEECC--SCEEEEEEEEETTEEEEECCCCCCEEEEE
T ss_pred cccccccCCceEEEEEeCCcC--CCeeEEEEEEcCCCCCcCCCCCCCEEEEe
Confidence 11111111 14579999998 999999999875321 122344455555
No 315
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.75 E-value=1.8e-18 Score=169.73 Aligned_cols=155 Identities=20% Similarity=0.309 Sum_probs=106.6
Q ss_pred cccCcEEEEEEeecCCCCeEEEEEcccccccccccccCCCCCCceEeecceEEEeCCCCCCCCeEEEEEEEeCceeEEeE
Q psy12060 207 SILNDITLSCYAGGYPNPSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDPRQVEDRGSYHCKASNKFGSIISE 286 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~ 286 (978)
.+|+.++|+|.+ |.+.|+|+|+|..+... ...+++|.|.++ +.+|+|.|+|.+.+.. +.
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------------~~~~~~L~i~~v-~~~DsG~Y~C~~~~~~----s~ 74 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------------TEDKKKWNLGSN-AKDPRGMYQCKGSQNK----SK 74 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEETTEEEEEE-------------ESSCCCEEEEEG-GGCCEEEEEEESSSSC----CC
T ss_pred cCCCeEEEEEcC---CCCEEEEEECCEECCCC-------------CCCCCeEEeCCC-CcCCCEEEEEEecCCC----Ce
Confidence 357889999998 78999999999654210 113567999987 8999999999976532 22
Q ss_pred EEEEEEee--------------------------e----cccccCCCCeeee-cccCeEEEeCCCCCCCCceEEEecccc
Q psy12060 287 SVQLAFGF--------------------------I----GEFNLKRAPEIGN-QNWGKAMFCDPPTNYPGVNYYWARDYF 335 (978)
Q Consensus 287 ~~~l~v~~--------------------------~----~~~~~~~~~~~~~-~~~~~~l~C~~~~~~p~~~i~W~~~~~ 335 (978)
.+.|.+.. . +.... ..+..+. +|+.++|.|. +.|.+.|+|+|++.
T Consensus 75 ~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~v~~~G~~v~L~C~---g~p~p~i~W~k~~~ 150 (204)
T 1sy6_A 75 PLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGIT-QTPYKVSISGTTVILTCP---QYPGSEILWQHNDK 150 (204)
T ss_dssp CEEEEEEC-------------------------------------CCCCEEEEETTEEEEECS---CCCSSCEEEEETTE
T ss_pred eEEEEEEEecccccccccccccccccccccccccccccccccee-cCCceeeecCCcEEEEcC---CCCCCceEEEECCE
Confidence 34444430 0 11111 1223333 8999999998 56888999999998
Q ss_pred cccccccceEEEeeCCcEEEeee-eeecceeeEEEEEeecccccccCCceeEEE
Q psy12060 336 PNFVEEDKRVFVSYDGALYFSAL-EQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (978)
Q Consensus 336 ~~~~~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V 388 (978)
++......+.....+++|.|.++ +.+|+|.|+|.|.|..|. ..+..+.|.|
T Consensus 151 ~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~--~~s~~l~l~~ 202 (204)
T 1sy6_A 151 NIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPE--DANFYLYLRA 202 (204)
T ss_dssp EESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGG--GSSCEEEEEE
T ss_pred ECCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCC--ceeEEEEEEE
Confidence 75443223333345789999999 999999999999998863 2234455554
No 316
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.75 E-value=5e-18 Score=169.12 Aligned_cols=166 Identities=17% Similarity=0.288 Sum_probs=121.9
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcC--ccCC------------CCcee----eecccEEEeCCCCCCCCeEEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRG--SPLP------------RNAYF----ENFNRILTIPNVKVEDQGEYICRA 470 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~l~------------~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a 470 (978)
..+.+|++++|.|.+.+.|.+.|.|+|.+ ..+. ...++ ...+.+|.|.+++.+|+|.|+|.|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (213)
T 3mj8_L 10 VSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQS 89 (213)
T ss_dssp EEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEe
Confidence 35679999999999999999999999932 2110 11111 223457999999999999999999
Q ss_pred EeCCC---ceEEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCCCC---CCCC
Q psy12060 471 SNDRS---ALESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSETL---PLED 538 (978)
Q Consensus 471 ~n~~g---~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~---~~~~ 538 (978)
.+..+ .....+.|.|. .+|.+...+....+.+|+.++|.|.+.+. |. +.|.|+|+|..+..... ...
T Consensus 90 ~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~- 168 (213)
T 3mj8_L 90 WDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSK- 168 (213)
T ss_dssp EETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEE-
T ss_pred ccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCc-
Confidence 99887 34456788888 67887776666666699999999999985 43 59999999998864210 000
Q ss_pred CCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceee
Q psy12060 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576 (978)
Q Consensus 539 ~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 576 (978)
..........|.|..+.. +|+|.|+|.|.|..+....
T Consensus 169 ~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~~~~~ 205 (213)
T 3mj8_L 169 SDSKYMATSYLTMTADAW-KSRNTFICKVTHGGNTVEK 205 (213)
T ss_dssp ETTEEEEEEEEEEESHHH-HSCSCEEEEEEETTEEEEE
T ss_pred cCCcEEEEEEEEEeHHHc-CCCCEEEEEEEECCccEEe
Confidence 112222345688998886 8999999999998765443
No 317
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.75 E-value=7.4e-18 Score=169.18 Aligned_cols=179 Identities=19% Similarity=0.337 Sum_probs=123.1
Q ss_pred CeeeecccCeEEEeCCCCCCCC-----ceEEEeccccccc-----------ccccceEEEee------CCcEEEeeeeee
Q psy12060 304 PEIGNQNWGKAMFCDPPTNYPG-----VNYYWARDYFPNF-----------VEEDKRVFVSY------DGALYFSALEQI 361 (978)
Q Consensus 304 ~~~~~~~~~~~l~C~~~~~~p~-----~~i~W~~~~~~~~-----------~~~~~~~~~~~------~~~L~i~~~~~~ 361 (978)
+..+.+|+.++|.|.+. +.|. +.|.|+|++.... .....+..+.. +++|.|.+++.+
T Consensus 4 ~v~~~~G~~v~L~C~~~-~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFS-PEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCTTSCEEECCBCC-CCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CEEEECCCCeEEEEEec-CCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 34567899999999984 3332 7899999875431 11234444433 567999999999
Q ss_pred cceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEE-eecCCCeeEEEE-cCcc
Q psy12060 362 DAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTR-RGSP 439 (978)
Q Consensus 362 d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~v~W~~-~~~~ 439 (978)
|+|.|+|.+.+.. ..+..+.|.|..++..+.+...+ ...+.+|+.++|.|.+ .|.|.+.|.|++ ++..
T Consensus 83 D~G~Y~C~~~~~~----~~~~~~~l~V~~~~~~p~i~~~~------~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~ 152 (222)
T 4i0k_A 83 DEGSYTCFVSIQD----FDSAAVSLQVAAPYSKPSMTLEP------NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVP 152 (222)
T ss_dssp GCSCEEEEEEECC----CCCCCCCCCCCBCCCCCEEECCC-----------CCSEEEEEEEEEEEBSCCEEEEECTTSCB
T ss_pred cCEEEEEEEEeCC----CceEEEEEEEEcCCCCCcEEeCC------CceecCCceEEEEEecccccCCCeEEEEcCCCcc
Confidence 9999999999853 22334667777654444333322 1356789999999999 789999999999 4555
Q ss_pred CCCCcee---eecc---cEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEeeceeec
Q psy12060 440 LPRNAYF---ENFN---RILTIPNVKVEDQGEYICRASNDRSALESSVTISIQAEPNFTI 493 (978)
Q Consensus 440 l~~~~~~---~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 493 (978)
+...... ...+ ..|.|.++..+|+|.|+|.|.|..|....++.|.|..+|....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 212 (222)
T 4i0k_A 153 LTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFP 212 (222)
T ss_dssp CCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC------
T ss_pred CCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccccC
Confidence 5433221 1112 2488999999999999999999999999999999998885443
No 318
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.75 E-value=5.2e-18 Score=178.13 Aligned_cols=172 Identities=11% Similarity=0.060 Sum_probs=126.9
Q ss_pred CCCCCCCceEEEEe-----eCCeeEEEeecC--CCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEee
Q psy12060 776 GPPGLPGGVQVVEV-----HKTSATIQWTDG--ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 848 (978)
Q Consensus 776 ~~P~~P~~~~~~~~-----~~~~v~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (978)
++|..|.++..... +.+++.|+|+++ .+.+++|.+|.|+|+..+...+. . ......+.+
T Consensus 2 ~~Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~~-~-------------~~~~~~~~~ 67 (290)
T 3l5i_A 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQN-Y-------------TVNATKLTV 67 (290)
T ss_dssp CCCSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCEE-E-------------EESSSEEEE
T ss_pred CCCCCCCceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcCcee-E-------------ecCCcEEEE
Confidence 57888888765432 358999999984 36688999999999876543221 1 112346788
Q ss_pred ccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEec
Q psy12060 849 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 928 (978)
Q Consensus 849 ~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~ 928 (978)
|.|++.|.|+|.|.|..|.|+++... +.+....|+.+|.++.+...+ ++|.|+|++|.. .|.+|+|+|+..
T Consensus 68 -l~p~t~Y~~~V~A~n~~G~s~~s~~~--~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~-----~i~~Y~v~~~~~ 138 (290)
T 3l5i_A 68 -NLTNDRYLATLTVRNLVGKSDAAVLT--IPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE-----SVKKYILEWCVL 138 (290)
T ss_dssp -EECSSCEEEEEEEEESSCBCCCEEEE--ECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS-----CCCEEEEEEEEE
T ss_pred -EcCCceEEEEEEEEcCCCCCCCceEE--eecccccCCCccceeEEEeCC-CeEEEEEeCCCC-----CCCcEEEEEEEC
Confidence 99999999999999999999877542 222223566778888887665 699999999432 799999999987
Q ss_pred CCcc-----ceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCC
Q psy12060 929 NDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975 (978)
Q Consensus 929 ~~~~-----~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~ 975 (978)
+... |.... ......+.+.+|.|++.|.|+|+|+|..|.|++
T Consensus 139 ~~~~~~~~~~~~~~-----~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~ 185 (290)
T 3l5i_A 139 SDKAPCITDWQQED-----GTVHRTYLRGNLAESKCYLITVTPVYADGPGSP 185 (290)
T ss_dssp CSSSCCCCEEEEEE-----TTCSEEECCSCCCTTCEEEEEEEEEETTEECCC
T ss_pred CCCCCCCcCeEEcc-----CCCcceEEecCcCCccEEEEEEEEEeCCccccc
Confidence 6442 33221 112234668999999999999999999999985
No 319
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.75 E-value=2.2e-17 Score=157.61 Aligned_cols=155 Identities=21% Similarity=0.321 Sum_probs=121.4
Q ss_pred eeecCCCeEEEEEeeccCC-CCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEE
Q psy12060 598 TYAGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 676 (978)
Q Consensus 598 ~~~~~g~~~~l~C~~~~~p-~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 676 (978)
..+.+|+++.|.|.+.+.| .+.+.|+++|..+... .+.+.+.+++.+|+|.|+|.+.|..+ ...+.|.|.
T Consensus 14 ~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~-------~~~~~~~~~~~~d~G~Y~C~~~~~~~--s~~~~l~v~ 84 (170)
T 3ry4_A 14 INVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH-------TQPSYRFKANNNDSGEYTCQTGQTSL--SDPVHLTVL 84 (170)
T ss_dssp SEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC-------CSSEEEEECCGGGCEEEEEEETTSBC--CCCEEEEEE
T ss_pred eEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC-------ccceEEEecccccCeEEEEEEeCCCc--eEeEEEEEE
Confidence 4478999999999999987 5699999999988754 34577889999999999999997543 345777777
Q ss_pred eCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEE
Q psy12060 677 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 756 (978)
Q Consensus 677 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 756 (978)
.+|.... ++...+..|+.+.|.|.+.+.+++ ..+.|+++|..+... ..+..|.|.++..+|+|.|+
T Consensus 85 ~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~~~~~-----------~~~~~L~i~~v~~~d~G~Y~ 150 (170)
T 3ry4_A 85 FEWLVLQ--TPHLEFQEGETIMLRCHSWKDKPL-VKVTFFQNGKSQKFS-----------HLDPTFSIPQANHSHSGDYH 150 (170)
T ss_dssp CCSEEEE--CSCSEECTTCCEEEEEEEGGGCCE-EEEEEEETTEEEEEE-----------SSCCEEEESSCCGGGCEEEE
T ss_pred CCceEec--CCCceeecCCeEEEEEECCCCCCC-ceEEEEECCeEcccc-----------CCCCeEEEEeccccCCEEEE
Confidence 7654332 345677899999999999654432 567999999876431 23568999999999999999
Q ss_pred EEEEcCCCc-eeeeEEEEEc
Q psy12060 757 CVVKSTVGK-ISTKTTVIVE 775 (978)
Q Consensus 757 c~a~n~~G~-~s~~~~l~v~ 775 (978)
|.|.|..|. .+..+.|.|+
T Consensus 151 C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 151 CTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp EEEEETTEEEECCCEEEEEC
T ss_pred EEEEeCcCccccccEEEEEC
Confidence 999999997 5566676653
No 320
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.75 E-value=7.7e-18 Score=167.73 Aligned_cols=163 Identities=20% Similarity=0.268 Sum_probs=116.9
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcCc--cC----------CC--Cceee----ecccEEEeCCCCCCCCeEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRGS--PL----------PR--NAYFE----NFNRILTIPNVKVEDQGEYICRAS 471 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~~--~l----------~~--~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~ 471 (978)
.+.+|++++|.|.+.+.|.+.|.|+|++. .+ .. ..++. ....+|.|.+++.+|+|.|+|.|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (213)
T 3d9a_L 12 SVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQS 91 (213)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEeee
Confidence 46799999999999999889999998642 11 00 11111 123489999999999999999999
Q ss_pred eCCCceE-EEEEEEEEe---eceeeccCCcccccCCCceeEEEEeec-CCCC-eeEEeECCEECCCC-C----CCCCCCC
Q psy12060 472 NDRSALE-SSVTISIQA---EPNFTIPLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELLNSE-T----LPLEDQD 540 (978)
Q Consensus 472 n~~g~~~-~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~~~~~~-~----~~~~~~~ 540 (978)
|..+... ..+.|.|.. +|.+...+.......|+.++|.|.+.| .|.+ .++|+|+|..+... . .......
T Consensus 92 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 171 (213)
T 3d9a_L 92 NSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDS 171 (213)
T ss_dssp SSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTC
T ss_pred cCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCC
Confidence 9876532 234677765 677766444444558999999999987 5654 89999999988643 0 0011112
Q ss_pred cEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCce
Q psy12060 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574 (978)
Q Consensus 541 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~ 574 (978)
.+ .....|.|.++.. +|+|.|+|.|.|.....
T Consensus 172 ~~-~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 172 TY-SMSSTLTLTKDEY-ERHNSYTCEATHKTSTS 203 (213)
T ss_dssp CE-EEEEEEEEEHHHH-HHCCEEEEEEECTTCSS
T ss_pred CE-EEEEEEEEecccc-CCCCEEEEEEEEccCCC
Confidence 22 2334899999986 89999999999987654
No 321
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.75 E-value=1.3e-17 Score=167.61 Aligned_cols=166 Identities=14% Similarity=0.198 Sum_probs=112.2
Q ss_pred CCCCCCCcEEEEEEEeecCCC---eeEEEEcCccCC-----CC------------ce-------eeecccEEEeCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYPVP---SYNWTRRGSPLP-----RN------------AY-------FENFNRILTIPNVKVE 461 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~---~v~W~~~~~~l~-----~~------------~~-------~~~~~~~L~i~~~~~~ 461 (978)
..+.+|++++|.|.+.+.+.+ .|+|+|++.... .+ .+ ....+.+|.|.+++.+
T Consensus 14 V~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 93 (226)
T 4f80_A 14 ILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTAS 93 (226)
T ss_dssp EEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGG
T ss_pred EEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchH
Confidence 346789999999999876554 699999764321 00 00 0122457999999999
Q ss_pred CCeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeec-CCCCeeEEeECCE-ECCCCCCCCCCC
Q psy12060 462 DQGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG-VPDVTYSWFRNGE-LLNSETLPLEDQ 539 (978)
Q Consensus 462 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~g~-~~~~~~~~~~~~ 539 (978)
|+|.|+|.|.|..|.....+.+.+ ++.+........+.+|+.+.|.|.+.| .|.|+|+|+|++. .+... .
T Consensus 94 D~G~Y~C~a~n~~~~~~~~v~~~~--~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~------~ 165 (226)
T 4f80_A 94 DSGKYLCYFQDGDFYEKALVELKV--AALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTV------E 165 (226)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEE--EBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCE------E
T ss_pred HCeeEEEEEECCCcEEEEEEEEee--ccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCC------c
Confidence 999999999998877665555444 443333444556788999999999987 5999999999654 44321 1
Q ss_pred CcEEE-ecC---EEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEE
Q psy12060 540 DRYFI-QDN---VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 583 (978)
Q Consensus 540 ~~~~~-~~~---~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 583 (978)
..... .++ .+.+..+.. +|+|.|+|.|.|..|....++.|.|.
T Consensus 166 ~~~~~~~~g~~~v~s~l~v~~-~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 166 APVVADGVGLYAVAASVIMRG-SSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp CCCEECTTSCEEEEEEEEECC-----CEEEEEEETTTTEEEEEEECCC
T ss_pred eEEEECCCCcEEEEEEEEech-hcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 11111 122 233445665 89999999999999998888877764
No 322
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.74 E-value=1.1e-17 Score=159.50 Aligned_cols=158 Identities=16% Similarity=0.148 Sum_probs=115.1
Q ss_pred eeeecccCeEEEeCC-CCCCCCceEEEec--ccccccc--------cccceEEEeeCCcEEEeeeeeecceeeEEEEEee
Q psy12060 305 EIGNQNWGKAMFCDP-PTNYPGVNYYWAR--DYFPNFV--------EEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSK 373 (978)
Q Consensus 305 ~~~~~~~~~~l~C~~-~~~~p~~~i~W~~--~~~~~~~--------~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 373 (978)
.....|+.++|.|.. +.+.+.+.|.|+| ++..+.. ....|+.+..+|+|.|.+++.+|+|.|+|.|.|.
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~ 88 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDT 88 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEET
T ss_pred EEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEeC
Confidence 356788999999954 3345678999999 8765421 2356777888899999999999999999999997
Q ss_pred cccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEE
Q psy12060 374 VSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRIL 453 (978)
Q Consensus 374 ~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L 453 (978)
.+.... ...+.|.|..+...+.+. ..+..++|.|.+.+.|.++|+|+++|..+ .. ....|
T Consensus 89 ~g~~~~-~~~~~L~V~~~~~~P~i~-------------~~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~-----~~~~i 148 (182)
T 1hnf_A 89 KGKNVL-EKIFDLKIQERVSKPKIS-------------WTCINTTLTCEVMNGTDPELNLYQDGKHL-KL-----SQRVI 148 (182)
T ss_dssp TSCEEE-EEEEEEEEECCCCCCEEE-------------EETTTTEEEEECSSCSSCEEEEEESSCEE-EE-----ESSCE
T ss_pred CCceeE-EEEEEEEEcCcCCCCEEE-------------EccCcEEEEeEccCCCCCEEEEEECCEEC-CC-----CCcEE
Confidence 654321 233678887643222111 12447999999999889999999999988 11 22344
Q ss_pred EeCCCCCCCCeEEEEEEEeCCCceEEEEEE
Q psy12060 454 TIPNVKVEDQGEYICRASNDRSALESSVTI 483 (978)
Q Consensus 454 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 483 (978)
.+.. ..+|+|.|+|.|.|..+..+....+
T Consensus 149 ~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 149 THKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp EEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred EEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 4433 4789999999999999987776554
No 323
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.74 E-value=1.4e-17 Score=172.74 Aligned_cols=200 Identities=15% Similarity=0.216 Sum_probs=124.6
Q ss_pred ceeeccCCcccccCCCceeEEEEee---cCCCCeeEEeECCEECCCCCC-----------CCCCCCcEEEec------CE
Q psy12060 489 PNFTIPLTDKHMDNQADLTWTCEAF---GVPDVTYSWFRNGELLNSETL-----------PLEDQDRYFIQD------NV 548 (978)
Q Consensus 489 p~~~~~~~~~~~~~g~~~~l~C~~~---~~p~~~i~W~~~g~~~~~~~~-----------~~~~~~~~~~~~------~~ 548 (978)
+.+...+....+.+|++++|.|.+. +.+.+.|.|+|++........ ......++.+.. ..
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 3455566667889999999999987 667889999996543221100 000123444322 67
Q ss_pred EEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEee---ccCCCCeeEEeeC
Q psy12060 549 LTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPKFVWKKD 625 (978)
Q Consensus 549 l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~---~~~p~~~i~W~~~ 625 (978)
|.|.+++. +|+|.|+|.+.|..+.......+.+... |. .+....+.+|+.++|.|.+ .+.|.+.+.|+++
T Consensus 86 L~I~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~l~V~-~~-----~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 86 LLLQDVQK-ADEGIYTCEIRLKNESMVMKKPVELWVL-PE-----EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp EEECSCCG-GGCEEEEEEEEETTCCCEEEEEEEEEEE-CC-----CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred EEECCCCH-hHCEEEEEEEEecCCcceEEEEEEEEEe-cc-----CCCccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 99999997 9999999999987665544443333321 11 1234568899999999999 6778899999984
Q ss_pred -CEEecC-----------------C----CcEEE-----eecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeC
Q psy12060 626 -GNIIGS-----------------G----GRRKI-----FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 678 (978)
Q Consensus 626 -g~~~~~-----------------~----~~~~~-----~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 678 (978)
+..+.. . .+..+ ...++|.|.++..+|+|.|+|.|.|..|.....+.|.|...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 238 (268)
T 3mj6_A 159 SGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQD 238 (268)
T ss_dssp CTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcC
Confidence 321110 0 12222 23457999999999999999999999999988999998665
Q ss_pred CceeeeCCCceEEEccc
Q psy12060 679 PSYYEQLPPKITIAAHR 695 (978)
Q Consensus 679 p~~~~~~~~~~~~~~g~ 695 (978)
|+.+...+....+..++
T Consensus 239 ~p~~~~~p~~~~~~~~q 255 (268)
T 3mj6_A 239 EFQRTISPTPPTDKGQQ 255 (268)
T ss_dssp -----------------
T ss_pred CCeeeeCCCCCCCCcce
Confidence 55444444444444443
No 324
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.74 E-value=1.6e-17 Score=161.67 Aligned_cols=161 Identities=19% Similarity=0.193 Sum_probs=114.5
Q ss_pred CeeeecccCeEEEeCCCCCCCCceEEEecccccccc-c---------------ccceEEEeeCCcEEEeeeeeecceeeE
Q psy12060 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFV-E---------------EDKRVFVSYDGALYFSALEQIDAGNYS 367 (978)
Q Consensus 304 ~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~-~---------------~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 367 (978)
...+.+|+.++|.|.+..+.+.+.|.|+|++..+.. . ...|+.+..+++|.|.+++.+|+|.|+
T Consensus 7 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~ 86 (193)
T 2if7_A 7 MVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYR 86 (193)
T ss_dssp EEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEEE
T ss_pred EEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceEE
Confidence 345678999999999864455579999998754321 0 013555666789999999999999999
Q ss_pred EEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCC-cEEEEEEEeec-CCCeeEEEEcCccCCCCce
Q psy12060 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGD-KVRLECVAFGY-PVPSYNWTRRGSPLPRNAY 445 (978)
Q Consensus 368 C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~-~~~l~C~~~g~-p~~~v~W~~~~~~l~~~~~ 445 (978)
|.+.+..+... ..+.|.|..++..+.+.... ..+..|. .++|.|.+.|. |.|+|+|++++..+..
T Consensus 87 C~~~~~~~~~~---~~~~L~V~~~~~~p~i~~~~-------~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~--- 153 (193)
T 2if7_A 87 AQISTKTSAKL---SSYTLRILRQLRNIQVTNHS-------QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS--- 153 (193)
T ss_dssp EEEECSSCEEE---EEEEEEEECCCEEEEEEECC-------C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES---
T ss_pred EEEEecCCCeE---EEEEEEEEccCCCCeEecCc-------eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC---
Confidence 99998765422 25788887765444333221 1223565 89999999984 5789999999887632
Q ss_pred eeecccEEEeCCCCCC-CCeEEEEEEEeCCCceEEEE
Q psy12060 446 FENFNRILTIPNVKVE-DQGEYICRASNDRSALESSV 481 (978)
Q Consensus 446 ~~~~~~~L~i~~~~~~-d~G~Y~C~a~n~~g~~~~~~ 481 (978)
+..|.|.....+ |+|.|+|.|.|..|..+..+
T Consensus 154 ----~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 154 ----QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp ----SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred ----CCeEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 345666544444 89999999999998876543
No 325
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.74 E-value=8.8e-18 Score=169.89 Aligned_cols=158 Identities=18% Similarity=0.328 Sum_probs=119.0
Q ss_pred CCCCCCCcEEEEEEEeecCC-CeeEEEEcCccCC----------C---Ccee-----------eecccEEEeCCCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYPV-PSYNWTRRGSPLP----------R---NAYF-----------ENFNRILTIPNVKVEDQ 463 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~-~~v~W~~~~~~l~----------~---~~~~-----------~~~~~~L~i~~~~~~d~ 463 (978)
..+.+|++++|.|.+.+.|. +.|.|+|++.... . ..+. ...++.|.|.+++.+|+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 89 (231)
T 2pet_A 10 VEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVGDE 89 (231)
T ss_dssp EEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGGGC
T ss_pred EEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCcccC
Confidence 35679999999999999885 8999999776532 0 1111 22235599999999999
Q ss_pred eEEEEEEEeCC-CceEEEEEEEEEeec---eeeccCCcccccCCCce-eEEEEe-ecCCCCeeEEeECCEECCCCCCCCC
Q psy12060 464 GEYICRASNDR-SALESSVTISIQAEP---NFTIPLTDKHMDNQADL-TWTCEA-FGVPDVTYSWFRNGELLNSETLPLE 537 (978)
Q Consensus 464 G~Y~C~a~n~~-g~~~~~~~l~V~~~p---~~~~~~~~~~~~~g~~~-~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~~ 537 (978)
|.|+|.|.+.. +..+..+.|.|..+| .+...+....+.+|+.+ +|.|.+ .+.|.+.+.|+|+|..+.....
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~--- 166 (231)
T 2pet_A 90 RDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVE--- 166 (231)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSS---
T ss_pred ceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccccc---
Confidence 99999999987 778888999999875 44555566667899988 999999 7899999999999999875421
Q ss_pred CCCcEEEe-------------cCEEEEEeCCCCCCCeEEEEEEEcC
Q psy12060 538 DQDRYFIQ-------------DNVLTIRYLNPERDPAMYQCRAKNQ 570 (978)
Q Consensus 538 ~~~~~~~~-------------~~~l~i~~~~~~~d~G~Y~C~a~n~ 570 (978)
...++.+. ...|.|.... .+|+|.|+|.|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~-~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 167 MNPEGYMTSRTVREASGLLSLTSTLYLRLRK-DDRDASFHCAAHYS 211 (231)
T ss_dssp CCSSEEEEEEEEECTTSCEEEEEEEEEECCG-GGGGCEEEEEEEEE
T ss_pred cccceeecceeEecCCCeEEEEEEEEEecch-hhCCceEEEEEEcC
Confidence 11122221 1457777544 36799999999995
No 326
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=3.3e-18 Score=172.32 Aligned_cols=173 Identities=15% Similarity=0.150 Sum_probs=119.2
Q ss_pred eeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeecccccccCCcee
Q psy12060 306 IGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFP 385 (978)
Q Consensus 306 ~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~ 385 (978)
.+.+|+.++|.|.+.. +...|.|+|+|..+............++.|.|.+++.+|+|.|+|.+.+..+. ...+..+.
T Consensus 17 ~v~~G~~VtL~C~~~~--~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~-s~~S~~~~ 93 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY--GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELW-SEPSNLLD 93 (242)
T ss_dssp EEETTCCEEEEEECCT--TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEE-CCCCCCEE
T ss_pred ccCCCCcEEEEEeeCC--CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCcc-ccCCcceE
Confidence 6788999999999843 45689999998764311111001112357999999999999999999875332 22344578
Q ss_pred EEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeE
Q psy12060 386 LKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGE 465 (978)
Q Consensus 386 l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~ 465 (978)
|.|......+.+...+ ...+.+|++++|.|.+.+. .+.|.|+|+|..+............|.|.+++.+|+|.
T Consensus 94 L~V~~~~~~P~i~~~p------~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~ 166 (242)
T 1p6f_A 94 LVVTEMYDTPTLSVHP------GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGT 166 (242)
T ss_dssp EEEECCSCCCEEEEES------CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCEE
T ss_pred EEeecccCCCceEccC------CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCccccCCCceEEEEeCCCccccCEE
Confidence 8887532222222111 1356799999999998764 45999999998775422223345789999999999999
Q ss_pred EEEEEEeCC---CceEEEEEEEEEee
Q psy12060 466 YICRASNDR---SALESSVTISIQAE 488 (978)
Q Consensus 466 Y~C~a~n~~---g~~~~~~~l~V~~~ 488 (978)
|+|.|.|.. ...+..+.|.|...
T Consensus 167 Y~C~a~n~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 167 YRCFGSYNNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp EEEEEEEETTEECCCCCCEEEEEEC-
T ss_pred EEEEEECCCCcccCCCCCEEEEEecc
Confidence 999999864 23455677888753
No 327
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.74 E-value=8.1e-17 Score=154.54 Aligned_cols=162 Identities=20% Similarity=0.265 Sum_probs=118.4
Q ss_pred CCCCCCcEEEEEEEeecCCC--eeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEe
Q psy12060 410 APKAGDKVRLECVAFGYPVP--SYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA 487 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~--~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 487 (978)
.|..|++++|.|.+ +.|.| .|+|++.+..+ ...........|.|.+++.+|+|.|.|.|.|..+.....+.|.|..
T Consensus 18 ~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l-~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~ 95 (210)
T 1gsm_A 18 AVALGASRQLTCRL-ACADRGASVQWRGLDTSL-GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYA 95 (210)
T ss_dssp EEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT-CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred EEeCCCCEEEEEEC-CCCCCCcceEEeeccccc-CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEe
Confidence 45689999999999 88888 99999987666 2223345567899999999999999999999988888899999999
Q ss_pred eceeeccCCcccccCCCceeEEEEeecC-CC----CeeEEeECCEECCCCCC-C--C--------CCCCcEEEecCEEEE
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGV-PD----VTYSWFRNGELLNSETL-P--L--------EDQDRYFIQDNVLTI 551 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~----~~i~W~~~g~~~~~~~~-~--~--------~~~~~~~~~~~~l~i 551 (978)
+|....... ..+..|+.+ |+|.+.+. |. ++|+|+|||++|..... . . ...........+|.+
T Consensus 96 ~P~~~~i~~-~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~ 173 (210)
T 1gsm_A 96 FPNQLTVSP-AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRL 173 (210)
T ss_dssp CCSEEEEES-SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEEC
T ss_pred cCCCcEEcc-ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEee
Confidence 997543222 267788888 99999975 63 58999999999964321 1 0 001111222234444
Q ss_pred EeCCCCCCCeEEEEEEEcCCCceee
Q psy12060 552 RYLNPERDPAMYQCRAKNQLKTRYS 576 (978)
Q Consensus 552 ~~~~~~~d~G~Y~C~a~n~~g~~~~ 576 (978)
.... ++|.+.|+|.|.+.......
T Consensus 174 ~~~~-~D~~~~~tC~a~~~L~~~~~ 197 (210)
T 1gsm_A 174 PPLG-TPVPPALYCQATMRLPGLEL 197 (210)
T ss_dssp CCCC-SSCCSEEEEEEEEEETTEEE
T ss_pred cCCc-ccCCceEEEEEEeeCCCCcc
Confidence 4444 46778999999987654433
No 328
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.74 E-value=2.1e-17 Score=164.09 Aligned_cols=165 Identities=15% Similarity=0.279 Sum_probs=115.9
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcC--ccC------------CCCceee----ecccEEEeCCCCCCCCeEEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRG--SPL------------PRNAYFE----NFNRILTIPNVKVEDQGEYICRA 470 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~l------------~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a 470 (978)
..+.+|++++|.|.+.+.|.+.|.|+|++ ..+ ....++. .....|.|.+++.+|+|.|+|.|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (210)
T 1lk3_L 10 LTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQ 89 (210)
T ss_dssp EEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEEE
Confidence 35679999999999999888899999953 221 0011111 12348999999999999999999
Q ss_pred EeCCCceE-EEEEEEEEe---eceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCC-C---CCCCCCC
Q psy12060 471 SNDRSALE-SSVTISIQA---EPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSE-T---LPLEDQD 540 (978)
Q Consensus 471 ~n~~g~~~-~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~-~---~~~~~~~ 540 (978)
.|..+... ..+.|.|.. +|.+...+....+..|+.++|.|.+.|. |. +.|.|+|+|..+... . ......+
T Consensus 90 ~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~ 169 (210)
T 1lk3_L 90 SWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKD 169 (210)
T ss_dssp CSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTT
T ss_pred EcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCC
Confidence 99876432 234667764 5766664444445589999999999874 54 489999999988643 0 0001111
Q ss_pred cEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCce
Q psy12060 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574 (978)
Q Consensus 541 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~ 574 (978)
........|.|..+.. +|+|.|+|.|.|.....
T Consensus 170 ~~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 170 STYSMSSTLSLTKADY-ESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CCEEEEEEEEEEHHHH-HTCCEEEEEEECTTCSS
T ss_pred CCEEEEEEEEEChHHh-ccCCcEEEEEEecCCCC
Confidence 1122234789999886 89999999999976543
No 329
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.74 E-value=3.1e-17 Score=170.63 Aligned_cols=252 Identities=17% Similarity=0.172 Sum_probs=150.9
Q ss_pred EEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeE
Q psy12060 691 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770 (978)
Q Consensus 691 ~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~ 770 (978)
+..|+.++|.|.+...+ .+.|.++|..... .++++|+|.++...|+|.|+|.| .|.....+
T Consensus 18 ~~~G~~v~l~C~~~~~~----~i~W~~~~~~~~~------------~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~ 78 (306)
T 3d85_D 18 DAPGEMVVLTCDTPEED----GITWTLDQSSEVL------------GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHS 78 (306)
T ss_dssp SCCCEEEEEECSSSCCS----SCEEEETTCCCCC------------EESSEEEEEECSGGGCEEEEEEE---TTEEEEEE
T ss_pred CccCCcEEEECCCCCCC----cCEEEECCccccC------------CCCCEEEEEecCcCCCceEEEee---CCcccceE
Confidence 44799999999988433 3589999874311 24679999999999999999999 36665555
Q ss_pred EEEEc-------------CCCCCCC--ceEEEEeeC-CeeEEEeecCCCCCCCceeEEEEEeeccccCceEeccccccee
Q psy12060 771 TVIVE-------------GPPGLPG--GVQVVEVHK-TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 834 (978)
Q Consensus 771 ~l~v~-------------~~P~~P~--~~~~~~~~~-~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~ 834 (978)
.+.|. .++.||. ++....... .+++.+|.++.+.+ ..+.|...+. .....|..+........
T Consensus 79 ~l~v~~~~~~~~~t~i~~~~~~pp~~~~lsC~~~~~~~~~~C~W~pg~~~~-l~~~~~~~r~-~~~~~~~~C~~~~~~~~ 156 (306)
T 3d85_D 79 LLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTD-LTFSVKSSRG-SSDPQGVTCGAATLSAE 156 (306)
T ss_dssp EEEEEEEETTEECCCSSCCCC---CCCCCEEEBSSSSSEEEEEEEESCCSS-EEEEEEEEEC-SSSCEEEEECCCEEEEE
T ss_pred EEEEEeccCCcceeeeecccCCCCCCCcceEEcCCcccCcEEEecCCCCCc-eeEEEEEEec-CCCCcceECCCCCCCcc
Confidence 55443 2233332 555533333 38999999977633 2344554422 11223444332111111
Q ss_pred eeecCCce-eeE----EeeccCCC----ceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccc-cCcEEE
Q psy12060 835 VDRYTGRK-EAS----IENVLVPW----STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK-IGDLSI 904 (978)
Q Consensus 835 ~~~~~~~~-~~~----~~~~L~p~----~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~-~~si~v 904 (978)
...+++.. .+. ... +-|+ ..|.|+|.|.|..|...++. .|.....+.+.||.++.+.... ...+.|
T Consensus 157 ~c~v~~~~~~~~~~c~~~~-~cp~~~~~~~y~~~V~A~n~lg~~s~~~---~f~~~~iVkPdPP~~l~~~~~~~~~~l~v 232 (306)
T 3d85_D 157 RVRGDNKEYEYSVECQEDS-ACPAAEESLPIEVMVDAVHKLKYEQYTS---SFFIRDIIKPDPPKNLQLKPLKNSRQVEV 232 (306)
T ss_dssp EEC--CEEEEEEEEEEETT-CCTTSCCCSCEEEEEEEEETTEEEEEEE---EECHHHHBCCCCCEEEEEEEC----CEEE
T ss_pred ceeecCccccceeeeeecc-ccccccccEEEEEEEEEEccCCccccce---EEEehhcEecCCCceEEEEEecCCCcEEE
Confidence 11111211 122 123 4455 48999999999999754432 2332233444689999998743 478999
Q ss_pred EEEeCCCCCCCCC----cceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 905 SWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 905 ~W~~p~~~~~~g~----i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
+|++|+ ..+++ ...|.|+|+..+...|..... .+.+ .+.| .+++.|+|+|+|.|..|.|.+|+
T Consensus 233 sW~~P~--~~~~p~~~~~L~Y~vryr~~~~~~~~~~~~---~~~t--s~~l---~~~~~Y~vqVRa~~~~~~G~WSe 299 (306)
T 3d85_D 233 SWEYPD--TWSTPHSYFSLTFCVQVQGKSKREKKDRVF---TDKT--SATV---ICRKNASISVRAQDRYYSSSWSE 299 (306)
T ss_dssp EEECCT--TSCSCTTTSCEEEEEEEECC------CEEE---ESSS--EEEE---CCCSSCEEEEEEEESSSCCCCCC
T ss_pred EEcCCC--CCcCCCceeeEEEEEEEEECCCCccEEEee---cccc--EEEE---eCCCeEEEEEEeccCCCCCCCCC
Confidence 999943 44433 379999999888666654322 1222 2334 45999999999999999999996
No 330
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.73 E-value=6.6e-17 Score=171.18 Aligned_cols=216 Identities=10% Similarity=0.064 Sum_probs=140.5
Q ss_pred eEEEeccCCCCCEEEEEEEE---cCCCceeeeEEEEE----cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEE
Q psy12060 741 LLEITNASFADAGEYECVVK---STVGKISTKTTVIV----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI 813 (978)
Q Consensus 741 ~l~i~~~~~~d~g~Y~c~a~---n~~G~~s~~~~l~v----~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v 813 (978)
...+..+.+.....++..|. +..|..+..+...+ ..||.+|.++.+.....+++.++|.+|.+.+ .+++|.|
T Consensus 54 ~~~~~~~~~~~~y~~~V~a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~~-~~~~Y~l 132 (314)
T 3bpo_C 54 TRRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTS-PDTNYTL 132 (314)
T ss_dssp SEEEEECCCSSCEEEEEEECC---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC----CCCCEEE
T ss_pred cEEEEEEcCCCcEEEEEEEEecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCCC-CCccEEE
Confidence 34555666677777777774 33444333333222 3467789999998888899999999988664 4789999
Q ss_pred EEeeccccCceEecccccceeeeecCCceeeEEeeccC----CCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCC
Q psy12060 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV----PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 889 (978)
Q Consensus 814 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~----p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P 889 (978)
+|+..+...|..+..... ........+.. +. .++.|.|+|.|.|..|.+..+.. .+.+...+.+.+|
T Consensus 133 ~y~~~~~~~~~~C~~~~~------~~~~~~c~~~~-~~~~~~~~~~y~~~V~a~n~~G~~~~~~~--~~~~~~~v~P~pP 203 (314)
T 3bpo_C 133 YYWHRSLEKIHQCENIFR------EGQYFGCSFDL-TKVKDSSFEQHSVQIMVKDNAGKIKPSFN--IVPLTSRVKPDPP 203 (314)
T ss_dssp EEEESSCSSCEECCCEEE------ETTEEEEEEEC-CC--------CCEEEEEEETTSCSCCEEE--EECSSSSEECCCC
T ss_pred EEEeCCCCccccCcCeec------CCCeEEEEECC-CCccccceeEEEEEEEEEcCCCceecccE--EEehhheEeeCCC
Confidence 998765555655532110 11234445555 54 37899999999999999876543 3444454555899
Q ss_pred CceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeee--------e-ccceeEEEEEcCCCCceeeE
Q psy12060 890 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK--------E-YGNVGIAVVRIPSEFYYTEY 960 (978)
Q Consensus 890 ~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~l~~L~p~t~Y 960 (978)
.++++. ...++|.|+|++|. ..++.+++|.|+|+..+...|....+. . ........+.|.+|.|++.|
T Consensus 204 ~~l~~~-~~~~~l~lsW~~P~--~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y 280 (314)
T 3bpo_C 204 HIKNLS-FHNDDLYVQWENPQ--NFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLN 280 (314)
T ss_dssp EEEEEE-EETTEEEEEEECCT--TCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCE
T ss_pred CEEEEE-EcCCcEEEEEeCCC--ccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEE
Confidence 999997 67789999999954 345557999999998887777643321 0 00123356789999999999
Q ss_pred EEEEEEecC
Q psy12060 961 EVKVQAIND 969 (978)
Q Consensus 961 ~~~V~A~n~ 969 (978)
.|+|+|.+.
T Consensus 281 ~~qVra~~~ 289 (314)
T 3bpo_C 281 TVRIRVKTN 289 (314)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEeeec
Confidence 999999995
No 331
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.73 E-value=1.4e-17 Score=170.36 Aligned_cols=178 Identities=16% Similarity=0.320 Sum_probs=116.0
Q ss_pred CCCCCCcEEEEEEEeecCCCe-----eEEEEcCccCCCC-----------------cee-----eecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYPVPS-----YNWTRRGSPLPRN-----------------AYF-----ENFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~-----v~W~~~~~~l~~~-----------------~~~-----~~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.|.|.+. |.|+|++...... ..+ ...+.+|.|.+++.+|
T Consensus 14 ~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D 93 (248)
T 3pv7_A 14 ITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEE 93 (248)
T ss_dssp EEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGG
T ss_pred EEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHH
Confidence 456899999999999988775 9999975443210 000 1123459999999999
Q ss_pred CeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeec-CCCC-eeEEeECCEECCCCCC------
Q psy12060 463 QGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELLNSETL------ 534 (978)
Q Consensus 463 ~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~~~~~~~~------ 534 (978)
+|.|+|.+.+..+.....+.|.|..+|.+...+. ..+..|+.++|.|.+.| .|.+ .|+|+|+|..+.....
T Consensus 94 ~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~ 172 (248)
T 3pv7_A 94 AGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVI 172 (248)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEE
T ss_pred CeEEEEEEEeCCccceeEEEEEEecCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCcccccccee
Confidence 9999999999988888889999999998876554 34557888999999998 7888 9999999865432100
Q ss_pred ---CCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCcc
Q psy12060 535 ---PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSF 589 (978)
Q Consensus 535 ---~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~ 589 (978)
..............|.|..... +|.|.|+|.|.|..+.......+.+....|.+
T Consensus 173 ~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~YtC~a~n~~~~~~~~~~v~l~V~~p~~ 229 (248)
T 3pv7_A 173 TGPTIKNMDGTFNVTSCLKLNSSQE-DPGTVYQCVVRHASLHTPLRSNFTLTAARHSL 229 (248)
T ss_dssp EEEEEECTTSCEEEEEEEECC--CC-CTTCEEEEEEECTTCSSCEEEEECC-------
T ss_pred ecccEECCCCCEEEEEEEEEcCccc-cCCCEEEEEEECCCCCCCcEEEEEEEEcCCCC
Confidence 0001111122234677777764 89999999999988875444433333234444
No 332
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.73 E-value=4.7e-17 Score=163.31 Aligned_cols=170 Identities=19% Similarity=0.240 Sum_probs=117.4
Q ss_pred CCCCCCcEEEEEEEeecCC-----CeeEEEEcCccC---------CCC------ceee-------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYPV-----PSYNWTRRGSPL---------PRN------AYFE-------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~-----~~v~W~~~~~~l---------~~~------~~~~-------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.|. +.|.|+|++..+ ... .+.. ..+.+|.|.+++.+|
T Consensus 12 ~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 91 (222)
T 3sbw_C 12 VVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQD 91 (222)
T ss_dssp EEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGG
T ss_pred EEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCccccc
Confidence 4568999999999987764 389999975322 100 1111 123489999999999
Q ss_pred CeEEEEEEEeCCCceEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCCeeEEeEC-CEECCCCCCC--CCCC
Q psy12060 463 QGEYICRASNDRSALESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRN-GELLNSETLP--LEDQ 539 (978)
Q Consensus 463 ~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~-g~~~~~~~~~--~~~~ 539 (978)
+|.|+|.|.+ .+.....+.|.|..+|..........+.+|+.++|.|.+.|.|.+.|.|+++ +..+...... ....
T Consensus 92 ~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~ 170 (222)
T 3sbw_C 92 AGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKRE 170 (222)
T ss_dssp CEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC--
T ss_pred CeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCC
Confidence 9999999999 6677778899998766533222222567899999999999999999999998 6655421100 0000
Q ss_pred CcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEE
Q psy12060 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584 (978)
Q Consensus 540 ~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 584 (978)
.........| .+.. .|.|.|+|.|.|..|.....+.+.|..
T Consensus 171 ~~~~~~~~~l---~v~~-~d~g~Y~C~a~n~~g~~~~~~~l~v~~ 211 (222)
T 3sbw_C 171 EKLFNVTSTL---RINT-TTNEIFYCTFRRLDPEENHTAELVIPE 211 (222)
T ss_dssp --CEEEEEEE---EEEC-CTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred CCCEEEEEEE---EEec-cCCcEEEEEEEeCccceeeEEEEEecC
Confidence 0101111122 3333 899999999999999988888887763
No 333
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.73 E-value=1.2e-16 Score=175.55 Aligned_cols=260 Identities=11% Similarity=0.067 Sum_probs=166.0
Q ss_pred eeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEe
Q psy12060 598 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677 (978)
Q Consensus 598 ~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 677 (978)
..+..|++++|.|.+. .+.|.|+++|..+... +. ....+.|+|.++...|+|.|.|.+.+ +.....+.+.+..
T Consensus 213 ~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~~-ri-~~~~~~L~I~nl~~sd~g~y~~~C~~--~~~i~~~~l~v~~ 285 (488)
T 2q7n_A 213 KVVLAGSNMTICCMSP---TKVLSGQIGNTLRPLI-HL-YGQTVAIHILNIPVSENSGTNIIFIT--DDDVYGTVVFAGY 285 (488)
T ss_dssp CEEESSCCCEEEECCS---SCEEEEEETTEECCCE-EC-SSSCEEEECCSCCCCCSSCEEEEEEE--SSCEEEEEEEEEC
T ss_pred CEEcCCCCEEEEEECC---CCEEEEEECCEECchh-hc-cceEEEEEEeCCCcccCCcEEEEEEc--CCeEEEEEEEeeC
Confidence 3478999999999988 4699999999887643 11 11223599999999999888887763 2223466777766
Q ss_pred CCceeeeCCCceEEE--ccccEEEEEEeeecC------CcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCC
Q psy12060 678 GPSYYEQLPPKITIA--AHRNLQLRCSAHTEE------LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 749 (978)
Q Consensus 678 ~p~~~~~~~~~~~~~--~g~~~~l~C~~~~~p------~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 749 (978)
+|.. |..+... ....+++.|...... ...+.+.+.+.+....-.. . .........+.+.....
T Consensus 286 pP~~----P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~---~--~~~~~~~~~ct~~l~~~ 356 (488)
T 2q7n_A 286 PPDV----PQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHR---I--EGLTNETYRLGVQMHPG 356 (488)
T ss_dssp CCCC----CCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEEC---S--SCCCSSCEEEEEECCSS
T ss_pred CCCC----CcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCcc---c--cccCCceEEEEEcCCCC
Confidence 6653 2333332 334566666554332 1123333333322110000 0 00001123455554433
Q ss_pred CCCEEEEEEEEcCCCceeeeEEEEE--cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEec
Q psy12060 750 ADAGEYECVVKSTVGKISTKTTVIV--EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 827 (978)
Q Consensus 750 ~d~g~Y~c~a~n~~G~~s~~~~l~v--~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~ 827 (978)
...+.+++.|.|..|...+...+.+ ..+|.||.++++...+.+++.|+|++|...++.++.|.|+|+..+...|....
T Consensus 357 ~t~Y~f~V~A~N~~G~~~S~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~~~ 436 (488)
T 2q7n_A 357 QEIHNFTLTGRNPLGQAQSAVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNA 436 (488)
T ss_dssp CCCCEEEEEEEETTEEEEEEEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEEEE
T ss_pred ccEEEEEEEEEeCCCCccceEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceEEE
Confidence 4667889999999998544222222 24799999999988899999999999876677899999999988766664211
Q ss_pred ccccceeeeecCCceee--EEeeccCCCceeEEEEEEecCCccC---CCCCCCCCCCCCCC
Q psy12060 828 EHVIGKEVDRYTGRKEA--SIENVLVPWSTYEFKVIAGNELGYG---EPSSPSPQYNTPAD 883 (978)
Q Consensus 828 ~~~~~~~~~~~~~~~~~--~~~~~L~p~~~Y~~~v~A~N~~G~g---~~s~~~~~~~t~~~ 883 (978)
.... .....+ ++.+ |.|++.|.|||+|.| .|.| +.|.+. .++|+++
T Consensus 437 ~~~~-------~~~~~~~v~l~~-L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v-~~~T~e~ 487 (488)
T 2q7n_A 437 TIRG-------AEDSTYHVAVDK-LNPYTAYTFRVRCSS-KTFWKWSRWSDEK-RHLTTEA 487 (488)
T ss_dssp EEEC-------CEEEEEEEEECS-CCSSCCBBCCEEEEE-SSCSSCCCCCCCC-CBCCCCC
T ss_pred EEec-------CCCcEEEEEeCC-CCCCceEEEEEEEEE-CCCCCCCCCcCCE-eEECCCC
Confidence 1000 012344 8899 999999999999999 8885 555554 6666553
No 334
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.73 E-value=1.7e-17 Score=167.86 Aligned_cols=163 Identities=16% Similarity=0.190 Sum_probs=117.6
Q ss_pred CCeeeecccCeEEEeCCCCCCC-CceEEEeccccccc---cc--------ccceEE----------EeeCCcEEEeeeee
Q psy12060 303 APEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFPNF---VE--------EDKRVF----------VSYDGALYFSALEQ 360 (978)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~~p-~~~i~W~~~~~~~~---~~--------~~~~~~----------~~~~~~L~i~~~~~ 360 (978)
....+.+|+.++|.|.+ .+.| .+.+.|+|++.... +. ...++. +..++.|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~ 86 (231)
T 2pet_A 8 PLVEVMRGKSVILDCTP-TGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQV 86 (231)
T ss_dssp SEEEEETTCCEEECCCC-BSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCG
T ss_pred CcEEEEcCCCEEEeccc-CCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCc
Confidence 34567889999999998 4556 48999998765421 00 123444 56667899999999
Q ss_pred ecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcE-EEEEEE-eecCCCeeEEEEcCc
Q psy12060 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKV-RLECVA-FGYPVPSYNWTRRGS 438 (978)
Q Consensus 361 ~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~-~l~C~~-~g~p~~~v~W~~~~~ 438 (978)
+|+|.|+|.+.+... +.....+.|.|..+|..+.+...+. ...+.+|+.+ +|.|.+ .|.|.|.|+|+|++.
T Consensus 87 ~D~G~Y~C~~~~~~~--~~~~~~~~l~V~~~p~~~~~~~~~~-----~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~ 159 (231)
T 2pet_A 87 GDERDYVCVVRAGAA--GTAEATARLNVFAKPEATEVSPNKG-----TLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQ 159 (231)
T ss_dssp GGCEEEEEEEECGGG--CEEEEEEEEEEEBCCCCCEEEECCS-----SCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTE
T ss_pred ccCceEEEEEEecCC--CceEEEEEEEEEecCCCcEEecCCc-----ceeecCCCceEEEEEEeECcccCCEEEEEECCc
Confidence 999999999998762 2233447888887765444333221 2346689988 999999 799999999999999
Q ss_pred cCCCCc----eeeec-------------ccEEEeCCCCCCCCeEEEEEEEeC
Q psy12060 439 PLPRNA----YFENF-------------NRILTIPNVKVEDQGEYICRASND 473 (978)
Q Consensus 439 ~l~~~~----~~~~~-------------~~~L~i~~~~~~d~G~Y~C~a~n~ 473 (978)
.+.... ..... .+.|.|.....+|+|.|+|.|.|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 160 RLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp ECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred cCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 987654 11110 156888766666799999999994
No 335
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.73 E-value=2.1e-17 Score=162.41 Aligned_cols=159 Identities=16% Similarity=0.127 Sum_probs=110.3
Q ss_pred eeeecccCeEEEeCCCCCCCCceEEEeccccccccccc-ceEE-EeeCCcEEEeeeeeecceeeEEEEEeeccc--cccc
Q psy12060 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEED-KRVF-VSYDGALYFSALEQIDAGNYSCNVQSKVSD--TGRN 380 (978)
Q Consensus 305 ~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~-~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~--~~~~ 380 (978)
..+.+|+.++|.|.+. .|.+.|.|+|+|..+..... .+.. ...++.|.|.+++.+|+|.|+|.+.+.... ....
T Consensus 17 ~~v~~G~~v~L~C~~~--~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~ 94 (201)
T 1nkr_A 17 PLVKSEETVILQCWSD--VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAP 94 (201)
T ss_dssp SEEETTCCEEEEEEES--SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCC
T ss_pred CccCCCCcEEEEEecc--CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCC
Confidence 5677899999999984 36789999999876432110 0001 123467999999999999999999875321 1223
Q ss_pred CCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCce---ee--ecccEEEe
Q psy12060 381 GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAY---FE--NFNRILTI 455 (978)
Q Consensus 381 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~---~~--~~~~~L~i 455 (978)
+..+.|.|...+..+.+...+. ..+.+|++++|.|.+.+ +.+.|.|+|+|..+..... .. .....|.|
T Consensus 95 s~~~~l~V~~~~~~p~i~~~p~------~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i 167 (201)
T 1nkr_A 95 SDPLDIVIIGLYEKPSLSAQPG------PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPL 167 (201)
T ss_dssp CCCEEEEEECSSCCCEEEEESC------SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEE
T ss_pred CCCEEEEeeccCCCCceecCCC------CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEe
Confidence 4457788875432222222111 25679999999999886 5679999999988754321 11 12568999
Q ss_pred CCCCCCCCeEEEEEEEeCC
Q psy12060 456 PNVKVEDQGEYICRASNDR 474 (978)
Q Consensus 456 ~~~~~~d~G~Y~C~a~n~~ 474 (978)
.+++ |+|.|+|.|.+..
T Consensus 168 ~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 168 GPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EECC--SCEEEEEEEEETT
T ss_pred CCcC--CCeeEEEEEEcCC
Confidence 9998 9999999999753
No 336
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.72 E-value=2.5e-17 Score=163.98 Aligned_cols=158 Identities=18% Similarity=0.344 Sum_probs=114.6
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcC--ccCC------------CCceee----ecccEEEeCCCCCCCCeEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRG--SPLP------------RNAYFE----NFNRILTIPNVKVEDQGEYICRAS 471 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~l~------------~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~ 471 (978)
.+.+|++++|.|.+.+.|.+.|.|+|++ ..+. ...++. ....+|.|.+++.+|+|.|+|.|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (213)
T 3nl4_L 12 SEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQST 91 (213)
T ss_dssp EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEecC
Confidence 5679999999999999999999999953 1110 011111 123479999999999999999999
Q ss_pred eCCCc---eEEEEEEEE---EeeceeeccCCcccccCCCceeEEEEeec-CCCCeeEEeECCEECCCCC----CCCCCCC
Q psy12060 472 NDRSA---LESSVTISI---QAEPNFTIPLTDKHMDNQADLTWTCEAFG-VPDVTYSWFRNGELLNSET----LPLEDQD 540 (978)
Q Consensus 472 n~~g~---~~~~~~l~V---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~g~~~~~~~----~~~~~~~ 540 (978)
|..+. ....+.|.| ..+|.+...+....+.+|+.++|.|.+.+ .|.+.|.|+|+|..+.... .......
T Consensus 92 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~ 171 (213)
T 3nl4_L 92 YENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSAD 171 (213)
T ss_dssp CSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTT
T ss_pred CCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCC
Confidence 97763 334456666 34566666555556778999999999998 8999999999999886421 0011112
Q ss_pred cEEEecCEEEEEeCCCCCCCeEEEEEEE
Q psy12060 541 RYFIQDNVLTIRYLNPERDPAMYQCRAK 568 (978)
Q Consensus 541 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~ 568 (978)
......+.|.|..+.. +|+|.|+|.|.
T Consensus 172 ~~~~~~s~L~i~~~~~-~d~g~Y~C~a~ 198 (213)
T 3nl4_L 172 CTYNLSSTLTLTSTEY-NSHKEYTCKVT 198 (213)
T ss_dssp CCEEEEEEEEEEHHHH-HTCCEEEEEEE
T ss_pred CeEEEEEEEEecHHHc-CCCCeEEEEEE
Confidence 2223346799999886 89999999999
No 337
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.72 E-value=5.3e-17 Score=161.84 Aligned_cols=173 Identities=17% Similarity=0.215 Sum_probs=119.9
Q ss_pred CCeeeecccCeEEEeCCCCC------CCCceEEEecccccc-----c----------ccccceEEEee-----CCcEEEe
Q psy12060 303 APEIGNQNWGKAMFCDPPTN------YPGVNYYWARDYFPN-----F----------VEEDKRVFVSY-----DGALYFS 356 (978)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~------~p~~~i~W~~~~~~~-----~----------~~~~~~~~~~~-----~~~L~i~ 356 (978)
....+.+|+.++|.|.+... .+.+.+.|+|++... . .....|+.+.. +.+|.|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~ 87 (214)
T 2zg1_A 8 KSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIG 87 (214)
T ss_dssp SEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEEC
T ss_pred cEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEc
Confidence 34567789999999987432 257889999986421 1 11224555543 2479999
Q ss_pred eeeeecceeeEEEEEeecccc-cccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEee----cCCCee
Q psy12060 357 ALEQIDAGNYSCNVQSKVSDT-GRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG----YPVPSY 431 (978)
Q Consensus 357 ~~~~~d~G~Y~C~~~n~~~~~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g----~p~~~v 431 (978)
+++.+|+|.|+|.+.+..+.. ......+.|.|...+..+.+..+ ..+.+|+.++|.|.+.+ .|.|.|
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~--------~~~~~G~~v~L~C~~~~~~~~~p~p~v 159 (214)
T 2zg1_A 88 DARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFL--------EPLESGRPTRLSCSLPGSCEAGPPLTF 159 (214)
T ss_dssp SCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC----------CCCCTTCCEEEEEECTTCCSCSSCCEE
T ss_pred cCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecC--------ccccCCCeEEEEEEeccCCCCCCCceE
Confidence 999999999999999865221 11234578888876543333321 23578999999999976 388999
Q ss_pred EEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCc--eEEEEEEEE
Q psy12060 432 NWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSA--LESSVTISI 485 (978)
Q Consensus 432 ~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V 485 (978)
+|+|++..+.... ....+.|.|..+..+|+|.|+|.|.|..+. .+..+.|.|
T Consensus 160 ~W~~~~~~~~~~~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 160 SWTGNALSPLDPE--TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp EEESSTTSSSCSS--CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred EEeCCCCccCCCC--ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 9999987654322 134678999999999999999999997644 455555543
No 338
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=8.3e-18 Score=150.33 Aligned_cols=114 Identities=24% Similarity=0.220 Sum_probs=96.7
Q ss_pred EEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeee
Q psy12060 859 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 938 (978)
Q Consensus 859 ~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~ 938 (978)
+|+|.|..|.|++|... .++|.+++|..+|.++++...+.++|.|+|++|+....||.|++|+|+|+..+...|...
T Consensus 3 ~V~A~n~~G~g~~s~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-- 79 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDI-TVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET-- 79 (124)
T ss_dssp SCCCCCCCCCCCCCCCC-CCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE--
T ss_pred eEEEEeCCccCCCCCCE-EEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE--
Confidence 58899999999988876 788999999889999999999999999999996655589999999999999876665432
Q ss_pred eeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 939 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 939 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
...+. ..+.|.+|.|++.|.|+|+|+|.+|.||+|++
T Consensus 80 -~~~~~--~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 116 (124)
T 2ed9_A 80 -LEPNN--LWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNW 116 (124)
T ss_dssp -ECSSC--SEEEEECCCSSCEEEECEEEECSSCBCCCCCC
T ss_pred -ecCCc--CEEEEcCCCCCCEEEEEEEEEcCCccCCCCCC
Confidence 11222 34678999999999999999999999999974
No 339
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.72 E-value=5.9e-18 Score=166.14 Aligned_cols=145 Identities=14% Similarity=0.297 Sum_probs=106.1
Q ss_pred CCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEEEe---
Q psy12060 411 PKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISIQA--- 487 (978)
Q Consensus 411 v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~--- 487 (978)
+.+|++++|.|.+ |.+.|+|+|+|..+... ...+++|.|.+++.+|+|.|+|.+.+.. + ..+.|.|..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~---~~~~~~L~i~~v~~~DsG~Y~C~~~~~~-s--~~~~v~v~~~~~ 85 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL---TEDKKKWNLGSNAKDPRGMYQCKGSQNK-S--KPLQVYYRMGSA 85 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE---ESSCCCEEEEEGGGCCEEEEEEESSSSC-C--CCEEEEEEC---
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC---CCCCCeEEeCCCCcCCCEEEEEEecCCC-C--eeEEEEEEEecc
Confidence 4589999999988 78899999999887532 1235689999999999999999975532 2 224444430
Q ss_pred ----------------------------eceeeccCCccccc-CCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCC
Q psy12060 488 ----------------------------EPNFTIPLTDKHMD-NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED 538 (978)
Q Consensus 488 ----------------------------~p~~~~~~~~~~~~-~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~ 538 (978)
++.+...+ ..+. +|++++|.|. +.|.+.|.|+|+|..+.... .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~----~ 157 (204)
T 1sy6_A 86 DDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP--YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDE----D 157 (204)
T ss_dssp ---------------------------------CCC--CEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCT----T
T ss_pred ccccccccccccccccccccccccccccccceecCC--ceeeecCCcEEEEcC--CCCCCceEEEECCEECCCcc----C
Confidence 11121111 2344 8999999998 77889999999999886321 1
Q ss_pred CCcEEEecCEEEEEeC-CCCCCCeEEEEEEEcCCCc
Q psy12060 539 QDRYFIQDNVLTIRYL-NPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 539 ~~~~~~~~~~l~i~~~-~~~~d~G~Y~C~a~n~~g~ 573 (978)
........+.|.|.++ .. +|+|.|+|.|.|..|.
T Consensus 158 ~~~~~~~~~~L~I~~v~~~-~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 158 DKNIGSDEDHLSLKEFSEL-EQSGYYVCYPRGSKPE 192 (204)
T ss_dssp CTTEEEETTEEEETTCCHH-HHCEEEEEEETTSCGG
T ss_pred CceEecCCCEEEEeeCCcc-ccCEEEEEEeccCCCC
Confidence 2233345789999999 86 8999999999999985
No 340
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.72 E-value=2.5e-17 Score=172.49 Aligned_cols=204 Identities=16% Similarity=0.130 Sum_probs=134.6
Q ss_pred CCCCCEEEEEEEEcCCCceeeeEEEEE----cCCCCCCCceEEEEeeCCeeEEEeecCCCC------CCCceeEEEEEee
Q psy12060 748 SFADAGEYECVVKSTVGKISTKTTVIV----EGPPGLPGGVQVVEVHKTSATIQWTDGATN------GRPITHYKIIART 817 (978)
Q Consensus 748 ~~~d~g~Y~c~a~n~~G~~s~~~~l~v----~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~------~~~i~~Y~v~~~~ 817 (978)
.......++.+|.| .|....+....+ ..+++||. +.+.. ...++.|+|.||... .+.+.+|.|.|+.
T Consensus 69 ~~~~~Y~~rV~A~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~-~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~ 145 (306)
T 3s98_A 69 NVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEA-EDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWK 145 (306)
T ss_dssp CTTSCEEEEEEEEC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEE-CSSCEEEEEECC---CCCC-----CCEEEEEEEE
T ss_pred CCCCcEEEEEEEEe-CCcCCCEeeeeEechhhCccCCCe-EEEEE-cCCEEEEEEECCCCCCcceeccCCcEEEEEEEEE
Confidence 34455666777888 553322212222 24577775 77654 446899999976543 3578999999987
Q ss_pred ccccC-ceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEec--CCccCCCCCCCCCCCCCCCCCCCCCCceee
Q psy12060 818 NWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN--ELGYGEPSSPSPQYNTPADKPYQAPSRIGG 894 (978)
Q Consensus 818 ~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N--~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~ 894 (978)
.+... |... .....++|.+ |.|++.|.|+|+|.| ..|.|++|... .++|.++.|..+|.++.+
T Consensus 146 ~~~~~~~~~~------------~~~~~~~l~~-L~p~t~Y~~~V~A~~~~~~g~g~~S~~~-~~~T~~~~p~~~P~~v~~ 211 (306)
T 3s98_A 146 NSSGVEERIE------------NIYSRHKIYK-LSPETTYCLKVKAALLTSWKIGVYSPVH-CIKTTVENELPPPENIEV 211 (306)
T ss_dssp TTTCCCEEEE------------EECTEEEECS-CCTTCEEEEEEEEEEGGGTEECCCCCCE-EEECCSCCSSCCCEEEEE
T ss_pred CCCCCeEEEe------------cccceEEEcc-CCCCCeEEEEEEEEEccCCCCCCCCCcE-eeEecCCCcCCCCceEEE
Confidence 65533 3211 1235688999 999999999999999 78999999886 778888888899999999
Q ss_pred cccccCcEEEEEEeCCCCCCCCCcceEEEEEE--------ecCCccceeeeeeeccceeEEEEEcCC-CCceeeEEEEEE
Q psy12060 895 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWR--------KKNDTEFQSETLKEYGNVGIAVVRIPS-EFYYTEYEVKVQ 965 (978)
Q Consensus 895 ~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~-L~p~t~Y~~~V~ 965 (978)
...+ +++.|+|++|. .+ .+|.+.|. ..+..+|...........+. +.+.+ |.+...|.|||+
T Consensus 212 ~~~~-~s~~l~W~~p~---~~---~~~~v~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~--c~~~~~~~~~~~Y~~RV~ 282 (306)
T 3s98_A 212 SVQN-QNYVLKWDYTY---AN---MTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQ--CVFPQNVFQKGIYLLRVQ 282 (306)
T ss_dssp EEET-TEEEEEEECSS---SS---CEEEEEEEEGGGGSCC----CCCEECGGGTTBSSSE--EEEEGGGSCSSEEEEEEE
T ss_pred EEec-CEEEEEeCCCC---Cc---EEEEEEEehhhhhccccccccCceECCCceeCCCcc--ccCchhhcccCCEEEEEE
Confidence 7654 67999999842 22 25555554 33456787431111112222 34454 345559999999
Q ss_pred EecCCCCCCCCC
Q psy12060 966 AINDVGPGPESE 977 (978)
Q Consensus 966 A~n~~G~gp~S~ 977 (978)
|.|..|.|++|+
T Consensus 283 A~n~~~~s~~s~ 294 (306)
T 3s98_A 283 ASDGNNTSFWSE 294 (306)
T ss_dssp EECSSCBCCCCC
T ss_pred EccCCCcccccc
Confidence 999999999996
No 341
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.72 E-value=1.1e-17 Score=201.93 Aligned_cols=146 Identities=14% Similarity=0.223 Sum_probs=114.4
Q ss_pred CCCCceEEEEeeCCeeEEEeecCCC-CCCCceeEEEEEeec--------------cccCceEecccccceee-eecCCce
Q psy12060 779 GLPGGVQVVEVHKTSATIQWTDGAT-NGRPITHYKIIARTN--------------WNSTWFNVSEHVIGKEV-DRYTGRK 842 (978)
Q Consensus 779 ~~P~~~~~~~~~~~~v~l~W~~p~~-~~~~i~~Y~v~~~~~--------------~~~~w~~~~~~~~~~~~-~~~~~~~ 842 (978)
..|.++++..++++++.|+|++|.. ++++|.+|.|+|+.. +...|............ .......
T Consensus 470 ~~~~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~ 549 (897)
T 2dtg_E 470 NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP 549 (897)
T ss_dssp CCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred cceeEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCcccccccccccc
Confidence 3467889999999999999999874 556999999999875 23467544322110000 0000246
Q ss_pred eeEEeeccCCCceeEEEEEE-ecCCcc----CCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCC
Q psy12060 843 EASIENVLVPWSTYEFKVIA-GNELGY----GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 917 (978)
Q Consensus 843 ~~~~~~~L~p~~~Y~~~v~A-~N~~G~----g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~ 917 (978)
.+++.+ |+|++.|.|+|+| .|..|. |+.|... .++|.+++| ++|.++.+...++++|.|+|+| |...||.
T Consensus 550 ~~~l~~-L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v-~~~T~~~~P-s~P~~l~~~~~s~tsI~LsW~p--P~~~nG~ 624 (897)
T 2dtg_E 550 GWLMRG-LKPWTQYAIFVKTLVTFSDERRTYGAKSDII-YVQTDATNP-SVPLDPISVSNSSSQIILKWKP--PSDPNGN 624 (897)
T ss_dssp EEEECS-CCSSCBCCBEEEECCCCCSSCCCCCCBCCCB-CCBCCCCCC-CCCEEEEEEECSSSCEEEEEEC--CCCSSSS
T ss_pred ceEeCC-CCCCcEEEEEEEEEEeccCCccccCCccceE-EEECCCCCC-cCCcceEEEeCCCCEEEEEEeC--CCCCCCC
Confidence 788999 9999999999999 999998 6777766 788888888 6999999999999999999998 5788999
Q ss_pred cceEEEEEEecC
Q psy12060 918 NIYYKIFWRKKN 929 (978)
Q Consensus 918 i~~Y~i~~~~~~ 929 (978)
|++|+|+|+..+
T Consensus 625 I~~Y~V~~~~~~ 636 (897)
T 2dtg_E 625 ITHYLVFWERQA 636 (897)
T ss_dssp CSEEECCEEEEC
T ss_pred eeEEEEEEEECC
Confidence 999999998754
No 342
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.72 E-value=2.1e-16 Score=153.73 Aligned_cols=160 Identities=16% Similarity=0.218 Sum_probs=115.7
Q ss_pred cceeecCCCeEEEEEeecc-CCCCeeEEeeCCEEec---CC---------------CcEEEeecCcEEEccccCCCCEEE
Q psy12060 596 SETYAGEGGNVTIFCNPEA-APKPKFVWKKDGNIIG---SG---------------GRRKIFENGNLLISPVSRDDSGIY 656 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~-~p~~~i~W~~~g~~~~---~~---------------~~~~~~~~~~l~i~~~~~~d~G~Y 656 (978)
..+.+.+|++++|.|.+.+ .+.+.|.|+++|..+. .+ .|..+..+++|.|.+++.+|+|.|
T Consensus 6 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y 85 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSY 85 (193)
T ss_dssp EEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEE
T ss_pred eEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceE
Confidence 4456889999999999876 4456999999986542 10 244555567899999999999999
Q ss_pred EEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccc-cEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCee
Q psy12060 657 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR-NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735 (978)
Q Consensus 657 ~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~-~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~ 735 (978)
+|.|.|..+.....+.|.|..+|..+...........|. .++|.|.+.+.++ ...+.|+++|..+..
T Consensus 86 ~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p-~p~i~W~~~g~~l~~----------- 153 (193)
T 2if7_A 86 RAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADD-NVSFRWEALGNTLSS----------- 153 (193)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCT-TCEEEEEETTEEEES-----------
T ss_pred EEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCC-ceEEEEEeCCEEcCC-----------
Confidence 999999988877778888876554322111111223454 8999999998542 346799999876532
Q ss_pred ecCCceEEEeccCCC-CCEEEEEEEEcCCCceeeeE
Q psy12060 736 NIDGGLLEITNASFA-DAGEYECVVKSTVGKISTKT 770 (978)
Q Consensus 736 ~~~~~~l~i~~~~~~-d~g~Y~c~a~n~~G~~s~~~ 770 (978)
+..|.|...... |+|.|+|.|.|.+|..+..+
T Consensus 154 ---~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 154 ---QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp ---SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred ---CCeEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 346777654454 89999999999999876554
No 343
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.72 E-value=2.6e-17 Score=162.06 Aligned_cols=170 Identities=14% Similarity=0.218 Sum_probs=117.0
Q ss_pred eeeecccCeEEEeCCCC---CCCCceEEEeccccccccc----------ccceEEE--eeCCcEEEeeeeeecceeeEEE
Q psy12060 305 EIGNQNWGKAMFCDPPT---NYPGVNYYWARDYFPNFVE----------EDKRVFV--SYDGALYFSALEQIDAGNYSCN 369 (978)
Q Consensus 305 ~~~~~~~~~~l~C~~~~---~~p~~~i~W~~~~~~~~~~----------~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~ 369 (978)
..+.+|+.++|.|.+.. +.|.+.+.|+|++..+... ...+..+ ..+++|.|.+++.+|+|.|+|.
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECV 83 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEE
Confidence 45678999999999853 3466899999998764211 1123322 2346899999999999999999
Q ss_pred EEeeccccccc--CCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEe-ecCCCeeEEEEcCccCCCCcee
Q psy12060 370 VQSKVSDTGRN--GPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAF-GYPVPSYNWTRRGSPLPRNAYF 446 (978)
Q Consensus 370 ~~n~~~~~~~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~-g~p~~~v~W~~~~~~l~~~~~~ 446 (978)
|.|..+..... ...+.|.|..++..+.+.. .....|+.++|.|.+. |.|.|.|+|+++|..+......
T Consensus 84 ~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~---------~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~ 154 (201)
T 1dr9_A 84 VLKYEKDAFKREHLAEVTLSVKADFPTPSISD---------FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTT 154 (201)
T ss_dssp EEECCTTSCEEEEEEEEEEEEECCCCCCEEEE---------EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEE
T ss_pred EEcCCCCccccccccEEEEEEcCCCCCCceEe---------ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccce
Confidence 99976543221 2346777776543222211 1123699999999995 9999999999999988754321
Q ss_pred -e-ecc-cEE---EeCCCCCCCCeEEEEEEEeCCCceEEEEEE
Q psy12060 447 -E-NFN-RIL---TIPNVKVEDQGEYICRASNDRSALESSVTI 483 (978)
Q Consensus 447 -~-~~~-~~L---~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 483 (978)
. ... +.+ .+..+..+|.|.|+|.|.|..|..+..+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 155 VSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred EEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 1 111 221 223455689999999999999988776654
No 344
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.71 E-value=5.1e-17 Score=160.03 Aligned_cols=158 Identities=18% Similarity=0.271 Sum_probs=111.8
Q ss_pred CCCCCCcEEEEEEEe----ecCCCeeEEEEcCccCCC--------------Ccee-eecccEEEeCCCCCCCCeEEEEEE
Q psy12060 410 APKAGDKVRLECVAF----GYPVPSYNWTRRGSPLPR--------------NAYF-ENFNRILTIPNVKVEDQGEYICRA 470 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~----g~p~~~v~W~~~~~~l~~--------------~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a 470 (978)
.+.+|++++|.|.+. +.|.+.+.|++++..+.. ...+ ...+.+|.|.+++.+|+|.|+|.|
T Consensus 5 ~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 84 (201)
T 1dr9_A 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVV 84 (201)
T ss_dssp EEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEEE
T ss_pred EEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEEE
Confidence 456899999999985 457789999999887620 0011 123568999999999999999999
Q ss_pred EeCCCce-----EEEEEEEEEee---ceeeccCCcccccCCCceeEEEEee-cCCCCeeEEeECCEECCCCCCCCCCCCc
Q psy12060 471 SNDRSAL-----ESSVTISIQAE---PNFTIPLTDKHMDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLEDQDR 541 (978)
Q Consensus 471 ~n~~g~~-----~~~~~l~V~~~---p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~~~ 541 (978)
.|..|.. ...+.|.|..+ |.+... ....|+.++|.|.+. |.|.|.|+|+|+|..+... ..+
T Consensus 85 ~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~------~~~ 154 (201)
T 1dr9_A 85 LKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAI------NTT 154 (201)
T ss_dssp EECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCS------EEE
T ss_pred EcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECccc------cce
Confidence 9977653 35677777765 333321 124588999999995 8899999999999888632 111
Q ss_pred EEEe-c-CEE---EEEeCCCCCCCeEEEEEEEcCCCceeeEE
Q psy12060 542 YFIQ-D-NVL---TIRYLNPERDPAMYQCRAKNQLKTRYSSA 578 (978)
Q Consensus 542 ~~~~-~-~~l---~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~ 578 (978)
.... . +.+ .+..+.. .|.|.|+|.|.|..+......
T Consensus 155 ~~~~~~~~~~~~~~~~~v~~-~d~g~Y~C~a~n~~~~~s~~~ 195 (201)
T 1dr9_A 155 VSQDPETELYAVSSKLDFNM-TTNHSFMCLIKYGHLRVNQTF 195 (201)
T ss_dssp EEECTTTCCEEEEEEEEEET-TSCEEEEEEEEETTCCEEEEE
T ss_pred EEecCCCcEEEEEEEEEEEe-cCCCEEEEEEecCcceeeeEE
Confidence 1111 1 111 1233444 799999999999988765544
No 345
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.71 E-value=1.1e-16 Score=176.46 Aligned_cols=206 Identities=16% Similarity=0.128 Sum_probs=141.1
Q ss_pred ccCCCCCEEEEEEEEcCCCceeeeEE-EEE----cCCCCCCCceEEEEeeCCeeEEEeecCC-CCC------CCceeEEE
Q psy12060 746 NASFADAGEYECVVKSTVGKISTKTT-VIV----EGPPGLPGGVQVVEVHKTSATIQWTDGA-TNG------RPITHYKI 813 (978)
Q Consensus 746 ~~~~~d~g~Y~c~a~n~~G~~s~~~~-l~v----~~~P~~P~~~~~~~~~~~~v~l~W~~p~-~~~------~~i~~Y~v 813 (978)
++.......++..|.| |..+.... ..+ ..+++||. +.+. ...+++.|+|. |. ..| +.+.+|.|
T Consensus 71 ~l~~~~~Y~~rV~A~n--~~~S~~s~~~~~~~~~~~~~~pP~-v~~~-~~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v 145 (414)
T 3se4_A 71 KLNVYEEIKLRIRAEK--ENTSSWYEVDSFTPFRKAQIGPPE-VHLE-AEDKAIVIHIS-PGTKDSVMWALDGLSFTYSL 145 (414)
T ss_dssp CCCTTSCEEEEEEEEE--TTEEEEEECCCBCHHHHCCCCCCE-EEEE-ECSSCEEEEEE-CSSSSCTTTGGGGSSCEEEE
T ss_pred cccCCCcEEEEEEEee--CCcCCCEecCceeecccceeCCCe-EEEE-EcCCEEEEEEE-cCCCCCceeeeecCcEEEEE
Confidence 3445555666777888 43332211 111 23456664 7664 44579999999 65 322 36789999
Q ss_pred EEeeccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecC--CccCCCCCCCCCCCCCCCCCCCCCCc
Q psy12060 814 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE--LGYGEPSSPSPQYNTPADKPYQAPSR 891 (978)
Q Consensus 814 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~--~G~g~~s~~~~~~~t~~~~P~~~P~~ 891 (978)
.|+..+...+.... .....++|.+ |.|++.|.|+|+|.|. .|.|+.|.+. .+.|.++.|..+|.+
T Consensus 146 ~y~~~~~~~~~~~~-----------~~~~~~~i~~-L~p~t~Y~~~V~A~n~~~~g~g~~S~~~-~~~t~~~~~~~~P~~ 212 (414)
T 3se4_A 146 VIWKNSSGVEERIE-----------NIYSRHKIYK-LSPETTYCLKVKAALLTSWKIGVYSPVH-CIKTTVENELPPPEN 212 (414)
T ss_dssp EEEETTTCCEEEEE-----------EECSEEEECC-CCTTCEEEEEEEEECTTTCCEEEECCCE-EEECCSCCSSCCCEE
T ss_pred EEEECCCCceEEEe-----------cCCcEEEEcC-CCCCCeEEEEEEEEeccCCCCCccCccc-ccccccccccCCCCc
Confidence 99887665432211 1245688999 9999999999999994 7888888765 677877888889999
Q ss_pred eeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEec--------CCccceeeeeeeccceeEEEEEcCCCCceeeEEEE
Q psy12060 892 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK--------NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 963 (978)
Q Consensus 892 ~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 963 (978)
+.+...+ +++.|+|++|+ .+.+|+|+|+.. +...|...........+...+. .+|.+++.|.|+
T Consensus 213 v~~~~~~-~~~~l~W~pp~------~~~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t-~~l~~~~~Y~~r 284 (414)
T 3se4_A 213 IEVSVQN-QNYVLKWDYTY------ANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFP-QNVFQKGIYLLR 284 (414)
T ss_dssp EEEEEET-TEEEEEEECSS------SSCEEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEE-GGGSCSSEEEEE
T ss_pred cEEEEec-CCeEEEECCCC------CCeEEEEEEEehhccccccccccCceECCCccCCCCCEEcCC-cccccCccEEEE
Confidence 9987765 57999999942 235999999974 2455654321111122223332 269999999999
Q ss_pred EEEecCCCCCCCCC
Q psy12060 964 VQAINDVGPGPESE 977 (978)
Q Consensus 964 V~A~n~~G~gp~S~ 977 (978)
|+|+|..|.||+|+
T Consensus 285 V~A~n~~g~s~~s~ 298 (414)
T 3se4_A 285 VQASDGNNTSFWSE 298 (414)
T ss_dssp EEEECSSSEEEECC
T ss_pred EEEecCCCcccccc
Confidence 99999999999985
No 346
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.71 E-value=2.2e-16 Score=158.44 Aligned_cols=181 Identities=13% Similarity=0.198 Sum_probs=122.9
Q ss_pred cCCcccccCCCceeEEEEeecCC-----CCeeEEeECCEECC---------CCCCCCCCCCcEEEec-------CEEEEE
Q psy12060 494 PLTDKHMDNQADLTWTCEAFGVP-----DVTYSWFRNGELLN---------SETLPLEDQDRYFIQD-------NVLTIR 552 (978)
Q Consensus 494 ~~~~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~g~~~~---------~~~~~~~~~~~~~~~~-------~~l~i~ 552 (978)
++....+.+|++++|.|.+.+.| .+.+.|+|++..+. .... .....+..+.. ..|.|.
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~-~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQH-SSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSC-GGGSSSEEECHHHHTTTEEEEEES
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCcccccccc-ccccCceEEccccccCCEEEEEEc
Confidence 44556788999999999987766 34899999764331 1100 11123444322 379999
Q ss_pred eCCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeC-CEEecC
Q psy12060 553 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD-GNIIGS 631 (978)
Q Consensus 553 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~-g~~~~~ 631 (978)
++.. +|+|.|+|.+.| .+.......|.|.. +|..... .....+..|+.++|.|.+.|.|.|.++|+++ |..+..
T Consensus 86 ~v~~-~D~G~Y~C~~~~-~~~~~~~~~l~V~~-~~~~~~~--~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~ 160 (222)
T 3sbw_C 86 DVKL-QDAGVYRCMISY-GGADYKRITVKVNA-PYNKINQ--RILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSG 160 (222)
T ss_dssp SCCG-GGCEEEEEEEES-SSEEEEEEEEEEEB-CCCCCEE--EEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECC
T ss_pred Cccc-ccCeEEEEEEEe-CCCceeEEEEEEEC-CCCCCCc--eeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecC
Confidence 9996 999999999999 56666667777763 2322111 1112467899999999999999999999998 666554
Q ss_pred CCcEEEe--ecCcEEE---ccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCCc
Q psy12060 632 GGRRKIF--ENGNLLI---SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 680 (978)
Q Consensus 632 ~~~~~~~--~~~~l~i---~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~ 680 (978)
....... .++.+.+ ..+..+|.|.|+|.|.|..|.....+.|.|..+|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 161 KTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp EEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred ccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 3322221 2233332 24567899999999999999999999988876553
No 347
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.70 E-value=8.4e-17 Score=160.17 Aligned_cols=172 Identities=18% Similarity=0.201 Sum_probs=122.0
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEeeC--CEEec------------CCCcEEEee---cCcEEEccccCCCCEEEEEE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIG------------SGGRRKIFE---NGNLLISPVSRDDSGIYSCT 659 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--g~~~~------------~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~ 659 (978)
.+.+.+|++++|.|.+.+.|.+.+.|+|. +.... ...++.+.. +.+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 45688999999999999999999999982 22110 223444322 23599999999999999999
Q ss_pred EEeCCc---eeeeeEEEEEE----eCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccc--
Q psy12060 660 ATNVHG---MDESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-- 730 (978)
Q Consensus 660 a~n~~g---~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~-- 730 (978)
|.|..| .......|.|. .+|.+... +....+..|+.++|.|.+.+.+++.+.+.|+++|..+........
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~ 167 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLF-PPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPS 167 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCCBCCEEEEE-CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCE
T ss_pred eccCCcceeEEcCceEEEEeCCCCCCCeEEcc-CCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcC
Confidence 999887 44556788887 34443332 222333379999999999997666568899999998864210000
Q ss_pred -cCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeE
Q psy12060 731 -ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770 (978)
Q Consensus 731 -~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~ 770 (978)
....+. ..+.|.|..+..+|+|.|+|.|.|..|....++
T Consensus 168 ~~~~~~~-~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 168 KSDSKYM-ATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EETTEEE-EEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred ccCCcEE-EEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 001111 124688999999999999999999998766554
No 348
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.70 E-value=4.6e-17 Score=162.78 Aligned_cols=164 Identities=18% Similarity=0.354 Sum_probs=113.5
Q ss_pred CCCCCCcEEEEEEEeec-CCCeeEEEEcCc--cC------CC----------Ccee----eecccEEEeCCCCCCCCeEE
Q psy12060 410 APKAGDKVRLECVAFGY-PVPSYNWTRRGS--PL------PR----------NAYF----ENFNRILTIPNVKVEDQGEY 466 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~-p~~~v~W~~~~~--~l------~~----------~~~~----~~~~~~L~i~~~~~~d~G~Y 466 (978)
.+.+|++++|.|.+.+. |.+.|.|+|.+. .. .. ..++ .....+|.|.+++.+|+|.|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 90 (218)
T 3s96_B 11 SFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEAIY 90 (218)
T ss_dssp EEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCEEE
Confidence 56799999999999998 889999999431 10 00 0111 12235699999999999999
Q ss_pred EEEEEeCCC-----ceEEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeec-CCCC-eeEEeECCEECCCCCC-
Q psy12060 467 ICRASNDRS-----ALESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELLNSETL- 534 (978)
Q Consensus 467 ~C~a~n~~g-----~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~~~~~~~~- 534 (978)
+|.|.|..| .....+.|.|. .+|.+...+....+..|+.++|.|.+.+ .|.+ .|.|+|+|..+.....
T Consensus 91 ~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 170 (218)
T 3s96_B 91 ICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDT 170 (218)
T ss_dssp EEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC------
T ss_pred EEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceec
Confidence 999999876 23345678887 5666766455555667899999999998 4666 8999999999864211
Q ss_pred --CCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCcee
Q psy12060 535 --PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 575 (978)
Q Consensus 535 --~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 575 (978)
.......+. ....|.|..... +|+|.|+|.|.|..+...
T Consensus 171 ~~~~~~~~~~~-~~s~l~i~~~~~-~d~g~Y~C~a~n~~~~~~ 211 (218)
T 3s96_B 171 SNPTKEGNKFM-ASSFLHLTSDQW-RSHNSFTCQVTHEGDTVE 211 (218)
T ss_dssp --------CEE-EEEEEEEEHHHH-HTCSCEEEEEEETTEEEE
T ss_pred CcccccCCcEE-EEEEEEEeHHHc-cCCCeEEEEEEeCCCccc
Confidence 000112222 234577887765 789999999999876443
No 349
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.70 E-value=2e-16 Score=157.60 Aligned_cols=170 Identities=17% Similarity=0.249 Sum_probs=112.4
Q ss_pred CCCceEecCCCccccCcEEEEEEeecC-------CCCeEEEEEcccccc--cccc-----cccCCCCCCceEee------
Q psy12060 195 QPTDVVFDLSKRSILNDITLSCYAGGY-------PNPSYEWFKEDYVQD--RLVA-----NLIDPLSDKRFTLS------ 254 (978)
Q Consensus 195 ~p~~~~~~~~~~~~g~~~~l~C~~~g~-------p~~~v~W~~~~~~~~--~~~~-----~~~~~~~~~~~~~~------ 254 (978)
.|.+..+. +|++++|.|.+.+. +.+.+.|||++.... .+.. .........|+.+.
T Consensus 6 ~p~~v~v~-----~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 80 (214)
T 2zg1_A 6 VQKSVTVQ-----EGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKK 80 (214)
T ss_dssp CCSEEEEE-----TTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGT
T ss_pred CCcEEEEe-----cCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCC
Confidence 35555543 46679999999854 578999999875311 0000 00112233455542
Q ss_pred cceEEEeCCCCCCCCeEEEEEEEeCceeEE---eEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCC---CCCceE
Q psy12060 255 GGNLIINDPRQVEDRGSYHCKASNKFGSII---SESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTN---YPGVNY 328 (978)
Q Consensus 255 ~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~---s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~---~p~~~i 328 (978)
+.+|.|.++ +.+|+|.|+|.+.+..+... +..+.|.|..++..+....+..+.+|+.++|.|.+..+ .|.+.|
T Consensus 81 ~~sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v 159 (214)
T 2zg1_A 81 NCSLSIGDA-RMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTF 159 (214)
T ss_dssp BCCEEECSC-CGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEE
T ss_pred eEEEEEccC-CHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceE
Confidence 337999998 89999999999998864332 24677777654322111112335678899999998543 478999
Q ss_pred EEecccccccccccceEEEeeCCcEEEeeeeeecceeeEEEEEeecc
Q psy12060 329 YWARDYFPNFVEEDKRVFVSYDGALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 329 ~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
+|+|++..... .+ ....+.|.|..+..+|+|.|+|.|.|..+
T Consensus 160 ~W~~~~~~~~~---~~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~ 201 (214)
T 2zg1_A 160 SWTGNALSPLD---PE--TTRSSELTLTPRPEDHGTNLTCQMKRQGA 201 (214)
T ss_dssp EEESSTTSSSC---SS--CCCSSEEEECCCTTCCSCEEEEEEECC--
T ss_pred EEeCCCCccCC---CC--ceeEEEEEEecccHHcCcEEEEEEEeCCC
Confidence 99999865321 11 13457899999999999999999999753
No 350
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.70 E-value=5.8e-17 Score=162.14 Aligned_cols=179 Identities=15% Similarity=0.176 Sum_probs=123.9
Q ss_pred CCcccccCCCceeEEEEeecCCCC---eeEEeECCEECCCCCC-----------CCCCCCcEEE-------ecCEEEEEe
Q psy12060 495 LTDKHMDNQADLTWTCEAFGVPDV---TYSWFRNGELLNSETL-----------PLEDQDRYFI-------QDNVLTIRY 553 (978)
Q Consensus 495 ~~~~~~~~g~~~~l~C~~~~~p~~---~i~W~~~g~~~~~~~~-----------~~~~~~~~~~-------~~~~l~i~~ 553 (978)
+....+.+|++++|.|.+.+.|.+ .|+|+|++..+..... ......++.. .+.+|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 445678899999999999987755 4899997754431100 0001122221 124699999
Q ss_pred CCCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCC
Q psy12060 554 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG 633 (978)
Q Consensus 554 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~ 633 (978)
++. +|+|.|.|.+.+..+.........+...++..... ......+..|+.+.|.|.+.+.|+|.|+|++++..+....
T Consensus 86 v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~ 163 (218)
T 4frw_A 86 AVQ-ADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLN-PGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSR 163 (218)
T ss_dssp CCG-GGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEE-ECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEE
T ss_pred ccH-HHCCceeEEEEeccCceeeeEEEEEEeeeccceee-eeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCc
Confidence 997 99999999999876655444433333333332221 2234456789999999999999999999999988765443
Q ss_pred cEEE----eecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEE
Q psy12060 634 RRKI----FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 675 (978)
Q Consensus 634 ~~~~----~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 675 (978)
.... ...+.|.|.++..+|+|.|+|.|.|..|.....+.+.|
T Consensus 164 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 164 SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 2221 11235999999999999999999999998877766554
No 351
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.70 E-value=6.3e-17 Score=161.78 Aligned_cols=166 Identities=20% Similarity=0.350 Sum_probs=112.5
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC------C-----------Cceee------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP------R-----------NAYFE------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~------~-----------~~~~~------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.| .+.|.|+|++ ..+. . ..++. ....+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (219)
T 1c1e_H 11 LKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNED 90 (219)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCccc
Confidence 457999999999999865 6799999973 3221 0 11111 123589999999999
Q ss_pred CeEEEEEEEeCCCce----EEEEEEEEEee----ceeeccCCcccccCCCceeEEEEeec-CCCC-eeEEeECCEECCCC
Q psy12060 463 QGEYICRASNDRSAL----ESSVTISIQAE----PNFTIPLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELLNSE 532 (978)
Q Consensus 463 ~G~Y~C~a~n~~g~~----~~~~~l~V~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~~~~~~ 532 (978)
+|.|+|.+.|..+.. ...+.|.|... |.+........+.+|+.++|.|.+.| .|.+ .|+|+|+|..+...
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~ 170 (219)
T 1c1e_H 91 MATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 170 (219)
T ss_dssp CEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred CEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceE
Confidence 999999999986421 23467777653 55554333345778999999999998 7888 99999998765311
Q ss_pred CCCC-CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEE
Q psy12060 533 TLPL-EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 578 (978)
Q Consensus 533 ~~~~-~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~ 578 (978)
.... ...+.+ .....|.|.... .|.|.|+|.|.|..+......
T Consensus 171 ~~~~~~~~~~~-~~~s~L~i~~~~--~d~g~Y~C~a~n~~~~~~~~~ 214 (219)
T 1c1e_H 171 TFPAVLQSDLY-TLSSSVTVPSSP--RPSETVTCNVAHPASSTKVDK 214 (219)
T ss_dssp ECCCEESSSCE-EEEEEEEEESSS--TTTSCCEEEEEEGGGTEEEEE
T ss_pred ecCCcccCCeE-EEEEEEEEeccc--CCCCEEEEEEEeCCCCccEEE
Confidence 0000 011222 223468884443 466999999999887654433
No 352
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.70 E-value=1e-16 Score=159.46 Aligned_cols=163 Identities=18% Similarity=0.301 Sum_probs=112.9
Q ss_pred CCCCCCcEEEEEEEeecC---CCeeEEEEcC--ccC------------CCCceee----ecccEEEeCCCCCCCCeEEEE
Q psy12060 410 APKAGDKVRLECVAFGYP---VPSYNWTRRG--SPL------------PRNAYFE----NFNRILTIPNVKVEDQGEYIC 468 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p---~~~v~W~~~~--~~l------------~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C 468 (978)
.+.+|++++|.|.+.+.| .+.|.|+|++ ..+ ....++. .....|.|.+++.+|+|.|.|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (212)
T 1q0x_L 11 TTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFC 90 (212)
T ss_dssp EECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred eecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEEEE
Confidence 567999999999999877 4789999964 221 0111221 123489999999999999999
Q ss_pred EEEeCCCce-EEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecCC-C-CeeEEeECCEECCCCCC---CCCC
Q psy12060 469 RASNDRSAL-ESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGVP-D-VTYSWFRNGELLNSETL---PLED 538 (978)
Q Consensus 469 ~a~n~~g~~-~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p-~-~~i~W~~~g~~~~~~~~---~~~~ 538 (978)
.|.|..+.. ...+.|.|. .+|.+...+....+..|+.++|.|.+.+.+ . +.|+|+|+|..+..... ....
T Consensus 91 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 170 (212)
T 1q0x_L 91 ALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQ 170 (212)
T ss_dssp EEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEC
T ss_pred EEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeC
Confidence 999976532 233566663 467776644444556799999999999854 3 38999999998864310 0001
Q ss_pred CCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 539 ~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
.+........|.|..+.. +|+|.|+|.|.|....
T Consensus 171 ~~g~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 171 SNNKYMASSYLTLTARAW-ERHSSYSCQVTHEGHS 204 (212)
T ss_dssp TTSCEEEEEEEEEEHHHH-TTCCEEEEEEEETTEE
T ss_pred CCCCEEEEEEEEEcHHHc-cCCCcEEEEEEeCCcc
Confidence 111122234688888875 8999999999997644
No 353
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.70 E-value=4.2e-17 Score=163.60 Aligned_cols=167 Identities=18% Similarity=0.283 Sum_probs=119.4
Q ss_pred CCCCCCCcEEEEEEEeecCC-----CeeEEEEcCccCC-------------CCceee-------ecccEEEeCCCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYPV-----PSYNWTRRGSPLP-------------RNAYFE-------NFNRILTIPNVKVEDQ 463 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~-----~~v~W~~~~~~l~-------------~~~~~~-------~~~~~L~i~~~~~~d~ 463 (978)
..+.+|++++|.|.+.+.|. +.|.|++++.... ...+.. ..+.+|.|.+++.+|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 45679999999999988764 6899999875431 011111 1256799999999999
Q ss_pred eEEEEEEEeCCCceEEEEEEEEEee---ceeeccCCcccccCCCceeEEEEe-ecCCCCeeEEeE-CCEECCCCCCCCCC
Q psy12060 464 GEYICRASNDRSALESSVTISIQAE---PNFTIPLTDKHMDNQADLTWTCEA-FGVPDVTYSWFR-NGELLNSETLPLED 538 (978)
Q Consensus 464 G~Y~C~a~n~~g~~~~~~~l~V~~~---p~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~i~W~~-~g~~~~~~~~~~~~ 538 (978)
|.|+|.+.+. +..+..+.|.|..+ |.+...+ ...+.+|+.++|.|.+ .+.|.+.+.|++ ++..+...
T Consensus 85 G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~------ 156 (222)
T 4i0k_A 85 GSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGN------ 156 (222)
T ss_dssp SCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSE------
T ss_pred EEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCC------
Confidence 9999999986 34455667777654 5555444 3467889999999999 788999999999 55554421
Q ss_pred CCcEEE--ecC---EEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEEEE
Q psy12060 539 QDRYFI--QDN---VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 584 (978)
Q Consensus 539 ~~~~~~--~~~---~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 584 (978)
...... ..+ .|.|.++.. +|+|.|+|.|.|..|....++.|.|..
T Consensus 157 ~~~~~~~~~~~~~~~l~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 206 (222)
T 4i0k_A 157 VTTSQMANERGLFDVHSVLRVVL-GANGTYSCLVRNPVLQQDAHGSVTITG 206 (222)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEC-CTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred cceeEEcCCCCeEEEEEEEEEEe-CCCCEEEEEEECCCCCCceEEEEEEeC
Confidence 000111 112 378888886 899999999999999998888888875
No 354
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.70 E-value=2.5e-16 Score=170.00 Aligned_cols=205 Identities=14% Similarity=0.064 Sum_probs=125.9
Q ss_pred CEEEEEEEEcCCCceeeeEEEEEcCCCCCCCceEEEEee-CCeeEEEeecCCC---CCCCceeEEEEEeeccccCceEec
Q psy12060 752 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH-KTSATIQWTDGAT---NGRPITHYKIIARTNWNSTWFNVS 827 (978)
Q Consensus 752 ~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P~~~~~~~~~-~~~v~l~W~~p~~---~~~~i~~Y~v~~~~~~~~~w~~~~ 827 (978)
.+.++..+.|..|.....- ...+|.||.++++.... .+++.|+|+||.+ .++.+..|.|+|+..+...|....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~---~~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~~~ 85 (380)
T 3lb6_C 9 GCLYTFLISTTFGCTSSSD---TEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTII 85 (380)
T ss_dssp -------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCEEEE
T ss_pred hhhhhheeecccccccCCc---ccccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcceEEE
Confidence 4556667778777543221 12258999999998776 6899999999876 345789999999998878897654
Q ss_pred ccccceeeeecCCceeeEEeeccCCCceeEEEEEEecC----CccCCCCCCCCCC--CCCCCCCCCCCCceeecccccCc
Q psy12060 828 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE----LGYGEPSSPSPQY--NTPADKPYQAPSRIGGGGGKIGD 901 (978)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~----~G~g~~s~~~~~~--~t~~~~P~~~P~~~~~~~~~~~s 901 (978)
.. . .....+ +..++.|+|||+|.|. .|.|.+|..+... .+.++.|+.+|.|+++...+.++
T Consensus 86 ~~----------~--~~~~~~-~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~ 152 (380)
T 3lb6_C 86 TK----------N--LHYKDG-FDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQY 152 (380)
T ss_dssp ES----------S--SEEEEE-CCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTE
T ss_pred ec----------c--EEEEEe-ecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcE
Confidence 32 1 122345 6669999999999976 7888877654222 24568888999999999999999
Q ss_pred EEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeee--ccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCC
Q psy12060 902 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE--YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 975 (978)
Q Consensus 902 i~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~ 975 (978)
+.++|++++ . .+..++|+|+|+..+...+..+.... .+......+...++.+++.|.|+|+|.|..|.++.
T Consensus 153 l~csW~p~~--~-~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s 225 (380)
T 3lb6_C 153 LLCSWKPGI--G-VLLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRS 225 (380)
T ss_dssp EEEEEECC---------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCC
T ss_pred EEEEEcCCC--C-CCCCccEEEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeecc
Confidence 999999843 2 25678999999987654444332111 11111233334467889999999999999998764
No 355
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.70 E-value=3.7e-17 Score=162.43 Aligned_cols=164 Identities=14% Similarity=0.266 Sum_probs=117.7
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEc--CccCC------------CCcee----eecccEEEeCCCCCCCCeEEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRR--GSPLP------------RNAYF----ENFNRILTIPNVKVEDQGEYICRA 470 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~--~~~l~------------~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a 470 (978)
..+.+|++++|.|.+. |.+.+.|+|+ +..+. ...++ .....+|.|.+++.+|+|.|+|.|
T Consensus 10 ~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 87 (211)
T 3tv3_L 10 ASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGS 87 (211)
T ss_dssp EEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEE
T ss_pred EEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEE
Confidence 3567999999999998 8889999995 22211 11111 123457999999999999999999
Q ss_pred EeCCC--ceEEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecC--CCCeeEEeECCEECCCCCC----CCCC
Q psy12060 471 SNDRS--ALESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGV--PDVTYSWFRNGELLNSETL----PLED 538 (978)
Q Consensus 471 ~n~~g--~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~g~~~~~~~~----~~~~ 538 (978)
.|..+ .....+.|.|. .+|.+...+....+..|+.++|.|.+.|. |.+.+.|+|+|..+..... ....
T Consensus 88 ~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 167 (211)
T 3tv3_L 88 LVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQS 167 (211)
T ss_dssp EETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECT
T ss_pred ecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECC
Confidence 99887 34455778887 67777776655556689999999999985 3689999999998864210 0001
Q ss_pred CCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceee
Q psy12060 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576 (978)
Q Consensus 539 ~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 576 (978)
...+ .....|.|..+.. +|+|.|+|.|.|..+....
T Consensus 168 ~~~~-~~~s~L~i~~~~~-~d~g~Y~C~v~~~~~~~~~ 203 (211)
T 3tv3_L 168 NNKY-AASSYLSLTPEQW-KSHRSYSCQVTHEGSTVEK 203 (211)
T ss_dssp TSSE-EEEEEEEECHHHH-HHSSCEEEEEEETTEEEEE
T ss_pred CCCE-EEEEEEEEcHHHh-CCCCeEEEEEEECCCCEEe
Confidence 1222 2234688887765 7899999999998765433
No 356
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.70 E-value=1.6e-16 Score=158.06 Aligned_cols=168 Identities=17% Similarity=0.225 Sum_probs=116.8
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEeeCC--EEe----------c--CCCcEEEeecC---cEEEccccCCCCEEEEEE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NII----------G--SGGRRKIFENG---NLLISPVSRDDSGIYSCT 659 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g--~~~----------~--~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~ 659 (978)
.+.+.+|+++.|.|.+.+.|.+.|.|+|++ ..+ . ...++.+...+ +|.|.+++.+|+|.|+|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3d9a_L 10 TLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ 89 (213)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEe
Confidence 455789999999999999998899999743 211 1 12455544333 699999999999999999
Q ss_pred EEeCCceeee-eEEEEEEe---CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCee
Q psy12060 660 ATNVHGMDES-KGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 735 (978)
Q Consensus 660 a~n~~g~~~~-~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~ 735 (978)
|.|..+.... ...|.|.. +|.+....+ ......|+.++|.|.+.+.+++.+.+.|+++|..+........ ....
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~-~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~-~~~~ 167 (213)
T 3d9a_L 90 QSNSWPYTFGGGTKLEIKRADAAPTVSIFPP-SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSW-TDQD 167 (213)
T ss_dssp ECSSSSCEECCCEEEEECCCCBCCEEEEECC-CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEE-CCCC
T ss_pred eecCCcceeCCCEEEEEecCCCCceeEeECC-ChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecC-CCcc
Confidence 9998775433 34666654 343333222 2223478899999999985555567899999998865310000 0000
Q ss_pred ec-----CCceEEEeccCCCCCEEEEEEEEcCCCce
Q psy12060 736 NI-----DGGLLEITNASFADAGEYECVVKSTVGKI 766 (978)
Q Consensus 736 ~~-----~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~ 766 (978)
.. ..+.|.|.++..+|+|.|+|.|.|.....
T Consensus 168 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 168 SKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp TTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 01 12389999999999999999999987654
No 357
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.70 E-value=6.7e-17 Score=162.62 Aligned_cols=180 Identities=14% Similarity=0.077 Sum_probs=118.0
Q ss_pred cccCcEEEEEEeecCCCC---eEEEEEcccccccccc------cccCCCCCCc-----------eEeecceEEEeCCCCC
Q psy12060 207 SILNDITLSCYAGGYPNP---SYEWFKEDYVQDRLVA------NLIDPLSDKR-----------FTLSGGNLIINDPRQV 266 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p~~---~v~W~~~~~~~~~~~~------~~~~~~~~~~-----------~~~~~~~l~i~~~~~~ 266 (978)
.+|++++|.|.+.+.|.+ .|.|+|++..+..... .........+ ....+++|.|.++ +.
T Consensus 14 ~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v-~~ 92 (225)
T 4fmk_A 14 RLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGL-RV 92 (225)
T ss_dssp ETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSC-CG
T ss_pred ecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccC-CH
Confidence 357889999999988776 4899998764321100 0000001111 1123568999998 89
Q ss_pred CCCeEEEEEEEeCceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEE
Q psy12060 267 EDRGSYHCKASNKFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVF 346 (978)
Q Consensus 267 ~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 346 (978)
+|+|.|+|.|.|..|........+.+..++.............++...+.|.+..+.|++.+.|++++..+... ....
T Consensus 93 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~--~~~~ 170 (225)
T 4fmk_A 93 EDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKD--TQEP 170 (225)
T ss_dssp GGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEE--EEEE
T ss_pred HHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCC--cceE
Confidence 99999999999988776655566666555544433344444556667788877678899999999997664321 1222
Q ss_pred EeeCC------cEEEeeeeeecceeeEEEEEeecccccccCCceeEEEcc
Q psy12060 347 VSYDG------ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFP 390 (978)
Q Consensus 347 ~~~~~------~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~ 390 (978)
...++ .|.|.++..+|+|.|+|.|.|..+..... ..++|+|.+
T Consensus 171 ~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~-~~v~l~V~Y 219 (225)
T 4fmk_A 171 GIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPIL-LPVTLSVRY 219 (225)
T ss_dssp CSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE-EEEECCBTT
T ss_pred EecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEE-EEEEEEEEE
Confidence 22222 59999999999999999999987643322 235555554
No 358
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.69 E-value=7.8e-17 Score=160.41 Aligned_cols=163 Identities=18% Similarity=0.174 Sum_probs=111.7
Q ss_pred CCeeeecccCeEEEeCCCCCCCCceEEEeccc--ccc-cc---------cccceEEEeeC---CcEEEeeeeeecceeeE
Q psy12060 303 APEIGNQNWGKAMFCDPPTNYPGVNYYWARDY--FPN-FV---------EEDKRVFVSYD---GALYFSALEQIDAGNYS 367 (978)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~--~~~-~~---------~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~ 367 (978)
....+.+|+.++|.|.+ .+.|.+.|.|+|+. ... .+ ....++.+... .+|.|.+++.+|+|.|+
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3nl4_L 9 ASVSEPVGGTVTIKCQA-SQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYY 87 (213)
T ss_dssp SEEEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CeEEEcCCCCEEEEEEe-cCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEE
Confidence 44567889999999998 45588999999953 111 10 01234444433 26999999999999999
Q ss_pred EEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEee-cCCCeeEEEEcCccCCCCc-e
Q psy12060 368 CNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFG-YPVPSYNWTRRGSPLPRNA-Y 445 (978)
Q Consensus 368 C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g-~p~~~v~W~~~~~~l~~~~-~ 445 (978)
|.|.|..+..........|.|...+..+.+.... ....+.+|+.++|.|.+.| .|.+.|+|+|++..+.... .
T Consensus 88 C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~-----~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~ 162 (213)
T 3nl4_L 88 CQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFP-----PSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIEN 162 (213)
T ss_dssp EEECCSSTTTCEECCCEEEEEECCCBCCEEEEEC-----CCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEE
T ss_pred EecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeC-----CchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeec
Confidence 9999876531122334567775432222221100 0123457999999999998 8999999999999886432 0
Q ss_pred ----------eeecccEEEeCCCCCCCCeEEEEEEE
Q psy12060 446 ----------FENFNRILTIPNVKVEDQGEYICRAS 471 (978)
Q Consensus 446 ----------~~~~~~~L~i~~~~~~d~G~Y~C~a~ 471 (978)
.....+.|.|.++..+|+|.|+|.|.
T Consensus 163 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 163 SKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 01112569999999999999999999
No 359
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.69 E-value=6.8e-17 Score=154.63 Aligned_cols=154 Identities=12% Similarity=0.080 Sum_probs=110.7
Q ss_pred CeeeecccCeEEEeCCCCCCCCceEEEecc-ccccc----------cccc--ceEEE-eeCCcEEEeeeeeecceeeEEE
Q psy12060 304 PEIGNQNWGKAMFCDPPTNYPGVNYYWARD-YFPNF----------VEED--KRVFV-SYDGALYFSALEQIDAGNYSCN 369 (978)
Q Consensus 304 ~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~-~~~~~----------~~~~--~~~~~-~~~~~L~i~~~~~~d~G~Y~C~ 369 (978)
+..+.+|+.++|.|.+....+.+.|.|+|+ +..+. .... .|+.+ ..+++|.|.+++.+|+|.|+|.
T Consensus 8 ~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~ 87 (180)
T 2dru_A 8 NVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMR 87 (180)
T ss_dssp EEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEE
T ss_pred eEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEE
Confidence 456788999999998743334679999995 32211 0111 56666 5678899999999999999999
Q ss_pred EEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEE-eecCCCeeEEEEcCccCCCCceeee
Q psy12060 370 VQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVA-FGYPVPSYNWTRRGSPLPRNAYFEN 448 (978)
Q Consensus 370 ~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~-~g~p~~~v~W~~~~~~l~~~~~~~~ 448 (978)
+.+.. .....+.|.|..++..+.+. ..++.++|.|.+ .| |.|+|+|++++..+. ..
T Consensus 88 v~~~~----~~~~~~~L~V~~~~~~P~i~-------------~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~-----~~ 144 (180)
T 2dru_A 88 MLHET----EDQWKITMEVYEMVSKPMIY-------------WECSNATLTCEVLEG-TDVELKLYQGKEHLR-----SL 144 (180)
T ss_dssp EESSS----EEEEEEEEEEECCCCCCEEE-------------EEGGGTEEEEECSSC-TTCEEEEEETTEEEE-----EE
T ss_pred EEcCC----eEEEEEEEEEECCCCCCEEE-------------ecCCCEEEEEEeCCC-CCCEEEEEECCeECc-----CC
Confidence 97654 22334788887654322221 245679999999 56 899999999999875 22
Q ss_pred cccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEE
Q psy12060 449 FNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482 (978)
Q Consensus 449 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 482 (978)
.+.+|.+.. .+|+|.|+|.|.|..+.......
T Consensus 145 ~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 145 RQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp SSSEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred CCCEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 345677633 78999999999999887665544
No 360
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.69 E-value=2.9e-16 Score=155.81 Aligned_cols=169 Identities=21% Similarity=0.310 Sum_probs=116.4
Q ss_pred cceeecCCCeEEEEEeeccCCCCeeEEeeC--CEEe------------cCCCcEEEeecC---cEEEccccCCCCEEEEE
Q psy12060 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSC 658 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--g~~~------------~~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C 658 (978)
....+.+|++++|.|.+.+.|.+.+.|+++ |..+ ....++.+...+ +|.|.+++.+|+|.|+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (210)
T 1lk3_L 8 PALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFC 87 (210)
T ss_dssp SEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEE
Confidence 445688999999999999998889999984 2221 112455444332 69999999999999999
Q ss_pred EEEeCCceeee-eEEEEEEe---CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCe
Q psy12060 659 TATNVHGMDES-KGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 734 (978)
Q Consensus 659 ~a~n~~g~~~~-~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~ 734 (978)
.|.|..+.... ...|.|.. +|.+....+. .....|+.++|.|.+.+.+++.+.+.|+++|..+........ ...
T Consensus 88 ~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~-~~~ 165 (210)
T 1lk3_L 88 QQSWNGPLTFGAGTKLELKRADAAPTVSIFPPS-TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSV-TDQ 165 (210)
T ss_dssp EECSSSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEE-CCC
T ss_pred EEEcCCCceeCCCEEEEEcCCCcCCeEEEECCc-hhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEcc-CCc
Confidence 99998764432 34666654 3333322222 223478899999999986655578899999998764300000 000
Q ss_pred eecCC-----ceEEEeccCCCCCEEEEEEEEcCCCce
Q psy12060 735 INIDG-----GLLEITNASFADAGEYECVVKSTVGKI 766 (978)
Q Consensus 735 ~~~~~-----~~l~i~~~~~~d~g~Y~c~a~n~~G~~ 766 (978)
...++ +.|.|..+..+|+|.|+|.|.|.....
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 166 DSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 11111 379999999999999999999987643
No 361
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.69 E-value=1e-16 Score=159.50 Aligned_cols=163 Identities=18% Similarity=0.313 Sum_probs=115.4
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcCccCC--------------CCceee----ecccEEEeCCCCCCCCeEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLP--------------RNAYFE----NFNRILTIPNVKVEDQGEYICRAS 471 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~--------------~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~ 471 (978)
.+.+|++++|.|.+.+.|.+.|.|+|.+.... ...++. ....+|.|.+++.+|+|.|+|.|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (213)
T 3r06_A 12 PASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQY 91 (213)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEEC
T ss_pred EecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEecc
Confidence 56799999999999999889999999431110 011111 123489999999999999999999
Q ss_pred eCCCc-eEEEEEEEE---EeeceeeccCCcccccCCCceeEEEEeecCC--CCeeEEeECCEECCCCC----CCCCCCCc
Q psy12060 472 NDRSA-LESSVTISI---QAEPNFTIPLTDKHMDNQADLTWTCEAFGVP--DVTYSWFRNGELLNSET----LPLEDQDR 541 (978)
Q Consensus 472 n~~g~-~~~~~~l~V---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~g~~~~~~~----~~~~~~~~ 541 (978)
|..+. ....+.|.| ..+|.+...+....+..|+.++|.|.+.+.+ .+.+.|+|+|..+.... ........
T Consensus 92 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g 171 (213)
T 3r06_A 92 YNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDS 171 (213)
T ss_dssp SSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTC
T ss_pred cCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCC
Confidence 87543 233456777 5677777766666667888999999999764 35899999999886421 00111122
Q ss_pred EEEecCEEEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 542 ~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
.......|.|..... +|+|.|+|.|.|....
T Consensus 172 ~~~~~s~l~i~~~~~-~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 172 TYSLSSTLSLTKADY-ERHNLYTCEVTHKTST 202 (213)
T ss_dssp CEEEEEEEEEEHHHH-HTCCEEEEEEEETTCS
T ss_pred cEEEEEEEEeCHHHh-ccCCeEEEEEEecccC
Confidence 222334677887765 7899999999997644
No 362
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.69 E-value=2.6e-16 Score=156.91 Aligned_cols=165 Identities=15% Similarity=0.260 Sum_probs=111.6
Q ss_pred CCCCCCCcEEEEEEEe-ecC-CCeeEEEEcCc--cCC------------CCceee----ecccEEEeCCCCCCCCeEEEE
Q psy12060 409 EAPKAGDKVRLECVAF-GYP-VPSYNWTRRGS--PLP------------RNAYFE----NFNRILTIPNVKVEDQGEYIC 468 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~-g~p-~~~v~W~~~~~--~l~------------~~~~~~----~~~~~L~i~~~~~~d~G~Y~C 468 (978)
..+.+|++++|.|.+. +.+ .+.|.|+|++. .+. ...++. ....+|.|.+++.+|+|.|+|
T Consensus 10 ~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 89 (216)
T 2xzc_L 10 VSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC 89 (216)
T ss_dssp EEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEE
Confidence 3567999999999954 443 57999999642 210 011111 123479999999999999999
Q ss_pred EEEeCCC--ceEEEEEEEEE---eeceeeccCCcccccCCCceeEEEEeec-CCCC-eeEEeECCEECCCC-C---CCCC
Q psy12060 469 RASNDRS--ALESSVTISIQ---AEPNFTIPLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELLNSE-T---LPLE 537 (978)
Q Consensus 469 ~a~n~~g--~~~~~~~l~V~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~~~~~~-~---~~~~ 537 (978)
.|.|..+ .....+.|.|. .+|.+...+.......|+.++|.|.+.| .|.+ .|+|+|+|..+... . ....
T Consensus 90 ~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~ 169 (216)
T 2xzc_L 90 GTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQD 169 (216)
T ss_dssp EEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCC
T ss_pred EEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCccc
Confidence 9999876 12234566665 4566665333333446889999999998 4554 89999999988643 0 0011
Q ss_pred CCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCce
Q psy12060 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574 (978)
Q Consensus 538 ~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~ 574 (978)
..+........|.|..+.. +|+|.|+|.|.|.....
T Consensus 170 ~~~g~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 170 SKDSTYSLSSTLTLSKADY-EKHKVYACEVTHQGLSS 205 (216)
T ss_dssp TTTCCEEEEEEEEEEHHHH-TTCCEEEEEEECTTCSS
T ss_pred CCCCCEEEEEEEEECHHHh-CCCCcEEEEEEcCCCCC
Confidence 1111122234788998875 89999999999976543
No 363
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=99.69 E-value=7.8e-17 Score=151.11 Aligned_cols=117 Identities=13% Similarity=0.202 Sum_probs=96.1
Q ss_pred eeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcCCCC-CCccccc
Q psy12060 39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTN-LNELDAA 117 (978)
Q Consensus 39 ~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~dg~~-~~~~~~~ 117 (978)
+||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++.. ....+||||.+. ++.|.|.||+. +...+..
T Consensus 1 wcY~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~fl~~~~~~--~~~~~WIGl~~~--~~~~~W~dg~~~~~~~y~~ 75 (164)
T 3cfw_A 1 WTYHYSEKP-MNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPF--SRSYYWIGIRKI--GGIWTWVGTNKSLTEEAEN 75 (164)
T ss_dssp CEEEEEEEE-ECHHHHHHHHHHHSSEECCCCSHHHHHHHHHHSCC--CTTCEEESEEEE--TTEEEETTTCCBCCTTTCC
T ss_pred CeEEEecCC-cCHHHHHHHHHHCCCEECccCCHHHHHHHHHHhcc--CCccEEEeEECC--CCEEEECCCCcccccccCC
Confidence 499999994 99999999999999999999999999999998853 245799999874 78999999985 4322456
Q ss_pred CCCCCCCcc--cCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 118 FLPEPADNV--QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 118 ~~~~~~~~~--~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|.+++|++. .++|+.+..........|.+..|.....|+|+..
T Consensus 76 W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~~~~fICe~~ 120 (164)
T 3cfw_A 76 WGDGEPNNKKNKEDCVEIYIKRNKDAGKWNDDACHKLKAALCYTA 120 (164)
T ss_dssp BCTTCCCCGGGCCCEEEECTTCSSSTTCEEEECTTSCEEEEEEEC
T ss_pred CCCCCCCCCCCCccceeeeccCCCCCCceeCCCCCCCcEeEEccC
Confidence 888888763 6899999754322234789999999999999984
No 364
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=142.46 Aligned_cols=106 Identities=22% Similarity=0.254 Sum_probs=86.2
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCceeec-ccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCC---ccceeeeeeecc
Q psy12060 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGG-GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND---TEFQSETLKEYG 942 (978)
Q Consensus 867 G~g~~s~~~~~~~t~~~~P~~~P~~~~~~-~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~---~~~~~~~~~~~~ 942 (978)
|.|++|... .++|.+++|..+|.++++. ..+.++|.|+|++|+....||.|++|+|+|+..+. ..|... + ..
T Consensus 1 G~g~~S~~v-~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~--~~ 76 (124)
T 2dbj_A 1 GSSGSSGWI-LASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEE-V--GQ 76 (124)
T ss_dssp CCSCCCCCC-CCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEE-E--ES
T ss_pred CcCCCCCCE-EEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEE-e--CC
Confidence 678888877 7889999999999999998 68899999999997668899999999999975432 233221 1 12
Q ss_pred ceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 943 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 943 ~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
+. ..+.|.+|.|++.|.|+|+|+|.+|.||+|++
T Consensus 77 ~~--~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~ 110 (124)
T 2dbj_A 77 NG--SRARISVQVHNATCTVRIAAVTRGGVGPFSDP 110 (124)
T ss_dssp TT--SCEEEECCCSSSEEEECEEEEESSCBCCCCCC
T ss_pred Cc--ceEEecCCCCCCEEEEEEEEECCCccCCCCCC
Confidence 22 23668999999999999999999999999974
No 365
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.69 E-value=1.1e-16 Score=139.84 Aligned_cols=103 Identities=22% Similarity=0.333 Sum_probs=84.8
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeE
Q psy12060 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946 (978)
Q Consensus 867 G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~ 946 (978)
|.|++|... .++|.+++|..+|.++++.. +.++|.|+|++|+....||.|++|+|+|+..+...+.. ... +.+
T Consensus 1 G~G~~S~~v-~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~--~~~--~~~- 73 (117)
T 1wj3_A 1 GSSGSSGTV-NVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV--LNT--NKT- 73 (117)
T ss_dssp CCCCCCCCC-CCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEE--EEE--SSS-
T ss_pred CcCCCCCCE-EEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeE--EeC--CCc-
Confidence 778888877 78999999998999999987 88899999999877889999999999999877554421 111 112
Q ss_pred EEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 947 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 947 ~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
.+.+. |.|++.|.|+|+|+|.+|.||+|++
T Consensus 74 -~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~ 103 (117)
T 1wj3_A 74 -SAELV-LPIKEDYIIEVKATTDGGDGTSSEQ 103 (117)
T ss_dssp -EEEEE-CCCSSCEEEEEEEEESSCCCCBCCC
T ss_pred -EEEEE-CCCCCEEEEEEEEECCCccCCCCCC
Confidence 24455 9999999999999999999999963
No 366
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.69 E-value=6.4e-16 Score=156.80 Aligned_cols=175 Identities=14% Similarity=0.155 Sum_probs=110.0
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcc--cccccccccc-----cCCCCCCceEee-----cceEE
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVANL-----IDPLSDKRFTLS-----GGNLI 259 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~--~~~~~~~~~~-----~~~~~~~~~~~~-----~~~l~ 259 (978)
++..|.+..+. +|++++|.|. .+.|.+.|.|+|++ ..+..+.... .......++.+. ..+|.
T Consensus 3 v~q~p~~~~v~-----~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~ 76 (238)
T 2p1y_A 3 VTQSPRNKVAV-----TGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLI 76 (238)
T ss_dssp EEEECSEEEEE-----TTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEE
T ss_pred ceECccceEEe-----CCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEE
Confidence 34446666544 4667999999 78899999999973 1111000000 001112344332 34799
Q ss_pred EeCCCCCCCCeEEEEEEEeCcee----EEeEEEEEEEeeecc------------cccCCCCeeeecccCeEEEeCCCCCC
Q psy12060 260 INDPRQVEDRGSYHCKASNKFGS----IISESVQLAFGFIGE------------FNLKRAPEIGNQNWGKAMFCDPPTNY 323 (978)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~----~~s~~~~l~v~~~~~------------~~~~~~~~~~~~~~~~~l~C~~~~~~ 323 (978)
|.++ +.+|+|.|+|.|.|..|. .....+.|.|...+. +...+....+.+|+.++|.|.+ .+.
T Consensus 77 I~~v-~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~-~~~ 154 (238)
T 2p1y_A 77 LELA-TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSY-ENS 154 (238)
T ss_dssp ESSC-CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEEC-CCT
T ss_pred EecC-CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEE-ecC
Confidence 9998 899999999999998652 122345666644332 2222334567889999999998 566
Q ss_pred CCceEEEeccccc--cc----------ccccceEEEee-----CCcEEEeeeeeecceeeEEEEEeec
Q psy12060 324 PGVNYYWARDYFP--NF----------VEEDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQSKV 374 (978)
Q Consensus 324 p~~~i~W~~~~~~--~~----------~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~~~n~~ 374 (978)
|.+.+.|+|++.. .. .....++.+.. .++|.|.+++.+|+|.|+|.|.|..
T Consensus 155 p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 155 AFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp TCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 7889999997421 00 01123444432 2479999999999999999999863
No 367
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.69 E-value=8.1e-16 Score=157.34 Aligned_cols=174 Identities=17% Similarity=0.265 Sum_probs=114.2
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEccccc--ccccc--cccCCCCCCceEee----cceEEEeCC
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQ--DRLVA--NLIDPLSDKRFTLS----GGNLIINDP 263 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~--~~~~~--~~~~~~~~~~~~~~----~~~l~i~~~ 263 (978)
++..|.+..+. +|++++|.|.+.+.|.+.+.|+|++... ..+.. .........++... ..+|.|.++
T Consensus 7 v~~~p~~~~v~-----~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 81 (250)
T 3esu_F 7 LIQSTSSLSAS-----LGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNL 81 (250)
T ss_dssp EECSCSEEEEC-----TTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCEEEee-----CCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccC
Confidence 44446655543 4667999999999999999999964211 00000 00011123344332 227999997
Q ss_pred CCCCCCeEEEEEEEeCceeEEeEEEEEEEeee-------------------cccccCCCCeeeecccCeEEEeCCCCCCC
Q psy12060 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFI-------------------GEFNLKRAPEIGNQNWGKAMFCDPPTNYP 324 (978)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~-------------------~~~~~~~~~~~~~~~~~~~l~C~~~~~~p 324 (978)
+.+|+|.|.|.|.|..+...+....|.|... +.....+....+.+|+.++|.|.+. +.|
T Consensus 82 -~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~~~ 159 (250)
T 3esu_F 82 -EQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDS-GYA 159 (250)
T ss_dssp -CGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECC-STT
T ss_pred -ChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEec-CCc
Confidence 8999999999999987765555566766543 1222334456678899999999984 444
Q ss_pred --CceEEEecc--cccccc---------------cccceEEEeeCC-----cEEEeeeeeecceeeEEEEEe
Q psy12060 325 --GVNYYWARD--YFPNFV---------------EEDKRVFVSYDG-----ALYFSALEQIDAGNYSCNVQS 372 (978)
Q Consensus 325 --~~~i~W~~~--~~~~~~---------------~~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~~~n 372 (978)
.+.+.|+|+ +..... ....++.+..++ +|.|.+++.+|+|.|+|.+.+
T Consensus 160 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 160 FSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp GGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 689999997 433211 112445554332 699999999999999999987
No 368
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.69 E-value=2.6e-17 Score=163.69 Aligned_cols=162 Identities=19% Similarity=0.320 Sum_probs=114.6
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcC--ccCC------------CCceee----ecccEEEeCCCCCCCCeEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRG--SPLP------------RNAYFE----NFNRILTIPNVKVEDQGEYICRAS 471 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~l~------------~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~ 471 (978)
.+.+|++++|.|.+.+.|.+.|.|+|++ ..+. ...++. .....|.|.+++.+|+|.|+|.|.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 89 (212)
T 1nfd_E 10 SVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCLSS 89 (212)
T ss_dssp EEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEEEE
Confidence 5679999999999988888899999963 2220 011111 123489999999999999999999
Q ss_pred eCCC-ce--EEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCCCCC---CCCC
Q psy12060 472 NDRS-AL--ESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSETLP---LEDQ 539 (978)
Q Consensus 472 n~~g-~~--~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~---~~~~ 539 (978)
|..+ .. ...+.|.|. .+|.+...+....+.+|+.++|.|.+.|. |. +.|+|+|+|..+...... ....
T Consensus 90 n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~ 169 (212)
T 1nfd_E 90 YGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQG 169 (212)
T ss_dssp ETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSS
T ss_pred cccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecC
Confidence 7322 21 223556664 45666664544556689999999999987 54 799999999988643210 1112
Q ss_pred CcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 540 DRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 540 ~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
+.+ ...+.|.|.++.. +|+|.|+|.|.|..+.
T Consensus 170 ~~~-~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 170 QNY-MTSSYLSLTADQW-KSHNRVSCQVTHEGET 201 (212)
T ss_dssp SCE-EEEEBCCEEHHHH-HTCSCEEEEEECTTTT
T ss_pred CCc-eEEEEEEEchhhc-CCCCeEEEEEEeCCce
Confidence 222 2235789999986 8999999999998765
No 369
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.69 E-value=2e-16 Score=158.19 Aligned_cols=175 Identities=15% Similarity=0.166 Sum_probs=123.7
Q ss_pred cceeecCCCeEEEEEeeccCCCC---eeEEeeCCEEecCC------------------CcEEEe------ecCcEEEccc
Q psy12060 596 SETYAGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSG------------------GRRKIF------ENGNLLISPV 648 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p~~---~i~W~~~g~~~~~~------------------~~~~~~------~~~~l~i~~~ 648 (978)
..+.+..|++++|.|.+.+.|.+ .|+|+|++..+... .+.... .+++|.|.++
T Consensus 7 ~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v 86 (218)
T 4frw_A 7 DVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA 86 (218)
T ss_dssp SEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSC
T ss_pred CeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeec
Confidence 45668899999999999998866 48999976543211 111111 1246999999
Q ss_pred cCCCCEEEEEEEEeCCceeeee-EEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccc
Q psy12060 649 SRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 727 (978)
Q Consensus 649 ~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~ 727 (978)
+.+|+|.|.|.+.+..+..... ..+.+..++...........+..+..+.+.|.+.+.|+|. +.|++++..+.....
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~--i~W~~~~~~~~~~~~ 164 (218)
T 4frw_A 87 VQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPS--VTWDTEVKGTTSSRS 164 (218)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCE--EEEEESSCCEEEEEE
T ss_pred cHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCce--EEEEECCcccccCce
Confidence 9999999999999876655444 3444444444444445556667788999999999998764 589999877654221
Q ss_pred ccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy12060 728 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 774 (978)
Q Consensus 728 ~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v 774 (978)
... .......+.|.|..+..+|+|.|+|.|.|..|..+..+.+.+
T Consensus 165 ~~~--~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 165 FKH--SRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EEC--SSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred Eec--CCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 000 111112347999999999999999999999998877776665
No 370
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.69 E-value=4.6e-17 Score=162.10 Aligned_cols=179 Identities=17% Similarity=0.237 Sum_probs=113.6
Q ss_pred CeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccccc--cccc--cccCCCCCCceEee----cceEEEe
Q psy12060 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYVQD--RLVA--NLIDPLSDKRFTLS----GGNLIIN 261 (978)
Q Consensus 190 P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~--~~~~--~~~~~~~~~~~~~~----~~~l~i~ 261 (978)
|.++..|....+. +|++++|.|.+.|.|.+.+.|||.+.... .... .........++... +.+|.|.
T Consensus 2 ~~v~~~p~~~~v~-----~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 76 (213)
T 3r06_A 2 IQMTQSPSSLPAS-----LGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTIS 76 (213)
T ss_dssp CCEEEECSEEEEC-----TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred CeeEeCCCEEEec-----CCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEEC
Confidence 3455556666644 46679999999999999999999542110 0000 00011123344432 3379999
Q ss_pred CCCCCCCCeEEEEEEEeCceeEEeEEEEEEE---eeecccccCCCCeeeecccCeEEEeCCCCCCC-CceEEEecccccc
Q psy12060 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAF---GFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYP-GVNYYWARDYFPN 337 (978)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v---~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p-~~~i~W~~~~~~~ 337 (978)
++ +.+|+|.|+|.|.|..+......+.|.| ..+|.+...........++.++|.|.+.++.| .+.|+|+|+|.++
T Consensus 77 ~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l 155 (213)
T 3r06_A 77 SL-ESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEK 155 (213)
T ss_dssp SC-CGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred CC-CcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCccc
Confidence 98 8999999999999987655556667777 23333333233333445667999999855444 4689999998775
Q ss_pred cccc--cceEEEeeCC------cEEEeeeeeecceeeEEEEEeec
Q psy12060 338 FVEE--DKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKV 374 (978)
Q Consensus 338 ~~~~--~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~~~n~~ 374 (978)
.... ........++ .|.|.....+|+|.|+|.|.|..
T Consensus 156 ~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~ 200 (213)
T 3r06_A 156 RDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKT 200 (213)
T ss_dssp CTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETT
T ss_pred CCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecc
Confidence 3211 0111111222 47777888889999999999975
No 371
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.69 E-value=2.6e-17 Score=164.91 Aligned_cols=170 Identities=15% Similarity=0.182 Sum_probs=119.0
Q ss_pred CCCCCCCcEEEEEEEee-cCCCe----eEEEEcCccCCC-------------Cce--ee-------ecccEEEeCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFG-YPVPS----YNWTRRGSPLPR-------------NAY--FE-------NFNRILTIPNVKVE 461 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g-~p~~~----v~W~~~~~~l~~-------------~~~--~~-------~~~~~L~i~~~~~~ 461 (978)
..+.+|++++|.|.+.+ .+.+. |.|+|++..... ..+ +. ..+.+|.|.+++.+
T Consensus 9 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~ 88 (221)
T 3eow_R 9 VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVE 88 (221)
T ss_dssp CCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCC
T ss_pred EEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChH
Confidence 35679999999999854 44444 999999753211 111 11 13568999999999
Q ss_pred CCeEEEEEEEeCC-CceEEEEEEEEEeeceeeccCCcccccCCCcee-EEEEee-cCCCCeeEEeECCEECCCCCCCCCC
Q psy12060 462 DQGEYICRASNDR-SALESSVTISIQAEPNFTIPLTDKHMDNQADLT-WTCEAF-GVPDVTYSWFRNGELLNSETLPLED 538 (978)
Q Consensus 462 d~G~Y~C~a~n~~-g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~-l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~ 538 (978)
|+|.|+|.+.+.. +.....+.|.|..+|.+...+.... ..|+.+. |.|.+. +.|.+.|+|++++............
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~ 167 (221)
T 3eow_R 89 DEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGF 167 (221)
T ss_dssp CCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCC
T ss_pred HCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecC
Confidence 9999999999976 7788889999999998765433333 6788885 999987 7899999999875433211100001
Q ss_pred CCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEE
Q psy12060 539 QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQL 580 (978)
Q Consensus 539 ~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 580 (978)
..........|.|..+.. +|+|.|+|.|.|..+.......+
T Consensus 168 ~~~~~~~~s~L~i~~~~~-~d~g~ytC~a~n~~~~~~~~~~v 208 (221)
T 3eow_R 168 LSGTVTVTSLWILVPSSQ-VDGKQVTCKVEHESFEKPQLLTV 208 (221)
T ss_dssp CBTTBCCEEEEECCCCSC-CCCCCEEEEECCSCSSSCEEEEE
T ss_pred CCCcEEEEEEEEEeCCHH-HCCCeEEEEEECCCCCCCeEEEE
Confidence 111112234688888875 89999999999988765444433
No 372
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.68 E-value=5.4e-16 Score=154.40 Aligned_cols=177 Identities=20% Similarity=0.247 Sum_probs=131.7
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEeeCCEEecCC--CcEEEee---cCcEEEccccCCCCEEEEEEEEeCCceeeeeE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFE---NGNLLISPVSRDDSGIYSCTATNVHGMDESKG 671 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~--~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 671 (978)
...+..|+.+.|.|.+.|.|.|.+.|+++|..+... .++.+.. .+.|.|.++..+|+|.|+|.|.|..|.....+
T Consensus 27 ~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 106 (215)
T 3mtr_A 27 AVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEF 106 (215)
T ss_dssp EEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEE
Confidence 366889999999999999999999999999998765 3444443 34699999999999999999999999999888
Q ss_pred EEEEEeCCceeeeCCCceEEEccccEEEEEEee----ecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEecc
Q psy12060 672 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH----TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 747 (978)
Q Consensus 672 ~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 747 (978)
.|.|..+|..+... .....+..+.|.|... +.|...+.+.|.+++......... ..........|.|.++
T Consensus 107 ~l~v~~~P~~p~~~---~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~---~~~~~~~~~~l~i~~L 180 (215)
T 3mtr_A 107 ILVQADTPSSPSID---QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY---DAKEASMEGIVTIVGL 180 (215)
T ss_dssp EEEECCCCCCCEEE---EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEE---EHHHHHHHTEEEEECC
T ss_pred EEEECCCCCCCcce---EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccc---ccccccccccEEECCC
Confidence 99888776543221 1234567899999743 234445568899887542210000 0000011268999999
Q ss_pred CCCCCEEEEEEEEcCCCceeeeEEEEEcCCCC
Q psy12060 748 SFADAGEYECVVKSTVGKISTKTTVIVEGPPG 779 (978)
Q Consensus 748 ~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~ 779 (978)
...+.|.|+|.|.|..|....+..+.+..+|.
T Consensus 181 ~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 181 KPETTYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp CTTCEEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred CCCCEEEEEEEEEeCCcccCcccceeeEeccc
Confidence 99999999999999999887777777777664
No 373
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.68 E-value=1.5e-16 Score=160.03 Aligned_cols=172 Identities=15% Similarity=0.200 Sum_probs=118.4
Q ss_pred CCCCCCcEEEEEEEeecCCC---eeEEEEcCccCCC----------------C-----------ceeeecccEEEeCCCC
Q psy12060 410 APKAGDKVRLECVAFGYPVP---SYNWTRRGSPLPR----------------N-----------AYFENFNRILTIPNVK 459 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~---~v~W~~~~~~l~~----------------~-----------~~~~~~~~~L~i~~~~ 459 (978)
.+..|++++|.|.+.+.|.+ .|+|+|++..+.. . ......+.+|.|.+++
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 91 (225)
T 4fmk_A 12 RGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLR 91 (225)
T ss_dssp EEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCC
T ss_pred EEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCC
Confidence 34689999999999987766 4899998754310 0 0011234579999999
Q ss_pred CCCCeEEEEEEEeCCCceE-EEEEEEEEeeceeeccCCcccccCCCceeEEEEee-cCCCCeeEEeECCEECCCCCCCCC
Q psy12060 460 VEDQGEYICRASNDRSALE-SSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLE 537 (978)
Q Consensus 460 ~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~ 537 (978)
.+|+|.|+|.|.|..+... ....+.+..+|.+...+.......++.+.+.|.+. +.|.+.+.|++++..+........
T Consensus 92 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~ 171 (225)
T 4fmk_A 92 VEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPG 171 (225)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEEEC
T ss_pred HHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcceEE
Confidence 9999999999998766544 44566666666666555555667778888888765 568899999998765432111000
Q ss_pred CCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEE
Q psy12060 538 DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582 (978)
Q Consensus 538 ~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 582 (978)
.........+.|.|..+.. +|+|.|+|.|.|..+....+..+.+
T Consensus 172 ~~~~~~~~~s~L~i~~~~~-~d~g~YtC~a~N~~~~~~~~~~v~l 215 (225)
T 4fmk_A 172 IQAGTVTIISRYSLVPVGR-ADGVKVTCRVEHESFEEPILLPVTL 215 (225)
T ss_dssp SSTTCEEEEEEEEECCCGG-GTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred ecCCCEEEEEEEEEeeCCH-HHCCEEEEEEEcCCCCeEEEEEEEE
Confidence 1111122234799999886 8999999999998887655554443
No 374
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=99.68 E-value=1.7e-16 Score=148.38 Aligned_cols=117 Identities=11% Similarity=0.181 Sum_probs=96.0
Q ss_pred eeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcCCC-CCCccccc
Q psy12060 39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGT-NLNELDAA 117 (978)
Q Consensus 39 ~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~dg~-~~~~~~~~ 117 (978)
+||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++... ...+||||.+. ++.|.|.||+ ++...+..
T Consensus 1 w~Y~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~--~~~~WIGl~~~--~~~~~W~dg~~~~~~~~~~ 75 (162)
T 1g1s_A 1 WTYHYSTKA-YSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYY--SSYYWIGIRKN--NKTWTWVGTKKALTNEAEN 75 (162)
T ss_dssp CEEEEEEEE-ECHHHHHHHHHHHSSEECCCCCHHHHHHHHHHSCCC--TTCEEEEEEEE--TTEEEETTTCCBCCTTTCC
T ss_pred CeEEEecCC-cCHHHHHHHHHhcCCEEeeeCCHHHHHHHHHHhccC--CCCEEEeEECC--CCCeEECCCCccCCcccCc
Confidence 499999994 999999999999999999999999999999988542 35789999886 7899999997 55422456
Q ss_pred CCCCCCCcc--cCceEEEEecccccceeeeecCCCcceeeEEEec
Q psy12060 118 FLPEPADNV--QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEAS 160 (978)
Q Consensus 118 ~~~~~~~~~--~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 160 (978)
|.+++|++. .++|+.+..........|.+..|.....|+|+..
T Consensus 76 W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~~~~fICe~~ 120 (162)
T 1g1s_A 76 WADNEPNNKRNNEDCVEIYIKSPSAPGKWNDEHCLKKKHALCYTA 120 (162)
T ss_dssp BCTTCCCCTTSCCCEEEECTTCSSSTTCEEEECTTSCEEEEEEEC
T ss_pred cCCCCCCCCCCCcceEEEeccCCCCCCeEECCCCCCCCCEEEEeC
Confidence 888888763 6799998654322234789999999999999983
No 375
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=99.68 E-value=1.5e-16 Score=148.14 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=95.4
Q ss_pred eeEEEEccCCCCHHHHHHHhhhcCCeeeeeCChhhHHHHHHHhhccCCCCceEEEEeecCCCccEEEcCCCC-CCccccc
Q psy12060 39 SCYRFVKSPLKTRNDAKLNCKSLDSDLANVNDADEHGFIMYQLFWQDPQRRKWYFGGTQQSPNLWVNEDGTN-LNELDAA 117 (978)
Q Consensus 39 ~Cy~~~~~~~~~~~~A~~~C~~~~~~L~~i~~~~e~~~i~~~~~~~~~~~~~w~g~~~~~~~~~w~w~dg~~-~~~~~~~ 117 (978)
.||+|+... ++|.+|+..|+.+||+||+|++++|++||.+++... ...+||||.+. ++.|.|.||+. +...+..
T Consensus 1 w~Y~~~~~~-~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~--~~~~WIGl~~~--~~~~~W~dg~~~~~~~y~~ 75 (157)
T 1g1t_A 1 WSYNTSTEA-MTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYS--PSYYWIGIRKV--NNVWVWVGTQKPLTEEAKN 75 (157)
T ss_dssp CEEEECSSC-BCHHHHHHHHHHHSSEECCCCSHHHHHHHHHHSCCC--TTCEEESEEEE--TTEEEETTTCCBCCTTTCC
T ss_pred CceEeCCCc-cCHHHHHHHHHHCCCEEcccCCHHHHHHHHHHhccC--CCCEEEEEECC--CCeeEEeCCCccCCcccCC
Confidence 499999994 999999999999999999999999999999988532 35689999874 78999999984 4322456
Q ss_pred CCCCCCCcc--cCceEEEEecccccceeeeecCCCcceeeEEEe
Q psy12060 118 FLPEPADNV--QRDYLAYSFSQSLKRWGFERVTGMEPLLFICEA 159 (978)
Q Consensus 118 ~~~~~~~~~--~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 159 (978)
|.+++|++. .++|+.+..........|.+..|.....|+|+.
T Consensus 76 W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~~~~fICe~ 119 (157)
T 1g1t_A 76 WAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCSKKKLALCYT 119 (157)
T ss_dssp BCTTCCCCCSTTCCEEEECTTCSSSTTCEEEECTTSCBEEEEEE
T ss_pred CCCCcCCCCCCCCCceEEeCcCCCCCCccccCCCCCCcceEeCc
Confidence 888888763 679999875432223478999999999999998
No 376
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.67 E-value=5.1e-16 Score=158.83 Aligned_cols=181 Identities=19% Similarity=0.147 Sum_probs=115.4
Q ss_pred ccCcEEEEEEeecCC--CCeEEEEEcc--ccccccccc-------ccCCCCCCceEee------cceEEEeCCCCCCCCe
Q psy12060 208 ILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVAN-------LIDPLSDKRFTLS------GGNLIINDPRQVEDRG 270 (978)
Q Consensus 208 ~g~~~~l~C~~~g~p--~~~v~W~~~~--~~~~~~~~~-------~~~~~~~~~~~~~------~~~l~i~~~~~~~d~G 270 (978)
+|++++|.|.+.|.| .+.|.|||++ ..+..+... ........|+.+. ..+|.|.++ +.+|+|
T Consensus 14 ~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~DsG 92 (256)
T 1nqb_A 14 PGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL-TSEDSA 92 (256)
T ss_dssp TTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC-CGGGCE
T ss_pred CCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC-ChhhCE
Confidence 467799999999886 6799999964 221111000 0011123455443 247999998 899999
Q ss_pred EEEEEEEeCcee----EEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCC-----ceEEEec--ccccccc
Q psy12060 271 SYHCKASNKFGS----IISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-----VNYYWAR--DYFPNFV 339 (978)
Q Consensus 271 ~Y~C~a~n~~g~----~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-----~~i~W~~--~~~~~~~ 339 (978)
.|+|.|.|..|. ..+..+.|.|...+.+...+....+.+|+.++|.|.+. +.|+ +.|.|+| ++..+..
T Consensus 93 ~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~~~~~~v~W~k~~~g~~~~~ 171 (256)
T 1nqb_A 93 VYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSS-QSIVHSNGNTYLEWYLQKPGQSPKL 171 (256)
T ss_dssp EEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEES-SCCBCTTSCBCEEEEEECTTSCEEE
T ss_pred EEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEec-CcccccccceEEEEEEECCCCCcEE
Confidence 999999998662 33345667766544433334445678899999999984 4454 4999999 5543210
Q ss_pred ----------cccceEEEee---CCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCC
Q psy12060 340 ----------EEDKRVFVSY---DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392 (978)
Q Consensus 340 ----------~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~ 392 (978)
....++.... .++|.|.+++.+|+|.|+|.|.+..... -..-..|.|..++
T Consensus 172 ~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~--fg~gt~l~V~~~~ 235 (256)
T 1nqb_A 172 LIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYT--FGGGTKLEIKRAA 235 (256)
T ss_dssp EEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCE--ECCCEEEEECC--
T ss_pred EEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceE--ECCCEEEEEECCC
Confidence 0123443332 2369999999999999999998753211 1223577776544
No 377
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.67 E-value=3.1e-16 Score=159.18 Aligned_cols=165 Identities=18% Similarity=0.286 Sum_probs=115.9
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcCcc--C------------CCCceee----ecccEEEeCCCCCCCCeEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSP--L------------PRNAYFE----NFNRILTIPNVKVEDQGEYICRAS 471 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~--l------------~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~ 471 (978)
.+.+|++++|.|.+.+.|.+.+.|+|++.. . ....++. ..+.+|.|.+++.+|+|.|+|.+.
T Consensus 35 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 114 (237)
T 3sob_L 35 SASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQS 114 (237)
T ss_dssp EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEeec
Confidence 567899999999999988889999995311 1 0011111 134579999999999999999998
Q ss_pred eCCCce-EEEEEEEE---EeeceeeccCCcccccCCCceeEEEEeecC-C-CCeeEEeECCEECCCCC----CCCCCCCc
Q psy12060 472 NDRSAL-ESSVTISI---QAEPNFTIPLTDKHMDNQADLTWTCEAFGV-P-DVTYSWFRNGELLNSET----LPLEDQDR 541 (978)
Q Consensus 472 n~~g~~-~~~~~l~V---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~g~~~~~~~----~~~~~~~~ 541 (978)
+..+.. ...+.|.| ..+|.+...+....+.+|+.++|.|.+.+. | .+.|+|+|+|..+.... ......+.
T Consensus 115 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g 194 (237)
T 3sob_L 115 YTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDS 194 (237)
T ss_dssp SSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTC
T ss_pred cCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCC
Confidence 876532 23345666 345666665555556678899999999874 5 58999999999887421 01111222
Q ss_pred EEEecCEEEEEeCCCCCCCeEEEEEEEcCCCcee
Q psy12060 542 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 575 (978)
Q Consensus 542 ~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 575 (978)
.......|.|..... +|+|.|+|.|.|......
T Consensus 195 ~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 195 TYSLSSTLTLSKADY-EKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp CEEEEEEEEEEHHHH-TTCCEEEEEEECTTCSSC
T ss_pred cEEEEEEEEEcHHHc-cCCCcEEEEEeeCCCCCc
Confidence 222334688888875 899999999999876443
No 378
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.67 E-value=1.2e-16 Score=157.70 Aligned_cols=162 Identities=14% Similarity=0.195 Sum_probs=111.9
Q ss_pred CCCCCcEEEEEEEeecC---C-CeeEEEEcCccCCCCce-----ee----ecccEEEeCCCCCCCCeEEEEEEEeCCCce
Q psy12060 411 PKAGDKVRLECVAFGYP---V-PSYNWTRRGSPLPRNAY-----FE----NFNRILTIPNVKVEDQGEYICRASNDRSAL 477 (978)
Q Consensus 411 v~~G~~~~l~C~~~g~p---~-~~v~W~~~~~~l~~~~~-----~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 477 (978)
+.+|++++|.|.+.|.| . +.|+|+|++..+..... .. .....|.|.+++.+|+|.|+|.|.|..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 56899999999999874 2 48999999987653211 00 113479999999999999999999987753
Q ss_pred --EEEEEE--EEEeeceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCCCCC--CCCCCcEEEecCEE
Q psy12060 478 --ESSVTI--SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSETLP--LEDQDRYFIQDNVL 549 (978)
Q Consensus 478 --~~~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~--~~~~~~~~~~~~~l 549 (978)
+..+.+ .+..+|.+.+.+.......|+.++|.|.+.|. |. +.|+|+|||..+...... ....+........|
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l 174 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKL 174 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEE
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEE
Confidence 344444 55678887665444444469999999999985 54 499999999987532110 00111111122345
Q ss_pred EEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 550 TIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 550 ~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
.|..... +|.|.|+|.|.|....
T Consensus 175 ~i~~~~~-~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 175 NVQKSNW-EAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EEEHHHH-SSCCEEEEEEECTTSG
T ss_pred EECHHHc-CCCCEEEEEEECCCCC
Confidence 6665543 6899999999997653
No 379
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.67 E-value=4.6e-16 Score=161.45 Aligned_cols=196 Identities=16% Similarity=0.150 Sum_probs=120.8
Q ss_pred CeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccc--cccccc--cccCCCCCCceEee----cceEEEe
Q psy12060 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV--QDRLVA--NLIDPLSDKRFTLS----GGNLIIN 261 (978)
Q Consensus 190 P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~--~~~~~~--~~~~~~~~~~~~~~----~~~l~i~ 261 (978)
+.|+..|.+..+. +|++++|.|.+.+.|.+.|.|||++.. ...+.. .........|+... ..+|.|.
T Consensus 13 ~~v~~~p~~~~v~-----~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 87 (276)
T 3auv_A 13 IQMTQSPSSLSAS-----VGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTIS 87 (276)
T ss_dssp CCEEEECSEEECC-----TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEeCCCeEEEc-----CCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEc
Confidence 4566667766543 466799999999999999999997531 111100 00011123454432 2279999
Q ss_pred CCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeec-------------cc-ccCCCCeeeecccCeEEEeCCCCCCC-Cc
Q psy12060 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG-------------EF-NLKRAPEIGNQNWGKAMFCDPPTNYP-GV 326 (978)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~-------------~~-~~~~~~~~~~~~~~~~l~C~~~~~~p-~~ 326 (978)
++ +.+|+|.|+|.|.|..+...+..+.|.|...+ .+ ...+....+.+|+.++|.|.+....| .+
T Consensus 88 ~v-~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~ 166 (276)
T 3auv_A 88 SL-QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDY 166 (276)
T ss_dssp SC-CGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGS
T ss_pred cC-ChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCC
Confidence 97 89999999999999765433444566665432 11 11234556788999999999843332 58
Q ss_pred eEEEeccc--cccc---------------ccccceEEEeeC-----CcEEEeeeeeecceeeEEEEEeec---ccccccC
Q psy12060 327 NYYWARDY--FPNF---------------VEEDKRVFVSYD-----GALYFSALEQIDAGNYSCNVQSKV---SDTGRNG 381 (978)
Q Consensus 327 ~i~W~~~~--~~~~---------------~~~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~~~n~~---~~~~~~~ 381 (978)
.|.|+|++ .... .....++.+..+ .+|.|.+++.+|+|.|+|.|.|.. +.. .-.
T Consensus 167 ~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~-~fg 245 (276)
T 3auv_A 167 WIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMD-YWG 245 (276)
T ss_dssp EEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCC-CBC
T ss_pred EEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCce-EEC
Confidence 99999974 1110 011345555433 279999999999999999999973 111 111
Q ss_pred CceeEEEccCC
Q psy12060 382 PFFPLKVFPHS 392 (978)
Q Consensus 382 ~~~~l~V~~~~ 392 (978)
.-..|.|...+
T Consensus 246 ~gt~l~V~~~~ 256 (276)
T 3auv_A 246 QGTLVTVSSAS 256 (276)
T ss_dssp CCEEEEEC---
T ss_pred CCEEEEEcccc
Confidence 22577776543
No 380
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.67 E-value=5.3e-17 Score=161.68 Aligned_cols=161 Identities=14% Similarity=0.230 Sum_probs=110.6
Q ss_pred CCCCCcEEEEEEEeec---CC-CeeEEEEcCccCCCCcee---------eecccEEEeCCCCCCCCeEEEEEEEeCCCce
Q psy12060 411 PKAGDKVRLECVAFGY---PV-PSYNWTRRGSPLPRNAYF---------ENFNRILTIPNVKVEDQGEYICRASNDRSAL 477 (978)
Q Consensus 411 v~~G~~~~l~C~~~g~---p~-~~v~W~~~~~~l~~~~~~---------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 477 (978)
+.+|++++|.|.+.|. |. +.|+|+|++..+...... ......|.|.+++.+|+|.|+|.|.|..+..
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 5689999999999987 33 699999999887543210 0123579999999999999999999987653
Q ss_pred --EEEEEE--EEEeeceeeccCCcccccCCCceeEEEEeec-CCCC-eeEEeECCEECCCCCCCC---CCCCcEEEecCE
Q psy12060 478 --ESSVTI--SIQAEPNFTIPLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELLNSETLPL---EDQDRYFIQDNV 548 (978)
Q Consensus 478 --~~~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~~~~~~~~~~---~~~~~~~~~~~~ 548 (978)
...+.+ .+..+|.+.+.+.......|+.++|.|.+.| .|.+ .|+|+|+|..+....... ...+.+. ....
T Consensus 103 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~-~~s~ 181 (218)
T 2rgs_A 103 PIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYF-IYSK 181 (218)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEE-EEEE
T ss_pred cceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEE-EEEE
Confidence 344332 4556787765444433446999999999998 5654 999999999875321100 1111121 2224
Q ss_pred EEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 549 LTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 549 l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
|.|..... +|.|.|+|.|.|....
T Consensus 182 l~v~~~~~-~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 182 LNMKTSKW-EKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEEEHHHH-HHCSCEEEEEECTTSG
T ss_pred EEECHHHc-CCCCeEEEEEEcCCCC
Confidence 55554432 4689999999997654
No 381
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.67 E-value=1.1e-15 Score=165.09 Aligned_cols=281 Identities=11% Similarity=0.025 Sum_probs=135.3
Q ss_pred EEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEE-cc--ccEEEEEEeeecC------CcCeEEEEeeCCEEccc
Q psy12060 654 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA-AH--RNLQLRCSAHTEE------LLDVAYIWTHNGVRIGN 724 (978)
Q Consensus 654 G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~-~g--~~~~l~C~~~~~p------~~~~~~~W~~~g~~~~~ 724 (978)
+.++..+.+..|.+..... .|. | .+|.++.+. .+ ..+.|+|...... ...+.+.|...+..-
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~v~--~----~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~-- 80 (380)
T 3lb6_C 10 CLYTFLISTTFGCTSSSDT-EIK--V----NPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSET-- 80 (380)
T ss_dssp ----------------------C--C----CCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSS--
T ss_pred hhhhheeecccccccCCcc-ccc--C----CcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCc--
Confidence 4455556666665432221 111 1 223344454 23 5699999875431 234455666544110
Q ss_pred cccccccCCeeecCCceEEEeccCCCCCEEEEEEEEc------CCCceeeeEEEEE-----cCCCCCCCceEEEEeeCCe
Q psy12060 725 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKS------TVGKISTKTTVIV-----EGPPGLPGGVQVVEVHKTS 793 (978)
Q Consensus 725 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n------~~G~~s~~~~l~v-----~~~P~~P~~~~~~~~~~~~ 793 (978)
....... .......+.+.....++.+|.| ..|..+....... ..||.+|.++.+.....++
T Consensus 81 -------w~~~~~~-~~~~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~ 152 (380)
T 3lb6_C 81 -------WKTIITK-NLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQY 152 (380)
T ss_dssp -------CEEEEES-SSEEEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTE
T ss_pred -------ceEEEec-cEEEEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcE
Confidence 0111111 1233344555556677777774 3444333232222 2456788999998888999
Q ss_pred eEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEe--eccCCCceeEEEEEEecCCccCCC
Q psy12060 794 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE--NVLVPWSTYEFKVIAGNELGYGEP 871 (978)
Q Consensus 794 v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~--~~L~p~~~Y~~~v~A~N~~G~g~~ 871 (978)
+.++|+++.+. +...+|.|+|+..+...+..+...... ........+. + +.+++.|.|+|.|.|..|.++.
T Consensus 153 l~csW~p~~~~-~~~~~Y~l~y~~~~~~~~~~C~~~~~~-----~g~~~~C~~~~~~-~~~~~~Y~i~V~a~n~~G~~~s 225 (380)
T 3lb6_C 153 LLCSWKPGIGV-LLDTNYNLFYWYEGLDHALQCVDYIKA-----DGQNIGCRFPYLE-ASDYKDFYICVNGSSENKPIRS 225 (380)
T ss_dssp EEEEEECC-------CCEEEEEECTTCSSCEECSEEEEC-------CEEEEECCCCT-TCSSSCEEEEEEEC-----CCC
T ss_pred EEEEEcCCCCC-CCCccEEEEEEECCCCccccCCCcccc-----CCceEEEEeCCCc-ccceeEEEEEEEEEcCCeeecc
Confidence 99999997754 356889999997665545444221100 0011123333 4 6889999999999999998765
Q ss_pred CCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEc
Q psy12060 872 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 951 (978)
Q Consensus 872 s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 951 (978)
+.. .+.+.+.+++.||.++++...+++++.|+|++|.. ..++.+.+|.|+|++. +..|...... + .+.|
T Consensus 226 ~~~--~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~-~~~~~~l~Yev~y~~~-~~~w~~~~~~---~----~~~l 294 (380)
T 3lb6_C 226 SYF--TFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLG-PIPARCFDYEIEIRED-DTTLVTATVE---N----ETYT 294 (380)
T ss_dssp EEE--EECGGGSCCCCCCEEEEEC-------CEEEECCSS-SCCSTTEEEEECC---------CCEES---S----SCC-
T ss_pred ccE--EEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCC-CCCcceEEEEEEEEeC-CCCceEeccc---c----eEEE
Confidence 432 46666667779999999988888899999999543 2346789999999985 4456543321 1 1447
Q ss_pred CC-CCceeeEEEEEEEecC
Q psy12060 952 PS-EFYYTEYEVKVQAIND 969 (978)
Q Consensus 952 ~~-L~p~t~Y~~~V~A~n~ 969 (978)
.+ |.|++.|.|+|+|...
T Consensus 295 ~~~L~p~t~Y~~qVRa~~~ 313 (380)
T 3lb6_C 295 LKTTNETRQLCFVVRSKVN 313 (380)
T ss_dssp -----------CCEEEEEC
T ss_pred eCccCCCcEEEEEEEEEEc
Confidence 78 9999999999999954
No 382
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.67 E-value=8.1e-16 Score=157.73 Aligned_cols=180 Identities=16% Similarity=0.164 Sum_probs=114.0
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEcc--cccccccc------cccCCCCCCceEee------cceEEEeCCCCCCCCe
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA------NLIDPLSDKRFTLS------GGNLIINDPRQVEDRG 270 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~--~~~~~~~~------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~G 270 (978)
.+|++++|.|.+.|.| .+.|.|||++ ..+..+.. .........|+.+. ..+|.|.++ +.+|+|
T Consensus 13 ~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~DsG 91 (257)
T 1f3r_B 13 RPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSL-QTDDTG 91 (257)
T ss_dssp CTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESC-CTTCCE
T ss_pred cCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCC-CcccCE
Confidence 3577799999999885 6899999974 22111100 00111123455543 238999998 899999
Q ss_pred EEEEEEEeCce--------eEEeEEEEEEEeeec---------------ccccCCCCeeeecccCeEEEeCCCCCCCCce
Q psy12060 271 SYHCKASNKFG--------SIISESVQLAFGFIG---------------EFNLKRAPEIGNQNWGKAMFCDPPTNYPGVN 327 (978)
Q Consensus 271 ~Y~C~a~n~~g--------~~~s~~~~l~v~~~~---------------~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~ 327 (978)
.|+|.|.|..| ...+..+.|.|...+ .+...+....+.+|+.++|.|.+ .+.|.+.
T Consensus 92 ~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~~~~ 170 (257)
T 1f3r_B 92 TYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKG-SQNINNY 170 (257)
T ss_dssp EEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEEC-SSCCBTC
T ss_pred EEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEE-CCcCCCc
Confidence 99999999854 122344567665432 11111223356789999999998 5667779
Q ss_pred EEEec--ccccccc----------cccceEEEee---CCcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccC
Q psy12060 328 YYWAR--DYFPNFV----------EEDKRVFVSY---DGALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPH 391 (978)
Q Consensus 328 i~W~~--~~~~~~~----------~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~ 391 (978)
+.|+| +|..+.. ....++.+.. ..+|.|.+++.+|+|.|+|.|.|.. . .-..-..|.|...
T Consensus 171 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~-~--~~g~gt~l~V~~~ 246 (257)
T 1f3r_B 171 LAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG-Y--TFGAGTKLELKAA 246 (257)
T ss_dssp EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS-E--EECCCCEECCSSS
T ss_pred EEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC-C--eECCCEEEEEeCC
Confidence 99999 5543210 0123444332 2369999999999999999999864 1 1112245666543
No 383
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.67 E-value=9.5e-16 Score=146.15 Aligned_cols=156 Identities=21% Similarity=0.289 Sum_probs=116.1
Q ss_pred cceeecCCCeEEEEEeecc--CCCCeeEEee--CCEEe----------cCCCcEEEeecCcEEEccccCCCCEEEEEEEE
Q psy12060 596 SETYAGEGGNVTIFCNPEA--APKPKFVWKK--DGNII----------GSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 661 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~--~p~~~i~W~~--~g~~~----------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 661 (978)
..+.+..|++++|.|.... .+.+.|.|++ ++..+ ....++.+..+++|.|.+++.+|+|.|+|.|.
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEE
Confidence 3456789999999995432 4466999999 88776 35678888889999999999999999999999
Q ss_pred eCCceeee--eEEEEEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCC
Q psy12060 662 NVHGMDES--KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 739 (978)
Q Consensus 662 n~~g~~~~--~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~ 739 (978)
|..|.... .+.|.|..+.. .+.+.. .+..++|.|.+.+.|. +.|.|+++|..+ .. +.
T Consensus 87 n~~g~~~~~~~~~L~V~~~~~-----~P~i~~-~~~~v~L~C~~~~~p~--~~~~W~~~g~~l-~~------------~~ 145 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQERVS-----KPKISW-TCINTTLTCEVMNGTD--PELNLYQDGKHL-KL------------SQ 145 (182)
T ss_dssp ETTSCEEEEEEEEEEEECCCC-----CCEEEE-ETTTTEEEEECSSCSS--CEEEEEESSCEE-EE------------ES
T ss_pred eCCCceeEEEEEEEEEcCcCC-----CCEEEE-ccCcEEEEeEccCCCC--CEEEEEECCEEC-CC------------CC
Confidence 98887643 45677765321 122222 3447999999998874 467999999877 21 12
Q ss_pred ceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy12060 740 GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 773 (978)
Q Consensus 740 ~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~ 773 (978)
..|.+.. ...|+|.|+|.|.|.+|..++...+.
T Consensus 146 ~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 146 RVITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp SCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred cEEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 2344433 47899999999999999888776553
No 384
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.67 E-value=7.9e-15 Score=139.98 Aligned_cols=231 Identities=19% Similarity=0.366 Sum_probs=154.5
Q ss_pred CCCCCCcEEEEEEEee-cCC---CeeEEEEcCccCCCCceeeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFG-YPV---PSYNWTRRGSPLPRNAYFENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTISI 485 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g-~p~---~~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 485 (978)
.+..|+.++|+|.+.| .|. -+|+|+|++.++... ...|.|..+...|+|.|+|.+.+..|....+..+.|
T Consensus 13 ~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa------T~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtV 86 (304)
T 3shs_A 13 CFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN------TATLTVADATSENAGSYKVTVQDTDTMTSVESEVFL 86 (304)
T ss_dssp SBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC------SSEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEE
T ss_pred cccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC------cceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEE
Confidence 4568999999999874 563 379999999887643 358999999999999999999998876554444444
Q ss_pred Eeec--eeec-cCCcccccCCCceeEEEEe--ec-CC-----CCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeC
Q psy12060 486 QAEP--NFTI-PLTDKHMDNQADLTWTCEA--FG-VP-----DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL 554 (978)
Q Consensus 486 ~~~p--~~~~-~~~~~~~~~g~~~~l~C~~--~~-~p-----~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 554 (978)
..++ .+.. .+....+..|..+.|.+.+ .| .| ..+++|+|++..+... ..|++...
T Consensus 87 T~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA--------------q~lT~sS~ 152 (304)
T 3shs_A 87 MEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT--------------QDITIQEF 152 (304)
T ss_dssp ECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS--------------SEEEECSC
T ss_pred eccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc--------------cccceeeE
Confidence 4433 3322 3444456678899999987 43 34 4699999999877521 24555555
Q ss_pred CCCCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeec--------cCCCC--eeEEe-
Q psy12060 555 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE--------AAPKP--KFVWK- 623 (978)
Q Consensus 555 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~--------~~p~~--~i~W~- 623 (978)
.. .++|.|+|.+.|..+.-..+....+....-.+..... ....+..|+.+.|.-.+. |.|.. .+.|+
T Consensus 153 Ta-teaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (304)
T 3shs_A 153 TA-DKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVV-ESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYL 230 (304)
T ss_dssp CG-GGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCC-SEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEEEEE
T ss_pred Ee-cCCeEEEEEEEcCCCCcccccceEEEEEccccchhhe-EeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEEEEE
Confidence 54 7999999999998764433333333221111111111 223467899998876542 33322 45687
Q ss_pred -eCCEE----ecC-----CCcEEEeecCcEEEccccCCCCEEEEEEEEe
Q psy12060 624 -KDGNI----IGS-----GGRRKIFENGNLLISPVSRDDSGIYSCTATN 662 (978)
Q Consensus 624 -~~g~~----~~~-----~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 662 (978)
|.|+. +.. -..+.+..+|.|.-.....+|...|.|.|.-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (304)
T 3shs_A 231 QREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKL 279 (304)
T ss_dssp ECTTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEEE
T ss_pred eecCccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHHH
Confidence 34432 111 1345667788898889999999999999853
No 385
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.67 E-value=1.1e-16 Score=160.18 Aligned_cols=168 Identities=13% Similarity=0.158 Sum_probs=104.5
Q ss_pred cccCcEEEEEEeecC-CCCeEEEEEccc--cccccccc------ccCCCCCCceEe----ecceEEEeCCCCCCCCeEEE
Q psy12060 207 SILNDITLSCYAGGY-PNPSYEWFKEDY--VQDRLVAN------LIDPLSDKRFTL----SGGNLIINDPRQVEDRGSYH 273 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~-p~~~v~W~~~~~--~~~~~~~~------~~~~~~~~~~~~----~~~~l~i~~~~~~~d~G~Y~ 273 (978)
.+|++++|.|.+.+. |.+.|.|||.+. ....+... ........|+.+ .+.+|.|.++ +.+|+|.|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v-~~~D~G~Y~ 91 (218)
T 3s96_B 13 SLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNI-QPEDEAIYI 91 (218)
T ss_dssp ETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSC-CGGGCEEEE
T ss_pred CCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccC-CcccCEEEE
Confidence 346779999999998 899999999531 11000000 111112234443 2347999997 999999999
Q ss_pred EEEEeCce----eEEeEEEEEEEee----ecccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccccccccccce
Q psy12060 274 CKASNKFG----SIISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEEDKR 344 (978)
Q Consensus 274 C~a~n~~g----~~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~~~~~ 344 (978)
|.|.|..| ...+..+.|.|.. +|.+...........++.++|.|.+.++.|++ .|+|+|+|.++.......
T Consensus 92 C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 171 (218)
T 3s96_B 92 CGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTS 171 (218)
T ss_dssp EEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC-------
T ss_pred EEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecC
Confidence 99999876 2334456777763 22222222223334567789999996546776 999999998754311111
Q ss_pred EEEeeC------CcEEEeeeeeecceeeEEEEEeecc
Q psy12060 345 VFVSYD------GALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 345 ~~~~~~------~~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
.....+ +.|.|.....+|+|.|+|.|.|..+
T Consensus 172 ~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 208 (218)
T 3s96_B 172 NPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGD 208 (218)
T ss_dssp -------CEEEEEEEEEEHHHHHTCSCEEEEEEETTE
T ss_pred cccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCC
Confidence 111112 2377777888889999999999764
No 386
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.67 E-value=5.2e-15 Score=153.87 Aligned_cols=245 Identities=13% Similarity=0.123 Sum_probs=144.7
Q ss_pred ecCCCeEEEEEeeccCCCCeeEEeeCCEEecCCCcEEEeecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEeCC
Q psy12060 600 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 679 (978)
Q Consensus 600 ~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 679 (978)
+..|++++|.|.+...+ .|.|+++|..... ..+++|.|.++...|+|.|+|.| .|.....+.|.|..++
T Consensus 18 ~~~G~~v~l~C~~~~~~--~i~W~~~~~~~~~------~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~~~~ 86 (306)
T 3d85_D 18 DAPGEMVVLTCDTPEED--GITWTLDQSSEVL------GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLHKKE 86 (306)
T ss_dssp SCCCEEEEEECSSSCCS--SCEEEETTCCCCC------EESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEEEEE
T ss_pred CccCCcEEEECCCCCCC--cCEEEECCccccC------CCCCEEEEEecCcCCCceEEEee---CCcccceEEEEEEecc
Confidence 45899999999987433 8999999875332 24678999999999999999999 3666666666665421
Q ss_pred ------ceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccc--ccccC-C-ee-----ecCCceEEE
Q psy12060 680 ------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL--NELET-P-NI-----NIDGGLLEI 744 (978)
Q Consensus 680 ------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~--~~~~~-~-~~-----~~~~~~l~i 744 (978)
.+....+ ... ....|.|.+...+. .++..|..++........ ..... . .. ......++|
T Consensus 87 ~~~~~t~i~~~~~----~pp-~~~~lsC~~~~~~~-~~~C~W~pg~~~~l~~~~~~~r~~~~~~~~~C~~~~~~~~~c~v 160 (306)
T 3d85_D 87 DGIWSTDILKDQK----EPK-NKTFLRCEAKNYSG-RFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRG 160 (306)
T ss_dssp TTEECCCSSCCCC--------CCCCCEEEBSSSSS-EEEEEEEESCCSSEEEEEEEEECSSSCEEEEECCCEEEEEEEC-
T ss_pred CCcceeeeecccC----CCC-CCCcceEEcCCccc-CcEEEecCCCCCceeEEEEEEecCCCCcceECCCCCCCccceee
Confidence 1100000 000 12345666554331 355566654431000000 00000 0 00 000011111
Q ss_pred ecc-----------------CCCCCEEEEEEEEcCCCceeeeEEEEE--cCCCCCCCceEEEEeeC-CeeEEEeecCCCC
Q psy12060 745 TNA-----------------SFADAGEYECVVKSTVGKISTKTTVIV--EGPPGLPGGVQVVEVHK-TSATIQWTDGATN 804 (978)
Q Consensus 745 ~~~-----------------~~~d~g~Y~c~a~n~~G~~s~~~~l~v--~~~P~~P~~~~~~~~~~-~~v~l~W~~p~~~ 804 (978)
... .......++|.|.|..|..+....+.+ ...|.||.++++..... ..+.|+|++|...
T Consensus 161 ~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~ 240 (306)
T 3d85_D 161 DNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTW 240 (306)
T ss_dssp -CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTS
T ss_pred cCccccceeeeeeccccccccccEEEEEEEEEEccCCccccceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCC
Confidence 111 012346678999999997666655544 46799999999877444 7999999999866
Q ss_pred CCCc----eeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEEEEEecCCccCCCCCCC
Q psy12060 805 GRPI----THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 875 (978)
Q Consensus 805 ~~~i----~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~ 875 (978)
+.+. +.|.|+|+..+...|..... ...+++. |.+++.|.|||+|.|..|.|..|+.+
T Consensus 241 ~~p~~~~~L~Y~vryr~~~~~~~~~~~~----------~~~ts~~----l~~~~~Y~vqVRa~~~~~~G~WSeWS 301 (306)
T 3d85_D 241 STPHSYFSLTFCVQVQGKSKREKKDRVF----------TDKTSAT----VICRKNASISVRAQDRYYSSSWSEWA 301 (306)
T ss_dssp CSCTTTSCEEEEEEEECC------CEEE----------ESSSEEE----ECCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred cCCCceeeEEEEEEEEECCCCccEEEee----------ccccEEE----EeCCCeEEEEEEeccCCCCCCCCCCC
Confidence 5544 79999999877655543211 1122332 56799999999999999999988865
No 387
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.67 E-value=2.4e-16 Score=149.41 Aligned_cols=144 Identities=17% Similarity=0.244 Sum_probs=105.5
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcCccCCC------------Cce--eeecccEEEeCCCCCCCCeEEEEEEEeCCC
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRGSPLPR------------NAY--FENFNRILTIPNVKVEDQGEYICRASNDRS 475 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~------------~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 475 (978)
.+.+|++|+|.|.+.+ |.+.|.|+|++..+.. ..+ ....+++|.|.+++.+|+|.|+|.|.|..|
T Consensus 6 ~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~ 84 (171)
T 1ccz_A 6 YGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITD 84 (171)
T ss_dssp EEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCCS
T ss_pred EEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCCC
Confidence 3468999999998854 7889999998764311 011 112457899999999999999999998877
Q ss_pred ceEEEEEEEEEeec---eeeccCCcccccCCCceeEEEEeecCCCCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEE
Q psy12060 476 ALESSVTISIQAEP---NFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIR 552 (978)
Q Consensus 476 ~~~~~~~l~V~~~p---~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~ 552 (978)
...+.|.|..++ .+..... ..+|.|.+.+.|.+.++|+++|..+... ....|.+.
T Consensus 85 --~~~~~L~V~~~~~~p~i~~~~~--------~~~L~C~~~~~p~p~i~W~~~~~~l~~~------------~~~~l~~~ 142 (171)
T 1ccz_A 85 --TMKFFLYVLEMVSKPMIYWECS--------NATLTCEVLEGTDVELKLYQGKEHLRSL------------RQKTMSYQ 142 (171)
T ss_dssp --CEEEEEEEECCCCCCEEEEETT--------TTEEEEECSSCSSCEEEEEETTEEEEEE------------SSSEEEEE
T ss_pred --cEEEEEEEECcCCCCEEEEecC--------CcEEEEEeCCCCCcEEEEEECCEECcCC------------cceEEEEe
Confidence 677888887653 3332211 1389999998899999999999987521 11234443
Q ss_pred eCCCCCCCeEEEEEEEcCCCceeeEEE
Q psy12060 553 YLNPERDPAMYQCRAKNQLKTRYSSAQ 579 (978)
Q Consensus 553 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 579 (978)
. ..|+|.|+|.|.|..+.......
T Consensus 143 ~---~~~~g~Y~C~a~N~~~~~~~~~~ 166 (171)
T 1ccz_A 143 W---TNLRAPFKCKAVNRVSQESEMEV 166 (171)
T ss_dssp C---SCCSSCEEEEEEETTEEEEEEEC
T ss_pred c---cCCCceEEEEEEcccCcccceeE
Confidence 2 37899999999999987665543
No 388
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.67 E-value=1.5e-16 Score=159.31 Aligned_cols=166 Identities=17% Similarity=0.299 Sum_probs=112.8
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC-------------------CCceee------ecccEEEeCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP-------------------RNAYFE------NFNRILTIPNVKV 460 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~-------------------~~~~~~------~~~~~L~i~~~~~ 460 (978)
.+.+|++++|.|.+.+.| .+.+.|+|++ ..+. ...++. ....+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 90 (222)
T 1q9r_B 11 LVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRA 90 (222)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred eEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCCc
Confidence 457999999999998765 6789999964 2110 011111 1134899999999
Q ss_pred CCCeEEEEEEEeCCC-----ceEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEEC
Q psy12060 461 EDQGEYICRASNDRS-----ALESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELL 529 (978)
Q Consensus 461 ~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~ 529 (978)
+|+|.|.|.+.+..+ .....+.|.|.. +|.+........+.+|+.++|.|.+.|. |.+ .|.|+++|..+
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 170 (222)
T 1q9r_B 91 EDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 170 (222)
T ss_dssp GGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred ccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCeEc
Confidence 999999999998754 222345666763 4555543333346789999999999985 877 99999998766
Q ss_pred CCCCCCC-CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEE
Q psy12060 530 NSETLPL-EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 578 (978)
Q Consensus 530 ~~~~~~~-~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~ 578 (978)
....... ...+ .....+.|.|..+.. +| |.|+|.|.|..+......
T Consensus 171 ~~~~~~~~~~~~-~~~~~s~L~i~~~~~-~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 171 GVHTFPAVLQSD-LYTLSSSVTVPSSTW-PS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp TEEEEEEEEETT-EEEEEEEEEEETTTT-TT-SCCEEEEEEGGGTEEEEE
T ss_pred ceEeccccccCC-cEEEEEEEEECchhc-CC-CeEEEEEEccCCCCcEEE
Confidence 4210000 0111 222234788888775 78 999999999888754443
No 389
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.67 E-value=1e-15 Score=156.30 Aligned_cols=179 Identities=20% Similarity=0.185 Sum_probs=113.3
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEccc--cccccccc-------ccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLVAN-------LIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~~--~~~~~~~~-------~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.|.| .+.|.|||++. ....+... ........|+.+. ..+|.|.++ +.+|+
T Consensus 15 ~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v-~~~D~ 93 (247)
T 2ghw_B 15 QPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL-RAEDT 93 (247)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC-CGGGC
T ss_pred ecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC-CHHHC
Confidence 3467799999999987 57899999642 11100000 0111123455442 237999998 89999
Q ss_pred eEEEEEEEeCcee-EEeEEEEEEEeeec-------------c--cccCCCCeeeecccCeEEEeCCCCCCCCceEEEec-
Q psy12060 270 GSYHCKASNKFGS-IISESVQLAFGFIG-------------E--FNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWAR- 332 (978)
Q Consensus 270 G~Y~C~a~n~~g~-~~s~~~~l~v~~~~-------------~--~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~- 332 (978)
|.|+|.|.|..+. ..+..+.|.|...+ . +...+....+.+|+.++|.|.+ .+.|++.|.|+|
T Consensus 94 G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~ 172 (247)
T 2ghw_B 94 AVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRA-SQSVRSNLAWYQQ 172 (247)
T ss_dssp EEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEE-SSCCTTCEEEEEE
T ss_pred EEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEe-CCCccceEEEEEE
Confidence 9999999998433 23344566665431 1 1112233457789999999998 566777999999
Q ss_pred -ccccccc----------cccceEEEeeC---CcEEEeeeeeecceeeEEEEEeecccccccCCceeEEEc
Q psy12060 333 -DYFPNFV----------EEDKRVFVSYD---GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVF 389 (978)
Q Consensus 333 -~~~~~~~----------~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~ 389 (978)
++..+.. ....++.+..+ ++|.|.+++.+|+|.|+|.|.|..... -..-..|.|.
T Consensus 173 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~--~g~~t~l~V~ 241 (247)
T 2ghw_B 173 KPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPT--FGQGTKVEVK 241 (247)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCE--ECCCEEEEEC
T ss_pred CCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCce--EcCCEEEEEC
Confidence 5543210 11234444322 359999999999999999998754222 1222566665
No 390
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.67 E-value=3.2e-16 Score=160.35 Aligned_cols=174 Identities=17% Similarity=0.274 Sum_probs=120.3
Q ss_pred CCCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC-----------------CCceee------ecccEEEeCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP-----------------RNAYFE------NFNRILTIPNVKVE 461 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~-----------------~~~~~~------~~~~~L~i~~~~~~ 461 (978)
..+.+|++++|.|.+.+.| .+.|.|+|++ ..+. ...++. ....+|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (256)
T 1nqb_A 10 ELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSE 89 (256)
T ss_dssp EEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChh
Confidence 3567999999999998875 6799999953 2210 011111 12358999999999
Q ss_pred CCeEEEEEEEeCCCc-----eEEEEEEEEEeeceeeccCCcccccCCCceeEEEEeecCCCC-----eeEEeE--CCEEC
Q psy12060 462 DQGEYICRASNDRSA-----LESSVTISIQAEPNFTIPLTDKHMDNQADLTWTCEAFGVPDV-----TYSWFR--NGELL 529 (978)
Q Consensus 462 d~G~Y~C~a~n~~g~-----~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~i~W~~--~g~~~ 529 (978)
|+|.|.|.|.|..|. ....+.|.|..+|.+...+....+.+|++++|.|.+.+.|.+ .+.|+| +|..+
T Consensus 90 DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 169 (256)
T 1nqb_A 90 DSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSP 169 (256)
T ss_dssp GCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCE
T ss_pred hCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCc
Confidence 999999999998652 223467888877877767777789999999999999988764 999999 56533
Q ss_pred CC-----CCCCCCCCCcEEEe----cCEEEEEeCCCCCCCeEEEEEEEcCCCcee-eEEEEEEE
Q psy12060 530 NS-----ETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLKTRY-SSAQLRVL 583 (978)
Q Consensus 530 ~~-----~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~ 583 (978)
.. .........++... ...|.|.++.. +|+|.|+|.|.+...... ....|.|.
T Consensus 170 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 170 KLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEA-EDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCCh-HHCEEEEEEEccCCceEECCCEEEEEE
Confidence 10 00000012344332 23799999997 999999999998543222 23355554
No 391
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.67 E-value=2e-16 Score=149.93 Aligned_cols=152 Identities=13% Similarity=0.120 Sum_probs=109.7
Q ss_pred eeeecccCeEEEeCCCCCCCCceEEEeccccccccc----------ccceEEEe-eCCcEEEeeeeeecceeeEEEEEee
Q psy12060 305 EIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVE----------EDKRVFVS-YDGALYFSALEQIDAGNYSCNVQSK 373 (978)
Q Consensus 305 ~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~----------~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n~ 373 (978)
..+.+|+.++|.|.+ .+ |.+.|.|+|++..+..- ...|+.+. .+++|.|.+++.+|+|.|+|.+.|.
T Consensus 5 v~~~~G~~VtL~c~~-~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPS-NV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEETTCCEEECCCC-SS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEcCCCEEEcCCC-CC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 356789999999987 33 78899999987542211 12344443 5689999999999999999999887
Q ss_pred cccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcCccCCCCceeeecccEE
Q psy12060 374 VSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRGSPLPRNAYFENFNRIL 453 (978)
Q Consensus 374 ~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~L 453 (978)
.+ ...+.|.|..++..+.+.... ...+|.|.+.+.|.|+|+|++++..+.... ...|
T Consensus 83 ~~-----~~~~~L~V~~~~~~p~i~~~~-------------~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~-----~~~l 139 (171)
T 1ccz_A 83 TD-----TMKFFLYVLEMVSKPMIYWEC-------------SNATLTCEVLEGTDVELKLYQGKEHLRSLR-----QKTM 139 (171)
T ss_dssp CS-----CEEEEEEEECCCCCCEEEEET-------------TTTEEEEECSSCSSCEEEEEETTEEEEEES-----SSEE
T ss_pred CC-----cEEEEEEEECcCCCCEEEEec-------------CCcEEEEEeCCCCCcEEEEEECCEECcCCc-----ceEE
Confidence 54 345788888765433322111 112799999998999999999998875322 2344
Q ss_pred EeCCCCCCCCeEEEEEEEeCCCceEEEEEE
Q psy12060 454 TIPNVKVEDQGEYICRASNDRSALESSVTI 483 (978)
Q Consensus 454 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 483 (978)
.+.+ ..|+|.|+|.|.|..+..+..+.|
T Consensus 140 ~~~~--~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 140 SYQW--TNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp EEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEec--cCCCceEEEEEEcccCcccceeEE
Confidence 4443 678999999999999887766554
No 392
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.66 E-value=2.2e-16 Score=156.62 Aligned_cols=163 Identities=16% Similarity=0.264 Sum_probs=110.5
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC----------------CCceee--e----cccEEEeCCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP----------------RNAYFE--N----FNRILTIPNVKVEDQ 463 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~----------------~~~~~~--~----~~~~L~i~~~~~~d~ 463 (978)
.+.+|++++|.|.+.+.| .+.|.|+|++ ..+. ...++. . ...+|.|.+++.+|+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 90 (210)
T 3d9a_H 11 LVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDT 90 (210)
T ss_dssp EECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcccC
Confidence 557999999999999865 4799999863 2210 011111 1 124899999999999
Q ss_pred eEEEEEEEeCCCceEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEECCCCCCC-C
Q psy12060 464 GEYICRASNDRSALESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSETLP-L 536 (978)
Q Consensus 464 G~Y~C~a~n~~g~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~~~~~~~-~ 536 (978)
|.|.|.+.|.. .....+.|.|.. +|.+...+....+..|+.++|.|.+.|. |.+ .|+|++++..+...... .
T Consensus 91 G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~ 169 (210)
T 3d9a_H 91 ATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAV 169 (210)
T ss_dssp EEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCE
T ss_pred EEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCc
Confidence 99999999863 222234666653 4555544433457899999999999987 877 99999998764311000 0
Q ss_pred CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceee
Q psy12060 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576 (978)
Q Consensus 537 ~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 576 (978)
...+. ......|.|..+.. +| |.|+|.|.|..+....
T Consensus 170 ~~~~~-~~~~s~L~i~~~~~-~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 170 LQSDL-YTLSSSVTVPSSTW-PS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp EETTE-EEEEEEEEEEGGGT-TT-SCCEEEEEEGGGTEEE
T ss_pred cCCCc-EEEEEEEEEcHHHc-CC-CcEEEEEEeCCCCccc
Confidence 01122 22334688988875 56 9999999998876543
No 393
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.66 E-value=8.8e-16 Score=157.17 Aligned_cols=192 Identities=16% Similarity=0.131 Sum_probs=119.7
Q ss_pred EeCCCceEecCCCccccCcEEEEEEeecCC--CCeEEEEEcc--cccccccc-------cccCCCCCCceEee------c
Q psy12060 193 IKQPTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------G 255 (978)
Q Consensus 193 ~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~v~W~~~~--~~~~~~~~-------~~~~~~~~~~~~~~------~ 255 (978)
+..|.+..+. +|++++|.|.+.|.+ .+.+.|||.. ..+..+.. .........|+.+. .
T Consensus 5 ~~~p~~~~v~-----~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 79 (253)
T 3uzq_A 5 LEQSGAELVK-----PGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNT 79 (253)
T ss_dssp EEECCCEEEC-----TTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTE
T ss_pred EecCCCeeec-----CCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCe
Confidence 3445555543 466799999999854 6899999932 21111100 00111122344432 1
Q ss_pred ceEEEeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeee---------------cccccCCCCeeeecccCeEEEeCCC
Q psy12060 256 GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFI---------------GEFNLKRAPEIGNQNWGKAMFCDPP 320 (978)
Q Consensus 256 ~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~---------------~~~~~~~~~~~~~~~~~~~l~C~~~ 320 (978)
.+|.|.++ +.+|+|.|+|.|.|..+...+..+.|.|... +.+...+....+.+|+.++|.|.+.
T Consensus 80 ~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 158 (253)
T 3uzq_A 80 AYLHLSSL-TSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRAS 158 (253)
T ss_dssp EEEEECSC-CGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEES
T ss_pred EEEEeCCC-CcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEec
Confidence 24999998 9999999999999977665556667776632 2222233446778899999999984
Q ss_pred CCCCCc----eEEEeccc--cccc-c---------cccceEEEeeC---CcEEEeeeeeecceeeEEEEEeecccccccC
Q psy12060 321 TNYPGV----NYYWARDY--FPNF-V---------EEDKRVFVSYD---GALYFSALEQIDAGNYSCNVQSKVSDTGRNG 381 (978)
Q Consensus 321 ~~~p~~----~i~W~~~~--~~~~-~---------~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 381 (978)
+.|.+ .+.|+|++ .... + ....++..... .+|.|.+++.+|+|.|+|.|.|...... .
T Consensus 159 -~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~f--g 235 (253)
T 3uzq_A 159 -ENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTF--G 235 (253)
T ss_dssp -SCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCB--C
T ss_pred -CccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEE--C
Confidence 45555 89999953 2211 0 01133333322 2599999999999999999998653222 2
Q ss_pred CceeEEEccCCC
Q psy12060 382 PFFPLKVFPHSN 393 (978)
Q Consensus 382 ~~~~l~V~~~~~ 393 (978)
.-..|.|...++
T Consensus 236 ~gt~l~v~~~~~ 247 (253)
T 3uzq_A 236 GGTKLEIKRPLE 247 (253)
T ss_dssp CCEEEEECCC--
T ss_pred CCEEEEEcCCCC
Confidence 236788876554
No 394
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.66 E-value=6.2e-17 Score=163.72 Aligned_cols=163 Identities=18% Similarity=0.285 Sum_probs=94.4
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcCc--cC------------CCCcee----eecccEEEeCCCCCCCCeEEEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRGS--PL------------PRNAYF----ENFNRILTIPNVKVEDQGEYICRA 470 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~~--~l------------~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a 470 (978)
..+.+|++++|.|.+.+.|.+.|.|+|++. .+ ....++ .....+|.|.+++.+|+|.|.|.+
T Consensus 33 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 112 (233)
T 3bqu_C 33 LSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQ 112 (233)
T ss_dssp C-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEEE
T ss_pred EEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEEE
Confidence 356799999999999998888999999642 11 001111 112347999999999999999999
Q ss_pred EeCCCce-EEEEEEEEEe---eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEECCCC-C---CCCCCCC
Q psy12060 471 SNDRSAL-ESSVTISIQA---EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSE-T---LPLEDQD 540 (978)
Q Consensus 471 ~n~~g~~-~~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~~~~-~---~~~~~~~ 540 (978)
.|..+.. ...+.|.|.. +|.+...+......+|++++|.|.+.|. |.+ .|+|+|+|..+... . ......+
T Consensus 113 ~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~ 192 (233)
T 3bqu_C 113 SDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKD 192 (233)
T ss_dssp CSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTT
T ss_pred ecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCC
Confidence 9876532 2234566654 5666664444445579999999999985 443 79999999887643 0 0011112
Q ss_pred cEEEecCEEEEEeCCCCCCCeEEEEEEEcCCC
Q psy12060 541 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 572 (978)
Q Consensus 541 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g 572 (978)
........|.|..+.. +|+|.|+|.|.|...
T Consensus 193 ~~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 193 STYSMSSTLTLTKDEY-ERHNSYTCEATHKTS 223 (233)
T ss_dssp CCEEEEEEEEEEHHHH-HTCCCEEEEEEEC--
T ss_pred CCEEEEEEEEECHHHh-CCCCCEEEEEEeCCC
Confidence 2222334788888875 899999999999654
No 395
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=1.4e-16 Score=161.35 Aligned_cols=165 Identities=17% Similarity=0.325 Sum_probs=111.8
Q ss_pred CCCCCCCcEEEEEEEeecC-CC-eeEEEEcC--ccC----------C--CCceee----ecccEEEeCCCCCCCCeEEEE
Q psy12060 409 EAPKAGDKVRLECVAFGYP-VP-SYNWTRRG--SPL----------P--RNAYFE----NFNRILTIPNVKVEDQGEYIC 468 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p-~~-~v~W~~~~--~~l----------~--~~~~~~----~~~~~L~i~~~~~~d~G~Y~C 468 (978)
..+.+|++++|.|.+.+.+ .+ .|.|+|++ ..+ . ...++. ....+|.|.+++.+|+|.|+|
T Consensus 29 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 108 (234)
T 2j6e_L 29 ASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC 108 (234)
T ss_dssp CCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEE
T ss_pred EEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEE
Confidence 4567999999999998754 34 79999974 221 0 011121 123489999999999999999
Q ss_pred EEEeCCCc---eEEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCCCC---CC
Q psy12060 469 RASNDRSA---LESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSETL---PL 536 (978)
Q Consensus 469 ~a~n~~g~---~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~---~~ 536 (978)
.|.|..+. ....+.|.|. .+|.+...+.......|++++|.|.+.|. |. +.|+|+|||..+..... ..
T Consensus 109 ~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~ 188 (234)
T 2j6e_L 109 ATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPS 188 (234)
T ss_dssp EEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCC
T ss_pred EEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCce
Confidence 99998773 2234566663 35555543333344568999999999985 43 48999999998864310 00
Q ss_pred CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCce
Q psy12060 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574 (978)
Q Consensus 537 ~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~ 574 (978)
...+........|.|..+.. +|+|.|+|.|.|.....
T Consensus 189 ~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~~~ 225 (234)
T 2j6e_L 189 KQSNNKYAASSYLSLTPEQW-KSHRSYSCQVTHEGSTV 225 (234)
T ss_dssp CCTTSCCBCCEEECCCGGGT-TTSCCEEEEEEBTTBCC
T ss_pred ECCCCCEEEEEEEEECHHHc-CCCCeEEEEEEeCCCce
Confidence 01111112234688888875 89999999999987653
No 396
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.66 E-value=7.8e-16 Score=156.21 Aligned_cols=175 Identities=18% Similarity=0.186 Sum_probs=113.0
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEccc--cccccccc--ccCCCCCCceEee----cceEEEeCC
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLVAN--LIDPLSDKRFTLS----GGNLIINDP 263 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~--~~~~~~~~--~~~~~~~~~~~~~----~~~l~i~~~ 263 (978)
|+..|.+..+. +|++++|.|.+.+.|.+.+.|||++. ....+... ........|+... ..+|.|.++
T Consensus 4 v~~~p~~~~v~-----~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 78 (242)
T 2znx_A 4 LTQSPATLSVT-----PGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSV 78 (242)
T ss_dssp EEEECSEEEEC-----TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSC
T ss_pred EEEcCCeEEEc-----CCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCC
Confidence 45556666654 46679999999999999999999642 11100000 0011123454432 237999997
Q ss_pred CCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecc-------------cccCCCCeeeecccCeEEEeCCCCCCC--CceE
Q psy12060 264 RQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE-------------FNLKRAPEIGNQNWGKAMFCDPPTNYP--GVNY 328 (978)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~-------------~~~~~~~~~~~~~~~~~l~C~~~~~~p--~~~i 328 (978)
+.+|+|.|+|.|.|..+...+..+.|.|..++. ....+....+.+|+.++|.|.+. +.| .+.+
T Consensus 79 -~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-g~~~~~~~v 156 (242)
T 2znx_A 79 -ETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVT-GDSITSDYX 156 (242)
T ss_dssp -CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEE-SSCGGGSCE
T ss_pred -ChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEE-ccccCCcce
Confidence 899999999999998655444556677765432 11222334678899999999984 444 5789
Q ss_pred EEeccc--cccc--c------------cccceEEEeeC-----CcEEEeeeeeecceeeEEEEEee
Q psy12060 329 YWARDY--FPNF--V------------EEDKRVFVSYD-----GALYFSALEQIDAGNYSCNVQSK 373 (978)
Q Consensus 329 ~W~~~~--~~~~--~------------~~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~~~n~ 373 (978)
.|+|++ .... . ....++.+..+ ++|.|.+++.+|+|.|+|.|.|.
T Consensus 157 ~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 157 SXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred eeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 999953 2210 0 01345555432 37999999999999999999863
No 397
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.66 E-value=2.6e-15 Score=144.07 Aligned_cols=162 Identities=11% Similarity=0.115 Sum_probs=115.4
Q ss_pred cceeecCCCeEEEEEeeccCCCC--eeEEeeCCEEecCCCcEEE-eecCcEEEccccCCCCEEEEEEEEeCCceeeeeEE
Q psy12060 596 SETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 672 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~g~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 672 (978)
..+.+..|++++|.|.+ +.|.| .|.|.+.+..+ .+... .....|.|.+++.+|+|.|.|.|.|..+.....+.
T Consensus 15 ~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 15 PVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp SEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 33568899999999999 88878 99999865443 22222 22346999999999999999999999998888899
Q ss_pred EEEEeCCceeeeCCCceEEEccccEEEEEEeeec-CCc--CeEEEEeeCCEEcccccccc-cc----------CCeeecC
Q psy12060 673 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELL--DVAYIWTHNGVRIGNMDLNE-LE----------TPNINID 738 (978)
Q Consensus 673 l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~--~~~~~W~~~g~~~~~~~~~~-~~----------~~~~~~~ 738 (978)
|.|..+|..+...+. ....|+.+ |.|.+.+. |.+ .++|.|+|++.++....... .. ......-
T Consensus 91 ltV~~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~v 167 (210)
T 1gsm_A 91 LLVYAFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRV 167 (210)
T ss_dssp EEEEBCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEE
T ss_pred EEEEecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEE
Confidence 999998876654433 55677888 99999987 544 58899999999986432100 00 0000000
Q ss_pred CceEEEeccCCCCCEEEEEEEEcCCC
Q psy12060 739 GGLLEITNASFADAGEYECVVKSTVG 764 (978)
Q Consensus 739 ~~~l~i~~~~~~d~g~Y~c~a~n~~G 764 (978)
.+++.+......+.+.|+|+|.+..-
T Consensus 168 ts~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 168 TERWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp EEEEECCCCCSSCCSEEEEEEEEEET
T ss_pred EEEEeecCCcccCCceEEEEEEeeCC
Confidence 12333445555666899999988754
No 398
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.65 E-value=4.8e-16 Score=157.71 Aligned_cols=160 Identities=17% Similarity=0.211 Sum_probs=109.8
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcC--cc-----------------CCCCceee---ecccEEEeCCCCCCCCeEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRG--SP-----------------LPRNAYFE---NFNRILTIPNVKVEDQGEYI 467 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~-----------------l~~~~~~~---~~~~~L~i~~~~~~d~G~Y~ 467 (978)
.+.+|++++|.|. .+.|.+.|.|+|++ .. +....... ....+|.|.+++.+|+|.|+
T Consensus 11 ~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 89 (238)
T 2p1y_A 11 VAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYF 89 (238)
T ss_dssp EEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEEE
T ss_pred EEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeEE
Confidence 4579999999999 78888999999962 11 11111111 12458999999999999999
Q ss_pred EEEEeCCCce-----EEEEEEEEEeec------------eeeccCCcccccCCCceeEEEEeecCCCCeeEEeECC--EE
Q psy12060 468 CRASNDRSAL-----ESSVTISIQAEP------------NFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNG--EL 528 (978)
Q Consensus 468 C~a~n~~g~~-----~~~~~l~V~~~p------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g--~~ 528 (978)
|.|.|..|.. ...+.|.|...+ .+...+....+.+|++++|.|.+.+.|.+.+.|+|++ ..
T Consensus 90 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~ 169 (238)
T 2p1y_A 90 CASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEG 169 (238)
T ss_dssp EEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSC
T ss_pred EEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCC
Confidence 9999976521 123567776543 4455566677899999999999999889999999964 11
Q ss_pred CC---C--CCCCCCCCCcEEEe------cCEEEEEeCCCCCCCeEEEEEEEcCC
Q psy12060 529 LN---S--ETLPLEDQDRYFIQ------DNVLTIRYLNPERDPAMYQCRAKNQL 571 (978)
Q Consensus 529 ~~---~--~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~G~Y~C~a~n~~ 571 (978)
+. . .........++.+. ...|.|.++.. +|+|.|+|.|.|..
T Consensus 170 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 170 PALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP-GDSATYFCAAIDTN 222 (238)
T ss_dssp CEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCG-GGCEEEEEEEEETT
T ss_pred CEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCH-HHCEEEEEEEeeCC
Confidence 10 0 00000122344443 24799999996 99999999999974
No 399
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.65 E-value=2.4e-16 Score=163.20 Aligned_cols=196 Identities=18% Similarity=0.295 Sum_probs=110.6
Q ss_pred eeeecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEEEEEEEeecCCCeeEEEEcC
Q psy12060 358 LEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVRLECVAFGYPVPSYNWTRRG 437 (978)
Q Consensus 358 ~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~v~W~~~~ 437 (978)
..++|.+.|.|.+.+..+..+.. ..+.|..+|. ...+.+|++++|.|.+.+ +.+.|.|+|..
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~---~~~~v~~~p~--------------~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~ 64 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGG---GGMKVIQTPR--------------YLVKGQGQKAKMRCIPEK-GHPVVFWYQQN 64 (270)
T ss_dssp ----------------------------CCCEEECS--------------EEEEETTSCEEEEEECCT-TCCEEEEEEEC
T ss_pred chhhhHHHHHHHHhccCCccccc---cceeEEeCCC--------------eEEEcCCCCEEEEEEecC-CCceEEEEEEC
Confidence 35789999999999887643322 1122222121 134579999999999865 67799999932
Q ss_pred cc--CC------CCc----------eee-----ecccEEEeCCCCCCCCeEEEEEEEeCCC----ceEEEEEEEEEe---
Q psy12060 438 SP--LP------RNA----------YFE-----NFNRILTIPNVKVEDQGEYICRASNDRS----ALESSVTISIQA--- 487 (978)
Q Consensus 438 ~~--l~------~~~----------~~~-----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~--- 487 (978)
.. .. ... ++. ..+.+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~ 144 (270)
T 3qib_D 65 KNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLK 144 (270)
T ss_dssp TTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCST
T ss_pred CCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccc
Confidence 11 00 000 111 1245899999999999999999997432 222345677776
Q ss_pred ---eceeec-cCCcccccCCCceeEEEEeec-CCCC-eeEEeECCEECCCCCCC---------CCCCCcEEEecCEEEEE
Q psy12060 488 ---EPNFTI-PLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELLNSETLP---------LEDQDRYFIQDNVLTIR 552 (978)
Q Consensus 488 ---~p~~~~-~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~~~~~~~~~---------~~~~~~~~~~~~~l~i~ 552 (978)
+|.+.+ .+....+..|+.++|.|.+.+ .|.+ .+.|+|+|..+...... ......+. ....|.|.
T Consensus 145 ~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~-~~s~L~i~ 223 (270)
T 3qib_D 145 NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYA-LSSRLRVS 223 (270)
T ss_dssp TCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEE-EEEEEEEE
T ss_pred cccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEE-EEEEEEEc
Confidence 565543 344445667999999999998 5655 89999999998643110 00122232 23467787
Q ss_pred eCCCCCC-CeEEEEEEEcCCCc
Q psy12060 553 YLNPERD-PAMYQCRAKNQLKT 573 (978)
Q Consensus 553 ~~~~~~d-~G~Y~C~a~n~~g~ 573 (978)
.... +| +|.|+|.+.|....
T Consensus 224 ~~~~-~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 224 ATFW-QNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp HHHH-HSTTCEEEEEEEECCBC
T ss_pred HHHh-ccCCCeEEEEEEecCCC
Confidence 7654 55 99999999987543
No 400
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.65 E-value=1.2e-15 Score=145.85 Aligned_cols=152 Identities=14% Similarity=0.145 Sum_probs=102.7
Q ss_pred cccCcEEEEEEeec-CCCCeEEEEEc-cccccccccc----ccCCCCCCceEe--ecceEEEeCCCCCCCCeEEEEEEEe
Q psy12060 207 SILNDITLSCYAGG-YPNPSYEWFKE-DYVQDRLVAN----LIDPLSDKRFTL--SGGNLIINDPRQVEDRGSYHCKASN 278 (978)
Q Consensus 207 ~~g~~~~l~C~~~g-~p~~~v~W~~~-~~~~~~~~~~----~~~~~~~~~~~~--~~~~l~i~~~~~~~d~G~Y~C~a~n 278 (978)
.+|++|+|.|.+.+ .+.+.|.|+|+ +..+...... ...+....|+.+ .+++|.|.++ +.+|+|.|+|.+.+
T Consensus 12 ~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v-~~~D~G~Y~C~v~~ 90 (180)
T 2dru_A 12 ITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNV-SKEDRGDYYMRMLH 90 (180)
T ss_dssp ETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSC-CGGGCEEEEEEEES
T ss_pred EeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCC-CHHHCeEEEEEEEc
Confidence 35778999999864 34689999995 3332211100 111222356665 5679999998 89999999999987
Q ss_pred CceeEEeEEEEEEEeeecccccCCCCeeeecccCeEEEeCCCCCCCCceEEEecccccccccccceEEEeeCCcEEEeee
Q psy12060 279 KFGSIISESVQLAFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYWARDYFPNFVEEDKRVFVSYDGALYFSAL 358 (978)
Q Consensus 279 ~~g~~~s~~~~l~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 358 (978)
.. ..+..+.|.|..++. .+.....+..++|.|.+..+ |.+.|+|+|++.++. ...+.+|.+..
T Consensus 91 ~~--~~~~~~~L~V~~~~~-----~P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~--------~~~~~~l~~~~- 153 (180)
T 2dru_A 91 ET--EDQWKITMEVYEMVS-----KPMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLR--------SLRQKTMSYQW- 153 (180)
T ss_dssp SS--EEEEEEEEEEECCCC-----CCEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEE--------EESSSEEEEEC-
T ss_pred CC--eEEEEEEEEEECCCC-----CCEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECc--------CCCCCEEEEEE-
Confidence 65 345567777754321 22233345669999999666 899999999987642 12234566522
Q ss_pred eeecceeeEEEEEeecccc
Q psy12060 359 EQIDAGNYSCNVQSKVSDT 377 (978)
Q Consensus 359 ~~~d~G~Y~C~~~n~~~~~ 377 (978)
.+|+|.|+|.|.|..+..
T Consensus 154 -~~d~g~Y~C~a~N~~~~~ 171 (180)
T 2dru_A 154 -TNLRAPFKCKAVNRVSQE 171 (180)
T ss_dssp -SCCSSCEEEEEEETTEEE
T ss_pred -hhcCccEEEEEecCcCcc
Confidence 789999999999987543
No 401
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=6e-16 Score=157.98 Aligned_cols=162 Identities=21% Similarity=0.390 Sum_probs=112.0
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcCc--cC-----------------CCCceee------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRGS--PL-----------------PRNAYFE------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~~--~l-----------------~~~~~~~------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.|.| .+.|.|+|++. .+ ....++. ....+|.|.+++.+|
T Consensus 13 ~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 92 (247)
T 2ghw_B 13 VVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAED 92 (247)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHHH
Confidence 557999999999999877 57899999531 11 0011111 123479999999999
Q ss_pred CeEEEEEEEeCCCc--eEEEEEEEEEee---------------ceeeccCCcccccCCCceeEEEEeecCCCCeeEEeE-
Q psy12060 463 QGEYICRASNDRSA--LESSVTISIQAE---------------PNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFR- 524 (978)
Q Consensus 463 ~G~Y~C~a~n~~g~--~~~~~~l~V~~~---------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~- 524 (978)
+|.|+|.|.|..+. ....+.|.|..+ +.+...+....+.+|++++|.|.+.+.|.+.+.|+|
T Consensus 93 ~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 172 (247)
T 2ghw_B 93 TAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQ 172 (247)
T ss_dssp CEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred CEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEE
Confidence 99999999997322 223356777653 334445666678999999999999998888999999
Q ss_pred -CCEECCC-----CCCCCCCCCcEEEe----cCEEEEEeCCCCCCCeEEEEEEEcCCC
Q psy12060 525 -NGELLNS-----ETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLK 572 (978)
Q Consensus 525 -~g~~~~~-----~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y~C~a~n~~g 572 (978)
+|..+.. .........++.+. ...|.|.++.. +|+|.|+|.|.|...
T Consensus 173 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~~~~~ 229 (247)
T 2ghw_B 173 KPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEP-EDFAVYYCQQRSNWP 229 (247)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCG-GGCEEEEEEECSSSS
T ss_pred CCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCH-HHCEEEEEEEccCCC
Confidence 5554310 00000112344332 23699999997 999999999998643
No 402
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.65 E-value=1.5e-15 Score=150.81 Aligned_cols=171 Identities=18% Similarity=0.239 Sum_probs=116.0
Q ss_pred cceeecCCCeEEEEEeeccCC---CCeeEEeeC--CEEe------------cCCCcEEEeecC---cEEEccccCCCCEE
Q psy12060 596 SETYAGEGGNVTIFCNPEAAP---KPKFVWKKD--GNII------------GSGGRRKIFENG---NLLISPVSRDDSGI 655 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p---~~~i~W~~~--g~~~------------~~~~~~~~~~~~---~l~i~~~~~~d~G~ 655 (978)
....+.+|++++|.|.+.+.| .+.+.|+++ +..+ ....++.+...+ +|.|.+++.+|+|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 87 (212)
T 1q0x_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAI 87 (212)
T ss_dssp SEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEE
Confidence 344578999999999999887 478999985 2222 112455443332 69999999999999
Q ss_pred EEEEEEeCCceee-eeEEEEEEe----CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccc
Q psy12060 656 YSCTATNVHGMDE-SKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 730 (978)
Q Consensus 656 Y~C~a~n~~g~~~-~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~ 730 (978)
|+|.|.|..+... ....|.|.. +|.+.... +......|+.++|.|.+.+.+++.+.+.|+++|..+..... .
T Consensus 88 Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~-~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~--~ 164 (212)
T 1q0x_L 88 YFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFP-PSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGME--T 164 (212)
T ss_dssp EEEEEECSSCEEECCCEEEEECCSCCBCCEEEEEC-CCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE--E
T ss_pred EEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeC-CCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCee--c
Confidence 9999999876432 334566632 33332222 22223468899999999997766678899999998754210 0
Q ss_pred cCCeeecC-----CceEEEeccCCCCCEEEEEEEEcCCCceeee
Q psy12060 731 ETPNINID-----GGLLEITNASFADAGEYECVVKSTVGKISTK 769 (978)
Q Consensus 731 ~~~~~~~~-----~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~ 769 (978)
.......+ ...|.|.....+|+|.|+|.|.|.......+
T Consensus 165 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 165 TQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred CCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 00001111 2368899999999999999999987664444
No 403
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.65 E-value=3.8e-16 Score=156.07 Aligned_cols=187 Identities=17% Similarity=0.177 Sum_probs=122.5
Q ss_pred cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCC-ceeEEEEEeeccc----cCceEecccccceeeeecCCceeeEEeec
Q psy12060 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP-ITHYKIIARTNWN----STWFNVSEHVIGKEVDRYTGRKEASIENV 849 (978)
Q Consensus 775 ~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~-i~~Y~v~~~~~~~----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (978)
..||+.|.++.+......+++++|+++.++|.+ ...|.|.|+.... ..|..+...... ....-.+...+
T Consensus 27 ~~pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~-----~~~~C~~~~~~- 100 (236)
T 1axi_B 27 TNSSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSA-----GENSCYFNSSF- 100 (236)
T ss_dssp -----CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTT-----CTTEEEECGGG-
T ss_pred CCCCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCC-----CCEEEEECCcC-
Confidence 358999999988777889999999987665544 2589998876533 235554332211 11222344556
Q ss_pred cCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCcee--eccccc----CcEEEEEEeCCCC-CCCC-CcceE
Q psy12060 850 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG--GGGGKI----GDLSISWEPLPRE-KQNA-PNIYY 921 (978)
Q Consensus 850 L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~--~~~~~~----~si~v~W~~p~~~-~~~g-~i~~Y 921 (978)
|.+++.|.|+|.| | .+.+.+ . .+.....+.+.||.++. +...+. ..|.|+|++|... ..+| .++.|
T Consensus 101 l~~~~~Y~~~V~a-N-~~~s~~---~-~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Y 174 (236)
T 1axi_B 101 TSIAIPYCIKLTS-N-GGTVDE---K-CFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEY 174 (236)
T ss_dssp CCSSSEEEEEEEE-T-TEEEEE---E-EEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEE
T ss_pred CcccceEEEEEEE-C-CccCCC---e-EeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEE
Confidence 8999999999999 9 443332 2 33334455668899995 444433 3499999996543 3467 78999
Q ss_pred EEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecCCC--CCCCCCC
Q psy12060 922 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG--PGPESEV 978 (978)
Q Consensus 922 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G--~gp~S~~ 978 (978)
.|+|+..++..|...... .. ..+.|.+|.|++.|.|+|||.+.+| -|++|++
T Consensus 175 evry~~~~~~~w~~~~~~---~~--~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~ 228 (236)
T 1axi_B 175 ELQYKEVNETKWKMMDPI---LT--TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEV 228 (236)
T ss_dssp EEEEEETTCSSCEECCCB---SS--SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCC
T ss_pred EEEEEECCCCceEEEecc---CC--CEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCC
Confidence 999999887778754321 11 3366889999999999999999999 7888864
No 404
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.65 E-value=6.5e-16 Score=158.08 Aligned_cols=164 Identities=15% Similarity=0.244 Sum_probs=112.6
Q ss_pred CCCCCCcEEEEEEEeecC-----CCeeEEEEcCc--cC------------CCCceee----ecccEEEeCCCCCCCCeEE
Q psy12060 410 APKAGDKVRLECVAFGYP-----VPSYNWTRRGS--PL------------PRNAYFE----NFNRILTIPNVKVEDQGEY 466 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p-----~~~v~W~~~~~--~l------------~~~~~~~----~~~~~L~i~~~~~~d~G~Y 466 (978)
.+.+|++++|.|.+.+.| .+.|.|+|++. .+ ....++. ....+|.|.+++.+|+|.|
T Consensus 45 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 124 (252)
T 3bkj_L 45 PVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVY 124 (252)
T ss_dssp EECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCEEE
Confidence 457899999999999887 57999999652 11 0011111 1234899999999999999
Q ss_pred EEEEEeCCCce-EEEEEEEEEe---eceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCC-C---CCC
Q psy12060 467 ICRASNDRSAL-ESSVTISIQA---EPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSE-T---LPL 536 (978)
Q Consensus 467 ~C~a~n~~g~~-~~~~~l~V~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~-~---~~~ 536 (978)
+|.+.|..+.. ...+.|.|.. +|.+...+....+.+|+.++|.|.+.+. |. +.|+|+|+|..+... . ...
T Consensus 125 ~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 204 (252)
T 3bkj_L 125 YCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 204 (252)
T ss_dssp EEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCC
T ss_pred EEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcc
Confidence 99999875532 2234666653 5666654444445579999999999984 54 389999999987643 0 000
Q ss_pred CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCce
Q psy12060 537 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574 (978)
Q Consensus 537 ~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~ 574 (978)
...+........|.|..+.. +|+|.|+|.|.|.....
T Consensus 205 ~~~~g~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 205 DSKDSTYSMSSTLTLTKDEY-ERHNSYTCEATHKTSTS 241 (252)
T ss_dssp CTTTCCEEEEEEEEEEHHHH-HHCCEEEEEEECTTCSS
T ss_pred cCCCCCEEEEEEEEEcchhc-cCCCeEEEEEEeCCCCC
Confidence 01111222234689998885 89999999999976543
No 405
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.65 E-value=6e-16 Score=154.91 Aligned_cols=169 Identities=17% Similarity=0.228 Sum_probs=115.1
Q ss_pred CeeeecccCeEEEeCCCCCCCCc----eEEEeccccccccc-----------ccceEEEee--------CCcEEEeeeee
Q psy12060 304 PEIGNQNWGKAMFCDPPTNYPGV----NYYWARDYFPNFVE-----------EDKRVFVSY--------DGALYFSALEQ 360 (978)
Q Consensus 304 ~~~~~~~~~~~l~C~~~~~~p~~----~i~W~~~~~~~~~~-----------~~~~~~~~~--------~~~L~i~~~~~ 360 (978)
...+.+|+.++|.|.+..+.+.+ .|.|+|++....+. ...|..+.. +++|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 34567899999999985544443 49999997532111 023333332 56899999999
Q ss_pred ecceeeEEEEEeecccccccCCceeEEEccCCCccccccCCCCCCCCCCCCCCCCcEE-EEEEEe-ecCCCeeEEEEcCc
Q psy12060 361 IDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSNFQQLKFPNNFPKTFPEAPKAGDKVR-LECVAF-GYPVPSYNWTRRGS 438 (978)
Q Consensus 361 ~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~-l~C~~~-g~p~~~v~W~~~~~ 438 (978)
+|+|.|+|.+.+.... .....+.|.|..+|...... .. ...+|+.+. |.|.+. |.|.|.|+|++++.
T Consensus 88 ~D~G~Y~C~~~~~~~~--~~~~~~~L~V~~~P~~~~~~-~~--------~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~ 156 (221)
T 3eow_R 88 EDEGSYTCLFVTFPQG--SRSVDIWLRVLAKPQNTAEV-QK--------VQLTGEPVPMARCVSTGGRPPAQITWHSDLG 156 (221)
T ss_dssp CCCSCBEEEEEESSSC--SCEEECCCCCCCCCEEEEEE-EC--------CCCCSSSCCEEEEEEESCSSCCCEEEECSSS
T ss_pred HHCeEEEEEEEeCCCC--ceEEEEEEEEEECCCceeec-CC--------cccCCceEEEEEEECCCccCCCeeEEEeCCC
Confidence 9999999999986521 22333667777655433211 11 115788884 999988 89999999999865
Q ss_pred cCCCCcee-------eecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEEE
Q psy12060 439 PLPRNAYF-------ENFNRILTIPNVKVEDQGEYICRASNDRSALESSVTI 483 (978)
Q Consensus 439 ~l~~~~~~-------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 483 (978)
........ ....+.|.|.++..+|+|.|+|.|.|..+.....+.|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v 208 (221)
T 3eow_R 157 GMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTV 208 (221)
T ss_dssp CCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEE
T ss_pred CCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEE
Confidence 44322211 1123579999999999999999999988776555444
No 406
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.65 E-value=4.7e-14 Score=134.73 Aligned_cols=247 Identities=15% Similarity=0.271 Sum_probs=158.4
Q ss_pred eeeccCCcccccCCCceeEEEEeec-CC---CCeeEEeECCEECCCCCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEE
Q psy12060 490 NFTIPLTDKHMDNQADLTWTCEAFG-VP---DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 565 (978)
Q Consensus 490 ~~~~~~~~~~~~~g~~~~l~C~~~~-~p---~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C 565 (978)
.+.+.|....+..|+.++|+|.+.+ .| ..+++|+|||.++... ...|.+..+.. .|+|.|+|
T Consensus 4 tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa-------------T~tLti~s~t~-sdSG~YqC 69 (304)
T 3shs_A 4 TVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN-------------TATLTVADATS-ENAGSYKV 69 (304)
T ss_dssp EEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC-------------SSEEEESSCCG-GGCEEEEE
T ss_pred EEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC-------------cceEEeeeccc-cCCeEEEE
Confidence 3444566678999999999999874 45 4589999999887631 23677777775 89999999
Q ss_pred EEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEee--cc-CC-----CCeeEEeeCCEEecCCCcEEE
Q psy12060 566 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EA-AP-----KPKFVWKKDGNIIGSGGRRKI 637 (978)
Q Consensus 566 ~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~--~~-~p-----~~~i~W~~~g~~~~~~~~~~~ 637 (978)
++.+..|....+..+.|....+.......+....+..|..+.|.+.+ .| .| ..+++|++++..+...
T Consensus 70 vVTDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA----- 144 (304)
T 3shs_A 70 TVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT----- 144 (304)
T ss_dssp EEEETTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS-----
T ss_pred EEEECCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc-----
Confidence 99998887665555555532221111112234445678899999987 44 34 3599999999876432
Q ss_pred eecCcEEEccccCCCCEEEEEEEEeCCceeeeeEEE--EEEeCCceeeeCCCceEEEccccEEEEEEee--------ecC
Q psy12060 638 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL--IVLHGPSYYEQLPPKITIAAHRNLQLRCSAH--------TEE 707 (978)
Q Consensus 638 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~--------~~p 707 (978)
..|++......++|.|+|++.|..+....+... .+...+ +....-...++..|+.+.|.-.+. |.|
T Consensus 145 ---q~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (304)
T 3shs_A 145 ---QDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMN-VDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMP 220 (304)
T ss_dssp ---SEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEE-EEECCCSEEEEETTSCEEECCEEEEECCSCCTTCC
T ss_pred ---cccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccc-cchhheEeehhhcCcEEEEEEEEeeccccCCCCCC
Confidence 247788888899999999999987744444333 322211 112223345677888888876553 344
Q ss_pred CcCeEEEEee--CCEEccc---cccc-cccCCeeecCCceEEEeccCCCCCEEEEEEEE
Q psy12060 708 LLDVAYIWTH--NGVRIGN---MDLN-ELETPNINIDGGLLEITNASFADAGEYECVVK 760 (978)
Q Consensus 708 ~~~~~~~W~~--~g~~~~~---~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~ 760 (978)
...+.+.|+. .|..-+. +... ..+...+. .++.|.-......|...|.|.|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 221 NLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSIT-PDGHLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp EEEEEEEEEEECTTCCSCEEEESSSEECGGGEEEC-TTSCEEESSCCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeecCccCchhhhhhhhhhhccceeC-CCcceeecccccccchheeeHHH
Confidence 5567778874 3332110 0000 01111122 24566667788899999999984
No 407
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.65 E-value=1.6e-15 Score=155.47 Aligned_cols=179 Identities=14% Similarity=0.150 Sum_probs=114.9
Q ss_pred CCeeEeCCCceEecCCCccccCcEEEEEEeecC--CCCeEEEEEcc--ccccccccc-------ccCCCCCCceEee---
Q psy12060 189 GPYFIKQPTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKED--YVQDRLVAN-------LIDPLSDKRFTLS--- 254 (978)
Q Consensus 189 ~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~--p~~~v~W~~~~--~~~~~~~~~-------~~~~~~~~~~~~~--- 254 (978)
+|.+...|...++. +|++|+|.|.+.+. |.+.+.|||.. .....+... ........|+.+.
T Consensus 6 ~~~~~~~~~~~~v~-----~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~ 80 (256)
T 3juy_B 6 HQVQLVQSGAEVKK-----PGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADT 80 (256)
T ss_dssp -CCEEEECCCEEEC-----TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEET
T ss_pred ceEEEEecCCceec-----CCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEec
Confidence 46677777777754 46679999999873 67899999853 211111000 1112223455543
Q ss_pred ---cceEEEeCCCCCCCCeEEEEEEEeC-----------ceeEEeEEEEEEEeeec---------------ccccCCCCe
Q psy12060 255 ---GGNLIINDPRQVEDRGSYHCKASNK-----------FGSIISESVQLAFGFIG---------------EFNLKRAPE 305 (978)
Q Consensus 255 ---~~~l~i~~~~~~~d~G~Y~C~a~n~-----------~g~~~s~~~~l~v~~~~---------------~~~~~~~~~ 305 (978)
..+|.|.++ +.+|+|.|.|.|.|. ........+.|.|...+ .+...+...
T Consensus 81 ~~~~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
T 3juy_B 81 SANTAYMELRSL-RSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTL 159 (256)
T ss_dssp TTTEEEEEECSC-CGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEE
T ss_pred CCCEEEEEECCC-CcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeE
Confidence 126999998 899999999999986 22233445566665432 222334455
Q ss_pred eeecccCeEEEeCCCCCCCC-ceEEEecc--cccccc----------cccceEEEeeCC---cEEEeeeeeecceeeEEE
Q psy12060 306 IGNQNWGKAMFCDPPTNYPG-VNYYWARD--YFPNFV----------EEDKRVFVSYDG---ALYFSALEQIDAGNYSCN 369 (978)
Q Consensus 306 ~~~~~~~~~l~C~~~~~~p~-~~i~W~~~--~~~~~~----------~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~ 369 (978)
.+.+|+.++|.|.+.. .|. +.+.|+|. +..... ....++.+..++ +|.|.+++.+|+|.|+|.
T Consensus 160 ~v~~G~~v~L~C~~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 238 (256)
T 3juy_B 160 SLSPGERATFSCRSSH-SIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQ 238 (256)
T ss_dssp EECTTSCEEEEEEESS-CCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred EEeCCCCEEEEEEECC-CcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEE
Confidence 6788999999999854 454 89999984 222110 012344443333 599999999999999999
Q ss_pred EEeec
Q psy12060 370 VQSKV 374 (978)
Q Consensus 370 ~~n~~ 374 (978)
|.|..
T Consensus 239 ~~~~~ 243 (256)
T 3juy_B 239 VYGAS 243 (256)
T ss_dssp ECCSS
T ss_pred EeeCC
Confidence 98854
No 408
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.65 E-value=3.3e-16 Score=156.57 Aligned_cols=165 Identities=17% Similarity=0.287 Sum_probs=112.2
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcCc--c---C---CC-------------Cceee------ecccEEEeCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRGS--P---L---PR-------------NAYFE------NFNRILTIPNVKV 460 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~~--~---l---~~-------------~~~~~------~~~~~L~i~~~~~ 460 (978)
.+.+|++++|.|.+.+.+ .+.|.|+|++. . + .. ..++. .....|.|.+++.
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 90 (220)
T 1pz5_B 11 LVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRA 90 (220)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred EEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCH
Confidence 457999999999998766 67999999641 1 1 00 11111 1123899999999
Q ss_pred CCCeEEEEEEEeCCCce-E--EEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEECCC
Q psy12060 461 EDQGEYICRASNDRSAL-E--SSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELLNS 531 (978)
Q Consensus 461 ~d~G~Y~C~a~n~~g~~-~--~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~~~ 531 (978)
+|+|.|.|.+.+..+.. . ..+.|.|. .+|.+...+....+.+|+.++|.|.+.|. |.+ .|+|++++.....
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~ 170 (220)
T 1pz5_B 91 EDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGV 170 (220)
T ss_dssp GGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTE
T ss_pred HHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccce
Confidence 99999999999975432 1 34667776 34665544433456789999999999987 888 9999998764210
Q ss_pred CCCC-CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeE
Q psy12060 532 ETLP-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 577 (978)
Q Consensus 532 ~~~~-~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~ 577 (978)
.... ......+ ...+.|.|..+.. +| |.|+|.|.|..+.....
T Consensus 171 ~~~~~~~~~~~~-~~~s~L~i~~~~~-~~-g~Y~C~a~n~~~~~~~~ 214 (220)
T 1pz5_B 171 RTVSSVLQSGFY-SLSSLVTVPSSTW-PS-QTVICNVAHPASKVDLI 214 (220)
T ss_dssp EECCCEEETTEE-EEEEEEEECGGGT-TT-SCCEEEEEEGGGTEEEE
T ss_pred EEcCCcccCCeE-EEEEEEEEcchhc-CC-ceEEEEEEECCccEeee
Confidence 0000 0011222 2345788888774 56 99999999998865443
No 409
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.64 E-value=2.1e-15 Score=154.61 Aligned_cols=182 Identities=16% Similarity=0.195 Sum_probs=113.0
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEcc--cccccccc-------cccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~--~~~~~~~~-------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.|.| .+.+.|||.. ..+..+.. .........|+.+. ..+|.|.++ +.+|+
T Consensus 15 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v-~~~Ds 93 (256)
T 3umt_A 15 KPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL-TSEDS 93 (256)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC-CGGGC
T ss_pred cCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC-CcccC
Confidence 3577799999999876 6899999853 11111100 00111123454433 224999997 89999
Q ss_pred eEEEEEEEeCc---eeEEeEEEEEEEee----------------ecccccCCCCeeeecccCeEEEeCCCCCCCCceEEE
Q psy12060 270 GSYHCKASNKF---GSIISESVQLAFGF----------------IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGVNYYW 330 (978)
Q Consensus 270 G~Y~C~a~n~~---g~~~s~~~~l~v~~----------------~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~~i~W 330 (978)
|.|.|.|.|.. .......+.|.|.. .+.+...+....+.+|+.++|.|.+ .+.|.+.+.|
T Consensus 94 G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~~~~v~W 172 (256)
T 3umt_A 94 AVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRA-SQDIGSNLNW 172 (256)
T ss_dssp EEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEE-SSCCTTCEEE
T ss_pred EEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEE-ecCCCcEEEE
Confidence 99999999872 12234456666653 2222233344567889999999998 4567779999
Q ss_pred eccc--cccc-c---------cccceEEEeeCC---cEEEeeeeeecceeeEEEEEeecccccccCCceeEEEccCC
Q psy12060 331 ARDY--FPNF-V---------EEDKRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHS 392 (978)
Q Consensus 331 ~~~~--~~~~-~---------~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~ 392 (978)
+|+. .... + ....++....++ +|.|.+++.+|+|.|+|.|.+.... .-..-..|.|...+
T Consensus 173 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~--~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 173 LQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPP--TFGGGTKLEIKRAA 247 (256)
T ss_dssp EEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSC--EECCCEEEEEC---
T ss_pred EEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCc--EECCCEEEEEECCC
Confidence 9953 2111 0 012344443332 5999999999999999999885432 12233678887654
No 410
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.64 E-value=9.1e-16 Score=152.35 Aligned_cols=171 Identities=18% Similarity=0.233 Sum_probs=118.6
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEeeC--CEEec------------CCCcEEEee---cCcEEEccccCCCCEEEEEE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIG------------SGGRRKIFE---NGNLLISPVSRDDSGIYSCT 659 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--g~~~~------------~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~ 659 (978)
.+.+.+|++++|.|.+. |.+.+.|+|+ +..+. ...++.+.. +.+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 45688999999999998 7889999983 22211 223444332 23599999999999999999
Q ss_pred EEeCCc--eeeeeEEEEEE----eCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccc---
Q psy12060 660 ATNVHG--MDESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL--- 730 (978)
Q Consensus 660 a~n~~g--~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~--- 730 (978)
|.|..| .......|.|. .+|.+... +.......|+.++|.|.+.+.+++.+.+.|+++|..+........
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 165 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLF-PPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSK 165 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEE-CCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEE
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEec-CCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceE
Confidence 999887 34455677776 34443332 222233379999999999997766678899999998854210000
Q ss_pred cCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeE
Q psy12060 731 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770 (978)
Q Consensus 731 ~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~ 770 (978)
...........|.|..+..+|+|.|+|.|.|..|....++
T Consensus 166 ~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 166 QSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp CTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 0000001124688888888899999999999988766554
No 411
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.64 E-value=6.5e-16 Score=131.08 Aligned_cols=91 Identities=19% Similarity=0.319 Sum_probs=72.0
Q ss_pred CCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCc---cceeeeeeeccceeEEEEEcCCCCceeeE
Q psy12060 884 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT---EFQSETLKEYGNVGIAVVRIPSEFYYTEY 960 (978)
Q Consensus 884 ~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 960 (978)
.|..+|.++.+...++++|.|+|++|+.+..||.|+||+|+|++.+.. +|....+.. +.+ .+.|.+|+|+|.|
T Consensus 3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~--~~~--~~~l~~L~p~t~Y 78 (102)
T 3n1f_C 3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEG--SKQ--WHMIGHLQPETSY 78 (102)
T ss_dssp -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEET--TCS--EEEECSCCTTCEE
T ss_pred CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcC--Cce--EEECCCCCCCCEE
Confidence 577899999999999999999999977777999999999999987643 565544432 222 3679999999999
Q ss_pred EEEEEEecCCCCCCCCCC
Q psy12060 961 EVKVQAINDVGPGPESEV 978 (978)
Q Consensus 961 ~~~V~A~n~~G~gp~S~~ 978 (978)
.|+|+|+|.+|.||+|++
T Consensus 79 ~v~V~A~n~~G~G~~S~~ 96 (102)
T 3n1f_C 79 DIKMQCFNEGGESEFSNV 96 (102)
T ss_dssp EEEEEEEETTEECCCCCC
T ss_pred EEEEEEECCCcCCCCCCC
Confidence 999999999999999974
No 412
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=1.2e-16 Score=158.82 Aligned_cols=174 Identities=17% Similarity=0.175 Sum_probs=109.0
Q ss_pred CCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcc--ccccccccc--ccCCCCCCceEee----cceEEEeCCCCCC
Q psy12060 196 PTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVAN--LIDPLSDKRFTLS----GGNLIINDPRQVE 267 (978)
Q Consensus 196 p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~--~~~~~~~~~--~~~~~~~~~~~~~----~~~l~i~~~~~~~ 267 (978)
|....+. +|++++|.|.+.+.|.+.|.|||++ ..+..+... ........++... ..+|.|.++ +.+
T Consensus 6 p~~~~v~-----~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v-~~~ 79 (212)
T 1nfd_E 6 PSSASVT-----VGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGA-QPE 79 (212)
T ss_dssp CSEEEEE-----TTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTC-CGG
T ss_pred CCeEEEe-----CCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcC-Ccc
Confidence 5555543 4667999999999988899999964 222111000 0011113444432 237999997 899
Q ss_pred CCeEEEEEEEeCc--eeEEeEEEEEEEe----eecccccCCCCeeeecccCeEEEeCCCCCCCC-ceEEEeccccccccc
Q psy12060 268 DRGSYHCKASNKF--GSIISESVQLAFG----FIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPNFVE 340 (978)
Q Consensus 268 d~G~Y~C~a~n~~--g~~~s~~~~l~v~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~i~W~~~~~~~~~~ 340 (978)
|+|.|+|.|.|.. .......+.|.|. .+|.+...........|+.++|.|.+.+..|+ +.|+|+|+|.++...
T Consensus 80 D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 159 (212)
T 1nfd_E 80 DEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDG 159 (212)
T ss_dssp GCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSS
T ss_pred cCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCC
Confidence 9999999999732 2223344556653 22222222222334467789999998555465 899999998765322
Q ss_pred ccce-EE-----EeeCCcEEEeeeeeecceeeEEEEEeecc
Q psy12060 341 EDKR-VF-----VSYDGALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 341 ~~~~-~~-----~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
.... .. ....+.|.|.++..+|+|.|+|.|.|..+
T Consensus 160 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (212)
T 1nfd_E 160 VKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGE 200 (212)
T ss_dssp CBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTT
T ss_pred eecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCc
Confidence 1100 00 11125699999999999999999999764
No 413
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.64 E-value=9.9e-16 Score=157.08 Aligned_cols=180 Identities=19% Similarity=0.176 Sum_probs=116.7
Q ss_pred cccccCCCceeEEEEeecCC--CCeeEEeEC--CEECCC-------C--CCCCCCCCcEEEec------CEEEEEeCCCC
Q psy12060 497 DKHMDNQADLTWTCEAFGVP--DVTYSWFRN--GELLNS-------E--TLPLEDQDRYFIQD------NVLTIRYLNPE 557 (978)
Q Consensus 497 ~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~--g~~~~~-------~--~~~~~~~~~~~~~~------~~l~i~~~~~~ 557 (978)
...+.+|++++|.|.+.+.| .+.|.|+|+ +..+.. . ........++.+.. ..|.|.++..
T Consensus 9 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~- 87 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT- 87 (257)
T ss_dssp CSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT-
T ss_pred CccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc-
Confidence 45688999999999999875 789999985 221110 0 00001234555432 3899999997
Q ss_pred CCCeEEEEEEEcCCC-------ce--eeEEEEEEEEcC------------CccccCCCCcceeecCCCeEEEEEeeccCC
Q psy12060 558 RDPAMYQCRAKNQLK-------TR--YSSAQLRVLTLK------------PSFKKRPLESETYAGEGGNVTIFCNPEAAP 616 (978)
Q Consensus 558 ~d~G~Y~C~a~n~~g-------~~--~~~~~l~v~~~~------------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 616 (978)
+|+|.|+|.|.|..| .. .....|.|...+ +.......+....+.+|++++|.|.+.+.|
T Consensus 88 ~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 167 (257)
T 1f3r_B 88 DDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNI 167 (257)
T ss_dssp TCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCC
T ss_pred ccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcC
Confidence 999999999999854 11 123456665321 011111112344578999999999999998
Q ss_pred CCeeEEee--CCEEec------------CCCcEEEeec---CcEEEccccCCCCEEEEEEEEeCCceeeeeEEEEEEe
Q psy12060 617 KPKFVWKK--DGNIIG------------SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 677 (978)
Q Consensus 617 ~~~i~W~~--~g~~~~------------~~~~~~~~~~---~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 677 (978)
.+.+.|+| +|..+. ...++.+... .+|.|.+++.+|+|.|+|.|.|..........|.|..
T Consensus 168 ~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~ 245 (257)
T 1f3r_B 168 NNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKA 245 (257)
T ss_dssp BTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSS
T ss_pred CCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeC
Confidence 88999999 554331 1234443322 2599999999999999999999651222233555543
No 414
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.64 E-value=1.6e-15 Score=154.94 Aligned_cols=175 Identities=14% Similarity=0.194 Sum_probs=112.3
Q ss_pred ceeecCCCeEEEEEeeccCCCCe-----eEEeeCCEEecC--------CCcEE-------E------eecCcEEEccccC
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPK-----FVWKKDGNIIGS--------GGRRK-------I------FENGNLLISPVSR 650 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~-----i~W~~~g~~~~~--------~~~~~-------~------~~~~~l~i~~~~~ 650 (978)
...+..|++++|.|.+.+.|.+. +.|++++..... +.... + ..+.+|.|.+++.
T Consensus 12 ~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~ 91 (248)
T 3pv7_A 12 TQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQL 91 (248)
T ss_dssp EEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCG
T ss_pred CeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCH
Confidence 44578999999999999888765 999986322110 00000 0 0123499999999
Q ss_pred CCCEEEEEEEEeCCceeeeeEEEEEEeCCceeeeCCCceEEEccccEEEEEEeee-cCCcCeEEEEeeCCEEcccccc--
Q psy12060 651 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGNMDL-- 727 (978)
Q Consensus 651 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~~W~~~g~~~~~~~~-- 727 (978)
+|+|.|+|.+.|..+.......|.|..+|.+..... .....|..+.|.|.+.+ .|.+ +.+.|+++|..+.....
T Consensus 92 ~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~--~~~~~~~~~~L~C~~~g~~P~p-i~v~W~k~g~~l~~~~~~~ 168 (248)
T 3pv7_A 92 EEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD--QVGMKENEDKYMCESSGFYPEA-INITWEKQTQKFPHPIEIS 168 (248)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC----------CEEEEEEEEEBSSC-CEEEEEEECSSSCSCEEEC
T ss_pred HHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC--CccccCCCcEEEEEEccEECCC-eEEEEEECCccCCCccccc
Confidence 999999999999988888888999988777544332 33456778889999999 5544 57799999865432100
Q ss_pred --------ccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCc--eeeeEEEEEc
Q psy12060 728 --------NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVIVE 775 (978)
Q Consensus 728 --------~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~--~s~~~~l~v~ 775 (978)
.......+ .....|.|.....+|.|.|+|.|.|..+. .+..+.|.|.
T Consensus 169 ~~~~~~~~~~~~~~~~-~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 169 EDVITGPTIKNMDGTF-NVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp TTEEEEEEEECTTSCE-EEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred cceeecccEECCCCCE-EEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 00000011 11246778888889999999999999886 4456666663
No 415
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.64 E-value=1e-15 Score=148.94 Aligned_cols=174 Identities=14% Similarity=0.112 Sum_probs=122.7
Q ss_pred CCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCceeEEE
Q psy12060 780 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 859 (978)
Q Consensus 780 ~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~ 859 (978)
+|.|+++.... ....|+|++|.+.++.+. |.|+|+.. ..|...... ...+...|.+ |.++..|.||
T Consensus 4 ~P~nv~~~s~n-~~~iL~W~pp~~~~~~v~-Y~V~y~~~--~~w~~~c~~---------~~~~~c~lt~-l~~~~~Y~~r 69 (201)
T 3lqm_A 4 PPENVRMNSVN-FKNILQWESPAFAKGQLT-FTAQYLSY--RIFQDKCMQ---------TTLTECDFSS-LSKYGDHTLR 69 (201)
T ss_dssp CCEEEEEEEET-TEEEEEEECCCCSSSCCE-EEEEEEET--TEEEEEEEE---------ESSSEEECTT-SCSSSCEEEE
T ss_pred CCcccEEEEEC-CceEEEECCCCCCCCCeE-EEEEEEEC--CCcccCcCc---------cCCCEEECCC-CccCCCEEEE
Confidence 57899885544 457899999988777665 99999875 457632211 1345667888 9999999999
Q ss_pred EEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCC---------CcceEEEEEEecCC
Q psy12060 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA---------PNIYYKIFWRKKND 930 (978)
Q Consensus 860 v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g---------~i~~Y~i~~~~~~~ 930 (978)
|+|.|..|.|..+.. .|.......++|| .+.+. ...++|.|.|.+|.. ..+| .+..|.|.|++.+.
T Consensus 70 V~A~~~~~~S~~s~~--~f~~~~~t~~~PP-~v~~~-~~~~si~v~w~~P~~-~~~~~~~~~~~~~~~l~Y~v~y~~~~~ 144 (201)
T 3lqm_A 70 VRAEFADEHSDWVQI--TFSPVDDTIIGPP-GMQVE-VLADCLHMRFLAPKI-ENEYETWTMKNVYNSWTYNVQYWKQGT 144 (201)
T ss_dssp EEEEETTEECCCEEE--EECHHHHSBCCCC-EEEEE-EETTEEEEEEECCEE-ECSSCEEEHHHHCTTCEEEEEEEETTC
T ss_pred EEEecCCCcCcceee--eeeecccCeeCCC-EEEEE-EeCCEEEEEEcCCCc-cCCCcccCHHHhCCceEEEEEEEECCC
Confidence 999999998887653 3322111223566 57764 446799999999542 2234 38999998887664
Q ss_pred ccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEEecC--CCCCCCCCC
Q psy12060 931 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND--VGPGPESEV 978 (978)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~--~G~gp~S~~ 978 (978)
..... +. ... ..+.|.+|+|++.|.|+|+|.+. .|.|++|++
T Consensus 145 ~~~~~--~~--~~~--~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~ 188 (201)
T 3lqm_A 145 DEKFQ--IT--PQY--DFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEP 188 (201)
T ss_dssp CCCEE--EC--CSS--SEEEECSCCTTCEEEEEEEEEETTTTEECCCCCC
T ss_pred CcEEE--EE--ecC--ceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCC
Confidence 43221 11 111 23679999999999999999997 799999964
No 416
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.64 E-value=1.2e-15 Score=152.53 Aligned_cols=168 Identities=17% Similarity=0.206 Sum_probs=104.9
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEcc--cccccccc-------cccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~--~~~~~~~~-------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.|.| .+.|.|||++ ..+..+.. .........|+.+. +.+|.|.++ +.+|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~ 91 (219)
T 1c1e_H 13 KPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL-KNEDM 91 (219)
T ss_dssp CTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC-CGGGC
T ss_pred cCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC-CcccC
Confidence 3467799999999876 6899999984 32211100 00011123455442 258999998 89999
Q ss_pred eEEEEEEEeCcee---EEeEEEEEEEeee----cccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccccccccc
Q psy12060 270 GSYHCKASNKFGS---IISESVQLAFGFI----GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEE 341 (978)
Q Consensus 270 G~Y~C~a~n~~g~---~~s~~~~l~v~~~----~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~~ 341 (978)
|.|+|.|.|..+. ..+..+.|.|... |.+....+...+..|+.++|.|.+.++.|.+ .|+|+|+|..+....
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~ 171 (219)
T 1c1e_H 92 ATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 171 (219)
T ss_dssp EEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred EEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceEe
Confidence 9999999998631 2334566766543 2221122222345788899999995448888 999999987642111
Q ss_pred cceEEE----eeCCcEEEeeeeeecceeeEEEEEeeccc
Q psy12060 342 DKRVFV----SYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (978)
Q Consensus 342 ~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 376 (978)
...... ...+.|.| .....|.|.|+|.|.|..+.
T Consensus 172 ~~~~~~~~~~~~~s~L~i-~~~~~d~g~Y~C~a~n~~~~ 209 (219)
T 1c1e_H 172 FPAVLQSDLYTLSSSVTV-PSSPRPSETVTCNVAHPASS 209 (219)
T ss_dssp CCCEESSSCEEEEEEEEE-ESSSTTTSCCEEEEEEGGGT
T ss_pred cCCcccCCeEEEEEEEEE-ecccCCCCEEEEEEEeCCCC
Confidence 111110 11135788 44444679999999997653
No 417
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.64 E-value=7.5e-17 Score=160.56 Aligned_cols=183 Identities=14% Similarity=0.160 Sum_probs=107.5
Q ss_pred CCCeeEeCCCceEecCCCccccCcEEEEEEeecC---CC-CeEEEEEcccccccccccccCCCCCCceEeecceEEEeCC
Q psy12060 188 RGPYFIKQPTDVVFDLSKRSILNDITLSCYAGGY---PN-PSYEWFKEDYVQDRLVANLIDPLSDKRFTLSGGNLIINDP 263 (978)
Q Consensus 188 ~~P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~---p~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 263 (978)
.+|.+...|.+.... +.+|++++|.|.+.|. |. +.|+|+|++..+............+.++. ..++|.|.++
T Consensus 8 ~~p~v~~~pp~~~~~---v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~~~L~I~~~ 83 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDV---LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIR-VVSTLPIQHQ 83 (218)
T ss_dssp -CCEEEEECCCHHHH---HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEE-EEEEEECCHH
T ss_pred CCCEEEEECcCHHHh---hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEE-EEEEEEEcHH
Confidence 356666655543200 2357789999999987 44 79999999976532111000001122222 2357888876
Q ss_pred CCCCCCeEEEEEEEeCceeE-EeEEEEE--EEeeecccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccccccc
Q psy12060 264 RQVEDRGSYHCKASNKFGSI-ISESVQL--AFGFIGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFV 339 (978)
Q Consensus 264 ~~~~d~G~Y~C~a~n~~g~~-~s~~~~l--~v~~~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~ 339 (978)
+.+|+|.|+|.|.|..+.. ....+.+ .+..+|.+.+.........|+.++|.|.+.+..|++ .|+|+|+|.++..
T Consensus 84 -~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 162 (218)
T 2rgs_A 84 -DWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEEN 162 (218)
T ss_dssp -HHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECC
T ss_pred -HcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccC
Confidence 8899999999999987642 1122211 222333332222221122477899999995446765 9999999987432
Q ss_pred cccceEEEeeCCcEEEe------eeeeecceeeEEEEEeecc
Q psy12060 340 EEDKRVFVSYDGALYFS------ALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 340 ~~~~~~~~~~~~~L~i~------~~~~~d~G~Y~C~~~n~~~ 375 (978)
....+.....+|++.+. ....+|.|.|+|.|.|...
T Consensus 163 ~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 163 YKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred ceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 11112223455654443 3333469999999999753
No 418
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.64 E-value=2e-15 Score=153.40 Aligned_cols=174 Identities=16% Similarity=0.260 Sum_probs=113.7
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecCC----CCeEEEEEcc--cccccccc--cccCCCCCCceEee----cceEE
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYP----NPSYEWFKED--YVQDRLVA--NLIDPLSDKRFTLS----GGNLI 259 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p----~~~v~W~~~~--~~~~~~~~--~~~~~~~~~~~~~~----~~~l~ 259 (978)
|+..|.+..+. +|++++|.|.+.+.| .+.|.|||++ ..+..+.. .........|+... ..+|.
T Consensus 4 v~~~p~~~~v~-----~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 78 (240)
T 1moe_A 4 LTQSPASLAVS-----LGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLI 78 (240)
T ss_dssp EEEECSEEEEC-----TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred eEeeCCeEEec-----CCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEE
Confidence 44456666554 466799999999998 7899999974 21111100 00111123454442 22799
Q ss_pred EeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecc------cccCCCCeeeecccCeEEEeCCCCCCC--CceEEEe
Q psy12060 260 INDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE------FNLKRAPEIGNQNWGKAMFCDPPTNYP--GVNYYWA 331 (978)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~------~~~~~~~~~~~~~~~~~l~C~~~~~~p--~~~i~W~ 331 (978)
|.++ +.+|+|.|+|.|.|..+...+..+.|.|...+. +...+....+.+|+.++|.|.+. +.| .+.|.|+
T Consensus 79 I~~v-~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~~~v~W~ 156 (240)
T 1moe_A 79 IDPV-EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTAS-GFNIKDTYMHWV 156 (240)
T ss_dssp ESSC-CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEE-SSCGGGSCEEEE
T ss_pred EcCC-ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEc-CccCCCCEEEEE
Confidence 9997 899999999999998665344556677655421 22234456778899999999984 444 4689999
Q ss_pred ccc--cccc-c--------------cccceEEEeeC-----CcEEEeeeeeecceeeEEEEEe
Q psy12060 332 RDY--FPNF-V--------------EEDKRVFVSYD-----GALYFSALEQIDAGNYSCNVQS 372 (978)
Q Consensus 332 ~~~--~~~~-~--------------~~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~~~n 372 (978)
|+. .... + ....++.+..+ .+|.|.+++.+|+|.|+|.|.+
T Consensus 157 k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 157 KQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 962 2210 0 01234554432 3699999999999999999985
No 419
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.63 E-value=2.1e-15 Score=153.78 Aligned_cols=170 Identities=18% Similarity=0.227 Sum_probs=117.6
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEee----------------CCEEecCC---CcEEEee----cCcEEEccccCCCC
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKK----------------DGNIIGSG---GRRKIFE----NGNLLISPVSRDDS 653 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~----------------~g~~~~~~---~~~~~~~----~~~l~i~~~~~~d~ 653 (978)
.+.+.+|++++|.|.+.+.+.+.+.|+| ++...... .++.+.. ..+|.|.+++.+|+
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 89 (246)
T 4dzb_B 10 WVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 89 (246)
T ss_dssp EEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGC
T ss_pred EEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHC
Confidence 3457899999999999999999999998 33333322 4555443 22599999999999
Q ss_pred EEEEEEEEeCCc----eeeeeEEEEEEe------CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcc
Q psy12060 654 GIYSCTATNVHG----MDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 723 (978)
Q Consensus 654 G~Y~C~a~n~~g----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~ 723 (978)
|.|+|.|.|..+ .......|.|.. +|.+....+....+..|+.++|.|.+.+.+++.+.+.|+++|..+.
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 169 (246)
T 4dzb_B 90 SFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 169 (246)
T ss_dssp EEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECC
Confidence 999999997654 222345677764 3433333334444556899999999999887777889999999886
Q ss_pred cccccccc---------CCeeecCCceEEEeccCCCC-CEEEEEEEEcCCCcee
Q psy12060 724 NMDLNELE---------TPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKIS 767 (978)
Q Consensus 724 ~~~~~~~~---------~~~~~~~~~~l~i~~~~~~d-~g~Y~c~a~n~~G~~s 767 (978)
........ ...+. -...|.|.....+| .|.|+|.|.|......
T Consensus 170 ~~~~~~~~~~~~~~~~~~g~~~-~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 170 SGVCTDPQPLKEQPALNDSRYA-LSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp TTEEECSSCEESSTTSTTCCEE-EEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred CCcccccccccccccCCCCCEE-EEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 53211000 00010 01347888887788 9999999999876544
No 420
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.63 E-value=1.5e-15 Score=152.24 Aligned_cols=167 Identities=14% Similarity=0.162 Sum_probs=102.7
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEccc--ccccccc-------cccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLVA-------NLIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~~--~~~~~~~-------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.|.| .+.|.|||++. .+..+.. .........|+.+. +.+|.|.++ +.+|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v-~~~D~ 91 (227)
T 1mju_H 13 KPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL-TSDDS 91 (227)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC-CGGGC
T ss_pred cCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC-CcccC
Confidence 3467799999999887 68999999752 1111100 00011123455542 348999998 99999
Q ss_pred eEEEEEEEeCceeEEeEEEEEEEeee----cccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccccccccccce
Q psy12060 270 GSYHCKASNKFGSIISESVQLAFGFI----GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPNFVEEDKR 344 (978)
Q Consensus 270 G~Y~C~a~n~~g~~~s~~~~l~v~~~----~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~~~~~~~~~ 344 (978)
|.|.|.+.|..+......+.|.|... |.+....+...+..|+.++|.|.+.+..|.+ .|+|+|++..+.......
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~ 171 (227)
T 1mju_H 92 AVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA 171 (227)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCC
T ss_pred EEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCc
Confidence 99999999875433334556776531 2222112223345688899999996545766 999999987642111111
Q ss_pred EE----EeeCCcEEEeeeeeecceeeEEEEEeecc
Q psy12060 345 VF----VSYDGALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 345 ~~----~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
.. ....+.|.|..+..+| |.|+|.|.|..+
T Consensus 172 ~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 205 (227)
T 1mju_H 172 VLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 205 (227)
T ss_dssp EEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGG
T ss_pred eecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCC
Confidence 11 1123468888888878 999999999754
No 421
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.63 E-value=1.2e-15 Score=157.87 Aligned_cols=200 Identities=19% Similarity=0.231 Sum_probs=112.2
Q ss_pred CCCCeEEEEEEEcCCCceeeEEEEEEEEcCCccccCCCCcceeecCCCeEEEEEeeccCCCCeeEEeeC--CEEe-----
Q psy12060 557 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNII----- 629 (978)
Q Consensus 557 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--g~~~----- 629 (978)
+.|.+.|.|.+.|..|.......+.|.. +| ..+.+.+|++++|.|.+.+ +.+.+.|+|. +...
T Consensus 5 ~~~~~~y~~~~~~~~g~~~~~~~~~v~~-~p--------~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~ 74 (270)
T 3qib_D 5 RADLIAYLKQATKGGGGSGGGGGMKVIQ-TP--------RYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLIN 74 (270)
T ss_dssp -----------------------CCCEE-EC--------SEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEE
T ss_pred hhhHHHHHHHHhccCCccccccceeEEe-CC--------CeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEE
Confidence 4789999999999877655554444443 11 2345789999999999866 6679999982 2110
Q ss_pred -------cCC---C-cEEEee----cCcEEEccccCCCCEEEEEEEEeCC----ceeeeeEEEEEEe------CCceeee
Q psy12060 630 -------GSG---G-RRKIFE----NGNLLISPVSRDDSGIYSCTATNVH----GMDESKGRLIVLH------GPSYYEQ 684 (978)
Q Consensus 630 -------~~~---~-~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~----g~~~~~~~l~v~~------~p~~~~~ 684 (978)
... . ++.+.. +.+|.|.+++.+|+|.|.|.+.+.. ........|.|.. +|.+...
T Consensus 75 ~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~ 154 (270)
T 3qib_D 75 FQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVF 154 (270)
T ss_dssp EETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEE
T ss_pred ECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEE
Confidence 000 0 444332 2359999999999999999999643 2223345677765 3333322
Q ss_pred CCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccc---------cCCeeecCCceEEEeccCCCC-CEE
Q psy12060 685 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL---------ETPNINIDGGLLEITNASFAD-AGE 754 (978)
Q Consensus 685 ~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~---------~~~~~~~~~~~l~i~~~~~~d-~g~ 754 (978)
.+....+..|+.++|.|.+.+.+++.+.+.|+++|..+........ ....+.. ...|.|.....+| .|.
T Consensus 155 ~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~-~s~L~i~~~~~~d~~g~ 233 (270)
T 3qib_D 155 EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYAL-SSRLRVSATFWQNPRNH 233 (270)
T ss_dssp ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEE-EEEEEEEHHHHHSTTCE
T ss_pred CCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEE-EEEEEEcHHHhccCCCe
Confidence 2333334458999999999996555578899999998864211000 0011111 1356777777777 999
Q ss_pred EEEEEEcCCCcee
Q psy12060 755 YECVVKSTVGKIS 767 (978)
Q Consensus 755 Y~c~a~n~~G~~s 767 (978)
|+|.|.|......
T Consensus 234 YtC~v~~~~l~~~ 246 (270)
T 3qib_D 234 FRCQVQFYGLSEN 246 (270)
T ss_dssp EEEEEEECCBCTT
T ss_pred EEEEEEecCCCCc
Confidence 9999999766443
No 422
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.63 E-value=6.2e-15 Score=151.30 Aligned_cols=192 Identities=15% Similarity=0.159 Sum_probs=115.8
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecC--CCCeEEEEEccc--ccccccc------cccCCCCCCceEee------c
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKEDY--VQDRLVA------NLIDPLSDKRFTLS------G 255 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~--p~~~v~W~~~~~--~~~~~~~------~~~~~~~~~~~~~~------~ 255 (978)
.+..|.+..+ .+|++++|.|.+.|. |.+.+.|||... ....+.. .........|+.+. .
T Consensus 11 ~~~~p~~~~v-----~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 85 (257)
T 3gkz_A 11 QLQESGPSLV-----KPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQ 85 (257)
T ss_dssp EEEEECCSEE-----CTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTE
T ss_pred EEECCCCeEE-----cCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCce
Confidence 3444555544 346779999999984 478999999531 1111100 00111223455443 1
Q ss_pred ceEEEeCCCCCCCCeEEEEEEEeCc---eeEEeEEEEEEEeee--------------cccccCCCCeeeecccCeEEEeC
Q psy12060 256 GNLIINDPRQVEDRGSYHCKASNKF---GSIISESVQLAFGFI--------------GEFNLKRAPEIGNQNWGKAMFCD 318 (978)
Q Consensus 256 ~~l~i~~~~~~~d~G~Y~C~a~n~~---g~~~s~~~~l~v~~~--------------~~~~~~~~~~~~~~~~~~~l~C~ 318 (978)
.+|.|.++ +.+|+|.|+|.|.|.. ....+..+.|.|... +.+...+....+.+|+.++|.|.
T Consensus 86 ~~L~I~~v-~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 164 (257)
T 3gkz_A 86 VYLQLKSV-SSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCS 164 (257)
T ss_dssp EEEEECSC-CGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEE
T ss_pred EEEEECCC-ChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEE
Confidence 26999998 9999999999999972 122344566766544 12222233456788999999999
Q ss_pred CCCCCCCc-eEEEeccc--ccccc----------cccceEEEeeC---CcEEEeeeeeecceeeEEEEEeecccccccCC
Q psy12060 319 PPTNYPGV-NYYWARDY--FPNFV----------EEDKRVFVSYD---GALYFSALEQIDAGNYSCNVQSKVSDTGRNGP 382 (978)
Q Consensus 319 ~~~~~p~~-~i~W~~~~--~~~~~----------~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~ 382 (978)
+.. .|.+ .+.|+|.. ..... ....++..... .+|.|.+++.+|+|.|+|.|.+...... ..
T Consensus 165 ~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~f--g~ 241 (257)
T 3gkz_A 165 ASS-SVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTF--GS 241 (257)
T ss_dssp ESS-CCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEE--CC
T ss_pred Ecc-CccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEE--cC
Confidence 854 5555 89999842 22110 00133333322 2599999999999999999987542211 22
Q ss_pred ceeEEEccCC
Q psy12060 383 FFPLKVFPHS 392 (978)
Q Consensus 383 ~~~l~V~~~~ 392 (978)
-..|.|...+
T Consensus 242 gt~l~v~~~~ 251 (257)
T 3gkz_A 242 GTKLEIKRAP 251 (257)
T ss_dssp CEEEEECCC-
T ss_pred CEEEEEEeCC
Confidence 2567776554
No 423
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.63 E-value=8.5e-16 Score=137.62 Aligned_cols=120 Identities=29% Similarity=0.459 Sum_probs=99.8
Q ss_pred eeeeEEEEEcCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeecc--ccCceEecccccceeeeecCCcee
Q psy12060 766 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKE 843 (978)
Q Consensus 766 ~s~~~~l~v~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~ 843 (978)
.+..+.+.+.++|.+|.++++..++.+++.|+|.+|.+++++|.+|.|+|+... ...|...... .....
T Consensus 5 ~s~~~~~~v~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~---------~~~~~ 75 (127)
T 1uey_A 5 SSGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV---------SGTQT 75 (127)
T ss_dssp CCCCCCCCCCCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEE---------ESSCC
T ss_pred CcEEEEEEeecCCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeee---------CCCce
Confidence 456677888899999999999999999999999999888899999999998754 4667654321 11222
Q ss_pred eEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeec
Q psy12060 844 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 895 (978)
Q Consensus 844 ~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~ 895 (978)
..+.+ |.|++.|.|||+|.|..|.|++|..+..++|.+.+|..+|.++++.
T Consensus 76 ~~i~~-L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~~ 126 (127)
T 1uey_A 76 TAQLN-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPSS 126 (127)
T ss_dssp EEEEC-CCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCCC
T ss_pred EEEec-CCCCCEEEEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEec
Confidence 35778 9999999999999999999999998667899999999999998764
No 424
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.63 E-value=4e-16 Score=140.64 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=90.7
Q ss_pred EEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeee
Q psy12060 860 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK 939 (978)
Q Consensus 860 v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~ 939 (978)
|+|.|..|.|++|.....++|.+++| .+|.++.+...+.++|.|+|++ |.+.||.|++|+|+|+..+...+......
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~ 79 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQP--PAAPNGIILAYQITHRLNTTTANTATVEV 79 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCC-CCCCCCEEEEECSSEEEEECCC--CSCCCSCCCEEEEEEEESSCCCSCCCEEE
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCC-CCCCceEEEecCCCEEEEEEcC--CCCCCCceEEEEEEEEECCCCCceEEEEE
Confidence 68999999999997544788888888 6899999999999999999998 45788999999999998764322211111
Q ss_pred eccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 940 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 940 ~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
...+. ..+.|.+|.|++.|.|+|+|.|.+|.|++|+
T Consensus 80 ~~~~~--~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 115 (130)
T 1wfo_A 80 LAPSA--RQYTATGLKPESVYLFRITAQTRKGWGEAAE 115 (130)
T ss_dssp ECTTC--CEEEEESCCSSSEEEEEEEEECSSCEEEEEE
T ss_pred eCCCc--eEEEEcCCCCCCEEEEEEEEEeCCcCCCCcc
Confidence 11222 3477899999999999999999999999875
No 425
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.63 E-value=4e-15 Score=148.28 Aligned_cols=170 Identities=16% Similarity=0.186 Sum_probs=112.7
Q ss_pred cceeecCCCeEEEEEee-ccCC-CCeeEEeeCC--EEe------------cCCCcEEEeecC---cEEEccccCCCCEEE
Q psy12060 596 SETYAGEGGNVTIFCNP-EAAP-KPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSGIY 656 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~-~~~p-~~~i~W~~~g--~~~------------~~~~~~~~~~~~---~l~i~~~~~~d~G~Y 656 (978)
....+.+|++++|.|.+ .+.+ .+.+.|+|++ ..+ ....++.+...+ +|.|.+++.+|+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (216)
T 2xzc_L 8 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADY 87 (216)
T ss_dssp SEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEE
Confidence 34568899999999995 4443 5799999843 211 012355444333 699999999999999
Q ss_pred EEEEEeCCc--eeeeeEEEEEEe---CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccccccc
Q psy12060 657 SCTATNVHG--MDESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 731 (978)
Q Consensus 657 ~C~a~n~~g--~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~ 731 (978)
+|.|.|..+ .......|.|.. +|.+....+. .....|+.++|.|.+.+.+++.+.+.|+++|..+........
T Consensus 88 ~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~- 165 (216)
T 2xzc_L 88 YCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPS-DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESV- 165 (216)
T ss_dssp EEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEE-
T ss_pred EEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCC-hhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEec-
Confidence 999999876 222345666643 3333322222 222358899999999996655567899999998754300000
Q ss_pred CCeeecC-----CceEEEeccCCCCCEEEEEEEEcCCCcee
Q psy12060 732 TPNINID-----GGLLEITNASFADAGEYECVVKSTVGKIS 767 (978)
Q Consensus 732 ~~~~~~~-----~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s 767 (978)
......+ .+.|.|..+..+|+|.|+|.|.|......
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 166 TEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred CcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 0000111 13789999999999999999999876543
No 426
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.63 E-value=4.4e-15 Score=152.08 Aligned_cols=192 Identities=13% Similarity=0.073 Sum_probs=117.3
Q ss_pred eeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEccc--cccccccc---ccCCCCCCceEe------ecceEE
Q psy12060 191 YFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDY--VQDRLVAN---LIDPLSDKRFTL------SGGNLI 259 (978)
Q Consensus 191 ~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~--~~~~~~~~---~~~~~~~~~~~~------~~~~l~ 259 (978)
.++..|.+..+. +|++++|.|.+.+.|.+.+.|||... ....+... ........++.. ...+|.
T Consensus 5 ~v~q~p~~~~v~-----~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 79 (256)
T 3tf7_C 5 SVTQPDARVTVS-----EGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLR 79 (256)
T ss_dssp EEECSCSEEEEE-----TTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEE
T ss_pred EEEecCceEEec-----CCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEE
Confidence 345556666544 46679999999999999999999531 11111000 000011233333 134799
Q ss_pred EeCCCCCCCCeEEEEEEEeCcee---EEeEEEEEEEee--------------------ecccccCCCCeeeecccCeEEE
Q psy12060 260 INDPRQVEDRGSYHCKASNKFGS---IISESVQLAFGF--------------------IGEFNLKRAPEIGNQNWGKAMF 316 (978)
Q Consensus 260 i~~~~~~~d~G~Y~C~a~n~~g~---~~s~~~~l~v~~--------------------~~~~~~~~~~~~~~~~~~~~l~ 316 (978)
|.++ +.+|+|.|+|.|.|..+. .....+.|.|.. .+.+...+....+.+|+.++|.
T Consensus 80 I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~ 158 (256)
T 3tf7_C 80 KASV-HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLS 158 (256)
T ss_dssp ESSC-CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEEC
T ss_pred ECCC-CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEE
Confidence 9998 899999999999997641 223345566653 2223333344466789999999
Q ss_pred eCCCCCCCCceEEEecccccccc---c------------ccceEEEee----CCcEEEeeeeeecceeeEEEEEeecccc
Q psy12060 317 CDPPTNYPGVNYYWARDYFPNFV---E------------EDKRVFVSY----DGALYFSALEQIDAGNYSCNVQSKVSDT 377 (978)
Q Consensus 317 C~~~~~~p~~~i~W~~~~~~~~~---~------------~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~~~~ 377 (978)
|.+... .+.+.|+|....... . ...++.+.. ..+|.|.+++.+|+|.|+|.|.|..+..
T Consensus 159 C~~~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~ 236 (256)
T 3tf7_C 159 CRQTNS--HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQL 236 (256)
T ss_dssp EEECSC--CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEE
T ss_pred EEcCCC--ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCcc
Confidence 998543 568999984321100 0 012222221 2369999999999999999999986533
Q ss_pred cccCCceeEEEccC
Q psy12060 378 GRNGPFFPLKVFPH 391 (978)
Q Consensus 378 ~~~~~~~~l~V~~~ 391 (978)
... .-..|.|...
T Consensus 237 ~fG-~gt~l~v~~~ 249 (256)
T 3tf7_C 237 YFG-EGSKLTVLEL 249 (256)
T ss_dssp EEC-CCEEEEEECG
T ss_pred EEC-CCeEEEEEcc
Confidence 222 2246666643
No 427
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.62 E-value=2e-15 Score=151.29 Aligned_cols=182 Identities=16% Similarity=0.224 Sum_probs=115.8
Q ss_pred ceeecCCCeEEEEEeeccCC--CCeeEEeeCC--EE---e---c-----------CCCcEEEee-----cCcEEEccccC
Q psy12060 597 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG--NI---I---G-----------SGGRRKIFE-----NGNLLISPVSR 650 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~g--~~---~---~-----------~~~~~~~~~-----~~~l~i~~~~~ 650 (978)
...+.+|++++|.|.+.+.+ .+.+.|+|.+ .. + . ...++.+.. +.+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (227)
T 1mju_H 9 AELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTS 88 (227)
T ss_dssp EEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCc
Confidence 34578999999999999876 6799999853 21 1 0 124555543 23699999999
Q ss_pred CCCEEEEEEEEeCCcee-eeeEEEEEEe----CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccc
Q psy12060 651 DDSGIYSCTATNVHGMD-ESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 725 (978)
Q Consensus 651 ~d~G~Y~C~a~n~~g~~-~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~ 725 (978)
+|+|.|.|.+.|..+.. .....|.|.. +|.+.... +...+..|+.++|.|.+.+..+..+.+.|++++..+...
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~ 167 (227)
T 1mju_H 89 DDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLA-PVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVH 167 (227)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEEC-CCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred ccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEec-CCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcE
Confidence 99999999999864321 2335677764 23333222 223456799999999999874444678999998765311
Q ss_pred cccc-ccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEEEEcCCCCCC
Q psy12060 726 DLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 781 (978)
Q Consensus 726 ~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~v~~~P~~P 781 (978)
.... .....+ ...+.|.|.....+| |.|+|.|.|..+.......+.+.++|.+|
T Consensus 168 ~~~~~~~~g~~-~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 168 TFPAVLQSDLY-TLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 222 (227)
T ss_dssp ECCCEEETTEE-EEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC----
T ss_pred ECCceecCCeE-EEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCC
Confidence 1000 000111 123478888888877 99999999988877777777777777655
No 428
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.62 E-value=4.7e-15 Score=152.21 Aligned_cols=172 Identities=18% Similarity=0.247 Sum_probs=107.9
Q ss_pred CCeeeecccCeEEEeCCCCCC-CCceEEEecccc--cccc----------cccceEEEeeCC---cEEEeeeeeecceee
Q psy12060 303 APEIGNQNWGKAMFCDPPTNY-PGVNYYWARDYF--PNFV----------EEDKRVFVSYDG---ALYFSALEQIDAGNY 366 (978)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~~-p~~~i~W~~~~~--~~~~----------~~~~~~~~~~~~---~L~i~~~~~~d~G~Y 366 (978)
....+.+|+.++|.|.+.... |.+.+.|+|+.. .... ....++.+..++ +|.|.+++.+|+|.|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 345778899999999985432 678899999531 1100 012344444333 699999999999999
Q ss_pred EEEEEeecccccccCCceeEEEccCCCcccc----c--------cCCCCCCCCCCCCCCCCcEEEEEEEeecC--CCeeE
Q psy12060 367 SCNVQSKVSDTGRNGPFFPLKVFPHSNFQQL----K--------FPNNFPKTFPEAPKAGDKVRLECVAFGYP--VPSYN 432 (978)
Q Consensus 367 ~C~~~n~~~~~~~~~~~~~l~V~~~~~~~~~----~--------~~~~~~~~~~~~v~~G~~~~l~C~~~g~p--~~~v~ 432 (978)
+|.+.+..+..........|.|...+..... . .+..+.......+.+|++++|.|.+.+.+ .+.+.
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 169 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMS 169 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEE
Confidence 9999986543223334467888765421100 0 00000001123467999999999999866 67999
Q ss_pred EEEcC--ccCC------CC-----------cee--e----ecccEEEeCCCCCCCCeEEEEEEEeCC
Q psy12060 433 WTRRG--SPLP------RN-----------AYF--E----NFNRILTIPNVKVEDQGEYICRASNDR 474 (978)
Q Consensus 433 W~~~~--~~l~------~~-----------~~~--~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 474 (978)
|+|++ ..+. .. .++ . ....+|.|.+++.+|+|.|+|.|.|..
T Consensus 170 W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 170 WVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 99973 2210 00 011 1 123459999999999999999999864
No 429
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=2.5e-15 Score=132.74 Aligned_cols=105 Identities=24% Similarity=0.342 Sum_probs=83.9
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeE
Q psy12060 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946 (978)
Q Consensus 867 G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~ 946 (978)
|.|++|... .+.|.++.|+.+|.++++...+.++|.|+|++|+. |.|++|+|+|+..+.............+.
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~----g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-- 73 (119)
T 2ee2_A 1 GSSGSSGVA-VINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLE----KIVESYQIRYWAAHDKEEAANRVQVTSQE-- 73 (119)
T ss_dssp CCCCCSSCC-CCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCSC----TTCCEEEEEEEESSSCGGGCEEEEEETTC--
T ss_pred CCCCCCCCE-EEECCCcCCCCCCCcEEEEEccCCEEEEEecCCCC----CccceEEEEEEECCCcccCcEEEEcCCCE--
Confidence 778888876 78899999999999999999999999999999543 88999999998876432221122222222
Q ss_pred EEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 947 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 947 ~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
..+.|.+|.|++.|.|+|+|+|.+|.|++|++
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 105 (119)
T 2ee2_A 74 YSARLENLLPDTQYFIEVGACNSAGCGPPSDM 105 (119)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCccCCCCCC
Confidence 34679999999999999999999999999963
No 430
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.62 E-value=1.5e-16 Score=160.86 Aligned_cols=180 Identities=18% Similarity=0.238 Sum_probs=95.5
Q ss_pred CeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcccc--ccccccc--ccCCCCCCceEe----ecceEEEe
Q psy12060 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKEDYV--QDRLVAN--LIDPLSDKRFTL----SGGNLIIN 261 (978)
Q Consensus 190 P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~--~~~~~~~--~~~~~~~~~~~~----~~~~l~i~ 261 (978)
+.+...|.+..+ .+|++++|.|.+.|.|.+.|.|||++.. +..+... ........++.. .+.+|.|.
T Consensus 24 ~~v~~~p~~~~v-----~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 98 (233)
T 3bqu_C 24 TTVTQSPASLSM-----SIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIE 98 (233)
T ss_dssp CCEEEECSBC------------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC--
T ss_pred eeEEEcCCeEEE-----ecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEEC
Confidence 344444655543 3567799999999988889999997531 1100000 000011223222 22379999
Q ss_pred CCCCCCCCeEEEEEEEeCceeEEeEEEEEEEee---ecccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccccc
Q psy12060 262 DPRQVEDRGSYHCKASNKFGSIISESVQLAFGF---IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPN 337 (978)
Q Consensus 262 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~~ 337 (978)
++ +.+|+|.|+|.|.|..+...+..+.|.|.. +|.+...........|+.++|.|.+.+..|++ .|+|+|+|.++
T Consensus 99 ~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 177 (233)
T 3bqu_C 99 NM-LSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 177 (233)
T ss_dssp ----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC----
T ss_pred CC-CHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeC
Confidence 97 899999999999987764333334455433 22222222222233578899999985545653 89999999764
Q ss_pred cccccceEEE--eeC------CcEEEeeeeeecceeeEEEEEeecc
Q psy12060 338 FVEEDKRVFV--SYD------GALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 338 ~~~~~~~~~~--~~~------~~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
.......... ..+ +.|.|..+..+|+|.|+|.|.|...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 178 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp -CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 3220000000 112 3588989999999999999999753
No 431
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.62 E-value=1.5e-15 Score=155.83 Aligned_cols=174 Identities=17% Similarity=0.299 Sum_probs=116.7
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC-----------------CCceee------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP-----------------RNAYFE------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~-----------------~~~~~~------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.+ .+.|.|+|.. ..+. ...++. ....+|.|.+++.+|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 92 (256)
T 3umt_A 13 LVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSED 92 (256)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCccc
Confidence 457999999999998865 6799999843 1110 001111 113459999999999
Q ss_pred CeEEEEEEEeC----CCceEEEEEEEEEe----------------eceeeccCCcccccCCCceeEEEEeecCCCCeeEE
Q psy12060 463 QGEYICRASND----RSALESSVTISIQA----------------EPNFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSW 522 (978)
Q Consensus 463 ~G~Y~C~a~n~----~g~~~~~~~l~V~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W 522 (978)
+|.|.|.+.+. .+.....+.|.|.. +|.+...+....+.+|++++|.|.+.+.+.+.+.|
T Consensus 93 sG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W 172 (256)
T 3umt_A 93 SAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSNLNW 172 (256)
T ss_dssp CEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEE
T ss_pred CEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEE
Confidence 99999999987 23334456777774 55666667777899999999999999988889999
Q ss_pred eEC--CEECC-----CCCCCCCCCCcEEEe----cCEEEEEeCCCCCCCeEEEEEEEcCCCceee-EEEEEEEE
Q psy12060 523 FRN--GELLN-----SETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLKTRYS-SAQLRVLT 584 (978)
Q Consensus 523 ~~~--g~~~~-----~~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~ 584 (978)
+|+ +..+. ..........++... ...|+|.++.. +|+|.|+|.+.|....... ...|.|..
T Consensus 173 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~~~~~~~~fg~gt~L~V~~ 245 (256)
T 3umt_A 173 LQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLES-EDFVDYYCLQYASSPPTFGGGTKLEIKR 245 (256)
T ss_dssp EEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCG-GGCSEEEEEECSSSSCEECCCEEEEEC-
T ss_pred EEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCCh-hHCEEEEEEEeeCCCcEECCCEEEEEEC
Confidence 984 22111 000000012344332 12599999997 9999999999986543322 34566654
No 432
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.62 E-value=1.3e-15 Score=155.46 Aligned_cols=162 Identities=19% Similarity=0.349 Sum_probs=111.9
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEc----------------CccCCCC---ceee-----ecccEEEeCCCCCCCCeE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRR----------------GSPLPRN---AYFE-----NFNRILTIPNVKVEDQGE 465 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~----------------~~~l~~~---~~~~-----~~~~~L~i~~~~~~d~G~ 465 (978)
.+.+|++++|.|.+.+.+.+.|.|+|. +..+... .++. ....+|.|.+++.+|+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~ 91 (246)
T 4dzb_B 12 ISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSF 91 (246)
T ss_dssp EEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGCEE
T ss_pred EEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHCEE
Confidence 456999999999999999999999992 2222111 1111 123479999999999999
Q ss_pred EEEEEEeCCC----ceEEEEEEEEEe------eceeec-cCCcccccCCCceeEEEEeecCCCC--eeEEeECCEECCCC
Q psy12060 466 YICRASNDRS----ALESSVTISIQA------EPNFTI-PLTDKHMDNQADLTWTCEAFGVPDV--TYSWFRNGELLNSE 532 (978)
Q Consensus 466 Y~C~a~n~~g----~~~~~~~l~V~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~--~i~W~~~g~~~~~~ 532 (978)
|.|.+.+..+ .....+.|.|.. +|.+.. .+....+.+|+.++|.|.+.|.+++ .++|+|+|..+...
T Consensus 92 Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 171 (246)
T 4dzb_B 92 YICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG 171 (246)
T ss_dssp EEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred EEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCC
Confidence 9999997643 222345677764 555543 4444556779999999999986544 89999999988643
Q ss_pred CCCCC---------CCCcEEEecCEEEEEeCCCCCC-CeEEEEEEEcCCCc
Q psy12060 533 TLPLE---------DQDRYFIQDNVLTIRYLNPERD-PAMYQCRAKNQLKT 573 (978)
Q Consensus 533 ~~~~~---------~~~~~~~~~~~l~i~~~~~~~d-~G~Y~C~a~n~~g~ 573 (978)
..... ....+. ....|.|..... +| +|.|+|.|.|....
T Consensus 172 ~~~~~~~~~~~~~~~~g~~~-~~s~l~i~~~~~-~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 172 VCTDPQPLKEQPALNDSRYA-LSSRLRVSATFW-QNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp EEECSSCEESSTTSTTCCEE-EEEEEEEEHHHH-TCTTCEEEEEEEECCBC
T ss_pred cccccccccccccCCCCCEE-EEEEEEECHHHh-ccCCCeEEEEEEecCCC
Confidence 11000 122222 234588887765 56 99999999987544
No 433
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=2.7e-15 Score=136.15 Aligned_cols=109 Identities=23% Similarity=0.335 Sum_probs=89.3
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeee-cccee
Q psy12060 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE-YGNVG 945 (978)
Q Consensus 867 G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~-~~~~~ 945 (978)
|.|++|... .++|.+++|+.+|.++++...+.++|.|+|++|+....||.|++|+|+|+..+...+....+.. ..+.
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~- 78 (134)
T 2edx_A 1 GSSGSSGTI-EARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREH- 78 (134)
T ss_dssp CCCCCCCCC-CCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTC-
T ss_pred CCCCCcCCE-EEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCc-
Confidence 778888876 7889999998899999999999999999999966588999999999999987754433222221 1222
Q ss_pred EEEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 946 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 946 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
..+.|.+|.|++.|.|+|+|+|.+|.|++|++
T Consensus 79 -~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 110 (134)
T 2edx_A 79 -SSWDLVGLEKWTEYRVWVRAHTDVGPGPESSP 110 (134)
T ss_dssp -SEEEEESCCTTCEEEEEEEEEETTBCCCCCCC
T ss_pred -cEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCC
Confidence 34678999999999999999999999999863
No 434
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.62 E-value=5.1e-15 Score=152.12 Aligned_cols=178 Identities=14% Similarity=0.199 Sum_probs=104.6
Q ss_pred CeeEeCCCceEecCCCccccCcEEEEEEeecCCCCeEEEEEcc--cccccccccc-------cCCC-CCCceE-----ee
Q psy12060 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYPNPSYEWFKED--YVQDRLVANL-------IDPL-SDKRFT-----LS 254 (978)
Q Consensus 190 P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~--~~~~~~~~~~-------~~~~-~~~~~~-----~~ 254 (978)
|.+...|.+..+. +|++++|.|.+.+.|.+.+.|||.. .....+.... .... ...+.. ..
T Consensus 3 ~~v~~~p~~~~v~-----~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 77 (259)
T 3omz_A 3 SNLEGRTKSVIRQ-----TGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRK 77 (259)
T ss_dssp --------CEEEE-----TTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--C
T ss_pred cccccCCceeEec-----CCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCC
Confidence 4455556666544 4667999999999999999999942 1111110000 0010 111221 12
Q ss_pred cceEEEeCCCCCCCCeEEEEEEEeCcee--EEeEEEEEEEeee-----------------cccccCCCCeeeecccCeEE
Q psy12060 255 GGNLIINDPRQVEDRGSYHCKASNKFGS--IISESVQLAFGFI-----------------GEFNLKRAPEIGNQNWGKAM 315 (978)
Q Consensus 255 ~~~l~i~~~~~~~d~G~Y~C~a~n~~g~--~~s~~~~l~v~~~-----------------~~~~~~~~~~~~~~~~~~~l 315 (978)
..+|.|.++ +.+|+|.|+|.+.|..+. .....+.|.|... +.+...+....+.+|+.++|
T Consensus 78 ~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L 156 (259)
T 3omz_A 78 NLRMILRNL-IENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTL 156 (259)
T ss_dssp CCEEEESSC-CGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEE
T ss_pred eEEEEECCC-CcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEE
Confidence 347999998 999999999999997652 3344566666543 12233344567889999999
Q ss_pred EeCCCCCCCCceEEEecccccccc------------cccceEEEee-----CCcEEEeeeeeecceeeEEEEEee
Q psy12060 316 FCDPPTNYPGVNYYWARDYFPNFV------------EEDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQSK 373 (978)
Q Consensus 316 ~C~~~~~~p~~~i~W~~~~~~~~~------------~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~~~n~ 373 (978)
.|.+....|.+.+.|+|.+..... ....++.+.. ...|.|.+++.+|+|.|+|.+.+.
T Consensus 157 ~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 157 NCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp CCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred EEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 998754457889999985421100 1123444442 235999999999999999999753
No 435
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.62 E-value=3.5e-15 Score=148.79 Aligned_cols=163 Identities=17% Similarity=0.288 Sum_probs=111.8
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcCc--c---CC--------------CCceee------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRGS--P---LP--------------RNAYFE------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~~--~---l~--------------~~~~~~------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.+ .+.|.|+|... . +. ...++. ....+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (220)
T 2fbj_H 11 LVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSED 90 (220)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChhh
Confidence 557999999999998765 57899999641 1 10 011221 123589999999999
Q ss_pred CeEEEEEEEeCCCc---eEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CC--CeeEEeECCEECCC-
Q psy12060 463 QGEYICRASNDRSA---LESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PD--VTYSWFRNGELLNS- 531 (978)
Q Consensus 463 ~G~Y~C~a~n~~g~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--~~i~W~~~g~~~~~- 531 (978)
+|.|.|.+.+..+. ....+.|.|.. +|.+...+ ...+..|+.++|.|.+.+. |. +.|.|++++..+..
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~ 169 (220)
T 2fbj_H 91 TALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTV 169 (220)
T ss_dssp CEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEE
T ss_pred CEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceE
Confidence 99999999987543 12345777764 45555444 3456899999999999986 65 79999999876521
Q ss_pred -CCCCCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCcee
Q psy12060 532 -ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 575 (978)
Q Consensus 532 -~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~ 575 (978)
..........+.. ...|.|..... +|.|.|+|.|.|..+...
T Consensus 170 ~~~~~~~~~g~~~~-~s~L~i~~~~~-~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 170 NFPPALASGGRYTM-SNQLTLPAVEC-PEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp ECCCEECSSSCEEE-EEEEEECGGGS-CTTCEEEEEEEETTSCCE
T ss_pred ecCceECCCCCEEE-EEEEEECHHHc-CCCCeEEEEEEcCCCceE
Confidence 0000011222322 23688877765 789999999999887643
No 436
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.62 E-value=5.6e-15 Score=150.70 Aligned_cols=176 Identities=19% Similarity=0.247 Sum_probs=112.9
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecCC-----CCeEEEEEccc--cccccccc--ccCCCCCCceEee----cceE
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGYP-----NPSYEWFKEDY--VQDRLVAN--LIDPLSDKRFTLS----GGNL 258 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p-----~~~v~W~~~~~--~~~~~~~~--~~~~~~~~~~~~~----~~~l 258 (978)
++..|.+..+. +|++++|.|.+.+.| .+.+.|||++. .+..+... ...+....|+... ..+|
T Consensus 4 v~~~p~~~~v~-----~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L 78 (247)
T 1svz_A 4 MTQTPLYLPVS-----LGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTL 78 (247)
T ss_dssp EEEECSEEEEC-----TTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEE
T ss_pred EEecCCeEEec-----CCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEE
Confidence 44456666654 466799999999888 68999999642 11111000 0011113444432 2379
Q ss_pred EEeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeec------------c-cccCCCCeeeecccCeEEEeCCCCCC-C
Q psy12060 259 IINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG------------E-FNLKRAPEIGNQNWGKAMFCDPPTNY-P 324 (978)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~------------~-~~~~~~~~~~~~~~~~~l~C~~~~~~-p 324 (978)
.|.++ +.+|+|.|+|.|.|..+...+..+.|.|..++ . .........+.+|+.++|.|.+.... +
T Consensus 79 ~I~~v-~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 157 (247)
T 1svz_A 79 KISRV-EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFT 157 (247)
T ss_dssp EESSC-CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGG
T ss_pred EECCC-CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccC
Confidence 99998 89999999999999866544445667765542 1 11223445678899999999984432 3
Q ss_pred CceEEEecccc--ccc-c--------------cccceEEEeeC-----CcEEEeeeeeecceeeEEEEEee
Q psy12060 325 GVNYYWARDYF--PNF-V--------------EEDKRVFVSYD-----GALYFSALEQIDAGNYSCNVQSK 373 (978)
Q Consensus 325 ~~~i~W~~~~~--~~~-~--------------~~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~~~n~ 373 (978)
.+.+.|+|++. ... + ....++.+..+ ++|.|.+++.+|+|.|+|.|.|.
T Consensus 158 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 158 DYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp GSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 57899999742 110 0 01345544432 37999999999999999999985
No 437
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.62 E-value=1.5e-15 Score=152.12 Aligned_cols=162 Identities=19% Similarity=0.317 Sum_probs=109.9
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC-----------------CCceee------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP-----------------RNAYFE------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~-----------------~~~~~~------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.| .+.|.|+|++ ..+. ...++. .....|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (225)
T 1op3_H 11 LVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVED 90 (225)
T ss_dssp EEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChhh
Confidence 457999999999998876 6789999864 2110 011221 123589999999999
Q ss_pred CeEEEEEEEeCCC-----c---eEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEE
Q psy12060 463 QGEYICRASNDRS-----A---LESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGEL 528 (978)
Q Consensus 463 ~G~Y~C~a~n~~g-----~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~ 528 (978)
+|.|.|.+.+..| . ....+.|.|.. +|.+........+.+|+.++|.|.+.|. |.+ .|.|++++..
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 170 (225)
T 1op3_H 91 TAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 170 (225)
T ss_dssp CEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTTSCC
T ss_pred CEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecCCCc
Confidence 9999999999764 2 11346788875 3555432222246789999999999986 765 9999999876
Q ss_pred CCCCCCC--CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCce
Q psy12060 529 LNSETLP--LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574 (978)
Q Consensus 529 ~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~ 574 (978)
+...... ....+.+. ....|.|..+.. +| |.|+|.|.|..+..
T Consensus 171 ~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~-~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 171 SGVHTFPAVLQSSGLYS-LSSVVTVPSSSL-GT-QTYICNVNHKPSNT 215 (225)
T ss_dssp TTCEECCCEECTTSCEE-EEEEEEEEGGGT-TC-CCCCEEEEEGGGTE
T ss_pred CCeEecCceeCCCCCEE-EEEEEEEechhc-CC-CcEEEEEEcCCCCc
Confidence 4211000 01122222 234688988875 67 99999999976543
No 438
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.61 E-value=7.2e-15 Score=152.83 Aligned_cols=190 Identities=17% Similarity=0.191 Sum_probs=117.0
Q ss_pred EeCCCceEecCCCccccCcEEEEEEeecCC--CCeEEEEEcccc--ccccccc-------ccCCCCCCceEee------c
Q psy12060 193 IKQPTDVVFDLSKRSILNDITLSCYAGGYP--NPSYEWFKEDYV--QDRLVAN-------LIDPLSDKRFTLS------G 255 (978)
Q Consensus 193 ~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~v~W~~~~~~--~~~~~~~-------~~~~~~~~~~~~~------~ 255 (978)
+.+|....+. +|++++|.|.+.|.| .+.+.|||++.. +..+... ........|+.+. .
T Consensus 30 ~~~p~~~~v~-----~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 104 (282)
T 1qok_A 30 LQQSGAELVR-----SGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNT 104 (282)
T ss_dssp EEECCCEEEE-----TTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTE
T ss_pred EECCCCEEEe-----CCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCe
Confidence 4456666543 466799999999885 589999997521 1100000 0111123455443 2
Q ss_pred ceEEEeCCCCCCCCeEEEEEEEeCce---e-EEeEEEEEEEeeec-------------c--cccCCCCeeeecccCeEEE
Q psy12060 256 GNLIINDPRQVEDRGSYHCKASNKFG---S-IISESVQLAFGFIG-------------E--FNLKRAPEIGNQNWGKAMF 316 (978)
Q Consensus 256 ~~l~i~~~~~~~d~G~Y~C~a~n~~g---~-~~s~~~~l~v~~~~-------------~--~~~~~~~~~~~~~~~~~l~ 316 (978)
.+|.|.++ +.+|+|.|+|.|.|..| . .....+.|.|...+ . +...+....+.+|+.++|.
T Consensus 105 ~sL~I~~v-~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~ 183 (282)
T 1qok_A 105 AYLQLSSL-TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTIT 183 (282)
T ss_dssp EEEEECSC-CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEE
T ss_pred EEEEECcC-ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEE
Confidence 47999998 89999999999999876 1 22344566665432 1 1112233457789999999
Q ss_pred eCCCCCCCCceEEEec--ccccccc----------cccceEEEee---CCcEEEeeeeeecceeeEEEEEeecccccccC
Q psy12060 317 CDPPTNYPGVNYYWAR--DYFPNFV----------EEDKRVFVSY---DGALYFSALEQIDAGNYSCNVQSKVSDTGRNG 381 (978)
Q Consensus 317 C~~~~~~p~~~i~W~~--~~~~~~~----------~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 381 (978)
|.+ .+.| +.+.|+| +|..... ....++.... .++|.|.+++.+|+|.|+|.|.+..... -.
T Consensus 184 C~~-~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~--fg 259 (282)
T 1qok_A 184 CSA-SSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLT--FG 259 (282)
T ss_dssp EEE-SSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCE--EC
T ss_pred EEe-cCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCce--Ee
Confidence 998 4556 7999999 5544210 0123444332 2369999999999999999998753211 12
Q ss_pred CceeEEEccCC
Q psy12060 382 PFFPLKVFPHS 392 (978)
Q Consensus 382 ~~~~l~V~~~~ 392 (978)
.-..|.|....
T Consensus 260 ~gt~l~V~~~~ 270 (282)
T 1qok_A 260 AGTKLELKRAA 270 (282)
T ss_dssp CCEEEEEC---
T ss_pred CCEEEEEeccc
Confidence 23567776443
No 439
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.61 E-value=8.8e-15 Score=151.72 Aligned_cols=185 Identities=16% Similarity=0.190 Sum_probs=118.6
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEeeCCE-----Eec---------CCCcEEEeecC---cEEEccccCCCCEEEEEE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN-----IIG---------SGGRRKIFENG---NLLISPVSRDDSGIYSCT 659 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~-----~~~---------~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~ 659 (978)
.+.+.+|++++|.|.+.+.|.+.+.|+|++. .+. ...++.+..++ +|.|.+++.+|+|.|+|.
T Consensus 21 ~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 100 (276)
T 3auv_A 21 SLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ 100 (276)
T ss_dssp EEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEE
Confidence 4457899999999999999989999998531 121 13455554333 699999999999999999
Q ss_pred EEeCCce-eeeeEEEEEEeCC-------------ceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCC--EEc-
Q psy12060 660 ATNVHGM-DESKGRLIVLHGP-------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRI- 722 (978)
Q Consensus 660 a~n~~g~-~~~~~~l~v~~~p-------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g--~~~- 722 (978)
|.|..+. ......|.|...| .+....+....+..|+.++|.|.+.+.+++...+.|++++ ..+
T Consensus 101 ~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~ 180 (276)
T 3auv_A 101 QHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLE 180 (276)
T ss_dssp ECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEE
T ss_pred EecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcE
Confidence 9997654 2233566666543 2222334567888999999999999877544577999863 111
Q ss_pred --ccccc-------ccccCCeeec------CCceEEEeccCCCCCEEEEEEEEcCC---Cc--eeeeEEEEEcCCCCCC
Q psy12060 723 --GNMDL-------NELETPNINI------DGGLLEITNASFADAGEYECVVKSTV---GK--ISTKTTVIVEGPPGLP 781 (978)
Q Consensus 723 --~~~~~-------~~~~~~~~~~------~~~~l~i~~~~~~d~g~Y~c~a~n~~---G~--~s~~~~l~v~~~P~~P 781 (978)
..... ......++.. ....|.|.++..+|+|.|+|.|.|.. +. ......|.|...|..+
T Consensus 181 ~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~~~~~ 259 (276)
T 3auv_A 181 WVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASAAA 259 (276)
T ss_dssp EEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC------
T ss_pred EEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEccccccc
Confidence 00000 0000122221 12389999999999999999999983 22 2234677776655544
No 440
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.61 E-value=1.2e-14 Score=146.51 Aligned_cols=207 Identities=15% Similarity=0.138 Sum_probs=137.2
Q ss_pred ccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEE
Q psy12060 693 AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772 (978)
Q Consensus 693 ~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l 772 (978)
....+.|.|.....+...+.+.|...+..-.. ..........+.|.++.....+.+++.|.|..|....+..+
T Consensus 18 ~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~-------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~ 90 (234)
T 3f7q_A 18 GSRKIHFNWLPPSGKPMGYRVKYWIQGDSESE-------AHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLV 90 (234)
T ss_dssp SSSCEEEEEECCSSCCCEEEEEEEETTSCGGG-------CEEEEESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCE
T ss_pred CCCEEEEEEECCCCccceEEEEEEECCCCccc-------eEEEcCCccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeE
Confidence 44578899987643444566666654422111 12223455688999998888888888999988865443333
Q ss_pred EE---cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCc-----eEecccccceeeeecCCceee
Q psy12060 773 IV---EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-----FNVSEHVIGKEVDRYTGRKEA 844 (978)
Q Consensus 773 ~v---~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w-----~~~~~~~~~~~~~~~~~~~~~ 844 (978)
.+ ..+|.+|.++++...+.+++.|+|.+|.+.++.|.+|.|+|+......+ ..... .......+
T Consensus 91 ~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 162 (234)
T 3f7q_A 91 SCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLV--------DNPKNRML 162 (234)
T ss_dssp EEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEECCC--------SCTTCCEE
T ss_pred EEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceEEEe--------cCCcceEE
Confidence 33 3567888999999999999999999998888899999999997654332 21111 01234678
Q ss_pred EEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEE
Q psy12060 845 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 924 (978)
Q Consensus 845 ~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~ 924 (978)
++.+ |.|++.|.|+|+|.|..|.|++|.....++|.+..|..+|....+... ....|..+++|.++
T Consensus 163 ~i~~-L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~~P~~~~~~i~-------------~~~~g~~~~~~~~~ 228 (234)
T 3f7q_A 163 LIEN-LRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIV-------------DAQSGEDYDSFLMY 228 (234)
T ss_dssp EEEC-CCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCCCCCCTTCCEE-------------ETTC----------
T ss_pred EeCC-CCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCCCccccceeeE-------------EcccCcchheeeee
Confidence 9999 999999999999999999999987544788999999888866544211 23456778999998
Q ss_pred EEec
Q psy12060 925 WRKK 928 (978)
Q Consensus 925 ~~~~ 928 (978)
+++.
T Consensus 229 ~~~~ 232 (234)
T 3f7q_A 229 SDDV 232 (234)
T ss_dssp ----
T ss_pred hhhh
Confidence 8753
No 441
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.61 E-value=1.2e-14 Score=145.23 Aligned_cols=168 Identities=17% Similarity=0.328 Sum_probs=111.6
Q ss_pred CCCCCCCcEEEEEEEeecC--CCeeEEEEcCc--cCC-----------------CCceeee------cccEEEeCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYP--VPSYNWTRRGS--PLP-----------------RNAYFEN------FNRILTIPNVKVE 461 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p--~~~v~W~~~~~--~l~-----------------~~~~~~~------~~~~L~i~~~~~~ 461 (978)
..+.+|++++|.|.+.+.+ .+.+.|+|++. .+. ...++.. ....|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (223)
T 1dee_B 10 GVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 89 (223)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHH
Confidence 3567999999999998765 47899999641 110 0112211 1347999999999
Q ss_pred CCeEEEEEEEeCCC---c---eEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeE-CCEE
Q psy12060 462 DQGEYICRASNDRS---A---LESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFR-NGEL 528 (978)
Q Consensus 462 d~G~Y~C~a~n~~g---~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~-~g~~ 528 (978)
|+|.|.|.+.+..| . ....+.|.|.. +|.+........+.+|+.++|.|.+.+. |.+ .|.|++ +|..
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~ 169 (223)
T 1dee_B 90 DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSD 169 (223)
T ss_dssp GCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCB
T ss_pred HCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCc
Confidence 99999999998753 1 11335777863 4555432222346789999999999987 766 999999 9988
Q ss_pred CCCCC-CC-CCCCCcEEEecCEEEEEeCCC-CCCCeEEEEEEEcCCCceeeE
Q psy12060 529 LNSET-LP-LEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAKNQLKTRYSS 577 (978)
Q Consensus 529 ~~~~~-~~-~~~~~~~~~~~~~l~i~~~~~-~~d~G~Y~C~a~n~~g~~~~~ 577 (978)
+.... .. ......+. ....|.|..... .+|.|.|+|.|.|..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 170 ISSTRGFPSVLRGGKYA-ATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp CSCEEECCCEEETTEEE-EEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred cceeEECCccccCCeEE-EEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 75310 00 00112332 234677766541 157899999999998865443
No 442
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.61 E-value=5.5e-15 Score=153.74 Aligned_cols=173 Identities=20% Similarity=0.311 Sum_probs=115.6
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcCc--cCC-----------------CCceee--e----cccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRGS--PLP-----------------RNAYFE--N----FNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~~--~l~-----------------~~~~~~--~----~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.| .+.|.|+|++. .+. ...++. . ...+|.|.+++.+|
T Consensus 37 ~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 116 (282)
T 1qok_A 37 LVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSED 116 (282)
T ss_dssp EEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhh
Confidence 557999999999998875 57999999642 110 001111 1 23579999999999
Q ss_pred CeEEEEEEEeCCC---ce--EEEEEEEEEeec---------------eeeccCCcccccCCCceeEEEEeecCCCCeeEE
Q psy12060 463 QGEYICRASNDRS---AL--ESSVTISIQAEP---------------NFTIPLTDKHMDNQADLTWTCEAFGVPDVTYSW 522 (978)
Q Consensus 463 ~G~Y~C~a~n~~g---~~--~~~~~l~V~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W 522 (978)
+|.|.|.+.|..| .. ...+.|.|..+| .+...+....+.+|++++|.|.+.+.+ +.+.|
T Consensus 117 sG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W 195 (282)
T 1qok_A 117 TAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-SYMHW 195 (282)
T ss_dssp CEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCEE
T ss_pred CEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEE
Confidence 9999999999876 11 134577777643 344456666789999999999999888 89999
Q ss_pred eE--CCEECCC-----CCCCCCCCCcEEEe----cCEEEEEeCCCCCCCeEEEEEEEcCCCce-eeEEEEEEEE
Q psy12060 523 FR--NGELLNS-----ETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLKTR-YSSAQLRVLT 584 (978)
Q Consensus 523 ~~--~g~~~~~-----~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 584 (978)
+| +|..+.. .........++... ...|+|.++.. +|+|.|+|.|.+..... .....|.|..
T Consensus 196 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 196 FQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEA-EDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred EEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCCh-hHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 99 5654310 00000012344332 23799999996 99999999999754322 2234555543
No 443
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.61 E-value=1.1e-15 Score=153.79 Aligned_cols=162 Identities=14% Similarity=0.191 Sum_probs=110.0
Q ss_pred CCCCCcEEEEEEEeec---CCC-eeEEEEcCccCCCCce-----e----eecccEEEeCCCCCCCCeEEEEEEEeCCCce
Q psy12060 411 PKAGDKVRLECVAFGY---PVP-SYNWTRRGSPLPRNAY-----F----ENFNRILTIPNVKVEDQGEYICRASNDRSAL 477 (978)
Q Consensus 411 v~~G~~~~l~C~~~g~---p~~-~v~W~~~~~~l~~~~~-----~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 477 (978)
+.+|++++|.|.+.|. |.+ .|+|+|++..+..... . ......|.|.+++.+|+|.|+|.|.|..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 5689999999999987 776 9999999877653211 0 0123479999999999999999999987753
Q ss_pred --EEEEEE--EEEeeceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCCCCCC--CCCCcEEEecCEE
Q psy12060 478 --ESSVTI--SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSETLPL--EDQDRYFIQDNVL 549 (978)
Q Consensus 478 --~~~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~~--~~~~~~~~~~~~l 549 (978)
...+.+ .+..+|.+.+.+.......|+.++|.|.+.|. |. +.|+|+|||..+....... ...+........|
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l 188 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKL 188 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEE
T ss_pred CcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEE
Confidence 333333 45567877665444334458899999999984 54 5899999999885321100 0111111122245
Q ss_pred EEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 550 TIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 550 ~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
.|..... +|.|.|+|.|.|....
T Consensus 189 ~v~~~~~-~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 189 NVKKETW-QQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EEEHHHH-HTTCCEEEEEECTTSG
T ss_pred EEChhhc-CCCCEEEEEEECCCCC
Confidence 5554332 4789999999997644
No 444
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.61 E-value=4.6e-15 Score=151.70 Aligned_cols=167 Identities=19% Similarity=0.270 Sum_probs=113.2
Q ss_pred ceeecCCCeEEEEEeeccCC-----CCeeEEeeCC--EEe------------cCCCcEEEeecC---cEEEccccCCCCE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAP-----KPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSG 654 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p-----~~~i~W~~~g--~~~------------~~~~~~~~~~~~---~l~i~~~~~~d~G 654 (978)
.+.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ ....++.+...+ +|.|.+++.+|+|
T Consensus 43 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 122 (252)
T 3bkj_L 43 SLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLG 122 (252)
T ss_dssp EEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCE
Confidence 44578999999999999887 5799999854 111 012355444333 6999999999999
Q ss_pred EEEEEEEeCCceee-eeEEEEEEe---CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccc
Q psy12060 655 IYSCTATNVHGMDE-SKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 730 (978)
Q Consensus 655 ~Y~C~a~n~~g~~~-~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~ 730 (978)
.|+|.|.|..+... ....|.|.. +|.+... ++...+..|+.++|.|.+.+.+++.+.+.|+++|..+........
T Consensus 123 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 201 (252)
T 3bkj_L 123 VYYCFQASLVPLTFGAGTKLELKRADAAPTVSIF-PPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSW 201 (252)
T ss_dssp EEEEEECSBSSCEECCCEEEEECCCCBCCEEEEE-CCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEE
T ss_pred EEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEe-CCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeec
Confidence 99999998765322 234566653 2333222 222223468899999999997655577899999998754200000
Q ss_pred cCCeeecC-----CceEEEeccCCCCCEEEEEEEEcCCCc
Q psy12060 731 ETPNINID-----GGLLEITNASFADAGEYECVVKSTVGK 765 (978)
Q Consensus 731 ~~~~~~~~-----~~~l~i~~~~~~d~g~Y~c~a~n~~G~ 765 (978)
......+ ...|.|..+..+|+|.|+|.|.|....
T Consensus 202 -~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 202 -TDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp -CCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred -CcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 0000111 135899999999999999999997654
No 445
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.61 E-value=3.5e-15 Score=153.14 Aligned_cols=162 Identities=17% Similarity=0.273 Sum_probs=109.0
Q ss_pred CCCCCCcEEEEEEEeec--CCCeeEEEEcCc--c---C-------------CCCceee------ecccEEEeCCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGY--PVPSYNWTRRGS--P---L-------------PRNAYFE------NFNRILTIPNVKVEDQ 463 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~--p~~~v~W~~~~~--~---l-------------~~~~~~~------~~~~~L~i~~~~~~d~ 463 (978)
.+.+|++++|.|.+.+. +.+.|.|+|... . + ....++. ....+|.|.+++.+|+
T Consensus 19 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 98 (257)
T 3gkz_A 19 LVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDT 98 (257)
T ss_dssp EECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhhC
Confidence 46799999999999984 477999999431 1 1 0001111 1123799999999999
Q ss_pred eEEEEEEEeCCC----ceEEEEEEEEEee--------------ceeeccCCcccccCCCceeEEEEeecCCCC-eeEEeE
Q psy12060 464 GEYICRASNDRS----ALESSVTISIQAE--------------PNFTIPLTDKHMDNQADLTWTCEAFGVPDV-TYSWFR 524 (978)
Q Consensus 464 G~Y~C~a~n~~g----~~~~~~~l~V~~~--------------p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~i~W~~ 524 (978)
|.|.|.|.|..+ .....+.|.|..+ |.+...+....+.+|++++|.|.+.+.+.+ .+.|+|
T Consensus 99 G~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 178 (257)
T 3gkz_A 99 ATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQ 178 (257)
T ss_dssp EEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEE
T ss_pred EEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEE
Confidence 999999999622 1233456777654 456666666788999999999999988776 999998
Q ss_pred C--CEECCC-----CCCCCCCCCcEEEe----cCEEEEEeCCCCCCCeEEEEEEEcCCC
Q psy12060 525 N--GELLNS-----ETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLK 572 (978)
Q Consensus 525 ~--g~~~~~-----~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y~C~a~n~~g 572 (978)
. +..+.. .........++... ...|.|.++.. +|+|.|+|.|.+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~~~~~~ 236 (257)
T 3gkz_A 179 QKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEA-EDAASYFCHQWSSFP 236 (257)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEEEEEECSSSS
T ss_pred ECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCCh-HHCEEEEEEEccCCc
Confidence 3 322210 00000012333322 12599999997 999999999987543
No 446
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.61 E-value=1.6e-15 Score=152.35 Aligned_cols=164 Identities=16% Similarity=0.250 Sum_probs=107.9
Q ss_pred CCCCCCcEEEEEEEeecCC----CeeEEEEcC--ccCC----------------CCceeee------cccEEEeCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYPV----PSYNWTRRG--SPLP----------------RNAYFEN------FNRILTIPNVKVE 461 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~----~~v~W~~~~--~~l~----------------~~~~~~~------~~~~L~i~~~~~~ 461 (978)
.+.+|++++|.|.+.+.|. +.|.|+|++ ..+. ...++.. ....|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 90 (228)
T 3bae_H 11 LLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDTA 90 (228)
T ss_dssp EECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCGG
T ss_pred eecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCcc
Confidence 5679999999999998765 899999853 2210 0112211 2368999999999
Q ss_pred CCeEEEEEEEeCCC------c---eEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECC
Q psy12060 462 DQGEYICRASNDRS------A---LESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNG 526 (978)
Q Consensus 462 d~G~Y~C~a~n~~g------~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g 526 (978)
|+|.|.|.+.+..| . ....+.|.|.. +|.+........+.+|+.++|.|.+.+. |.+ .|.|++++
T Consensus 91 D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~ 170 (228)
T 3bae_H 91 DTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGS 170 (228)
T ss_dssp GCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeCC
Confidence 99999999998764 1 11236777773 4555543323346789999999999986 766 99999988
Q ss_pred EECCCCCCC-CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceee
Q psy12060 527 ELLNSETLP-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576 (978)
Q Consensus 527 ~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 576 (978)
..+...... ....+.+ .....|.|..+.. +| |.|+|.|.|..+....
T Consensus 171 ~~~~~~~~~~~~~~~~~-~~~s~L~i~~~~~-d~-g~YtC~~~n~~~~~~~ 218 (228)
T 3bae_H 171 LSSGVHTFPAVLQSDLY-TLSSSVTVTSSTW-PS-ESITCNVAHPASSTKV 218 (228)
T ss_dssp CCTTEEEEEEEEETTEE-EEEEEEEEETTTT-TT-SCCEEEEEEGGGTEEE
T ss_pred cccCceEcCceeCCCcE-EEEEEEEEEhhhc-CC-CcEEEEEEECCCCCCE
Confidence 754210000 0011222 2234688888764 55 9999999998876543
No 447
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.60 E-value=1.1e-14 Score=149.51 Aligned_cols=165 Identities=18% Similarity=0.240 Sum_probs=105.1
Q ss_pred cccCcEEEEEEeecC--CCCeEEEEEccc--ccccccc--cccCCCCCCceEee----cceEEEeCCCCCCCCeEEEEEE
Q psy12060 207 SILNDITLSCYAGGY--PNPSYEWFKEDY--VQDRLVA--NLIDPLSDKRFTLS----GGNLIINDPRQVEDRGSYHCKA 276 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~--p~~~v~W~~~~~--~~~~~~~--~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y~C~a 276 (978)
.+|++++|.|.+.+. |.+.+.|||++. ....+.. .........++... ..+|.|.++ +.+|+|.|+|.|
T Consensus 15 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v-~~~DsG~Y~C~~ 93 (256)
T 3ux9_B 15 APGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGL-QSEDEADYYCQV 93 (256)
T ss_dssp CTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSC-CGGGCEEEEEEE
T ss_pred cCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCC-ChhhCEEEEEEE
Confidence 346779999999887 788999999642 1111100 00001122344432 227999998 899999999999
Q ss_pred EeCcee--EEeEEEEEEEeeecc--------------------cccCCCCeeeecccCeEEEeCCCCCCC--CceEEEec
Q psy12060 277 SNKFGS--IISESVQLAFGFIGE--------------------FNLKRAPEIGNQNWGKAMFCDPPTNYP--GVNYYWAR 332 (978)
Q Consensus 277 ~n~~g~--~~s~~~~l~v~~~~~--------------------~~~~~~~~~~~~~~~~~l~C~~~~~~p--~~~i~W~~ 332 (978)
.|..+. ..+..+.|.|...+. .........+.+|+.++|.|.+. +.+ .+.+.|+|
T Consensus 94 ~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r 172 (256)
T 3ux9_B 94 RDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAAS-GFTFSSYAMSWVR 172 (256)
T ss_dssp EETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEE-SSCGGGSEEEEEE
T ss_pred EECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEe-CCcccccEEEEEE
Confidence 986542 233456666654431 11123344577899999999984 444 68999999
Q ss_pred cc--cccc-c--------------cccceEEEeeCC-----cEEEeeeeeecceeeEEEEEee
Q psy12060 333 DY--FPNF-V--------------EEDKRVFVSYDG-----ALYFSALEQIDAGNYSCNVQSK 373 (978)
Q Consensus 333 ~~--~~~~-~--------------~~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~~~n~ 373 (978)
+. .... + ....++.+..++ +|.|.+++.+|+|.|+|.|.|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 173 QAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYID 235 (256)
T ss_dssp ECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 73 2210 0 112345554332 4999999999999999999985
No 448
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.60 E-value=5.8e-15 Score=149.67 Aligned_cols=172 Identities=15% Similarity=0.188 Sum_probs=114.3
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEeeCC--EE------------ecCCCcEEEee---cCcEEEccccCCCCEEEEEE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NI------------IGSGGRRKIFE---NGNLLISPVSRDDSGIYSCT 659 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g--~~------------~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~ 659 (978)
...+.+|++++|.|.+.+.|.+.+.|+|.+ .. .....++.... +.+|.|.+++.+|+|.|+|.
T Consensus 33 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 112 (237)
T 3sob_L 33 SLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ 112 (237)
T ss_dssp EEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred eEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEe
Confidence 455889999999999999988899999832 11 01124444432 33599999999999999999
Q ss_pred EEeCCcee-eeeEEEEEEe---CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccc----ccc
Q psy12060 660 ATNVHGMD-ESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN----ELE 731 (978)
Q Consensus 660 a~n~~g~~-~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~----~~~ 731 (978)
+.|..+.. .....|.|.. +|.+... ++......|+.++|.|.+.+.+++...+.|+++|..+...... ...
T Consensus 113 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~ 191 (237)
T 3sob_L 113 QSYTTPPTFGQGTKVEIKRTVAAPSVFIF-PPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDS 191 (237)
T ss_dssp ECSSSSCEECCCEEEEEECCCBCCEEEEE-CCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCT
T ss_pred eccCCceEEcCcEEEEEecCCCCCceEEe-CCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeeccccccc
Confidence 99876532 2334666643 2222221 2222334578899999999966535678999999988642100 000
Q ss_pred CCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeee
Q psy12060 732 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769 (978)
Q Consensus 732 ~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~ 769 (978)
..........|.|.....+|+|.|+|.|.|........
T Consensus 192 ~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 192 KDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 229 (237)
T ss_dssp TTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred CCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCcee
Confidence 00000112468888899999999999999987654433
No 449
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.60 E-value=1.3e-15 Score=150.17 Aligned_cols=162 Identities=16% Similarity=0.214 Sum_probs=108.2
Q ss_pred ecCCCeEEEEEeeccCC---C-CeeEEeeCCEEecCCCc--------EEEeecCcEEEccccCCCCEEEEEEEEeCCcee
Q psy12060 600 AGEGGNVTIFCNPEAAP---K-PKFVWKKDGNIIGSGGR--------RKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 667 (978)
Q Consensus 600 ~~~g~~~~l~C~~~~~p---~-~~i~W~~~g~~~~~~~~--------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 667 (978)
+..|++++|.|.+.+.+ . +.|.|+|++..+..... ......+.|.|.+++.+|+|.|+|.|.|..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 67899999999999874 2 49999999977653210 011123469999999999999999999988764
Q ss_pred eeeEEE----EEEeCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccccccccCCeeecCC----
Q psy12060 668 ESKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---- 739 (978)
Q Consensus 668 ~~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~---- 739 (978)
.....+ .+..+|.+....+... ...|+.+.|.|.+.+.+++.+.+.|+++|..+..... .......++
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~---~~~~~~~~g~~~~ 170 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKN---TQPIMDTDGSYFV 170 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEE---CCCEECTTSCEEE
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCccc---CCceECCCCCEEE
Confidence 332232 2334555433332222 2258899999999997666678899999998754210 001111111
Q ss_pred -ceEEEeccCCCCCEEEEEEEEcCCCc
Q psy12060 740 -GLLEITNASFADAGEYECVVKSTVGK 765 (978)
Q Consensus 740 -~~l~i~~~~~~d~g~Y~c~a~n~~G~ 765 (978)
..|.|.....+|.|.|+|.|.|....
T Consensus 171 ~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 171 YSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred EEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 23555555567899999999998653
No 450
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.60 E-value=2.6e-15 Score=150.02 Aligned_cols=172 Identities=17% Similarity=0.267 Sum_probs=113.1
Q ss_pred CCeeeecccCeEEEeCCCCCCC--CceEEEecccc--c---cc-cc-------------ccceEEEeeC-----CcEEEe
Q psy12060 303 APEIGNQNWGKAMFCDPPTNYP--GVNYYWARDYF--P---NF-VE-------------EDKRVFVSYD-----GALYFS 356 (978)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~~p--~~~i~W~~~~~--~---~~-~~-------------~~~~~~~~~~-----~~L~i~ 356 (978)
....+.+|+.++|.|.+. +.+ .+.+.|+|++. . +. .. ...|+.+..+ .+|.|.
T Consensus 8 ~~~~~~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVAS-GFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp CCEEECTTCCEEEEEEEE-SSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred CCEEEcCCCeEEEEEEEc-CCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 345678899999999984 444 68899999642 1 00 00 0245555432 279999
Q ss_pred eeeeecceeeEEEEEeecccccccCCceeEEEccCCC-ccccc-cCCCCCCCCCCCCCCCCcEEEEEEEeec-CCC-eeE
Q psy12060 357 ALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKVFPHSN-FQQLK-FPNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SYN 432 (978)
Q Consensus 357 ~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~-~~~~~-~~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~v~ 432 (978)
+++.+|+|.|+|.+.+..+..........|.|...+. .+.+. .++ ...+.+|+.++|.|.+.|. |.| +|+
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~------~~~~~~g~~v~L~C~~~g~~P~p~~v~ 160 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVP------GCSDTSGSSVTLGCLVKGYFPEPVTVK 160 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECC------CSCCSCSSSEEEEEEEEEEBSSCCEEE
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEccc------ccccCCCCcEEEEEEEEEEeCCCeEEE
Confidence 9999999999999998643211111235777764221 11111 111 1245689999999999986 888 999
Q ss_pred EEEcCccCC---CCce----eeecccEEEeCCCCCCCCeEEEEEEEeCCCceEEEEE
Q psy12060 433 WTRRGSPLP---RNAY----FENFNRILTIPNVKVEDQGEYICRASNDRSALESSVT 482 (978)
Q Consensus 433 W~~~~~~l~---~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 482 (978)
|++++..+. .... .......|.|.++..+| |.|+|.|.|..|..++++.
T Consensus 161 W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 161 WNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp EGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 999887421 0000 11123578999988866 9999999999988766554
No 451
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.60 E-value=3.3e-15 Score=151.54 Aligned_cols=160 Identities=21% Similarity=0.260 Sum_probs=107.5
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcCc--cCC------------CCceee----ecccEEEeCCCCCCCCeEEEEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRGS--PLP------------RNAYFE----NFNRILTIPNVKVEDQGEYICRAS 471 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~~--~l~------------~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~ 471 (978)
.+.+|++++|.|.+.+.|.+.|.|+|++. .+. ...++. ....+|.|.+++.+|+|.|.|.+.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (242)
T 2znx_A 12 SVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQS 91 (242)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEeEe
Confidence 46799999999999998889999999642 110 011111 123579999999999999999999
Q ss_pred eCCCce-EEEEEEEEEeece-------------eeccCCcccccCCCceeEEEEeecCC--CCeeEEeEC--CEECC---
Q psy12060 472 NDRSAL-ESSVTISIQAEPN-------------FTIPLTDKHMDNQADLTWTCEAFGVP--DVTYSWFRN--GELLN--- 530 (978)
Q Consensus 472 n~~g~~-~~~~~l~V~~~p~-------------~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~--g~~~~--- 530 (978)
|..+.. ...+.|.|..+|. ....+....+.+|++++|.|.+.+.+ .+.+.|+|+ +..+.
T Consensus 92 n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~ 171 (242)
T 2znx_A 92 NSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMG 171 (242)
T ss_dssp SSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEE
T ss_pred cCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEE
Confidence 875432 2345677776542 22223335689999999999999875 578999994 32210
Q ss_pred ----CCC--CCCCCCCcEEEec------CEEEEEeCCCCCCCeEEEEEEEcC
Q psy12060 531 ----SET--LPLEDQDRYFIQD------NVLTIRYLNPERDPAMYQCRAKNQ 570 (978)
Q Consensus 531 ----~~~--~~~~~~~~~~~~~------~~l~i~~~~~~~d~G~Y~C~a~n~ 570 (978)
... .......++.+.. ..|.|.++.. +|+|.|+|.|.|.
T Consensus 172 ~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 172 YVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT-EDTATYYCANXDG 222 (242)
T ss_dssp EECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCG-GGCEEEEEEETTS
T ss_pred EEecCCccccCccccCcEEEEecCCCCEEEEEECCCCc-CcCEEEEEeccCC
Confidence 000 0000134444431 3899999997 9999999999874
No 452
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.60 E-value=7.7e-15 Score=150.71 Aligned_cols=178 Identities=15% Similarity=0.254 Sum_probs=114.5
Q ss_pred CeeEeCCCceEecCCCccccCcEEEEEEeecCC------CCeEEEEEcc--ccccccccc--ccCCCCCCceEee----c
Q psy12060 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP------NPSYEWFKED--YVQDRLVAN--LIDPLSDKRFTLS----G 255 (978)
Q Consensus 190 P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p------~~~v~W~~~~--~~~~~~~~~--~~~~~~~~~~~~~----~ 255 (978)
+.+...|.+..+. +|++++|.|.+.+.| .+.|.|||++ ..+..+... ........|+... .
T Consensus 6 ~~v~q~p~~v~v~-----~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~ 80 (264)
T 2gjj_A 6 IVLTQTPSSLPVS-----VGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTD 80 (264)
T ss_dssp CCEEEECSEEEEE-----TTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTE
T ss_pred cceEecCCeEEec-----CCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCE
Confidence 4455567766654 466799999999888 6899999963 221111000 0011123455442 2
Q ss_pred ceEEEeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeec------------------ccc-cCCCCeeeecccCeEEE
Q psy12060 256 GNLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIG------------------EFN-LKRAPEIGNQNWGKAMF 316 (978)
Q Consensus 256 ~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~------------------~~~-~~~~~~~~~~~~~~~l~ 316 (978)
.+|.|.++ +.+|+|.|.|.+.|..+...+..+.|.|..++ .+. .......+.+|+.++|.
T Consensus 81 ~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~ 159 (264)
T 2gjj_A 81 FTLTIGSV-KAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKIS 159 (264)
T ss_dssp EEEEESSC-CGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEE
T ss_pred EEEEECCC-CHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEE
Confidence 48999998 89999999999998765444445667775542 111 12334567889999999
Q ss_pred eCCCCCCC-CceEEEeccc--cccc-cc--------------ccceEEEee-----CCcEEEeeeeeecceeeEEEEEee
Q psy12060 317 CDPPTNYP-GVNYYWARDY--FPNF-VE--------------EDKRVFVSY-----DGALYFSALEQIDAGNYSCNVQSK 373 (978)
Q Consensus 317 C~~~~~~p-~~~i~W~~~~--~~~~-~~--------------~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~~~n~ 373 (978)
|.+....+ .+.|.|+|+. .... +. ...++.+.. ..+|.|.+++.+|+|.|+|.+.|.
T Consensus 160 C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 160 CKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 99853322 3789999973 2211 10 023443332 237999999999999999999985
No 453
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.59 E-value=1.6e-14 Score=147.56 Aligned_cols=169 Identities=18% Similarity=0.280 Sum_probs=112.4
Q ss_pred eeccCCcccccCCCceeEEEEeecCCCCeeEEeECCE-----ECC--CCCCCCCCCCcEEEec----CEEEEEeCCCCCC
Q psy12060 491 FTIPLTDKHMDNQADLTWTCEAFGVPDVTYSWFRNGE-----LLN--SETLPLEDQDRYFIQD----NVLTIRYLNPERD 559 (978)
Q Consensus 491 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g~-----~~~--~~~~~~~~~~~~~~~~----~~l~i~~~~~~~d 559 (978)
+...+....+.+|++++|.|.+.+.|.+.+.|+|+.. .+. ..........++.... ..|.|.++.. +|
T Consensus 7 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D 85 (250)
T 3esu_F 7 LIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ-ED 85 (250)
T ss_dssp EECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GG
T ss_pred EEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh-hh
Confidence 4445666778999999999999999999999999431 110 0000011223443322 2799999996 99
Q ss_pred CeEEEEEEEcCCCcee-eEEEEEEEEc------------------CCccccCCCCcceeecCCCeEEEEEeeccCC--CC
Q psy12060 560 PAMYQCRAKNQLKTRY-SSAQLRVLTL------------------KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KP 618 (978)
Q Consensus 560 ~G~Y~C~a~n~~g~~~-~~~~l~v~~~------------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~ 618 (978)
+|.|.|.+.|..+... ....|.|... ++.+... +....+.+|++++|.|.+.+.+ .+
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~~ 163 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQ--SGPELVKPGASVKISCKDSGYAFSSS 163 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC------------------------CEE--CCCEEECTTCCEEEEEECCSTTGGGS
T ss_pred CEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEec--CCceEEcCCceEEEEEEecCCcccCC
Confidence 9999999998765432 2334555431 1112222 2345588999999999999877 77
Q ss_pred eeEEeeC--CEEec-----------------CCCcEEEeecC-----cEEEccccCCCCEEEEEEEEe
Q psy12060 619 KFVWKKD--GNIIG-----------------SGGRRKIFENG-----NLLISPVSRDDSGIYSCTATN 662 (978)
Q Consensus 619 ~i~W~~~--g~~~~-----------------~~~~~~~~~~~-----~l~i~~~~~~d~G~Y~C~a~n 662 (978)
.+.|+++ +..+. ...++.+..++ +|.|.+++.+|+|.|+|.|.+
T Consensus 164 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 164 WMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 9999986 43221 11344444332 599999999999999999997
No 454
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.59 E-value=4.9e-15 Score=148.36 Aligned_cols=166 Identities=16% Similarity=0.174 Sum_probs=105.2
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEcc--cccccccc-------cccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKED--YVQDRLVA-------NLIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~--~~~~~~~~-------~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.|.| .+.|.|||++ ..+..+.. .........|+.+. +.+|.|.++ +.+|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v-~~~D~ 91 (225)
T 1op3_H 13 KAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM-RVEDT 91 (225)
T ss_dssp ETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC-CGGGC
T ss_pred cCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC-ChhhC
Confidence 3467799999999877 6899999974 21111100 00111123455543 348999998 89999
Q ss_pred eEEEEEEEeCce-----e--EEeEEEEEEEeee----cccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccccc
Q psy12060 270 GSYHCKASNKFG-----S--IISESVQLAFGFI----GEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYFPN 337 (978)
Q Consensus 270 G~Y~C~a~n~~g-----~--~~s~~~~l~v~~~----~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~~ 337 (978)
|.|+|.+.|..| . .....+.|.|... |.+....+...+..|+.++|.|.+.+..|.+ .|+|+|++..+
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~ 171 (225)
T 1op3_H 92 AIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTS 171 (225)
T ss_dssp EEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTTSCCT
T ss_pred EEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecCCCcC
Confidence 999999999864 2 2234456776542 2121111122245688899999996555766 99999998653
Q ss_pred cccccceEEEeeCC------cEEEeeeeeecceeeEEEEEeecc
Q psy12060 338 FVEEDKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 338 ~~~~~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
........ ...++ .|.|.++..+| |.|+|.|.|..+
T Consensus 172 ~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 213 (225)
T 1op3_H 172 GVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 213 (225)
T ss_dssp TCEECCCE-ECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGG
T ss_pred CeEecCce-eCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCC
Confidence 21111111 12222 58888888888 999999999754
No 455
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.59 E-value=9.8e-15 Score=145.52 Aligned_cols=167 Identities=16% Similarity=0.185 Sum_probs=107.0
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEccc--cccccccc-------ccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLVAN-------LIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~~--~~~~~~~~-------~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.+.| .+.+.|||.+. ....+... ........|+.+. +.+|.|.++ +.+|+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~Ds 91 (220)
T 2fbj_H 13 QPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV-RSEDT 91 (220)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC-CGGGC
T ss_pred cCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC-ChhhC
Confidence 3477799999999876 57999999642 11111100 0111123455543 238999998 89999
Q ss_pred eEEEEEEEeCcee--EEeEEEEEEEeee----cccccCCCCeeeecccCeEEEeCCCCCCCC--ceEEEecccccccccc
Q psy12060 270 GSYHCKASNKFGS--IISESVQLAFGFI----GEFNLKRAPEIGNQNWGKAMFCDPPTNYPG--VNYYWARDYFPNFVEE 341 (978)
Q Consensus 270 G~Y~C~a~n~~g~--~~s~~~~l~v~~~----~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~--~~i~W~~~~~~~~~~~ 341 (978)
|.|.|.+.|..+. .....+.|.|... |.+.... ...+..|..++|.|.+.+..|. +.|+|+|++..+....
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~ 170 (220)
T 2fbj_H 92 ALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVN 170 (220)
T ss_dssp EEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEE
T ss_pred EEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEe
Confidence 9999999987553 2334456776532 1111111 2234578889999999655576 7999999987642111
Q ss_pred cceEEEeeCC------cEEEeeeeeecceeeEEEEEeeccc
Q psy12060 342 DKRVFVSYDG------ALYFSALEQIDAGNYSCNVQSKVSD 376 (978)
Q Consensus 342 ~~~~~~~~~~------~L~i~~~~~~d~G~Y~C~~~n~~~~ 376 (978)
... ....++ .|.|.....+|.|.|+|.|.|..+.
T Consensus 171 ~~~-~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~ 210 (220)
T 2fbj_H 171 FPP-ALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNP 210 (220)
T ss_dssp CCC-EECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSC
T ss_pred cCc-eECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCc
Confidence 111 112233 4788888888999999999997643
No 456
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.59 E-value=4.7e-15 Score=146.93 Aligned_cols=167 Identities=14% Similarity=0.241 Sum_probs=110.6
Q ss_pred eecCCCeEEEEEeeccCC--CCeeEEeeC--CEEec----------------CCCcEEEeec-----CcEEEccccCCCC
Q psy12060 599 YAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG----------------SGGRRKIFEN-----GNLLISPVSRDDS 653 (978)
Q Consensus 599 ~~~~g~~~~l~C~~~~~p--~~~i~W~~~--g~~~~----------------~~~~~~~~~~-----~~l~i~~~~~~d~ 653 (978)
.+.+|++++|.|.+.+.+ .+.+.|+|+ |..+. ...++.+..+ .+|.|.+++.+|+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 90 (210)
T 3d9a_H 11 LVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDT 90 (210)
T ss_dssp EECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcccC
Confidence 478999999999999875 379999985 22210 1345555432 2699999999999
Q ss_pred EEEEEEEEeCCceeeeeEEEEEEe----CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccccc
Q psy12060 654 GIYSCTATNVHGMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729 (978)
Q Consensus 654 G~Y~C~a~n~~g~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~ 729 (978)
|.|+|.|.|.. .......|.|.. +|.+... ++...+..|+.++|.|.+.+..+..+.+.|++++..+.......
T Consensus 91 G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~ 168 (210)
T 3d9a_H 91 ATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPA 168 (210)
T ss_dssp EEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEE-CCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCC
T ss_pred EEEEEEEecCc-ccccceEEEeccCCCCCCEEEEe-cCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCC
Confidence 99999999864 222335666653 2333222 22234568999999999998743345789999987642211000
Q ss_pred -ccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeee
Q psy12060 730 -LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 769 (978)
Q Consensus 730 -~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~ 769 (978)
...... ...+.|.|.....++ |.|+|.|.|..|.....
T Consensus 169 ~~~~~~~-~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 169 VLQSDLY-TLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp EEETTEE-EEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccCCCcE-EEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 000111 113468898888766 99999999999876543
No 457
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.58 E-value=2.1e-14 Score=143.39 Aligned_cols=172 Identities=17% Similarity=0.251 Sum_probs=113.0
Q ss_pred CCeeeecccCeEEEeCCCCCCC--CceEEEeccc--ccc-cc--------------cccceEEEeeC-----CcEEEeee
Q psy12060 303 APEIGNQNWGKAMFCDPPTNYP--GVNYYWARDY--FPN-FV--------------EEDKRVFVSYD-----GALYFSAL 358 (978)
Q Consensus 303 ~~~~~~~~~~~~l~C~~~~~~p--~~~i~W~~~~--~~~-~~--------------~~~~~~~~~~~-----~~L~i~~~ 358 (978)
....+.+|+.++|.|.+. +.+ .+.+.|+|.. ... .+ ....|+.+..+ .+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAAS-GFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp CCCEECTTCCEEEEEEEE-SSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEcCCCcEEEEEEec-CcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 345678899999999984 333 4789999853 111 00 01245555432 37999999
Q ss_pred eeecceeeEEEEEeecc---cccccCCceeEEEccCC-Ccccccc-CCCCCCCCCCCCCCCCcEEEEEEEeec-CCC-ee
Q psy12060 359 EQIDAGNYSCNVQSKVS---DTGRNGPFFPLKVFPHS-NFQQLKF-PNNFPKTFPEAPKAGDKVRLECVAFGY-PVP-SY 431 (978)
Q Consensus 359 ~~~d~G~Y~C~~~n~~~---~~~~~~~~~~l~V~~~~-~~~~~~~-~~~~~~~~~~~v~~G~~~~l~C~~~g~-p~~-~v 431 (978)
+.+|+|.|+|.+.+..+ ........+.|.|...+ ..+.+.. ++ ...+.+|+.++|.|.+.|. |.| .|
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~------~~~~~~g~~v~L~C~~~g~~P~p~~v 160 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVS------CENSNPSSTVAVGCLAQDFLPDSITF 160 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEEC------TTCCCSSSEEEEEEEEEEEBSSCCEE
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecC------CcccCCCCcEEEEEEEEEEeCCCeEE
Confidence 99999999999988642 11011223578887421 1111111 11 1234689999999999986 777 99
Q ss_pred EEEE-cCccCCCCce----ee----ecccEEEeCCCCC--CCCeEEEEEEEeCCCceEEEE
Q psy12060 432 NWTR-RGSPLPRNAY----FE----NFNRILTIPNVKV--EDQGEYICRASNDRSALESSV 481 (978)
Q Consensus 432 ~W~~-~~~~l~~~~~----~~----~~~~~L~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~ 481 (978)
+|++ +|..+..... .. .....|.|..... +|.|.|+|.|.|..+.....+
T Consensus 161 ~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 161 SWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp EEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred EeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 9999 8888754100 00 1124688887776 889999999999988765544
No 458
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.58 E-value=2.5e-15 Score=148.23 Aligned_cols=161 Identities=19% Similarity=0.298 Sum_probs=101.2
Q ss_pred CCCCcEEEEEEEeecCC----CeeEEEEcCccCCCCce---eeecccEE------EeCCCCCCCCeEEEEEEEeCCCce-
Q psy12060 412 KAGDKVRLECVAFGYPV----PSYNWTRRGSPLPRNAY---FENFNRIL------TIPNVKVEDQGEYICRASNDRSAL- 477 (978)
Q Consensus 412 ~~G~~~~l~C~~~g~p~----~~v~W~~~~~~l~~~~~---~~~~~~~L------~i~~~~~~d~G~Y~C~a~n~~g~~- 477 (978)
.+|++++|.|.+.|.++ +.|+|+|++.++..... ....++.| .|......|+|.|+|.|.|..+..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 58999999999998753 49999999987754321 11112333 333333345999999999987764
Q ss_pred -EEEEEE--EEEeeceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCCCCC-C-CCCCcEEEecCEEE
Q psy12060 478 -ESSVTI--SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSETLP-L-EDQDRYFIQDNVLT 550 (978)
Q Consensus 478 -~~~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~-~-~~~~~~~~~~~~l~ 550 (978)
...+.+ .+..+|.+.+.+.......|+.++|.|.+.|. |. +.|+|+|+|..+...... . ...+........|.
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~ 175 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLT 175 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEE
T ss_pred eEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEE
Confidence 333332 34567776654333333356679999999985 54 599999999987632100 0 01111111223455
Q ss_pred EEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 551 IRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 551 i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
+..... +|.|.|+|.|.|....
T Consensus 176 i~~~~~-~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 176 VDKSRW-QQGNVFSCSVMHEALH 197 (207)
T ss_dssp EEHHHH-HTTCCEEEEEECTTSG
T ss_pred ECHHHc-CCCCEEEEEEEcCCcC
Confidence 554432 5799999999997643
No 459
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.58 E-value=4.8e-15 Score=148.33 Aligned_cols=171 Identities=15% Similarity=0.255 Sum_probs=113.1
Q ss_pred eecCCCeEEEEEeeccCC--CCeeEEeeCC--EE---ec----------------CCCcEEEeec-----CcEEEccccC
Q psy12060 599 YAGEGGNVTIFCNPEAAP--KPKFVWKKDG--NI---IG----------------SGGRRKIFEN-----GNLLISPVSR 650 (978)
Q Consensus 599 ~~~~g~~~~l~C~~~~~p--~~~i~W~~~g--~~---~~----------------~~~~~~~~~~-----~~l~i~~~~~ 650 (978)
.+.+|++++|.|.+.+.+ .+.+.|++.. .. +. ...++.+..+ .+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 90 (222)
T 1q9r_B 11 LVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRA 90 (222)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred eEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCCc
Confidence 478999999999998865 6799999842 21 10 1245555432 3699999999
Q ss_pred CCCEEEEEEEEeCCc-----eeeeeEEEEEEe----CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEE
Q psy12060 651 DDSGIYSCTATNVHG-----MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 721 (978)
Q Consensus 651 ~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~ 721 (978)
+|+|.|.|.+.|..+ .......|.|.. +|.+.... +...+..|+.++|.|.+.+..+..+.+.|+++|..
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 169 (222)
T 1q9r_B 91 EDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLA-PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 169 (222)
T ss_dssp GGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEEC-CCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred ccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcc-ccccccCCCcEEEEEEEccEECCCCEEEEecCCeE
Confidence 999999999998764 222345676654 23332222 22234579999999999986333357799999876
Q ss_pred cccccccc-ccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeEEE
Q psy12060 722 IGNMDLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 772 (978)
Q Consensus 722 ~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~~l 772 (978)
+....... ....... ..+.|.|..+...| |.|+|.|.|..|.......+
T Consensus 170 ~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 170 SGVHTFPAVLQSDLYT-LSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp TTEEEEEEEEETTEEE-EEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred cceEeccccccCCcEE-EEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 53211000 0001111 12468899988889 99999999999976544433
No 460
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.58 E-value=2.3e-14 Score=146.59 Aligned_cols=185 Identities=15% Similarity=0.188 Sum_probs=119.3
Q ss_pred ceeecCCCeEEEEEeeccCC--CCeeEEeeC--CEEe-----------------cCCCcEEEeecC-----cEEEccccC
Q psy12060 597 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNII-----------------GSGGRRKIFENG-----NLLISPVSR 650 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~--g~~~-----------------~~~~~~~~~~~~-----~l~i~~~~~ 650 (978)
.+.+.+|++++|.|.+.+.+ .+.+.|+|. +..+ ....++.+..+. +|.|.+++.
T Consensus 10 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 89 (253)
T 3uzq_A 10 AELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTS 89 (253)
T ss_dssp CEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCc
Confidence 34578999999999998854 679999982 2111 012345554333 299999999
Q ss_pred CCCEEEEEEEEeCCcee-eeeEEEEEEeC--------------CceeeeCCCceEEEccccEEEEEEeeecCCc--CeEE
Q psy12060 651 DDSGIYSCTATNVHGMD-ESKGRLIVLHG--------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAY 713 (978)
Q Consensus 651 ~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~--------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~~ 713 (978)
+|+|.|+|.|.|..+.. .....|.|... +..+...+....+..|+.++|.|.+.+.+.+ ...+
T Consensus 90 ~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v 169 (253)
T 3uzq_A 90 GDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFM 169 (253)
T ss_dssp GGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECE
T ss_pred ccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEE
Confidence 99999999999866554 23456666642 2333344556788999999999999987754 1356
Q ss_pred EEeeC--CEEcc---cccc--ccccCCeee----cCCceEEEeccCCCCCEEEEEEEEcCCCce-eeeEEEEEcCCCCCC
Q psy12060 714 IWTHN--GVRIG---NMDL--NELETPNIN----IDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGLP 781 (978)
Q Consensus 714 ~W~~~--g~~~~---~~~~--~~~~~~~~~----~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~-s~~~~l~v~~~P~~P 781 (978)
.|+++ +..+. .... ......++. .....|+|.++..+|+|.|.|.|.|..+.. ..-..|.|...+.+|
T Consensus 170 ~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~~~~ 249 (253)
T 3uzq_A 170 HWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPLEHH 249 (253)
T ss_dssp EEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC----
T ss_pred EEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCCCCc
Confidence 89884 22111 0000 000001111 122369999999999999999999976543 345678887766554
No 461
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.58 E-value=4.4e-15 Score=150.18 Aligned_cols=174 Identities=18% Similarity=0.201 Sum_probs=115.0
Q ss_pred cceeecCCCeEEEEEeeccCCC-C-eeEEeeCC--EEe------------cCCCcEEEeec---CcEEEccccCCCCEEE
Q psy12060 596 SETYAGEGGNVTIFCNPEAAPK-P-KFVWKKDG--NII------------GSGGRRKIFEN---GNLLISPVSRDDSGIY 656 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p~-~-~i~W~~~g--~~~------------~~~~~~~~~~~---~~l~i~~~~~~d~G~Y 656 (978)
....+.+|++++|.|.+.+.+. + .+.|+|++ ..+ ....++..... .+|.|.+++.+|+|.|
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 106 (234)
T 2j6e_L 27 PSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADY 106 (234)
T ss_dssp SCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEE
T ss_pred CcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEE
Confidence 3445789999999999988643 4 79999853 221 01234444322 2699999999999999
Q ss_pred EEEEEeCCc---eeeeeEEEEEEe----CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccccccc
Q psy12060 657 SCTATNVHG---MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 729 (978)
Q Consensus 657 ~C~a~n~~g---~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~~~~ 729 (978)
+|.|.|..+ .......|.|.. +|.+....+ ......|+.++|.|.+.+.+++.+.+.|+++|..+.......
T Consensus 107 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~-~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 107 YCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPP-SSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECC-CHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCC-ChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 999999877 222234555532 333222222 222235789999999998766556889999999875431100
Q ss_pred ---ccCCeeecCCceEEEeccCCCCCEEEEEEEEcCCCceeeeE
Q psy12060 730 ---LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 770 (978)
Q Consensus 730 ---~~~~~~~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s~~~ 770 (978)
..........+.|.|..+..+|+|.|+|.|.|..+....++
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 00000111224788999999999999999999987655443
No 462
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=8.6e-15 Score=130.27 Aligned_cols=102 Identities=21% Similarity=0.251 Sum_probs=81.9
Q ss_pred CCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeee-eeeccceeEEEEEcCCCC
Q psy12060 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET-LKEYGNVGIAVVRIPSEF 955 (978)
Q Consensus 877 ~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~L~ 955 (978)
.++|.+++|+.+|.++++...+.++|.|+|++|+.+..||.|++|+|+|+..+...|.... ...........+.|.+|.
T Consensus 7 ~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 86 (122)
T 1va9_A 7 GISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLK 86 (122)
T ss_dssp SSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCC
T ss_pred EEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCC
Confidence 6789999998899999999999999999999966555899999999999988755443211 111111223557799999
Q ss_pred ceeeEEEEEEEecCCCCCCCCCC
Q psy12060 956 YYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 956 p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
|++.|.|+|+|+|.+|.|++|++
T Consensus 87 p~t~Y~~~V~A~n~~G~g~~S~~ 109 (122)
T 1va9_A 87 KFAQYGVVVQAFNRAGTGPSSSE 109 (122)
T ss_dssp SSCCEEEEEEEEETTEECCCCCC
T ss_pred CCCEEEEEEEEEcCCCCCCCccC
Confidence 99999999999999999999964
No 463
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.58 E-value=2.2e-14 Score=148.76 Aligned_cols=190 Identities=14% Similarity=0.147 Sum_probs=113.4
Q ss_pred CCceEecCCCccccCcEEEEEEeecC--CCCeEEEEEccc--cccccccc-------ccCCCCCCceEee--c----ceE
Q psy12060 196 PTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKEDY--VQDRLVAN-------LIDPLSDKRFTLS--G----GNL 258 (978)
Q Consensus 196 p~~~~~~~~~~~~g~~~~l~C~~~g~--p~~~v~W~~~~~--~~~~~~~~-------~~~~~~~~~~~~~--~----~~l 258 (978)
|....+. +|++|+|.|.+.+. +.+.+.|||... ....+... ........|+.+. . .+|
T Consensus 7 p~~~~v~-----~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (280)
T 3fku_X 7 SGAEVKK-----PGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYM 81 (280)
T ss_dssp CCCCEEC-----TTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEE
T ss_pred CCCEEEC-----CCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEE
Confidence 5555543 46679999999875 568999998531 11111000 0111122344443 1 279
Q ss_pred EEeCCCCCCCCeEEEEEEEeC--------ceeEEeEEEEEEEee---------------ecccccCCCCeeeecccCeEE
Q psy12060 259 IINDPRQVEDRGSYHCKASNK--------FGSIISESVQLAFGF---------------IGEFNLKRAPEIGNQNWGKAM 315 (978)
Q Consensus 259 ~i~~~~~~~d~G~Y~C~a~n~--------~g~~~s~~~~l~v~~---------------~~~~~~~~~~~~~~~~~~~~l 315 (978)
.|.++ +.+|+|.|.|.+.|. ........+.|.|.. ++.+...+ ...+.+|+.++|
T Consensus 82 ~I~~v-~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p-~~~v~~G~~v~L 159 (280)
T 3fku_X 82 DLRSL-RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPP-SVSKGLRQTATL 159 (280)
T ss_dssp EECSC-CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCS-EEEECTTCCEEE
T ss_pred EECCC-ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCC-cEEEecCCCEEE
Confidence 99998 899999999999987 122233445566654 22222222 267789999999
Q ss_pred EeCCCCCCC-CceEEEeccc--ccccc----------cccceEEEeeCC---cEEEeeeeeecceeeEEEEEeecccccc
Q psy12060 316 FCDPPTNYP-GVNYYWARDY--FPNFV----------EEDKRVFVSYDG---ALYFSALEQIDAGNYSCNVQSKVSDTGR 379 (978)
Q Consensus 316 ~C~~~~~~p-~~~i~W~~~~--~~~~~----------~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~n~~~~~~~ 379 (978)
.|.+....+ .+.+.|+|.. ..... ....|+....++ +|.|.+++.+|+|.|+|.+.+..+....
T Consensus 160 ~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~ 239 (280)
T 3fku_X 160 TCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVV 239 (280)
T ss_dssp EEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEE
T ss_pred EEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceE
Confidence 999865344 4789999842 21110 012344444333 4999999999999999999986521111
Q ss_pred cCCceeEEEccCC
Q psy12060 380 NGPFFPLKVFPHS 392 (978)
Q Consensus 380 ~~~~~~l~V~~~~ 392 (978)
-.....|.|...+
T Consensus 240 ~g~~t~l~V~~~~ 252 (280)
T 3fku_X 240 FGGGTKLTVLGQP 252 (280)
T ss_dssp EBCCCEEEEC---
T ss_pred ECCCEEEEECCCC
Confidence 1222567775443
No 464
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.57 E-value=2.5e-14 Score=146.64 Aligned_cols=175 Identities=18% Similarity=0.290 Sum_probs=116.2
Q ss_pred eceeeccCCcccccCCCceeEEEEeecC--CCCeeEEeEC--CEECC-------CC---CCCCCCCCcEEEe--c----C
Q psy12060 488 EPNFTIPLTDKHMDNQADLTWTCEAFGV--PDVTYSWFRN--GELLN-------SE---TLPLEDQDRYFIQ--D----N 547 (978)
Q Consensus 488 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~i~W~~~--g~~~~-------~~---~~~~~~~~~~~~~--~----~ 547 (978)
+|.+...+....+.+|++++|.|.+.+. +.+.+.|+|. +..+. .. ........++.+. . .
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 3455667778889999999999999873 6789999983 21110 00 0001123455544 1 2
Q ss_pred EEEEEeCCCCCCCeEEEEEEEcC------------CCceeeEEEEEEEEc--------------CCccccCCCCcceeec
Q psy12060 548 VLTIRYLNPERDPAMYQCRAKNQ------------LKTRYSSAQLRVLTL--------------KPSFKKRPLESETYAG 601 (978)
Q Consensus 548 ~l~i~~~~~~~d~G~Y~C~a~n~------------~g~~~~~~~l~v~~~--------------~p~~~~~~~~~~~~~~ 601 (978)
.|.|.+++. +|+|.|.|.+.|. .+.......|.|... +|.+... +....+.
T Consensus 86 ~L~I~~v~~-~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~ 162 (256)
T 3juy_B 86 YMELRSLRS-ADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQA--PGTLSLS 162 (256)
T ss_dssp EEEECSCCG-GGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEE--CSEEEEC
T ss_pred EEEECCCCc-ccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEec--CCeEEEe
Confidence 599999997 9999999999986 222233445666532 1222222 2455688
Q ss_pred CCCeEEEEEeeccCCC-CeeEEeeC--CEEec------------CCCcEEEeecC---cEEEccccCCCCEEEEEEEEeC
Q psy12060 602 EGGNVTIFCNPEAAPK-PKFVWKKD--GNIIG------------SGGRRKIFENG---NLLISPVSRDDSGIYSCTATNV 663 (978)
Q Consensus 602 ~g~~~~l~C~~~~~p~-~~i~W~~~--g~~~~------------~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~a~n~ 663 (978)
+|++++|.|.+.+.+. +.+.|+|. +..+. ...++.+...+ +|.|.+++.+|+|.|+|.|.|.
T Consensus 163 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 242 (256)
T 3juy_B 163 PGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGA 242 (256)
T ss_dssp TTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCS
T ss_pred CCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeC
Confidence 9999999999999876 89999982 22211 12344443333 4999999999999999999885
Q ss_pred Cc
Q psy12060 664 HG 665 (978)
Q Consensus 664 ~g 665 (978)
.+
T Consensus 243 ~~ 244 (256)
T 3juy_B 243 SS 244 (256)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 465
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=4.4e-15 Score=131.97 Aligned_cols=107 Identities=20% Similarity=0.301 Sum_probs=85.6
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeE
Q psy12060 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946 (978)
Q Consensus 867 G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~ 946 (978)
|.|++|... .++|.++.|+.+|.++++...+.++|.|+|++ +...||.|++|+|+|+..+...+.........+.
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-- 75 (121)
T 2dlh_A 1 GSSGSSGPV-LTQTSEQAPSSAPRDVQARMLSSTTILVQWKE--PEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADS-- 75 (121)
T ss_dssp CCCCCCSSS-CSCCCCCCCCSCCEEEEECCCSSSBCCEEEEC--CSCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSC--
T ss_pred CCCCCCCCE-EEECCCcCCCCCCcccEEEecCCCEEEEEECC--CCCCCCcEeEEEEEEEeCCCCCccccEEEecCCc--
Confidence 778888877 78899999988999999999999999999999 4678999999999998765332211111011122
Q ss_pred EEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 947 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 947 ~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
..+.|.+|.|++.|.|+|+|+|.+|.|++|++
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 107 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSD 107 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCC
Confidence 34679999999999999999999999999963
No 466
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.57 E-value=1.2e-14 Score=127.05 Aligned_cols=94 Identities=19% Similarity=0.327 Sum_probs=76.7
Q ss_pred CCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCc---cceeeeeeeccceeEEEEEcCCCCce
Q psy12060 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT---EFQSETLKEYGNVGIAVVRIPSEFYY 957 (978)
Q Consensus 881 ~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~p~ 957 (978)
.+.+|+.+|.++.+...+.++|.|+|++|+....||.|++|+|+|+..+.. .|....+. .+. ..+.|.+|.|+
T Consensus 4 ~~~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~--~~~--~~~~i~~L~p~ 79 (114)
T 1x4y_A 4 GSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVE--GDR--YWHSISHLQPE 79 (114)
T ss_dssp SCCSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEE--TTC--CEEEECSCCTT
T ss_pred cccCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecC--CcE--eEEEcCCCCCC
Confidence 456788999999999999999999999976678999999999999877643 33322222 122 34779999999
Q ss_pred eeEEEEEEEecCCCCCCCCCC
Q psy12060 958 TEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 958 t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
+.|.|+|+|+|.+|.||+|++
T Consensus 80 t~Y~~~V~A~n~~G~g~~S~~ 100 (114)
T 1x4y_A 80 TSYDIKMQCFNEGGESEFSNV 100 (114)
T ss_dssp CEEEEEEEEECTTCCCCCCCC
T ss_pred CEEEEEEEEEcCCccCCCcCC
Confidence 999999999999999999974
No 467
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=149.52 Aligned_cols=178 Identities=19% Similarity=0.181 Sum_probs=111.0
Q ss_pred CeeEeCCCceEecCCCccccCcEEEEEEeecCC-----CCeEEEEEccc--cccccccc--ccCCCCCCceEee----cc
Q psy12060 190 PYFIKQPTDVVFDLSKRSILNDITLSCYAGGYP-----NPSYEWFKEDY--VQDRLVAN--LIDPLSDKRFTLS----GG 256 (978)
Q Consensus 190 P~~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~p-----~~~v~W~~~~~--~~~~~~~~--~~~~~~~~~~~~~----~~ 256 (978)
+.++..|.+..+ .+|++++|.|.+.+.| .+.+.|||++. ....+... ........|+... ..
T Consensus 16 ~~v~~~p~~~~v-----~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~ 90 (268)
T 1x9q_A 16 VVMTQTPLSLPV-----SLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDF 90 (268)
T ss_dssp CCEEEECSEECC-----CTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEE
T ss_pred ceEEeeCCeEEe-----cCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEE
Confidence 455566666554 4577799999999887 48999999742 11111000 0011123455442 23
Q ss_pred eEEEeCCCCCCCCeEEEEEEEeCceeEEeEEEEEEEeeecc-----------------------cccCCCCeeeecccCe
Q psy12060 257 NLIINDPRQVEDRGSYHCKASNKFGSIISESVQLAFGFIGE-----------------------FNLKRAPEIGNQNWGK 313 (978)
Q Consensus 257 ~l~i~~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~-----------------------~~~~~~~~~~~~~~~~ 313 (978)
+|.|.++ +.+|+|.|+|.+.|..+...+..+.|.|...+. ....+....+.+|+.+
T Consensus 91 ~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v 169 (268)
T 1x9q_A 91 TLKINRV-EAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAM 169 (268)
T ss_dssp EEEESSC-CGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCE
T ss_pred EEEECCC-ChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcE
Confidence 7999997 899999999999987654334445555543221 0111234567889999
Q ss_pred EEEeCCCCCCC-CceEEEeccc--cccc-c----------------cccceEEEeeC-----CcEEEeeeeeecceeeEE
Q psy12060 314 AMFCDPPTNYP-GVNYYWARDY--FPNF-V----------------EEDKRVFVSYD-----GALYFSALEQIDAGNYSC 368 (978)
Q Consensus 314 ~l~C~~~~~~p-~~~i~W~~~~--~~~~-~----------------~~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C 368 (978)
+|.|.+....+ .+.+.|+|+. .... + ....++.+..+ .+|.|.+++.+|+|.|+|
T Consensus 170 ~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 249 (268)
T 1x9q_A 170 KLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYC 249 (268)
T ss_dssp EEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEE
T ss_pred EEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEE
Confidence 99999843332 3789999863 2110 0 12345554432 469999999999999999
Q ss_pred EEEee
Q psy12060 369 NVQSK 373 (978)
Q Consensus 369 ~~~n~ 373 (978)
.+.+.
T Consensus 250 ~a~~~ 254 (268)
T 1x9q_A 250 TGASY 254 (268)
T ss_dssp EEEET
T ss_pred EEccC
Confidence 99874
No 468
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.57 E-value=2.5e-15 Score=150.83 Aligned_cols=163 Identities=15% Similarity=0.258 Sum_probs=108.7
Q ss_pred CCCCCCcEEEEEEEeec-CC-C-eeEEEEcCccC-CCCcee--ee------cccEEEeCCCCCCCCeEEEEEEEeCCCce
Q psy12060 410 APKAGDKVRLECVAFGY-PV-P-SYNWTRRGSPL-PRNAYF--EN------FNRILTIPNVKVEDQGEYICRASNDRSAL 477 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~-p~-~-~v~W~~~~~~l-~~~~~~--~~------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 477 (978)
.+.+|+.++|.|.+.|. |. | .|+|+++|..+ ...... .. ....|.|.++..+|+|.|+|.|.|..+..
T Consensus 24 ~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 103 (231)
T 2w59_A 24 ELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELPL 103 (231)
T ss_dssp HHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCCC
Confidence 34689999999999985 64 4 99999999887 322111 11 12469999999999999999999987653
Q ss_pred EEEEEEEE----EeeceeeccCCcccccCCCceeEEEEeecC-C-CCeeEEeECCEECCCCCCC----CCC--------C
Q psy12060 478 ESSVTISI----QAEPNFTIPLTDKHMDNQADLTWTCEAFGV-P-DVTYSWFRNGELLNSETLP----LED--------Q 539 (978)
Q Consensus 478 ~~~~~l~V----~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~i~W~~~g~~~~~~~~~----~~~--------~ 539 (978)
.....+.+ ..+|.+.+.........|+.++|.|.+.|. | .+.|+|+|||..+...... ... .
T Consensus 104 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~ 183 (231)
T 2w59_A 104 PLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGG 183 (231)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---
T ss_pred ceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCC
Confidence 33333322 145665543222222335679999999985 4 4799999999998643200 000 1
Q ss_pred C-cEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 540 D-RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 540 ~-~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
+ ........|.|..... +|.|.|+|.|.|....
T Consensus 184 d~gt~~~~s~L~i~~~~~-~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 184 DGDTFFVYSKMSVETAKW-NGGTVFACMAVHEALP 217 (231)
T ss_dssp CCCCEEEEEEEEEEHHHH-HTTCCEEEEEECTTST
T ss_pred CCCeEEEEEEEEEeHHHc-CCCCcEEEEEEcCCCC
Confidence 1 2222234677777664 6899999999997654
No 469
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.57 E-value=5.5e-15 Score=147.00 Aligned_cols=164 Identities=14% Similarity=0.177 Sum_probs=102.7
Q ss_pred CCCCCCCcEEEEEEEeec--CCCeeEEEEcCccCC---------C---------Ccee----eecccEEEeCCCCCCCCe
Q psy12060 409 EAPKAGDKVRLECVAFGY--PVPSYNWTRRGSPLP---------R---------NAYF----ENFNRILTIPNVKVEDQG 464 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~--p~~~v~W~~~~~~l~---------~---------~~~~----~~~~~~L~i~~~~~~d~G 464 (978)
..+.+|++++|.|.+.+. +.+.+.|+|...... . ..++ ......|.|.+++.+|+|
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (215)
T 3nl4_H 9 RLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTA 88 (215)
T ss_dssp CEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCE
T ss_pred EEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCE
Confidence 356799999999999863 356899998532110 0 0111 112346999999999999
Q ss_pred EEEEEEEeCCCc----eEEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeecCC--CCeeEEeECCEECCCCCC
Q psy12060 465 EYICRASNDRSA----LESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFGVP--DVTYSWFRNGELLNSETL 534 (978)
Q Consensus 465 ~Y~C~a~n~~g~----~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~i~W~~~g~~~~~~~~ 534 (978)
.|.|.+.+..+. ....+.|.|. .+|.+...+....+.+|+.++|.|.+.+.+ ...+.|+++|..+....
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~- 167 (215)
T 3nl4_H 89 TYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRT- 167 (215)
T ss_dssp EEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE-
T ss_pred EEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEe-
Confidence 999999987553 2334567776 456665434444677899999999999863 44678999987553211
Q ss_pred CCCCCCcEEEecCEEEE---EeCCCCCCCeEEEEEEEcCCCceeeEEE
Q psy12060 535 PLEDQDRYFIQDNVLTI---RYLNPERDPAMYQCRAKNQLKTRYSSAQ 579 (978)
Q Consensus 535 ~~~~~~~~~~~~~~l~i---~~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 579 (978)
.......++.+.+ ..+.. .| |.|+|.|.|..+.......
T Consensus 168 ----~~~~~~~~g~~~~~s~l~v~~-~d-g~ytC~v~~~~~~~~~~~~ 209 (215)
T 3nl4_H 168 ----FPSVRQSSGLYSLSSVVSVTS-SS-QPVTCNVAHPATNTKVDKT 209 (215)
T ss_dssp ----CCCEECTTSCEEEEEEEEECC-----CCEEEEEEGGGTEEEEEE
T ss_pred ----cCceECCCCCEEEEEEEEEec-cC-CEEEEEEEeCCCCcceEEe
Confidence 1111112233333 33444 66 9999999998876544433
No 470
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.57 E-value=3.5e-15 Score=152.36 Aligned_cols=170 Identities=16% Similarity=0.295 Sum_probs=109.5
Q ss_pred CCCCCCcEEEEEEEee--cCCCeeEEEEcCcc-----C---C-----------CCceee------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFG--YPVPSYNWTRRGSP-----L---P-----------RNAYFE------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g--~p~~~v~W~~~~~~-----l---~-----------~~~~~~------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+ .+...+.|+|.... + . ...++. ....+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (253)
T 3liz_H 11 LVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSED 90 (253)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGGG
T ss_pred EECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhh
Confidence 5679999999999986 33568999985311 0 0 001111 123459999999999
Q ss_pred CeEEEEEEEeCC----CceEEEEEEEEE----eeceeeccCCcccccCCCceeEEEEeec-CCCC-eeEEeECCEECCCC
Q psy12060 463 QGEYICRASNDR----SALESSVTISIQ----AEPNFTIPLTDKHMDNQADLTWTCEAFG-VPDV-TYSWFRNGELLNSE 532 (978)
Q Consensus 463 ~G~Y~C~a~n~~----g~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~i~W~~~g~~~~~~ 532 (978)
+|.|.|.+.+.. ......+.|.|. .+|.+........+..|+.++|.|.+.+ .|.+ .+.|+++|..+...
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~ 170 (253)
T 3liz_H 91 TAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 170 (253)
T ss_dssp CEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred CEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceE
Confidence 999999998752 222334567775 4566654334445668999999999998 5655 89999998744211
Q ss_pred CCC-CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEE
Q psy12060 533 TLP-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV 582 (978)
Q Consensus 533 ~~~-~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 582 (978)
... ....+.+. ..+.|.|..... +| |.|+|.|.|..+.......+.+
T Consensus 171 ~~~~~~~~g~~~-~~s~L~i~~~~~-~d-g~ytC~v~~~~~~~~~~~~~~~ 218 (253)
T 3liz_H 171 TFPAVLQSDLYT-LSSSVTVPSSTW-PS-ETVTCNVAHPASSTKVDKKIVP 218 (253)
T ss_dssp ECCCEEETTEEE-EEEEEEEETTST-TT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred eCCccccCCeEE-EEEEEEEcHHHC-CC-ceEEEEEEECCCCcceEEEecC
Confidence 100 00113333 336788998875 78 9999999998876655555443
No 471
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.57 E-value=2.8e-14 Score=148.95 Aligned_cols=182 Identities=15% Similarity=0.114 Sum_probs=110.5
Q ss_pred cccCcEEEEEEeecCC--CCeEEEEEccc--cccccccc-------ccCCCCCCceEee------cceEEEeCCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYP--NPSYEWFKEDY--VQDRLVAN-------LIDPLSDKRFTLS------GGNLIINDPRQVEDR 269 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p--~~~v~W~~~~~--~~~~~~~~-------~~~~~~~~~~~~~------~~~l~i~~~~~~~d~ 269 (978)
.+|++++|.|.+.|.| .+.+.|||++. .+..+... ........|+.+. ..+|.|.++ +.+|+
T Consensus 35 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v-~~~Ds 113 (291)
T 2gki_A 35 KPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL-TSEDS 113 (291)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC-CGGGC
T ss_pred cCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC-CHHHC
Confidence 3467799999999877 57999999742 11110000 0001112344332 247999998 89999
Q ss_pred eEEEEEEEeCc-e---eEEeEEEEEEEeee---------------cc-cccCCCCeeeecccCeEEEeCCCCCCCCc---
Q psy12060 270 GSYHCKASNKF-G---SIISESVQLAFGFI---------------GE-FNLKRAPEIGNQNWGKAMFCDPPTNYPGV--- 326 (978)
Q Consensus 270 G~Y~C~a~n~~-g---~~~s~~~~l~v~~~---------------~~-~~~~~~~~~~~~~~~~~l~C~~~~~~p~~--- 326 (978)
|.|+|.+.|.. | ......+.|.|..+ +. +...+....+.+|+.++|.|.+. +.|.+
T Consensus 114 G~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~-~~~~~~~~ 192 (291)
T 2gki_A 114 AVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSS-QSLFNSRT 192 (291)
T ss_dssp EEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEES-SCCEETTT
T ss_pred EEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcC-Cccccccc
Confidence 99999999875 2 12223456666541 11 11122334678899999999984 45554
Q ss_pred ---eEEEeccc--cccc-cc---------ccceEEEeeC---CcEEEeeeeeecceeeEEEEEeecccccccCCceeEEE
Q psy12060 327 ---NYYWARDY--FPNF-VE---------EDKRVFVSYD---GALYFSALEQIDAGNYSCNVQSKVSDTGRNGPFFPLKV 388 (978)
Q Consensus 327 ---~i~W~~~~--~~~~-~~---------~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~~~l~V 388 (978)
.+.|+|+. .... +. ...++....+ ++|.|.+++.+|+|.|+|.|.|...... ..-..|.|
T Consensus 193 ~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~f--g~gt~l~v 270 (291)
T 2gki_A 193 RKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTF--GSGTKLEI 270 (291)
T ss_dssp TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEE--CCCEEEEE
T ss_pred cceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEE--cCCEEEEE
Confidence 89999973 2111 10 0234443322 3699999999999999999998532111 11246666
Q ss_pred ccCC
Q psy12060 389 FPHS 392 (978)
Q Consensus 389 ~~~~ 392 (978)
...+
T Consensus 271 ~~~~ 274 (291)
T 2gki_A 271 KHHH 274 (291)
T ss_dssp ECC-
T ss_pred EeeE
Confidence 6544
No 472
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.56 E-value=2.9e-15 Score=135.45 Aligned_cols=108 Identities=27% Similarity=0.296 Sum_probs=88.3
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeE
Q psy12060 867 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 946 (978)
Q Consensus 867 G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~ 946 (978)
|.|++|... .++|.+++|..+|.++++...+.++|.|+|++|.....||.|++|+|+|+..+...|.... ....+ .
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~-~~~~~--~ 76 (132)
T 1x5h_A 1 GSSGSSGDV-AVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTET-LVSGT--Q 76 (132)
T ss_dssp CCCCCCCCC-CCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECC-BCCTT--C
T ss_pred CcCCCCCCE-EEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEE-EeCCC--c
Confidence 778888877 7899999998899999999999999999999965555899999999999987754443221 11122 2
Q ss_pred EEEEcCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 947 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 947 ~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
..+.|.+|+|++.|.|+|+|+|.+|.|++|++
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 108 (132)
T 1x5h_A 77 LSQLIEGLDRGTEYNFRVAALTINGTGPATDW 108 (132)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCccCCCCcC
Confidence 44778999999999999999999999999863
No 473
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.56 E-value=1.4e-14 Score=128.82 Aligned_cols=104 Identities=20% Similarity=0.163 Sum_probs=83.0
Q ss_pred cCCccCCCCCCCCCCCCCCC------CCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeee
Q psy12060 864 NELGYGEPSSPSPQYNTPAD------KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 937 (978)
Q Consensus 864 N~~G~g~~s~~~~~~~t~~~------~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~ 937 (978)
+..|.|++|..+ .++|+++ +| .+|.++++...+ ++|.|+|++| ...||.|++|+|+|+. +...+....
T Consensus 2 t~~G~g~~S~~~-~~~T~~~~~~~~~~P-~~P~~l~~~~~~-~sv~l~W~~P--~~~~g~i~~Y~v~y~~-~~~~~~~~~ 75 (126)
T 1x5i_A 2 SSGSSGPATDWL-SAETFESDLDETRVP-EVPSSLHVRPLV-TSIVVSWTPP--ENQNIVVRGYAIGYGI-GSPHAQTIK 75 (126)
T ss_dssp CSCCCCCCCCCC-CSCCCCTTSBCSSCC-CSCSEEEEEEET-TEEEEEEECC--SCTTBCCCEEEEEECS-SCGGGEEEE
T ss_pred CCCccCCCCCCE-EeECccccCccCCCC-CCCCeeEEEecC-CEEEEEEcCC--CCCCCCEeEEEEEEEc-CCCCceEEE
Confidence 568999999877 7888887 66 599999998887 8999999994 5678999999999984 333333222
Q ss_pred eeeccceeEEEEEcCCCCceeeEEEEEEEecCCCCCCCCC
Q psy12060 938 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 977 (978)
Q Consensus 938 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~gp~S~ 977 (978)
+ ..+. ..+.|.+|.|++.|.|+|+|+|.+|.|++|.
T Consensus 76 ~--~~~~--~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~ 111 (126)
T 1x5i_A 76 V--DYKQ--RYYTIENLDPSSHYVITLKAFNNVGEGIPLY 111 (126)
T ss_dssp C--CTTC--CEEEECSCCSSCEECCEEEEECSSCBCCCCC
T ss_pred e--CCCe--eEEEEeCCCCCCEEEEEEEEEeCCccCccee
Confidence 2 1222 3477999999999999999999999999985
No 474
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.56 E-value=2.7e-14 Score=143.48 Aligned_cols=172 Identities=15% Similarity=0.285 Sum_probs=107.7
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC----------------CCceeee------cccEEEeCCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP----------------RNAYFEN------FNRILTIPNVKVEDQ 463 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~----------------~~~~~~~------~~~~L~i~~~~~~d~ 463 (978)
.+.+|++++|.|.+.+.+ .+.+.|||.. ..+. ...++.. ....|.|.+++.+|+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 90 (232)
T 1dn0_B 11 LLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADT 90 (232)
T ss_dssp EECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcccC
Confidence 557999999999998765 5789999964 2110 0112211 123899999999999
Q ss_pred eEEEEEEEeCC--Cc----eEEEEEEEEEe----eceeeccCCcccccCC-CceeEEEEeecC-CCC-eeEEeE-CCEEC
Q psy12060 464 GEYICRASNDR--SA----LESSVTISIQA----EPNFTIPLTDKHMDNQ-ADLTWTCEAFGV-PDV-TYSWFR-NGELL 529 (978)
Q Consensus 464 G~Y~C~a~n~~--g~----~~~~~~l~V~~----~p~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~~-~i~W~~-~g~~~ 529 (978)
|.|.|.+.+.. +. ....+.|.|.. +|.+........+..| +.++|.|.+.+. |.+ .|.|++ +|..+
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l 170 (232)
T 1dn0_B 91 AVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDI 170 (232)
T ss_dssp EEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTSCEE
T ss_pred EEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCce
Confidence 99999998421 11 22345777765 3554432112234578 999999999976 765 999999 99887
Q ss_pred CCCC-C-CCCCCCcEEEecCEEEEEeCCCC--CCCeEEEEEEEcCCCceeeEEEEEEE
Q psy12060 530 NSET-L-PLEDQDRYFIQDNVLTIRYLNPE--RDPAMYQCRAKNQLKTRYSSAQLRVL 583 (978)
Q Consensus 530 ~~~~-~-~~~~~~~~~~~~~~l~i~~~~~~--~d~G~Y~C~a~n~~g~~~~~~~l~v~ 583 (978)
.... . .......+. ....|.|.... . +|.|.|+|.|.|..+.......+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~-~~s~L~i~~~~-~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 171 SSTRGFPSVLRGGKYA-ATSQVLLPSKD-VMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp CCEEECCCEEETTEEE-EEEEEEECTTC-C---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred eeEEECCccccCCcEE-EEEEEEEcHHH-hcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 5310 0 000112222 23467776654 2 57899999999998876655555443
No 475
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.56 E-value=1.9e-14 Score=143.76 Aligned_cols=161 Identities=19% Similarity=0.404 Sum_probs=107.7
Q ss_pred CCCCCCcEEEEEEEeec--CCCeeEEEEcCcc--C------CC-------------Cceee------ecccEEEeCCCCC
Q psy12060 410 APKAGDKVRLECVAFGY--PVPSYNWTRRGSP--L------PR-------------NAYFE------NFNRILTIPNVKV 460 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~--p~~~v~W~~~~~~--l------~~-------------~~~~~------~~~~~L~i~~~~~ 460 (978)
.+.+|++++|.|.+.+. +.+.+.|+|.... + .. ..++. ....+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 90 (221)
T 3m8o_H 11 LVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLKS 90 (221)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCCG
T ss_pred EEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCCH
Confidence 45789999999999874 3578999985321 1 00 01111 1123699999999
Q ss_pred CCCeEEEEEEEeCC--CceEEEEEEEEE----eeceee-ccCCcccccCCCceeEEEEeec-CCC--CeeEEeECCEECC
Q psy12060 461 EDQGEYICRASNDR--SALESSVTISIQ----AEPNFT-IPLTDKHMDNQADLTWTCEAFG-VPD--VTYSWFRNGELLN 530 (978)
Q Consensus 461 ~d~G~Y~C~a~n~~--g~~~~~~~l~V~----~~p~~~-~~~~~~~~~~g~~~~l~C~~~~-~p~--~~i~W~~~g~~~~ 530 (978)
+|+|.|.|.+.+.. ......+.|.|. .+|.+. ..+... .+|+.++|.|.+.+ .|. +.+.|+++|..+.
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~ 168 (221)
T 3m8o_H 91 DDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVT 168 (221)
T ss_dssp GGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCE
T ss_pred HHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEECCEECc
Confidence 99999999999864 222334566665 245554 233322 78999999999998 665 5999999987663
Q ss_pred CCCCC--C-CCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCce
Q psy12060 531 SETLP--L-EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 574 (978)
Q Consensus 531 ~~~~~--~-~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~ 574 (978)
..... . .....+.+ ...|.|..... +|+|.|+|.|.|..+..
T Consensus 169 ~~~~~~~~~~~~~~~~~-~s~L~i~~~~~-~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 169 ARNFPPSQDASGDLYTT-SSQLTLPATQC-LAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp EEECCCEECSSSSCEEE-EEEEEEEGGGS-CTTCEEEEEEEETTSCC
T ss_pred eEEcCceeeCCCCcEEE-EEEEEECHHHc-CCCCeEEEEEEECCCCc
Confidence 21110 0 12333333 34688998875 89999999999987543
No 476
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.56 E-value=1.2e-14 Score=148.30 Aligned_cols=161 Identities=17% Similarity=0.273 Sum_probs=107.0
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC--------C---------Cceee------ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP--------R---------NAYFE------NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~--------~---------~~~~~------~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.+ .+.|.|+|+. ..+. . ..++. .....|.|.+++.+|
T Consensus 17 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 96 (261)
T 2xqy_G 17 LVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSED 96 (261)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCccc
Confidence 457999999999999876 5789999974 2210 0 11111 123589999999999
Q ss_pred CeEEEEEEEeCCCce---EEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEECCCCC
Q psy12060 463 QGEYICRASNDRSAL---ESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSET 533 (978)
Q Consensus 463 ~G~Y~C~a~n~~g~~---~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~~~~~ 533 (978)
+|.|.|.+.+..+.. ...+.|.|.. +|.+........+..|+.++|.|.+.+. |.+ .|.|++++..+....
T Consensus 97 sG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~ 176 (261)
T 2xqy_G 97 SAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT 176 (261)
T ss_dssp CEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEE
T ss_pred CeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEe
Confidence 999999999864321 1335777764 4555442322346789999999999875 665 999999987653110
Q ss_pred C-CCCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCc
Q psy12060 534 L-PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 573 (978)
Q Consensus 534 ~-~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~ 573 (978)
. .......+ .....|.|..... +| |.|+|.|.|....
T Consensus 177 ~~~~~~~g~~-~~~s~L~i~~~~~-~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 177 FPAVLQSDLY-TLSSSVTVTSSTW-PS-QSITCNVAHPASS 214 (261)
T ss_dssp CCCEEETTEE-EEEEEEEEETTTT-TT-SCCEEEEEEGGGT
T ss_pred cCceecCCcE-EEEEEEEEecccc-CC-CEEEEEEEECCCC
Confidence 0 00011222 2345788887764 67 9999999996544
No 477
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.56 E-value=5.4e-15 Score=151.89 Aligned_cols=161 Identities=16% Similarity=0.220 Sum_probs=106.8
Q ss_pred CCCCCCCcEEEEEEEeecCCCeeEEEEcC--ccCC--------C-----------Cce----eeecccEEEeCCCCCCCC
Q psy12060 409 EAPKAGDKVRLECVAFGYPVPSYNWTRRG--SPLP--------R-----------NAY----FENFNRILTIPNVKVEDQ 463 (978)
Q Consensus 409 ~~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~l~--------~-----------~~~----~~~~~~~L~i~~~~~~d~ 463 (978)
..+.+|++++|.|.+.+.|.+.+.|+|.. ..+. . ... ......+|.|.+++.+|+
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 91 (259)
T 3omz_A 12 VIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDS 91 (259)
T ss_dssp EEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGC
T ss_pred eEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccC
Confidence 35679999999999999888899999932 1110 0 000 011234699999999999
Q ss_pred eEEEEEEEeCCCc---eEEEEEEEEEee-----------------ceeeccCCcccccCCCceeEEEEeecC-CCCeeEE
Q psy12060 464 GEYICRASNDRSA---LESSVTISIQAE-----------------PNFTIPLTDKHMDNQADLTWTCEAFGV-PDVTYSW 522 (978)
Q Consensus 464 G~Y~C~a~n~~g~---~~~~~~l~V~~~-----------------p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~i~W 522 (978)
|.|.|.+.+..+. ....+.|.|..+ |.+...+....+.+|++++|.|.+.+. +.+.+.|
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W 171 (259)
T 3omz_A 92 GVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFW 171 (259)
T ss_dssp EEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEE
T ss_pred EEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEE
Confidence 9999999997662 334466777763 456666777788999999999998874 7899999
Q ss_pred eECC--EECCC-----CCCCCCCCCcEEEe------cCEEEEEeCCCCCCCeEEEEEEEcC
Q psy12060 523 FRNG--ELLNS-----ETLPLEDQDRYFIQ------DNVLTIRYLNPERDPAMYQCRAKNQ 570 (978)
Q Consensus 523 ~~~g--~~~~~-----~~~~~~~~~~~~~~------~~~l~i~~~~~~~d~G~Y~C~a~n~ 570 (978)
+|.+ ..+.. .........++.+. ...|+|.++.. +|+|.|.|.+.+.
T Consensus 172 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 172 YKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQL-EDSAKYFCALGES 231 (259)
T ss_dssp EEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCG-GGCSEEEEEEESC
T ss_pred eeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCCh-hHCEEEEEEEeCc
Confidence 9843 11100 00000112344443 23699999997 9999999999853
No 478
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.56 E-value=1.1e-14 Score=146.16 Aligned_cols=168 Identities=14% Similarity=0.207 Sum_probs=103.7
Q ss_pred cccCcEEEEEEeecCCC----CeEEEEEccc--cccccccc------ccCCCCCCceEee------cceEEEeCCCCCCC
Q psy12060 207 SILNDITLSCYAGGYPN----PSYEWFKEDY--VQDRLVAN------LIDPLSDKRFTLS------GGNLIINDPRQVED 268 (978)
Q Consensus 207 ~~g~~~~l~C~~~g~p~----~~v~W~~~~~--~~~~~~~~------~~~~~~~~~~~~~------~~~l~i~~~~~~~d 268 (978)
.+|++++|.|.+.+.|. +.|.|||++. .+..+... ...+....|+.+. +.+|.|.++ +.+|
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D 91 (228)
T 3bae_H 13 KPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV-DTAD 91 (228)
T ss_dssp CTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC-CGGG
T ss_pred cCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC-Cccc
Confidence 35777999999998875 8999999742 21111100 0111123455543 258999998 9999
Q ss_pred CeEEEEEEEeCce------e--EEeEEEEEEEee----ecccccCCCCeeeecccCeEEEeCCCCCCCCc-eEEEecccc
Q psy12060 269 RGSYHCKASNKFG------S--IISESVQLAFGF----IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPGV-NYYWARDYF 335 (978)
Q Consensus 269 ~G~Y~C~a~n~~g------~--~~s~~~~l~v~~----~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~~-~i~W~~~~~ 335 (978)
+|.|.|.+.|..| . .....+.|.|.. .|.+....+...+..|+.++|.|.+.+..|.+ .|+|+|++.
T Consensus 92 ~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~ 171 (228)
T 3bae_H 92 TATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 171 (228)
T ss_dssp CEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeCCc
Confidence 9999999998764 2 222346676653 12222222222345788899999986555776 999999987
Q ss_pred cccccccceEE----EeeCCcEEEeeeeeecceeeEEEEEeeccc
Q psy12060 336 PNFVEEDKRVF----VSYDGALYFSALEQIDAGNYSCNVQSKVSD 376 (978)
Q Consensus 336 ~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 376 (978)
.+......... ....+.|.|..+..+| |.|+|.|.|..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~ 215 (228)
T 3bae_H 172 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASS 215 (228)
T ss_dssp CTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred ccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCC
Confidence 53211111111 0112358888887756 9999999998753
No 479
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.56 E-value=1.9e-14 Score=146.51 Aligned_cols=163 Identities=20% Similarity=0.344 Sum_probs=110.0
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEcC--ccC------------C--CCcee--e---ecccEEEeCCCCCCCCeEEEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRRG--SPL------------P--RNAYF--E---NFNRILTIPNVKVEDQGEYIC 468 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~~--~~l------------~--~~~~~--~---~~~~~L~i~~~~~~d~G~Y~C 468 (978)
.+.+|++++|.|.+.+.|.+.|.|+|.. ..+ . ...++ . ....+|.|.+++.+|+|.|.|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 91 (245)
T 3nfj_J 12 VQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLC 91 (245)
T ss_dssp EEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred EecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEEE
Confidence 4568999999999999899999999932 110 0 00111 1 123479999999999999999
Q ss_pred EEEeCCC------ceEEEEEEEEEe------eceeec-cCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCCC
Q psy12060 469 RASNDRS------ALESSVTISIQA------EPNFTI-PLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSET 533 (978)
Q Consensus 469 ~a~n~~g------~~~~~~~l~V~~------~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~ 533 (978)
.+.+..| .....+.|.|.. +|.+.+ .+....+..|+.++|.|.+.|. |. +.+.|+|+|..+....
T Consensus 92 ~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 171 (245)
T 3nfj_J 92 AWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGV 171 (245)
T ss_dssp EEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred EEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCc
Confidence 9998332 222345677775 565543 3344446679999999999985 43 4799999999986432
Q ss_pred CCCC--------CCCcEEEecCEEEEEeCCCCCC-CeEEEEEEEcCCCc
Q psy12060 534 LPLE--------DQDRYFIQDNVLTIRYLNPERD-PAMYQCRAKNQLKT 573 (978)
Q Consensus 534 ~~~~--------~~~~~~~~~~~l~i~~~~~~~d-~G~Y~C~a~n~~g~ 573 (978)
.... +.+........|.|..... +| .|.|+|.|.|....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 172 CTDPQPLKEQPALNDSRYALSSRLRVSATFW-QNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EECSSCEESSSSSTTCCEEEEEEEEEEHHHH-TCTTCEEEEEEEECCBC
T ss_pred ccccccccccccCCCCCEEEEEEEEECHHHh-ccCCCeEEEEEEECCCC
Confidence 1100 0122222334688887765 56 67999999987544
No 480
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.56 E-value=6.2e-15 Score=124.65 Aligned_cols=86 Identities=14% Similarity=0.123 Sum_probs=70.7
Q ss_pred CCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceeeEEEEEEE
Q psy12060 887 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 966 (978)
Q Consensus 887 ~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A 966 (978)
++|.++.+.. ..+++.|+|+| |.++|++|++|+|+|+. ++.+|.........+. ..+.+.+|.|++.|+|||.|
T Consensus 9 ~pP~~l~v~~-~~~sv~L~W~p--P~~~~~~I~gY~vey~~-~~~~W~~~~~~~~~~~--t~~~v~~L~pg~~Y~FRV~A 82 (108)
T 1v5j_A 9 SPPRGLVAVR-TPRGVLLHWDP--PELVPKRLDGYVLEGRQ-GSQGWEVLDPAVAGTE--TELLVPGLIKDVLYEFRLVA 82 (108)
T ss_dssp CCCEEEEEEE-CSSSEEEEEEC--CSCCSSCCCBEEEEEEE-TTCCCEEEEEEECSSC--CEEECCCCCTTSCEECCBEE
T ss_pred CCCcceEEEE-eCCEEEEEECC--CCCCCCCCcEEEEEEEe-CCCCcEEeeeecCCCc--CEEEeCCCCCCCEEEEEEEE
Confidence 8999999975 46789999999 44689999999999998 5567886543332233 34779999999999999999
Q ss_pred ecCCCCCCCCCC
Q psy12060 967 INDVGPGPESEV 978 (978)
Q Consensus 967 ~n~~G~gp~S~~ 978 (978)
+|.+|.|++|++
T Consensus 83 ~n~~G~s~pS~~ 94 (108)
T 1v5j_A 83 FAGSFVSDPSNT 94 (108)
T ss_dssp EETTEEEEECSC
T ss_pred EcCCCCcCCCCC
Confidence 999999999974
No 481
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.56 E-value=4.3e-14 Score=143.93 Aligned_cols=169 Identities=19% Similarity=0.268 Sum_probs=113.6
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEee--------------CCEEecCC----CcEEEeecC----cEEEccccCCCCE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKK--------------DGNIIGSG----GRRKIFENG----NLLISPVSRDDSG 654 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~--------------~g~~~~~~----~~~~~~~~~----~l~i~~~~~~d~G 654 (978)
.+.+.+|++++|.| ..+.+.+.+.|+| ++...... .++.+...+ +|.|.+++.+|+|
T Consensus 11 ~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 89 (245)
T 4ei6_B 11 HQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSA 89 (245)
T ss_dssp EEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCE
T ss_pred eEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCE
Confidence 45588999999999 6677888999998 22222211 455554322 6999999999999
Q ss_pred EEEEEEEeC----CceeeeeEEEEEEe------CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccc
Q psy12060 655 IYSCTATNV----HGMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724 (978)
Q Consensus 655 ~Y~C~a~n~----~g~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~ 724 (978)
.|+|.+.+. .+.......|.|.. +|.+....+....+..|+.++|.|.+.+.+++.+.+.|+++|..+..
T Consensus 90 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~ 169 (245)
T 4ei6_B 90 VYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 169 (245)
T ss_dssp EEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCC
Confidence 999999953 22333445677763 34333333343445568999999999997666678899999998865
Q ss_pred ccccccc---------CCeeecCCceEEEeccCCCC-CEEEEEEEEcCCCcee
Q psy12060 725 MDLNELE---------TPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKIS 767 (978)
Q Consensus 725 ~~~~~~~---------~~~~~~~~~~l~i~~~~~~d-~g~Y~c~a~n~~G~~s 767 (978)
....... ...+. -...|.|.....+| .|.|+|.|.|......
T Consensus 170 ~~~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~~ 221 (245)
T 4ei6_B 170 GVCTDPQPLKEQPALNDSRYA-LSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp TEEECSSCEESSTTSTTCCEE-EEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred CcccccccccccccCCCCCEE-EEEEEEEcHHHhccCCCeEEEEEEECCCCCc
Confidence 3211000 00011 01347888887778 9999999998765433
No 482
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.55 E-value=8e-15 Score=125.75 Aligned_cols=94 Identities=21% Similarity=0.211 Sum_probs=73.4
Q ss_pred CCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCC-cceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCceee
Q psy12060 881 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP-NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 959 (978)
Q Consensus 881 ~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~-i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 959 (978)
++++|. +|.++.+...+.+ |.|+|++ |...||. |++|+|+|+..+..+|...............+.|.+|.|++.
T Consensus 3 ~~~~P~-~P~~~~~~~~~~~-v~l~W~~--P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 78 (105)
T 2haz_A 3 HMDTPS-SPSIDQVEPYSST-AQVQFDE--PEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETT 78 (105)
T ss_dssp CCCCCC-CCEEEEEEECSSC-EEEEEEC--CSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCE
T ss_pred CCCCCc-CCCCCEEEEcCCc-EEEEEcC--CcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCE
Confidence 456674 4999999888888 9999998 4667777 999999999988777754322211111223467999999999
Q ss_pred EEEEEEEecCCCCCCCCCC
Q psy12060 960 YEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 960 Y~~~V~A~n~~G~gp~S~~ 978 (978)
|.|+|+|+|.+|.|++|++
T Consensus 79 Y~~rV~A~n~~G~g~~S~~ 97 (105)
T 2haz_A 79 YAVRLAALNGKGLGEISAA 97 (105)
T ss_dssp EEEEEEEEETTEECCCCCC
T ss_pred EEEEEEEEcCCccCCCcCC
Confidence 9999999999999999974
No 483
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.55 E-value=4.7e-14 Score=140.22 Aligned_cols=169 Identities=17% Similarity=0.258 Sum_probs=108.6
Q ss_pred eeecCCCeEEEEEeeccC--CCCeeEEeeCC--EE---e-------------cCCCcEEEeecC---cEEEccccCCCCE
Q psy12060 598 TYAGEGGNVTIFCNPEAA--PKPKFVWKKDG--NI---I-------------GSGGRRKIFENG---NLLISPVSRDDSG 654 (978)
Q Consensus 598 ~~~~~g~~~~l~C~~~~~--p~~~i~W~~~g--~~---~-------------~~~~~~~~~~~~---~l~i~~~~~~d~G 654 (978)
+.+.+|++++|.|.+.+. +.+.+.|+|.. .. + ....++.+...+ +|.|.+++.+|+|
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (215)
T 3nl4_H 9 RLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTA 88 (215)
T ss_dssp CEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCE
T ss_pred EEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCE
Confidence 447899999999999774 35689998732 11 1 012344443333 3999999999999
Q ss_pred EEEEEEEeCCce----eeeeEEEEEE----eCCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccccc
Q psy12060 655 IYSCTATNVHGM----DESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 726 (978)
Q Consensus 655 ~Y~C~a~n~~g~----~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~~ 726 (978)
.|.|.+.|..+. ......|.|. .+|.+... ++...+..|+.++|.|.+.+.+++.+.+.|+++|..+....
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~ 167 (215)
T 3nl4_H 89 TYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPL-APCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRT 167 (215)
T ss_dssp EEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEE-CCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred EEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEe-cCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEe
Confidence 999999987652 2334567775 23333322 22334557999999999999877778889999987553211
Q ss_pred cccccCCeeecCCceEEE---eccCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy12060 727 LNELETPNINIDGGLLEI---TNASFADAGEYECVVKSTVGKISTKTTVI 773 (978)
Q Consensus 727 ~~~~~~~~~~~~~~~l~i---~~~~~~d~g~Y~c~a~n~~G~~s~~~~l~ 773 (978)
.......++.+.+ ..+...| |.|+|.|.|..|.......+.
T Consensus 168 -----~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 168 -----FPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp -----CCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred -----cCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 1112223344444 4456667 999999999998766555543
No 484
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.55 E-value=1.8e-14 Score=143.01 Aligned_cols=162 Identities=15% Similarity=0.288 Sum_probs=104.7
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcC--ccCC----------------CCceeee------cccEEEeCCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRG--SPLP----------------RNAYFEN------FNRILTIPNVKVEDQ 463 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~--~~l~----------------~~~~~~~------~~~~L~i~~~~~~d~ 463 (978)
.+.+|++++|.|.+.+.+ .+.|.|+|++ ..+. ...++.. ...+|.|.+++.+|+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 90 (215)
T 1c5d_H 11 LVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTEDT 90 (215)
T ss_dssp EECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGGC
T ss_pred eecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcccC
Confidence 557999999999998764 4789999964 2210 0112211 124899999999999
Q ss_pred eEEEEEEEeCCCc---eEEEEEEEEEe----eceeeccCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEECCCCCC
Q psy12060 464 GEYICRASNDRSA---LESSVTISIQA----EPNFTIPLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSETL 534 (978)
Q Consensus 464 G~Y~C~a~n~~g~---~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~~~~~~ 534 (978)
|.|.|.+.+..+. ....+.|.|.. +|.+...+....+.+|+.++|.|.+.|. |.+ .|.|+++|..+.....
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~ 170 (215)
T 1c5d_H 91 AIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTF 170 (215)
T ss_dssp EEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCCBC
T ss_pred EEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCceEec
Confidence 9999999986422 22335777763 4555543323346789999999999986 777 9999998865431100
Q ss_pred C-CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceee
Q psy12060 535 P-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 576 (978)
Q Consensus 535 ~-~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 576 (978)
. ....+.+.+ ...|. .... +| |.|+|.|.|..+....
T Consensus 171 ~~~~~~g~~~~-~s~L~--~~~~-~~-g~ytC~v~n~~~~~~~ 208 (215)
T 1c5d_H 171 PAVLQSGLYTL-TSSVT--SSTW-PS-QTVTCNVAHPASSTKV 208 (215)
T ss_dssp CCEEETTEEEE-EEEEE--ESST-TT-SCCEEEEEEGGGTEEE
T ss_pred CcccCCCCEEE-EEEEe--cccC-CC-CeEEEEEEeCCCCccE
Confidence 0 001122222 12333 3332 45 9999999998876543
No 485
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.55 E-value=4.9e-15 Score=148.25 Aligned_cols=194 Identities=15% Similarity=0.269 Sum_probs=105.0
Q ss_pred eEEEEEEEeCCCceEEEEEEEEEeecee-eccCCccc-ccCCCceeEEEEeecCC----CCeeEEeECCEECCCCCCC--
Q psy12060 464 GEYICRASNDRSALESSVTISIQAEPNF-TIPLTDKH-MDNQADLTWTCEAFGVP----DVTYSWFRNGELLNSETLP-- 535 (978)
Q Consensus 464 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~~~p----~~~i~W~~~g~~~~~~~~~-- 535 (978)
|.|.|..++..+.. ..... ..+|.+ ..++.... +..|+.++|.|.+.|.. .++|+|+|||..+......
T Consensus 1 ~~~~~~~~~~~~~c--~~~~~-~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~ 77 (240)
T 4acp_A 1 GTKSCDKTHTCPPC--PAPEL-LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR 77 (240)
T ss_dssp -------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCC
T ss_pred CceeeeeeecCCCC--Ccccc-CCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccc
Confidence 78999999876542 11111 224443 34555555 66799999999999863 4589999999988542110
Q ss_pred -CCCCCcEEEecCEEEEEeCCCCCCCeEEEEEEEcCCCceeeEEEEEE---EEcCCccccCCCCcceeecCCCeEEEEEe
Q psy12060 536 -LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRV---LTLKPSFKKRPLESETYAGEGGNVTIFCN 611 (978)
Q Consensus 536 -~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v---~~~~p~~~~~~~~~~~~~~~g~~~~l~C~ 611 (978)
......+. ....|.|..... +|.|.|+|.|.|..+.......+.. ...+|.+.+.+.... ...|+.++|.|.
T Consensus 78 ~~~~~g~~~-~~s~L~i~~~~~-~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~--~~~g~~~~L~C~ 153 (240)
T 4acp_A 78 EEQYNSTYR-VVSVLTVLHQDW-LNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRD--ELTKNQVSLTCL 153 (240)
T ss_dssp EEC---CEE-EEEEEECCHHHH-HHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGG--GGGSSEEEEEEE
T ss_pred eECCCCeEE-EEEEEEEechhc-cCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChH--HhcCCceEEEEE
Confidence 00122222 224666665543 6789999999998764322222221 123455544333222 234899999999
Q ss_pred ecc-CCCC-eeEEeeCCEEecCCCc--EEEeecCc------EEEccccCCCCEEEEEEEEeCC
Q psy12060 612 PEA-APKP-KFVWKKDGNIIGSGGR--RKIFENGN------LLISPVSRDDSGIYSCTATNVH 664 (978)
Q Consensus 612 ~~~-~p~~-~i~W~~~g~~~~~~~~--~~~~~~~~------l~i~~~~~~d~G~Y~C~a~n~~ 664 (978)
+.+ +|.+ .+.|+++|..+..... .....+++ |.|.....++.|.|+|.|.+..
T Consensus 154 ~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 154 VKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp EEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred EeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 999 4554 8999999988643211 11122333 5566555567899999999875
No 486
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.55 E-value=2.2e-14 Score=149.68 Aligned_cols=161 Identities=17% Similarity=0.304 Sum_probs=108.6
Q ss_pred CCCCCCcEEEEEEEeecC--CCeeEEEEcCc--cCC-----------------CCcee--e----ecccEEEeCCCCCCC
Q psy12060 410 APKAGDKVRLECVAFGYP--VPSYNWTRRGS--PLP-----------------RNAYF--E----NFNRILTIPNVKVED 462 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p--~~~v~W~~~~~--~l~-----------------~~~~~--~----~~~~~L~i~~~~~~d 462 (978)
.+.+|++++|.|.+.+.| .+.+.|+|++. .+. ...++ . ....+|.|.+++.+|
T Consensus 33 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 112 (291)
T 2gki_A 33 LVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSED 112 (291)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGGG
T ss_pred EecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHHH
Confidence 457999999999998876 57899999642 110 00111 1 123579999999999
Q ss_pred CeEEEEEEEeCC-Cce----EEEEEEEEEe----------------eceeeccCCcccccCCCceeEEEEeecCCCC---
Q psy12060 463 QGEYICRASNDR-SAL----ESSVTISIQA----------------EPNFTIPLTDKHMDNQADLTWTCEAFGVPDV--- 518 (978)
Q Consensus 463 ~G~Y~C~a~n~~-g~~----~~~~~l~V~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--- 518 (978)
+|.|.|.+.+.. |.. ...+.|.|.. ++.+...+....+.+|++++|.|.+.+.+.+
T Consensus 113 sG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~ 192 (291)
T 2gki_A 113 SAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRT 192 (291)
T ss_dssp CEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCEETTT
T ss_pred CEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccccccc
Confidence 999999999874 211 1234677766 2334445556678999999999999887765
Q ss_pred ---eeEEeEC--CEECC----CCC-CCCCCCCcEEEe----cCEEEEEeCCCCCCCeEEEEEEEcCC
Q psy12060 519 ---TYSWFRN--GELLN----SET-LPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQL 571 (978)
Q Consensus 519 ---~i~W~~~--g~~~~----~~~-~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y~C~a~n~~ 571 (978)
.+.|+|+ |..+. ... .......++... ...|+|.++.. +|+|.|+|.|.|..
T Consensus 193 ~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 193 RKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQA-EDLAVYYCKQSYYH 258 (291)
T ss_dssp TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEEEEEEEETT
T ss_pred cceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCH-HHCEEEEEEEccCC
Confidence 8999995 22111 000 000012344332 23799999996 99999999999854
No 487
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.55 E-value=2.1e-14 Score=146.13 Aligned_cols=170 Identities=16% Similarity=0.196 Sum_probs=113.1
Q ss_pred ceeecCCCeEEEEEeeccCCCCeeEEeeC--CEEe--------------cCCCcEEEee----cCcEEEccccCCCCEEE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNII--------------GSGGRRKIFE----NGNLLISPVSRDDSGIY 656 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p~~~i~W~~~--g~~~--------------~~~~~~~~~~----~~~l~i~~~~~~d~G~Y 656 (978)
.+.+.+|++++|.|.+.+.+.+.+.|+|. +..+ ....++.+.. ..+|.|.+++.+|+|.|
T Consensus 10 ~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 89 (245)
T 3nfj_J 10 TLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFY 89 (245)
T ss_dssp EEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred eEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEE
Confidence 45578999999999999989999999982 2110 0113333332 22599999999999999
Q ss_pred EEEEEeCCc------eeeeeEEEEEEe------CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEccc
Q psy12060 657 SCTATNVHG------MDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 724 (978)
Q Consensus 657 ~C~a~n~~g------~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~ 724 (978)
+|.+.|..| .......|.|.. +|.+....+....+..|+.++|.|.+.+.+++.+.+.|+++|..+..
T Consensus 90 ~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 169 (245)
T 3nfj_J 90 LCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHS 169 (245)
T ss_dssp EEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCC
Confidence 999998432 222345677765 33333222333334458999999999997766788899999998865
Q ss_pred cccccc---------cCCeeecCCceEEEeccCCCC-CEEEEEEEEcCCCcee
Q psy12060 725 MDLNEL---------ETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKIS 767 (978)
Q Consensus 725 ~~~~~~---------~~~~~~~~~~~l~i~~~~~~d-~g~Y~c~a~n~~G~~s 767 (978)
...... ....+. -...|.|......| .|.|+|.|.|......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 170 GVCTDPQPLKEQPALNDSRYA-LSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp TEEECSSCEESSSSSTTCCEE-EEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred CcccccccccccccCCCCCEE-EEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 221100 001111 11367787777777 6799999999876544
No 488
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.55 E-value=6.4e-15 Score=131.73 Aligned_cols=100 Identities=20% Similarity=0.333 Sum_probs=80.9
Q ss_pred CCCCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccc---e---eeeeeeccceeEEEEE
Q psy12060 877 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF---Q---SETLKEYGNVGIAVVR 950 (978)
Q Consensus 877 ~~~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~---~---~~~~~~~~~~~~~~~~ 950 (978)
.++|.+++|+.+|.++++...+.++|.|+|++|+....||.|++|+|+|+..+...+ . ........+. ..+.
T Consensus 6 ~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 83 (125)
T 1uen_A 6 SGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSK--THGM 83 (125)
T ss_dssp CCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSC--SEEE
T ss_pred EEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCc--cEEE
Confidence 678999999999999999999999999999997667789999999999988764433 1 1111122222 3467
Q ss_pred cCCCCceeeEEEEEEEecCCCCCCCCCC
Q psy12060 951 IPSEFYYTEYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 951 l~~L~p~t~Y~~~V~A~n~~G~gp~S~~ 978 (978)
|.+|.|++.|.|+|+|+|.+|.||+|++
T Consensus 84 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~ 111 (125)
T 1uen_A 84 LPGLEPFSHYTLNVRVVNGKGEGPASPD 111 (125)
T ss_dssp EESCCSSCEEEEEEEEEESSCEEEECCC
T ss_pred eCCCCCCCEEEEEEEEecCCCCCCCCCC
Confidence 8999999999999999999999999864
No 489
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.55 E-value=5.2e-14 Score=145.43 Aligned_cols=169 Identities=19% Similarity=0.253 Sum_probs=114.2
Q ss_pred cceeecCCCeEEEEEeeccCCCCeeEEee--CCEE------------ecCC----CcEEEee----cCcEEEccccCCCC
Q psy12060 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNI------------IGSG----GRRKIFE----NGNLLISPVSRDDS 653 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~--~g~~------------~~~~----~~~~~~~----~~~l~i~~~~~~d~ 653 (978)
..+.+.+|++++|.|.+. .+.+.+.|+| .+.. .... .++.+.. +.+|.|.+++.+|+
T Consensus 34 ~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 112 (268)
T 3pl6_D 34 SNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDS 112 (268)
T ss_dssp SEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGC
T ss_pred CEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccC
Confidence 445688999999999986 5677999998 2221 1111 4555543 34599999999999
Q ss_pred EEEEEEEEeC--CceeeeeEEEEEEe------CCceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeCCEEcccc
Q psy12060 654 GIYSCTATNV--HGMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 725 (978)
Q Consensus 654 G~Y~C~a~n~--~g~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~g~~~~~~ 725 (978)
|.|+|.+.|. .+.......|.|.. +|.+....+....+..|+.++|.|.+.+.+++.+.+.|+++|..+...
T Consensus 113 G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~ 192 (268)
T 3pl6_D 113 AVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG 192 (268)
T ss_dssp EEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTT
T ss_pred EEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCCC
Confidence 9999999983 33444455677765 343333333334445689999999999988777788999999888542
Q ss_pred ccccc---------cCCeeecCCceEEEeccCCCC-CEEEEEEEEcCCCce
Q psy12060 726 DLNEL---------ETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKI 766 (978)
Q Consensus 726 ~~~~~---------~~~~~~~~~~~l~i~~~~~~d-~g~Y~c~a~n~~G~~ 766 (978)
..... ....+. -...|.|.....+| .|.|+|.|.|.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~-~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 193 VCTDPQPLKEQPALNDSRYS-LSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp EEECSSCEESSTTCTTCCEE-EEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred eEeccccccccccCCCCcEE-EEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 11000 001111 11356777777777 999999999986643
No 490
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.55 E-value=8.2e-15 Score=130.07 Aligned_cols=116 Identities=21% Similarity=0.386 Sum_probs=96.8
Q ss_pred CCCceeeeEEEEEcCCCCCCCce--EEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecC
Q psy12060 762 TVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 839 (978)
Q Consensus 762 ~~G~~s~~~~l~v~~~P~~P~~~--~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~ 839 (978)
..|..+.++.+.+..+|.+|.++ ++...+.+++.|+|.+|.+++++|.+|.|+|+..+ ..|..+..... .
T Consensus 2 ~~G~~~~s~~l~v~~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~-------~ 73 (121)
T 1wf5_A 2 SSGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLASVD-------P 73 (121)
T ss_dssp CCCCCCCCCCSSCCCCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEESSCC-------T
T ss_pred CCCcccceEEEEEeeCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEcccC-------C
Confidence 36777888889999999999999 88888899999999999888889999999999865 67866521111 2
Q ss_pred CceeeEEeeccCCCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCC
Q psy12060 840 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886 (978)
Q Consensus 840 ~~~~~~~~~~L~p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~ 886 (978)
....+++.+ |.|++.|.|||+|.|..|.|++|..+..++|++.+|.
T Consensus 74 ~~~~~~v~~-L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~P~ 119 (121)
T 1wf5_A 74 KATSVTVKG-LVPARSYQFRLCAVNDVGKGQFSKDTERVSLPESGPS 119 (121)
T ss_dssp TCCEEEEES-CCTTCEEEEEEEEEESSCEEEECCCCSCEECCCCSSC
T ss_pred CccEEEECC-cCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCCCCC
Confidence 456789999 9999999999999999999999998756788777764
No 491
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.55 E-value=9.4e-14 Score=140.70 Aligned_cols=176 Identities=13% Similarity=0.191 Sum_probs=107.0
Q ss_pred eEeCCCceEecCCCccccCcEEEEEEeecC--CCCeEEEEEcc--ccccccccc------ccCCC-CCCceEee------
Q psy12060 192 FIKQPTDVVFDLSKRSILNDITLSCYAGGY--PNPSYEWFKED--YVQDRLVAN------LIDPL-SDKRFTLS------ 254 (978)
Q Consensus 192 ~~~~p~~~~~~~~~~~~g~~~~l~C~~~g~--p~~~v~W~~~~--~~~~~~~~~------~~~~~-~~~~~~~~------ 254 (978)
++..|....+. +|++++|.|.+.+. +.+.+.|||++ ..+..+... ..... .+.|+.+.
T Consensus 4 v~q~p~~v~~~-----~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 78 (242)
T 1hxm_B 4 LEQPQISSTKT-----LSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETS 78 (242)
T ss_dssp EECCCSEEEEE-----TTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTT
T ss_pred cCcCCceEEec-----CCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCc
Confidence 33445555543 46679999999875 66899999964 221111100 01111 34565542
Q ss_pred cceEEEeCCCCCCCCeEEEEEEEeCc------eeEEeEEEEEEEeee-------cccccC-CCCeeeecccCeEEEeCCC
Q psy12060 255 GGNLIINDPRQVEDRGSYHCKASNKF------GSIISESVQLAFGFI-------GEFNLK-RAPEIGNQNWGKAMFCDPP 320 (978)
Q Consensus 255 ~~~l~i~~~~~~~d~G~Y~C~a~n~~------g~~~s~~~~l~v~~~-------~~~~~~-~~~~~~~~~~~~~l~C~~~ 320 (978)
+.+|.|.++ +.+|+|.|.|.+.+.. .......+.|.|... |...+. +....+..|+.++|.|.+.
T Consensus 79 ~~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~ 157 (242)
T 1hxm_B 79 TSTLTIHNV-EKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLE 157 (242)
T ss_dssp EEEEEECSC-CGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEE
T ss_pred EEEEEECCC-CcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEe
Confidence 347999997 8999999999999863 112234567777542 222221 1222344588899999996
Q ss_pred CCCCC-ceEEEecccc-cccccccceEEEeeC------CcEEEeeeeeecceeeEEEEEeeccc
Q psy12060 321 TNYPG-VNYYWARDYF-PNFVEEDKRVFVSYD------GALYFSALEQIDAGNYSCNVQSKVSD 376 (978)
Q Consensus 321 ~~~p~-~~i~W~~~~~-~~~~~~~~~~~~~~~------~~L~i~~~~~~d~G~Y~C~~~n~~~~ 376 (978)
+..|. +.|+|+|++. ++......... ..+ +.|.|..+.. | |.|+|.|.|..+.
T Consensus 158 g~~P~~~~v~W~~~~~~~l~~~~~~~~~-~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~ 218 (242)
T 1hxm_B 158 KFFPDVIKIHWEEKKSNTILGSQEGNTM-KTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNK 218 (242)
T ss_dssp EESSCCEEEEEEESSSCCCCCCEECCCE-ECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSG
T ss_pred eEECCCeEEEEEcCCCEeecCcccccee-cCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCC
Confidence 55575 7999999987 43211111111 122 2577776664 5 9999999998754
No 492
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.55 E-value=6.8e-15 Score=147.22 Aligned_cols=161 Identities=19% Similarity=0.304 Sum_probs=106.1
Q ss_pred CCCCCcEEEEEEEeecC----CCeeEEEEcCccCCCCcee---e------ecccEEEeCCCCCCCCeEEEEEEEeCCCc-
Q psy12060 411 PKAGDKVRLECVAFGYP----VPSYNWTRRGSPLPRNAYF---E------NFNRILTIPNVKVEDQGEYICRASNDRSA- 476 (978)
Q Consensus 411 v~~G~~~~l~C~~~g~p----~~~v~W~~~~~~l~~~~~~---~------~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~- 476 (978)
+..|+.++|.|.+.|.+ ..+|+|+|+|.++...... . .....|.|.....+|.|.|+|+|.+..+.
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~ 115 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 115 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----
T ss_pred cccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCc
Confidence 44699999999999864 2389999999987543211 0 11246888877777899999999998764
Q ss_pred -eEEEEEE--EEEeeceeeccCCcccccCCCceeEEEEeecC-CC-CeeEEeECCEECCCCCCC--CCCCCcEEEecCEE
Q psy12060 477 -LESSVTI--SIQAEPNFTIPLTDKHMDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSETLP--LEDQDRYFIQDNVL 549 (978)
Q Consensus 477 -~~~~~~l--~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~--~~~~~~~~~~~~~l 549 (978)
....+.+ .+..+|.+.+.+.......|+.++|.|.+.++ |. ..++|+|||..+...... ....+........|
T Consensus 116 ~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L 195 (240)
T 4acp_A 116 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKL 195 (240)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEE
T ss_pred cccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEE
Confidence 3334432 24467777765544444459999999999984 54 489999999987532110 00112222333466
Q ss_pred EEEeCCCCCCCeEEEEEEEcCCC
Q psy12060 550 TIRYLNPERDPAMYQCRAKNQLK 572 (978)
Q Consensus 550 ~i~~~~~~~d~G~Y~C~a~n~~g 572 (978)
.+..... .+.|.|+|.+.+..-
T Consensus 196 ~v~~~~~-~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 196 TVDKSRW-QQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEEHHHH-HTTCCEEEEEECTTS
T ss_pred EEChHHh-CCCCEEEEEEEECCC
Confidence 6665442 578999999998753
No 493
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.55 E-value=2.5e-15 Score=150.89 Aligned_cols=175 Identities=10% Similarity=0.054 Sum_probs=104.5
Q ss_pred Cee-EeCCCceEecCCCccccCcEEEEEEeecC-CC-C-eEEEEEccccc-ccccccccCCCCCCceEeecceEEEeCCC
Q psy12060 190 PYF-IKQPTDVVFDLSKRSILNDITLSCYAGGY-PN-P-SYEWFKEDYVQ-DRLVANLIDPLSDKRFTLSGGNLIINDPR 264 (978)
Q Consensus 190 P~~-~~~p~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~-~v~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 264 (978)
|.+ +..|....+ .+|+.++|.|.+.|. |. | .|+|+|+|..+ ...... .....+..+. ....|.|.++
T Consensus 13 P~v~~~~p~~~~v-----~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~-~~~~~~g~~~-~~s~L~I~~~- 84 (231)
T 2w59_A 13 IQLYAIPPSPGEL-----YISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMV-LQEHFNGTYS-ASSAVPVSTQ- 84 (231)
T ss_dssp CEEEEECCCHHHH-----HTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCE-EEECTTSCEE-EEEEEECCHH-
T ss_pred CEEEEeCcChhhc-----ccCCceEEEEEEeCccCCCCeEEEEEcCCeecccccccc-ceECCCCcEE-EEEEEEecch-
Confidence 443 455655433 356779999999984 64 4 99999998765 211100 0011122232 2346888876
Q ss_pred CCCCCeEEEEEEEeCceeEEeEEEEEEEee------ecccccCCCCeeeecccCeEEEeCCCCCCCC-ceEEEecccccc
Q psy12060 265 QVEDRGSYHCKASNKFGSIISESVQLAFGF------IGEFNLKRAPEIGNQNWGKAMFCDPPTNYPG-VNYYWARDYFPN 337 (978)
Q Consensus 265 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~v~~------~~~~~~~~~~~~~~~~~~~~l~C~~~~~~p~-~~i~W~~~~~~~ 337 (978)
+.+|+|.|+|.|.|..+. ..+++.|.. +|.+.+.........+..++|.|.+.+..|+ +.|+|+|||.++
T Consensus 85 ~~~D~g~Y~C~~~~~~~~---~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l 161 (231)
T 2w59_A 85 DWLSGERFTCTVQHEELP---LPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAV 161 (231)
T ss_dssp HHHTTCCEEEEEECTTCS---SCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred hccCCCEEEEEEEcCCCC---CceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEEC
Confidence 789999999999998764 233444432 2222111111111123458999999654564 799999999875
Q ss_pred ccccc--ceEEEe--------eC-C------cEEEeeeeeecceeeEEEEEeecc
Q psy12060 338 FVEED--KRVFVS--------YD-G------ALYFSALEQIDAGNYSCNVQSKVS 375 (978)
Q Consensus 338 ~~~~~--~~~~~~--------~~-~------~L~i~~~~~~d~G~Y~C~~~n~~~ 375 (978)
..... ...... .+ + .|.|.....+|.|.|+|+|.|...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 162 PATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp CGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 43220 001111 23 3 366777777789999999999753
No 494
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.54 E-value=4.7e-14 Score=143.11 Aligned_cols=166 Identities=17% Similarity=0.187 Sum_probs=113.5
Q ss_pred ceeecCCCeEEEEEeeccCC----CCeeEEeeCC--EE---ec---------CCCcEEEeecC---cEEEccccCCCCEE
Q psy12060 597 ETYAGEGGNVTIFCNPEAAP----KPKFVWKKDG--NI---IG---------SGGRRKIFENG---NLLISPVSRDDSGI 655 (978)
Q Consensus 597 ~~~~~~g~~~~l~C~~~~~p----~~~i~W~~~g--~~---~~---------~~~~~~~~~~~---~l~i~~~~~~d~G~ 655 (978)
...+.+|++++|.|.+.+.| .+.+.|+|++ .. +. ...++.+...+ +|.|.+++.+|+|.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (240)
T 1moe_A 10 SLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVAT 89 (240)
T ss_dssp EEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEE
Confidence 34578999999999999988 7799999852 21 10 12344444333 59999999999999
Q ss_pred EEEEEEeCCce-eeeeEEEEEEeCC-----ceeeeCCCceEEEccccEEEEEEeeecCCcCeEEEEeeC--CEEccc---
Q psy12060 656 YSCTATNVHGM-DESKGRLIVLHGP-----SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIGN--- 724 (978)
Q Consensus 656 Y~C~a~n~~g~-~~~~~~l~v~~~p-----~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~~W~~~--g~~~~~--- 724 (978)
|+|.|.|..+. ......|.|..++ ......+....+..|+.++|.|.+.+.|.+...+.|+++ +..+..
T Consensus 90 Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~ 169 (240)
T 1moe_A 90 YYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGR 169 (240)
T ss_dssp EEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEE
T ss_pred EEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEE
Confidence 99999998664 3345677776643 233334556778899999999999998765456799985 222100
Q ss_pred ----ccc---ccccCCeeec------CCceEEEeccCCCCCEEEEEEEEcC
Q psy12060 725 ----MDL---NELETPNINI------DGGLLEITNASFADAGEYECVVKST 762 (978)
Q Consensus 725 ----~~~---~~~~~~~~~~------~~~~l~i~~~~~~d~g~Y~c~a~n~ 762 (978)
... ......++.. ....|.|.++..+|+|.|+|.|.+.
T Consensus 170 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 170 IDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp EETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred EcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 000 0000112221 1247999999999999999999853
No 495
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.54 E-value=6e-14 Score=143.65 Aligned_cols=179 Identities=15% Similarity=0.191 Sum_probs=116.0
Q ss_pred cceeecCCCeEEEEEeeccCCCCeeEEeeCC--EE---e----------cCCCcEEEe-----ecCcEEEccccCCCCEE
Q psy12060 596 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NI---I----------GSGGRRKIF-----ENGNLLISPVSRDDSGI 655 (978)
Q Consensus 596 ~~~~~~~g~~~~l~C~~~~~p~~~i~W~~~g--~~---~----------~~~~~~~~~-----~~~~l~i~~~~~~d~G~ 655 (978)
..+.+.+|++++|.|.+.+.|.+.+.|+|.. .. + ....++.+. ...+|.|.+++.+|+|.
T Consensus 11 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~ 90 (256)
T 3tf7_C 11 ARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAV 90 (256)
T ss_dssp SEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSE
T ss_pred ceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEE
Confidence 3456889999999999999999999999832 11 1 112333332 12259999999999999
Q ss_pred EEEEEEeCCce----eeeeEEEEEEe-------------------CCceeeeCCCceEEEccccEEEEEEeeecCCcCeE
Q psy12060 656 YSCTATNVHGM----DESKGRLIVLH-------------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 712 (978)
Q Consensus 656 Y~C~a~n~~g~----~~~~~~l~v~~-------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~ 712 (978)
|+|.|.|..+. ......|.|.. .+..+...+..+.+..|+.++|.|.+.+. .+ .
T Consensus 91 Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~--~ 167 (256)
T 3tf7_C 91 YFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS-HN--Y 167 (256)
T ss_dssp EEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC-CS--E
T ss_pred EEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-ce--E
Confidence 99999997652 22235677764 13334455667778899999999999876 33 5
Q ss_pred EEEeeCC--EEc---cc---cccccc--cCCee-----ecCCceEEEeccCCCCCEEEEEEEEcCCCcee--eeEEEEEc
Q psy12060 713 YIWTHNG--VRI---GN---MDLNEL--ETPNI-----NIDGGLLEITNASFADAGEYECVVKSTVGKIS--TKTTVIVE 775 (978)
Q Consensus 713 ~~W~~~g--~~~---~~---~~~~~~--~~~~~-----~~~~~~l~i~~~~~~d~g~Y~c~a~n~~G~~s--~~~~l~v~ 775 (978)
+.|++.. ... .. ...... ...++ ......|+|.++..+|+|.|+|.|.|..|... .-..|.|.
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~ 247 (256)
T 3tf7_C 168 MYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSKLTVL 247 (256)
T ss_dssp EEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeEEEEE
Confidence 6888732 111 00 000000 00111 11234899999999999999999999887532 23455555
Q ss_pred CC
Q psy12060 776 GP 777 (978)
Q Consensus 776 ~~ 777 (978)
.+
T Consensus 248 ~~ 249 (256)
T 3tf7_C 248 EL 249 (256)
T ss_dssp CG
T ss_pred cc
Confidence 43
No 496
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1e-14 Score=125.08 Aligned_cols=94 Identities=20% Similarity=0.304 Sum_probs=78.0
Q ss_pred CCCCCCCCCCCCceeecccccCcEEEEEEeCCCCCCCCCcceEEEEEEecCCccceeeeeeeccceeEEEEEcCCCCcee
Q psy12060 879 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 958 (978)
Q Consensus 879 ~t~~~~P~~~P~~~~~~~~~~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t 958 (978)
.|.++.|+.+|.++.+...+.++|.|+|++|+....||.|++|.|+|+..+...|..... +. ..+.|.+|.|++
T Consensus 2 ~t~e~~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~----~~--~~~~i~~L~p~t 75 (103)
T 2edy_A 2 SSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT----TD--TRFTLTGLKPDT 75 (103)
T ss_dssp TTTCCCCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE----SS--SCCEECSCCTTC
T ss_pred CCCCCCCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC----Cc--ceEEEcCCCCCC
Confidence 366788889999999999999999999999655788999999999999887644433211 11 236689999999
Q ss_pred eEEEEEEEecCCCCCCCCCC
Q psy12060 959 EYEVKVQAINDVGPGPESEV 978 (978)
Q Consensus 959 ~Y~~~V~A~n~~G~gp~S~~ 978 (978)
.|.|+|+|+|.+|.|++|++
T Consensus 76 ~Y~~~V~A~n~~G~g~~S~~ 95 (103)
T 2edy_A 76 TYDIKVRAWTSKGSGPLSPS 95 (103)
T ss_dssp CEEEECCEECSSCBCCCCCC
T ss_pred EEEEEEEEECCCCCCCCCCC
Confidence 99999999999999999974
No 497
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=99.54 E-value=1.7e-14 Score=143.93 Aligned_cols=187 Identities=14% Similarity=0.097 Sum_probs=126.2
Q ss_pred CCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCcee--eEEeeccCCCcee
Q psy12060 779 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE--ASIENVLVPWSTY 856 (978)
Q Consensus 779 ~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~~~~L~p~~~Y 856 (978)
..|.++.+.......++++|+++.+.++..+.|.|.|+..+ ..|..+...... ......... +.+.+ +..++.|
T Consensus 22 ~~P~nl~C~~~~~~~l~C~W~~~~~~~~~~~~y~l~y~~~~-~~~~~C~~~~~~--~~~~~~~~~C~~~~~~-~~~~~~y 97 (227)
T 1eer_B 22 RGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLED-EPWKLCRLHQAP--TARGAVRFWCSLPTAD-TSSFVPL 97 (227)
T ss_dssp HSTTSCEEEBSSSSCCEEEEEESCCSSCCTTSEEEEEEETT-SCCEEECEEEEE--ETTTEEEEEEECCGGG-CCBSSCE
T ss_pred cCCcCCeEECCCCCEEEEEecCCCCCCCCCccEEEEEEcCC-CCceeccceecc--CCCCCceEEEEeCCCc-ceeeEEE
Confidence 46889999888888999999998876656789999998753 335444211000 000001111 12235 7788999
Q ss_pred EEEEEEecCCccCCCCCCCCCCCCCCCCCCCCCCceeecccc-cCcEEEEEEeCCCCCCCCCcceEEEEEEecCCcccee
Q psy12060 857 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK-IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 935 (978)
Q Consensus 857 ~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~~~P~~~~~~~~~-~~si~v~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~ 935 (978)
.|+|.|.|..+ ..+. .+.+.+.+++.+|.++++...+ .+.+.|+|++|.....++ +..|.|+|+..++..|..
T Consensus 98 ~~~V~a~~~~~--~~~~---~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~-~l~Yev~y~~~~~~~w~~ 171 (227)
T 1eer_B 98 ELRVTAASGAP--RYHR---VIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTS-HIRYEVDVSAGQGAGSVQ 171 (227)
T ss_dssp EEEEEETTSCE--EEEE---EECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSCGG-GEEEEEEEECCSSSCCCC
T ss_pred EEEEEecCCCc--cEEE---EEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCccccc-ceEEEEEEEcCCCCCcEE
Confidence 99999987443 2211 3445555667899999998774 789999999965443344 899999999887766764
Q ss_pred eeeeeccceeEEEEEcCCCCceeeEEEEEEEecCC----CC-CCCCCC
Q psy12060 936 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV----GP-GPESEV 978 (978)
Q Consensus 936 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~----G~-gp~S~~ 978 (978)
... ...+. ..+.|.+|.|++.|.|+|+|.+.. |. |++|++
T Consensus 172 ~~~-~~~~~--~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~ 216 (227)
T 1eer_B 172 RVE-ILEGR--TECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEP 216 (227)
T ss_dssp EEE-ECTTC--CEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCC
T ss_pred EEE-EecCc--eEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCC
Confidence 211 11222 346689999999999999999752 33 777753
No 498
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.54 E-value=1.3e-14 Score=122.66 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=81.0
Q ss_pred cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEeeccccCceEecccccceeeeecCCceeeEEeeccCCCc
Q psy12060 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 854 (978)
Q Consensus 775 ~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~ 854 (978)
..||++|.++.+.. ..+++.|+|.+|.+++++|++|.|+|+. ....|..+...+ ....+.+++.+ |.+++
T Consensus 5 pep~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~~~-------~~~~t~~~v~~-L~pg~ 74 (108)
T 1v5j_A 5 SSGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDPAV-------AGTETELLVPG-LIKDV 74 (108)
T ss_dssp CCCCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEEEE-------CSSCCEEECCC-CCTTS
T ss_pred CCCCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeeeec-------CCCcCEEEeCC-CCCCC
Confidence 35789999999865 5688999999999988999999999998 567798654321 13567889999 99999
Q ss_pred eeEEEEEEecCCccCCCCCCCCCCCCCC
Q psy12060 855 TYEFKVIAGNELGYGEPSSPSPQYNTPA 882 (978)
Q Consensus 855 ~Y~~~v~A~N~~G~g~~s~~~~~~~t~~ 882 (978)
.|+|||.|.|..|.|++|+.. .++|..
T Consensus 75 ~Y~FRV~A~n~~G~s~pS~~~-~v~T~~ 101 (108)
T 1v5j_A 75 LYEFRLVAFAGSFVSDPSNTA-NVSTSG 101 (108)
T ss_dssp CEECCBEEEETTEEEEECSCC-CCCCSS
T ss_pred EEEEEEEEEcCCCCcCCCCCE-EEEeCC
Confidence 999999999999999999987 666654
No 499
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.54 E-value=9.1e-15 Score=129.88 Aligned_cols=105 Identities=21% Similarity=0.400 Sum_probs=88.2
Q ss_pred cCCCCCCCceEEEEeeCCeeEEEeecCCCCCCCceeEEEEEee---ccccCceEecccccceeeeecCCceeeEEeeccC
Q psy12060 775 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART---NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 851 (978)
Q Consensus 775 ~~~P~~P~~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~---~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 851 (978)
.++|.+|.++++..++.+++.|+|.+|.++|++|++|.|+|+. .....|..+.... .......+++.+ |.
T Consensus 15 ~~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~------~~~~~~~~~v~~-L~ 87 (124)
T 1wis_A 15 PELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS------NEPDARSMEVPD-LN 87 (124)
T ss_dssp CCCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE------SCTTCSEEEECS-CC
T ss_pred CCCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEc------cCCCceEEEeCC-CC
Confidence 5689999999999999999999999999989999999999998 3567787543210 012456789999 99
Q ss_pred CCceeEEEEEEecCCccCCCCCCCCCCCCCCCCCC
Q psy12060 852 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 886 (978)
Q Consensus 852 p~~~Y~~~v~A~N~~G~g~~s~~~~~~~t~~~~P~ 886 (978)
|++.|.|||+|.|..|.|++|..+..++|.+++|.
T Consensus 88 p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~P~ 122 (124)
T 1wis_A 88 PFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPS 122 (124)
T ss_dssp TTSEECCCCEEECSSCBCCCCCCCCCEECCCSSCC
T ss_pred CCCEEEEEEEEEECCccCCCcCCccceEcCCCCCC
Confidence 99999999999999999999998767888887774
No 500
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.54 E-value=2.3e-14 Score=145.89 Aligned_cols=160 Identities=19% Similarity=0.325 Sum_probs=107.8
Q ss_pred CCCCCCcEEEEEEEeecCCCeeEEEEc--------------CccCCCC----ceee-----ecccEEEeCCCCCCCCeEE
Q psy12060 410 APKAGDKVRLECVAFGYPVPSYNWTRR--------------GSPLPRN----AYFE-----NFNRILTIPNVKVEDQGEY 466 (978)
Q Consensus 410 ~v~~G~~~~l~C~~~g~p~~~v~W~~~--------------~~~l~~~----~~~~-----~~~~~L~i~~~~~~d~G~Y 466 (978)
.+.+|++++|.| ..+.+.+.|.|+|. +..+... .++. ....+|.|.+++.+|+|.|
T Consensus 13 ~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y 91 (245)
T 4ei6_B 13 IIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAVY 91 (245)
T ss_dssp EEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCEEE
T ss_pred EecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCEEE
Confidence 567999999999 66788889999992 1111000 1111 1234899999999999999
Q ss_pred EEEEEeCC----CceEEEEEEEEE------eeceeec-cCCcccccCCCceeEEEEeecC-CCC-eeEEeECCEECCCCC
Q psy12060 467 ICRASNDR----SALESSVTISIQ------AEPNFTI-PLTDKHMDNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSET 533 (978)
Q Consensus 467 ~C~a~n~~----g~~~~~~~l~V~------~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~-p~~-~i~W~~~g~~~~~~~ 533 (978)
.|.+.+.. ......+.|.|. .+|.+.+ .+....+.+|+.++|.|.+.|. |.+ .+.|+|+|..+....
T Consensus 92 ~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~ 171 (245)
T 4ei6_B 92 FCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV 171 (245)
T ss_dssp EEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred EEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCc
Confidence 99999632 223344567776 3555543 4444556779999999999984 444 899999999886431
Q ss_pred CCCC---------CCCcEEEecCEEEEEeCCCCCC-CeEEEEEEEcCCC
Q psy12060 534 LPLE---------DQDRYFIQDNVLTIRYLNPERD-PAMYQCRAKNQLK 572 (978)
Q Consensus 534 ~~~~---------~~~~~~~~~~~l~i~~~~~~~d-~G~Y~C~a~n~~g 572 (978)
.... ....+ .....|.|..... +| .|.|+|.|.|...
T Consensus 172 ~~~~~~~~~~~~~~~g~~-~~~s~L~i~~~~~-~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 172 CTDPQPLKEQPALNDSRY-ALSSRLRVSATFW-QNPRNHFRCQVQFYGL 218 (245)
T ss_dssp EECSSCEESSTTSTTCCE-EEEEEEEEEHHHH-SCTTCEEEEEEEECCB
T ss_pred ccccccccccccCCCCCE-EEEEEEEEcHHHh-ccCCCeEEEEEEECCC
Confidence 1000 12222 2234588887765 56 9999999998654
Done!